Pregenerated sensors for OVCH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048236Ensembl transcript IDs: ENSMUST00000106755.3
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCAGGCTGCTGCAAGACTTGTaGGAGCCTGCCACCTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FIVSHFWRKEGKGQCVSRLLQDL*EPATFG Trigger: TCCGAAGGTGGCAGGCTCCCACAAGTCTTGCAGCAG...CCTGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CCA 90 bp | TTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCAGGAAGGAAATGTCAGCCTaGAAGCCCCTGGCAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIVSHFWRKEGKGQCVSRKEMSA*KPLAVP Trigger: TGGCACTGCCAGGGGCTTCCAGGCTGACATTTCCTT...CCTGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGCCTCCTGAATCTCCCTaGCAAGCATCTCTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRDLLSHISGGKRAKASVPPESP*QASLPP Trigger: TGGAGGGAGAGATGCTTGTCAGGGAGATTCAGGAGG...CACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCTCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGAGGGCAAAGGCCAGTGTGTCAGCAGGTTGATTCTTTCTGAGCGTTGCTGGAACTGGAGCCAATaGGAATGGATGAAGGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKEGKGQCVSRLILSERCWNWSQ*EWMKGD Trigger: ATCTCCCTTCATCCATTCTCATTGGCTCCAGTTCCA...GCAACGCTCAGAAAGAATCAACCTGCTGACACACTGGCCTTTGCCCTCTTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR GCA 90 bp | AGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCAGGCTTTCTGGGAAGTaGAGCTCTCCCTCAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RFIVSHFWRKEGKGQCVSRLSGK*SSPSDP Trigger: TGGGTCTGAGGGAGAGCTGCACTTCCCAGAAAGCCT...GCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CCA 90 bp | AGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCGTGTTCTCCTGGCTCTaGAAGACACACAGGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RFIVSHFWRKEGKGQCVSVFSWL*KTHRPH Trigger: GTGAGGCCTGTGTGTCTTCCAGAGCCAGGAGAACAC...GCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CCA 90 bp | ATAGCAGAGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGCAGGTGGAGGCTTTCTaGGAAGTGCAGCTCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IAEIYCLTFLEERGQRPVQVEAF*EVQLSL Trigger: GAGGGAGAGCTGCACTTCCCAGAAAGCCTCCACCTG...CACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCTCTGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR TCA 90 bp | GATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCATGTGATGACCCACTGTaGAGAGATGATGGTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLLSHISGGKRAKASVSACDDPL*RDDGPS Trigger: GGAGGGACCATCATCTCTTCACAGTGGGTCATCACA...TGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR TCA 90 bp | TTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCAGGTCAGTCTGGATATGTTTaGGGATCCAGGGAAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSHISGGKRAKASVSAGQSGYV*GSREAL Trigger: GAGTGCTTCCCTGGATCCTCAAACATATCCAGACTG...ACCTGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CCA 90 bp | GAGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGTCTCCTGGCTCGGCTTaGCTCAAGTCATGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EIYCLTFLEERGQRPVCQSPGSA*LKSCSP Trigger: TGGAGAACATGACTTGAGCCAAGCCGAGCCAGGAGA...CTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CCA 90 bp | AAAGAGGGCAAAGGCCAGTGTGTCAGCAGGTTGATTCTTTCTGAGCGTTGCAATAACTCAGCACAGGGCTaGGTATCACATAGTCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KEGKGQCVSRLILSERCNNSAQG*VSHSRR Trigger: TCTGCGACTATGTGATACCCAGCCCTGTGCTGAGTT...ATTGCAACGCTCAGAAAGAATCAACCTGCTGACACACTGGCCTTTGCCCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGGCAAAGGCCAGTGTGTCAGCAGGTTGATTCTTTCTGAGCGTTGCAATGACCATCAGGCTCACTaGATAAAGCTTTGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEGKGQCVSRLILSERCNDHQAH*IKLWCS Trigger: AGAGCACCAAAGCTTTATGCAGTGAGCCTGATGGTC...ATTGCAACGCTCAGAAAGAATCAACCTGCTGACACACTGGCCTTTGCCCTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CCA 90 bp | AGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCGAACCCTTTTCCACCTaGCTTCCTCCAACAATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RFIVSHFWRKEGKGQCVSEPFST*LPPTMR Trigger: TCGCATTGTTGGAGGAAGCCAGGTGGAAAAGGGTTC...GCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CCA 90 bp | ATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCAGCATATGCATGTCCTCTaGAACCAGGAAGGTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IYCLTFLEERGQRPVCQQHMHVL*NQEGPD Trigger: GTCTGGACCTTCCTGGTTCCAGAGGACATGCATATG...CTGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR TCA 90 bp | GAGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGGAAAGGGTTTCAGAATaGCCTTGTTCCAAGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: EIYCLTFLEERGQRPVCQERVSE*PCSKQT Trigger: GGTCTGCTTGGAACAAGGTCATTCTGAAACCCTTTC...CTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR GCA 90 bp | GATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCACAAGCGACCCCAGCCTaGAGTTGTACAAATAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: DLLSHISGGKRAKASVSAQATPA*SCTNKS Trigger: GGATTTATTTGTACAACTGCAGGCTGGGGTCGCTTG...TGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR GCA 90 bp | TTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCAGGTAGACACACAