Pregenerated sensors for OVGP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074340Ensembl transcript IDs: ENSMUST00000000573.9, ENSMUST00000163626.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGTTGAATTGGATTCTGTCTGCACCAAGAGCTCATTCAATATATaGACAAGAGGGAAAGGGCCGTTGCCACAGAAAGTGCCCCTGACA | + |
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Preference number: 1 (lower is better) Translates to: GVELDSVCTKSSFNI*TRGKGPLPQKVPLT Trigger: TGTCAGGGGCACTTTCTGTGGCAACGGCCCTTTCCCTCTTGTTCATATATTGAATGAGCTCTTGGTGCAGACAGAATCCAATTCAACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCGAAGGGCAATTGAATTaGCAAATGGTTCCTATCAGT | + |
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Preference number: 2 (lower is better) Translates to: SLFNRKEIRRLPHGDFGAEGQLN*QMVPIS Trigger: ACTGATAGGAACCATTTGTCAATTCAATTGCCCTTC...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| 3UTR-3UTR TCA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACGGAGCTCATGATCTTTaGTTCATAACAGAGTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: HASSLFNRKEIRRLPHGDGAHDL*FITEFS Trigger: AGAAAACTCTGTTATGAATCAAAGATCATGAGCTCC...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| 3UTR TCA 72 bp | CAAGAGGGAAAGGGCCGTTGCCACAGAAAGTGCCCCTaGCATCGTCCATATCCAGTGTCCACACCATGGCCC | + |
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Preference number: 3 (lower is better) Translates to: QEGKGRCHRKCP*HRPYPVSTPWP Trigger: GGGCCATGGTGTGGACACTGGATATGGACGATGTCAGGGGCACTTTCTGTGGCAACGGCCCTTTCCCTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| 3UTR GCA 72 bp | CTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTaGCCCATGGTGACTTTGGTGCCAGCTTTGCCCCAT | + |
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Preference number: 3 (lower is better) Translates to: LPVYSIERRLGD*PMVTLVPALPH Trigger: ATGGGGCAAAGCTGGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| 3UTR TCA 72 bp | CACAGAAGATGTAAACCAAAATTGTGGCAAGGGGGTTaGATTGGATTCTGTCTGCACCAAGAGCTCATTCAA | + |
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Preference number: 3 (lower is better) Translates to: HRRCKPKLWQGG*IGFCLHQELIQ Trigger: TTGAATGAGCTCTTGGTGCAGACAGAATCCAATTCAACCCCCTTGCCACAATTTTGGTTTACATCTTCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR TCA 90 bp | AGGGAAAGGGCCGTTGCCACAGAAAGTGCCCCTGACATCGTCCATATCCAGTGTGCCGTGGGTGCTGAGTaGGCAGGGCCTCCCTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: RERAVATESAPDIVHIQCAVGAE*AGPPSR Trigger: TCGAGAGGGAGGCCCTGCTCACTCAGCACCCACGGC...ACACTGGATATGGACGATGTCAGGGGCACTTTCTGTGGCAACGGCCCTTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR CCA 90 bp | GCCGTTGCCACAGAAAGTGCCCCTGACATCGTCCATATCCAGTGTCCACACCATGATGGAGGCAGGGCCTaGCCGACTATGTGCCCAATT | + |
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Preference number: 4 (lower is better) Translates to: AVATESAPDIVHIQCPHHDGGRA*PTMCPI Trigger: AATTGGGCACATAGTCGGCCAGGCCCTGCCTCCATC...ATGGTGTGGACACTGGATATGGACGATGTCAGGGGCACTTTCTGTGGCAACGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR TCA 90 bp | CAAGAGCTCATTCAATATATGAACAAGAGGGAAAGGGCCGTTGCCACAGAAAGTAGCAGCCGTGGGTGCTaGGTGAGCAGGGCCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: QELIQYMNKRERAVATESSSRGC*VSRASL Trigger: GAGGGAGGCCCTGCTCACTCAGCACCCACGGCTGCT...ACTTTCTGTGGCAACGGCCCTTTCCCTCTTGTTCATATATTGAATGAGCTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR CCA 90 bp | GCTCATTCAATATATGAACAAGAGGGAAAGGGCCGTTGCCACAGAAAGTGCCCCAAGGGGTCCAGGTCATaGGGCATGATGGAGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: AHSIYEQEGKGRCHRKCPKGSRS*GMMEAG Trigger: CCCTGCCTCCATCATGCCCCATGACCTGGACCCCTT...GGGGCACTTTCTGTGGCAACGGCCCTTTCCCTCTTGTTCATATATTGAATGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR TCA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACGCCGTGGGTGCTGAGTaGGCAGGGCCTCCCTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: HASSLFNRKEIRRLPHGDAVGAE*AGPPSR Trigger: TCGAGAGGGAGGCCCTGCTCACTCAGCACCCACGGC...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR TCA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCAGCAGCCGTGGGTGCTaGGTGAGCAGGGCCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SLFNRKEIRRLPHGDFGASSRGC*VSRASL Trigger: GAGGGAGGCCCTGCTCACTCAGCACCCACGGCTGCT...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR GCA 90 bp | AGGGAAAGGGCCGTTGCCACAGAAAGTGCCCCTGACATCGTCCATATCCAGTGTGCCTGGCCGACTATGTaGCCAATTGGTGAAATAGCA | + |
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Preference number: 4 (lower is better) Translates to: RERAVATESAPDIVHIQCAWPTM*PIGEIA Trigger: TGCTATTTCACCAATTGGGCACATAGTCGGCCAGGC...ACACTGGATATGGACGATGTCAGGGGCACTTTCTGTGGCAACGGCCCTTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR CCA 90 bp | CAAGAGCTCATTCAATATATGAACAAGAGGGAAAGGGCCGTTGCCACAGAAAGTCGACAGCAGCAGCCGTaGGTGCTGAGTGAGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: QELIQYMNKRERAVATESRQQQP*VLSEQG Trigger: GCCCTGCTCACTCAGCACCCACGGCTGCTGCTGTCG...ACTTTCTGTGGCAACGGCCCTTTCCCTCTTGTTCATATATTGAATGAGCTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR CCA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACCGACAGCAGCAGCCGTaGGTGCTGAGTGAGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: HASSLFNRKEIRRLPHGDRQQQP*VLSEQG Trigger: GCCCTGCTCACTCAGCACCCACGGCTGCTGCTGTCG...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR TCA 90 bp | AGGGAAAGGGCCGTTGCCACAGAAAGTGCCCCTGACATCGTCCATATCCAGTGTCAGGAAGGATATGACTaGGTCAATAAACTTTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: RERAVATESAPDIVHIQCQEGYD*VNKLFP Trigger: CGGGAAAAGTTTATTGACTCAGTCATATCCTTCCTG...ACACTGGATATGGACGATGTCAGGGGCACTTTCTGTGGCAACGGCCCTTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR CCA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACAAGGGGTCCAGGTCATaGGGCATGATGGAGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: HASSLFNRKEIRRLPHGDKGSRS*GMMEAG Trigger: CCCTGCCTCCATCATGCCCCATGACCTGGACCCCTT...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CCA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACGATGGAGGCAGGGCCTaGCCGACTATGTGCCCAATT | + |
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Preference number: 4 (lower is better) Translates to: HASSLFNRKEIRRLPHGDDGGRA*PTMCPI Trigger: AATTGGGCACATAGTCGGCCAGGCCCTGCCTCCATC...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CCA 90 bp | CACCAAGAGCTCATTCAATATATGAACAAGAGGGAAAGGGCCGTTGCCACAGAACGTATGGATGATGCTTaGGATGCCAGAGACAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HQELIQYMNKRERAVATERMDDA*DARDSS Trigger: GCTGCTGTCTCTGGCATCCCAAGCATCATCCATACG...TTCTGTGGCAACGGCCCTTTCCCTCTTGTTCATATATTGAATGAGCTCTTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR TCA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCATGCCAGTGGTGGTCTaGGAAATGCCAGTGGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: SLFNRKEIRRLPHGDFGAMPVVV*EMPVVV Trigger: GACCACCACTGGCATTTCTCAGACCACCACTGGCAT...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR GCA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCGCCAAGAAGCCAGCCTaGTTGGTGTACTTCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SLFNRKEIRRLPHGDFGAAKKPA*LVYFPG Trigger: TCCTGGGAAGTACACCAAGCAGGCTGGCTTCTTGGC...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CCA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACCGTATGGATGATGCTTaGGATGCCAGAGACAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HASSLFNRKEIRRLPHGDRMDDA*DARDSS Trigger: GCTGCTGTCTCTGGCATCCCAAGCATCATCCATACG...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CCA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACAGAAGCCAGCCTGCTTaGTGTACTTCCCAGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: HASSLFNRKEIRRLPHGDRSQPA*CTSQEM Trigger: CATCTCCTGGGAAGTACACCAAGCAGGCTGGCTTCT...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| 3UTR CAA 72 bp | GCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATaGCCCCATGGTGACTTTGGTGCCAGCTTTGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: ASSLFNRKEIRR*PHGDFGASFAP Trigger: TGGGGCAAAGCTGGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR TCA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCAGATGCTGGTCCCATTaGGGCAGTCTGCAATCCATT | + |
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Preference number: 4 (lower is better) Translates to: SLFNRKEIRRLPHGDFGARCWSH*GSLQSI Trigger: AATGGATTGCAGACTGCCTCAATGGGACCAGCATCT...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR GCA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCGCCTGGCCGACTATGTaGCCAATTGGTGAAATAGCA | + |
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Preference number: 4 (lower is better) Translates to: SLFNRKEIRRLPHGDFGAAWPTM*PIGEIA Trigger: TGCTATTTCACCAATTGGGCACATAGTCGGCCAGGC...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CCA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCGATCCATTGTGGCTGTaGTCTCTGCCTCATTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: SLFNRKEIRRLPHGDFGADPLWL*SLPHLP Trigger: AGGCAAATGAGGCAGAGACCACAGCCACAATGGATC...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR TCA 90 bp | AGAGCTCATTCAATATATGAACAAGAGGGAAAGGGCCGTTGCCACAGAAAGTGCCTGATTGTTGCTCATTaGGGCAAAGGCAAATATCAG | + |
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Preference number: 4 (lower is better) Translates to: RAHSIYEQEGKGRCHRKCLIVAH*GKGKYQ Trigger: CTGATATTTGCCTTTGCCTCAATGAGCAACAATCAG...GCACTTTCTGTGGCAACGGCCCTTTCCCTCTTGTTCATATATTGAATGAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR GCA 90 bp | AGAGCTCATTCAATATATGAACAAGAGGGAAAGGGCCGTTGCCACAGAAAGTGCAAGGCAAATATCAGATaGGTACAAAGAAAGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RAHSIYEQEGKGRCHRKCKANIR*VQRKGS Trigger: GGACCCCTTTCTTTGTACGCATCTGATATTTGCCTT...GCACTTTCTGTGGCAACGGCCCTTTCCCTCTTGTTCATATATTGAATGAGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR GCA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCGGTCTCTGCCTCATTTaGCTGTGTCTGGACTATTAC | + |
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Preference number: 4 (lower is better) Translates to: SLFNRKEIRRLPHGDFGAGLCLI*LCLDYY Trigger: GTAATAGTCCAGACACAGGCAAATGAGGCAGAGACC...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CCA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCTTTTCATACCTTCTGTaGACCTCGGTGGTCATAGCC | + |
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Preference number: 4 (lower is better) Translates to: SLFNRKEIRRLPHGDFGAFSYLL*TSVVIA Trigger: GGCTATGACCACCGAGGTCCACAGAAGGTATGAAAA...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR TCA 90 bp | TTCTGTCTGCACCAAGAGCTCATTCAATATATGAACAAGAGGGAAAGGGCCGTTTATGTGCCCAATTGGTaGAATAGCACACCAGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: FCLHQELIQYMNKRERAVYVPNW*NSTPVC Trigger: ACAAACTGGTGTGCTATTTCACCAATTGGGCACATA...AACGGCCCTTTCCCTCTTGTTCATATATTGAATGAGCTCTTGGTGCAGACAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR TCA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTCTTGGCCACAATCTaGTTGTTGCTCATTGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: HASSLFNRKEIRRLPHGDFLATI*LLLIEA Trigger: TGCCTCAATGAGCAACAATCAGATTGTGGCCAAGAA...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR TCA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACAGCTCATTCAATATATaGACAAGAGGGAAAGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: HASSLFNRKEIRRLPHGDSSFNI*TRGKGP Trigger: CGGCCCTTTCCCTCTTGTTCATATATTGAATGAGCT...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CCA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCCATCCTGCAGATTCTTaGCCACAATCTGATTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SLFNRKEIRRLPHGDFGAHPADS*PQSDCC Trigger: GCAACAATCAGATTGTGGCCAAGAATCTGCAGGATG...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR TCA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCTATGTGCCCAATTGGTaGAATAGCACACCAGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: SLFNRKEIRRLPHGDFGAYVPNW*NSTPVC Trigger: ACAAACTGGTGTGCTATTTCACCAATTGGGCACATA...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR TCA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACCTGATTGTTGCTCATTaGGGCAAAGGCAAATATCAG | + |
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Preference number: 4 (lower is better) Translates to: HASSLFNRKEIRRLPHGDLIVAH*GKGKYQ Trigger: CTGATATTTGCCTTTGCCTCAATGAGCAACAATCAG...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR TCA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACCAGGAAGGATATGACTaGGTCAATAAACTTTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: HASSLFNRKEIRRLPHGDQEGYD*VNKLFP Trigger: CGGGAAAAGTTTATTGACTCAGTCATATCCTTCCTG...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR GCA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCAAGGCAAATATCAGATaGGTACAAAGAAAGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SLFNRKEIRRLPHGDFGAKANIR*VQRKGS Trigger: GGACCCCTTTCTTTGTACGCATCTGATATTTGCCTT...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CCA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTCATTTGCCTGTGTCTaGACTATTACTGTCATCCCA | + |
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Preference number: 4 (lower is better) Translates to: HASSLFNRKEIRRLPHGDSFACV*TITVIP Trigger: TGGGATGACAGTAATAGTCCAGACACAGGCAAATGA...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR GCA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCGAATTGGATTCTGTCTaGACCAAGAGCTCATTCAAT | + |
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Preference number: 4 (lower is better) Translates to: SLFNRKEIRRLPHGDFGAELDSV*TKSSFN Trigger: ATTGAATGAGCTCTTGGTGCAGACAGAATCCAATTC...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CCA 90 bp | TTCTGTCTGCACCAAGAGCTCATTCAATATATGAACAAGAGGGAAAGGGCCGTTGAGTTTGTTGAACTCTaGATAGAGAACGTTTTCATC | + |
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Preference number: 4 (lower is better) Translates to: FCLHQELIQYMNKRERAVEFVEL*IENVFI Trigger: GATGAAAACGTTCTCTATCCAGAGTTCAACAAACTC...AACGGCCCTTTCCCTCTTGTTCATATATTGAATGAGCTCTTGGTGCAGACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR CCA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTCTTTATGGTATCAGTaGTCAATACCTCTGTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: HASSLFNRKEIRRLPHGDSLWYQ*SIPLSR Trigger: CCTTGACAGAGGTATTGACCACTGATACCATAAAGA...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CCA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCCATCGTGTTATTTTCTaGAGTTACAGCATGCTTTCG | + |
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Preference number: 4 (lower is better) Translates to: SLFNRKEIRRLPHGDFGAHRVIF*SYSMLS Trigger: CGAAAGCATGCTGTAACTCCAGAAAATAACACGATG...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CCA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCGAGTTTGTTGAACTCTaGATAGAGAACGTTTTCATC | + |
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Preference number: 4 (lower is better) Translates to: SLFNRKEIRRLPHGDFGAEFVEL*IENVFI Trigger: GATGAAAACGTTCTCTATCCAGAGTTCAACAAACTC...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS CCA 90 bp | GGACAAAGGAACAAACCTCATAGTAAGCCAAGAAGCCAGCCTGCTTaGTGTACTTCCCAGGAGATGCTGGTCCCATTGAGGCAGTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: GQRNKPHSKPRSQPA*CTSQEMLVPLRQSA Trigger: TGCAGACTGCCTCAATGGGACCAGCATCTCCTGGGAAGTACACCAAGCAGGCTGGCTTCTTGGCTTACTATGAGGTTTGTTCCTTTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CAA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACAGAGGGAAAGGGCCGTaGCCACAGAAAGTGCCCCTG | + |
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Preference number: 5 (lower is better) Translates to: HASSLFNRKEIRRLPHGDRGKGP*PQKVPL Trigger: CAGGGGCACTTTCTGTGGCAACGGCCCTTTCCCTCT...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS TCA 90 bp | GAAGCCAGCCTGCTTGGTGTACTTCCCAGGAGATGCTGGTCCCATTaGGGCAGTCTGCAATCCATTCTTAGATTCTTTGAGGAGGTAAAA | + |
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Preference number: 5 (lower is better) Translates to: EASLLGVLPRRCWSH*GSLQSILRFFEEVK Trigger: TTTTACCTCCTCAAAGAATCTAAGAATGGATTGCAGACTGCCTCAATGGGACCAGCATCTCCTGGGAAGTACACCAAGCAGGCTGGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS TCA 90 bp | AGTGGTCAATACCTCTGTCAAGGCTGTATTCTCAGAGCCAGGTCCTaGGGCATTCACAGAAGATGTAAACCAAAATTGTGGCAAGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: SGQYLCQGCILRARS*GIHRRCKPKLWQGG Trigger: ACCCCCTTGCCACAATTTTGGTTTACATCTTCTGTGAATGCCTCAGGACCTGGCTCTGAGAATACAGCCTTGACAGAGGTATTGACCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS TCA 90 bp | ATCTGCGGGTGTCCCAAGCTTTCTCCAGTAATTCATAGCATATGCTaGAGATTTGGAGTCTTCGGGAAGGGAGAACAGAGGACTATTGTG | + |
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Preference number: 5 (lower is better) Translates to: ICGCPKLSPVIHSIC*RFGVFGKGEQRTIV Trigger: CACAATAGTCCTCTGTTCTCCCTTCCCGAAGACTCCAAATCTTCAGCATATGCTATGAATTACTGGAGAAAGCTTGGGACACCCGCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CAA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACGAGATGCTGGTCCCATaGAGGCAGTCTGCAATCCAT | + |
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Preference number: 5 (lower is better) Translates to: HASSLFNRKEIRRLPHGDEMLVP*RQSAIH Trigger: ATGGATTGCAGACTGCCTCAATGGGACCAGCATCTC...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CAA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACAAGAAGCCAGCCTGCTaGGTGTACTTCCCAGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: HASSLFNRKEIRRLPHGDKKPAC*VYFPGD Trigger: ATCTCCTGGGAAGTACACCAAGCAGGCTGGCTTCTT...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CAA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCCAGACTGATGATCCATaGTGGCTGTGGTCTCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: SLFNRKEIRRLPHGDFGAQTDDP*WLWSLP Trigger: AGGCAGAGACCACAGCCACAATGGATCATCAGTCTG...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CAA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACGCATATGCTGAAGATTaGGAGTCTTCGGGAAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: HASSLFNRKEIRRLPHGDAYAED*ESSGRE Trigger: CTCCCTTCCCGAAGACTCCAAATCTTCAGCATATGC...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS TCA 90 bp | GTTTTCATCCTGCAGATTCTTGGCCACAATCTGATTGTTGCTCATTaGGGCAAAGGCAAATATCAGATGCGTACAAAGAAAGGGGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: VFILQILGHNLIVAH*GKGKYQMRTKKGVQ Trigger: CTGGACCCCTTTCTTTGTACGCATCTGATATTTGCCTTTGCCTCAATGAGCAACAATCAGATTGTGGCCAAGAATCTGCAGGATGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000573.9 ENSMUST00000163626.2 |
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| CDS CCA 90 bp | CAGTGTTTTCAGCTCCCTGTTCCTTTCCTTGAGTTTGTTGAACTCTaGATAGAGAACGTTTTCATCCTGCAGATTCTTGGCCACAATCTG | + |
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Preference number: 5 (lower is better) Translates to: QCFQLPVPFLEFVEL*IENVFILQILGHNL Trigger: CAGATTGTGGCCAAGAATCTGCAGGATGAAAACGTTCTCTATCCAGAGTTCAACAAACTCAAGGAAAGGAACAGGGAGCTGAAAACACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000573.9 ENSMUST00000163626.2 |
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| CDS-3UTR CAA 90 bp | CAAGAGCTCATTCAATATATGAACAAGAGGGAAAGGGCCGTTGCCACAGAAAGTTCCCTGTTCCTTTCCTaGAGTTTGTTGAACTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: QELIQYMNKRERAVATESSLFLS*SLLNSG Trigger: TCCAGAGTTCAACAAACTCAAGGAAAGGAACAGGGA...ACTTTCTGTGGCAACGGCCCTTTCCCTCTTGTTCATATATTGAATGAGCTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR CAA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCTGGTCTCTGCCTCATTaGCCTGTGTCTGGACTATTA | + |
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Preference number: 5 (lower is better) Translates to: SLFNRKEIRRLPHGDFGAWSLPH*PVSGLL Trigger: TAATAGTCCAGACACAGGCAAATGAGGCAGAGACCA...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CAA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCTCCCTGTTCCTTTCCTaGAGTTTGTTGAACTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: SLFNRKEIRRLPHGDFGASLFLS*SLLNSG Trigger: TCCAGAGTTCAACAAACTCAAGGAAAGGAACAGGGA...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CAA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCATAAACTTTTCCCGGTaGGCAAGTGTGGAGAGCATA | + |
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Preference number: 5 (lower is better) Translates to: SLFNRKEIRRLPHGDFGAINFSR*ASVESI Trigger: TATGCTCTCCACACTTGCCAACCGGGAAAAGTTTAT...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS GCA 90 bp | AGAGAACGTTTTCATCCTGCAGATTCTTGGCCACAATCTGATTGTTaGTCATTGAGGCAAAGGCAAATATCAGATGCGTACAAAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: RERFHPADSWPQSDC*SLRQRQISDAYKER Trigger: CCTTTCTTTGTACGCATCTGATATTTGCCTTTGCCTCAATGAGCAACAATCAGATTGTGGCCAAGAATCTGCAGGATGAAAACGTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000573.9 ENSMUST00000163626.2 |
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| CDS-3UTR CAA 90 bp | ATTCTGTCTGCACCAAGAGCTCATTCAATATATGAACAAGAGGGAAAGGGCCGTTCTGATTGTTGCTCATaGAGGCAAAGGCAAATATCA | + |
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Preference number: 5 (lower is better) Translates to: ILSAPRAHSIYEQEGKGRSDCCS*RQRQIS Trigger: TGATATTTGCCTTTGCCTCAATGAGCAACAATCAGA...ACGGCCCTTTCCCTCTTGTTCATATATTGAATGAGCTCTTGGTGCAGACAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR CAA 90 bp | AGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACTTTGGTGCCTCTGATTGTTGCTCATaGAGGCAAAGGCAAATATCA | + |
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Preference number: 5 (lower is better) Translates to: SLFNRKEIRRLPHGDFGASDCCS*RQRQIS Trigger: TGATATTTGCCTTTGCCTCAATGAGCAACAATCAGA...GGCACCAAAGTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS-3UTR CAA 90 bp | CAAGAGCTCATTCAATATATGAACAAGAGGGAAAGGGCCGTTGCCACAGAAAGTAGCATACGGGACATATaGATAATCAATCCAGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: QELIQYMNKRERAVATESSIRDI*IINPVF Trigger: AAACACTGGATTGATTATCAATATGTCCCGTATGCT...ACTTTCTGTGGCAACGGCCCTTTCCCTCTTGTTCATATATTGAATGAGCTCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS-3UTR CAA 90 bp | CATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGGAGATTGCCCCATGGTGACAGCATACGGGACATATaGATAATCAATCCAGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: HASSLFNRKEIRRLPHGDSIRDI*IINPVF Trigger: AAACACTGGATTGATTATCAATATGTCCCGTATGCT...GTCACCATGGGGCAATCTCCTAATCTCCTTTCTATTGAATAAACTGGAAGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS CCA 72 bp | TGGGATGCCAGAGACAGCAGCCGACAGCAGCAGCCGTaGGTGCTGAGTGAGCAGGGCCTCCCTCTCGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: WDARDSSRQQQP*VLSEQGLPLEG Trigger: GCCTTCGAGAGGGAGGCCCTGCTCACTCAGCACCCACGGCTGCTGCTGTCGGCTGCTGTCTCTGGCATCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000573.9 ENSMUST00000163626.2 |
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| CDS TCA 72 bp | GCCTTCCTAAAAGGAGCGCATCATAAGACGTATGGATaGTGCTTGGGATGCCAGAGACAGCAGCCGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: AFLKGAHHKTYG*CLGCQRQQPTA Trigger: TGCTGTCGGCTGCTGTCTCTGGCATCCCAAGCATCATCCATACGTCTTATGATGCGCTCCTTTTAGGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS TCA 72 bp | ACCTTCCTAAAAGGAGCGCATCATAAGACGTATGGATaGTGCTTGGGATGCCAGAGACAGCAGCCGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: TFLKGAHHKTYG*CLGCQRQQPTA Trigger: TGCTGTCGGCTGCTGTCTCTGGCATCCCAAGCATCATCCATACGTCTTATGATGCGCTCCTTTTAGGAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163626.2 |
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| CDS GCA 72 bp | CTGATGATCCATTGTGGCTGTGGTCTCTGCCTCATTTaGCTGTGTCTGGACTATTACTGTCATCCCAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: LMIHCGCGLCLI*LCLDYYCHPRG Trigger: ACCCCTGGGATGACAGTAATAGTCCAGACACAGGCAAATGAGGCAGAGACCACAGCCACAATGGATCATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS CAA 72 bp | ACTGATGATCCATTGTGGCTGTGGTCTCTGCCTCATTaGCCTGTGTCTGGACTATTACTGTCATCCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: TDDPLWLWSLPH*PVSGLLLSSQG Trigger: CCCCTGGGATGACAGTAATAGTCCAGACACAGGCAAATGAGGCAGAGACCACAGCCACAATGGATCATCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS TCA 72 bp | ATGTCAGTGGTGGTCTTAGAAATGCCAGTGGTGGTCTaGGAAATGCCAGTGGTGGTCTTAGAAATGCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: MSVVVLEMPVVV*EMPVVVLEMPV Trigger: CACTGGCATTTCTAAGACCACCACTGGCATTTCTCAGACCACCACTGGCATTTCTAAGACCACCACTGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS GCA 72 bp | TCAGCAGCCATCGTGTTATTTTCTGGAGTTACAGCATaGTTTCGAGGAGATGCTGTTCCTCCAGGGGTTACA | + |
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Preference number: 6 (lower is better) Translates to: SAAIVLFSGVTA*FRGDAVPPGVT Trigger: TGTAACCCCTGGAGGAACAGCATCTCCTCGAAAGCATGCTGTAACTCCAGAAAATAACACGATGGCTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS CAA 90 bp | TGTATTCTCAGGAAGGATATGACTGAGTCAATAAACTTTTCCCGGTaGGCAAGTGTGGAGAGCATAGCGGTGAACCGTGATGTGCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: CILRKDMTESINFSR*ASVESIAVNRDVPK Trigger: CTTCGGCACATCACGGTTCACCGCTATGCTCTCCACACTTGCCAACCGGGAAAAGTTTATTGACTCAGTCATATCCTTCCTGAGAATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000573.9 ENSMUST00000163626.2 |
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| CDS GCA 72 bp | GTTATTTTCTGGAGTTACAGCATGCTTTCGAGGAGATaGTGTTCCTCCAGGGGTTACAGATCCATCACTAGG | + |
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Preference number: 6 (lower is better) Translates to: VIFWSYSMLSRR*CSSRGYRSITR Trigger: CCTAGTGATGGATCTGTAACCCCTGGAGGAACAGCATCTCCTCGAAAGCATGCTGTAACTCCAGAAAATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS CAA 72 bp | AGGAAGGATATGACTGAGTCAATAAACTTTTCCCGGTaGGCAAGTGTGGAGAGCATAGCGGTGAACCGTGAT | + |
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Preference number: 6 (lower is better) Translates to: RKDMTESINFSR*ASVESIAVNRD Trigger: ATCACGGTTCACCGCTATGCTCTCCACACTTGCCAACCGGGAAAAGTTTATTGACTCAGTCATATCCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000573.9 ENSMUST00000163626.2 |
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| CDS TCA 72 bp | TGTCCCAAGCTTTCTCCAGTAATTCATAGCATATGCTaGAGATTTGGAGTCTTCGGGAAGGGAGAACAGAGG | + |
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Preference number: 6 (lower is better) Translates to: CPKLSPVIHSIC*RFGVFGKGEQR Trigger: CCTCTGTTCTCCCTTCCCGAAGACTCCAAATCTTCAGCATATGCTATGAATTACTGGAGAAAGCTTGGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS GCA 72 bp | ACGTCCATAGGTGGGGAAACCCATAATAAGTTTATCTaGGGGTGTCCCAAGCTTTCTCCAGTAATTCATAGC | + |
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Preference number: 6 (lower is better) Translates to: TSIGGETHNKFI*GCPKLSPVIHS Trigger: GCTATGAATTACTGGAGAAAGCTTGGGACACCCGCAGATAAACTTATTATGGGTTTCCCCACCTATGGACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS CCA 72 bp | CAGCTCCCTGTTCCTTTCCTTGAGTTTGTTGAACTCTaGATAGAGAACGTTTTCATCCTGCAGATTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: QLPVPFLEFVEL*IENVFILQILG Trigger: GCCAAGAATCTGCAGGATGAAAACGTTCTCTATCCAGAGTTCAACAAACTCAAGGAAAGGAACAGGGAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000573.9 ENSMUST00000163626.2 |
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| CDS CCA 72 bp | CATAGTTTTTGCCTCAGCAGCCATCGTGTTATTTTCTaGAGTTACAGCATGCTTTCGAGGAGATGCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: HSFCLSSHRVIF*SYSMLSRRCCS Trigger: GGAACAGCATCTCCTCGAAAGCATGCTGTAACTCCAGAAAATAACACGATGGCTGCTGAGGCAAAAACTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS CAA 90 bp | CGTTTTCATCCTGCAGATTCTTGGCCACAATCTGATTGTTGCTCATaGAGGCAAAGGCAAATATCAGATGCGTACAAAGAAAGGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RFHPADSWPQSDCCS*RQRQISDAYKERGP Trigger: TGGACCCCTTTCTTTGTACGCATCTGATATTTGCCTTTGCCTCAATGAGCAACAATCAGATTGTGGCCAAGAATCTGCAGGATGAAAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000573.9 ENSMUST00000163626.2 |
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| CDS CCA 72 bp | ACTCTGGATAGAGAACGTTTTCATCCTGCAGATTCTTaGCCACAATCTGATTGTTGCTCATTGAGGCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: TLDRERFHPADS*PQSDCCSLRQR Trigger: CCTTTGCCTCAATGAGCAACAATCAGATTGTGGCCAAGAATCTGCAGGATGAAAACGTTCTCTATCCAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000573.9 ENSMUST00000163626.2 |
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| CDS CAA 72 bp | GATTTGGAGTCTTCGGGAAGGGAGAACAGAGGACTATaGTGTCCTGTAAACTTTTCCCAACTTCCATGTAAG | + |
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Preference number: 6 (lower is better) Translates to: DLESSGRENRGL*CPVNFSQLPCK Trigger: CTTACATGGAAGTTGGGAAAAGTTTACAGGACACAATAGTCCTCTGTTCTCCCTTCCCGAAGACTCCAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000573.9 |
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| CDS CAA 72 bp | CCTGCAGATTCTTGGCCACAATCTGATTGTTGCTCATaGAGGCAAAGGCAAATATCAGATGCGTACAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: PADSWPQSDCCS*RQRQISDAYKE Trigger: TTCTTTGTACGCATCTGATATTTGCCTTTGCCTCAATGAGCAACAATCAGATTGTGGCCAAGAATCTGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000573.9 ENSMUST00000163626.2 |
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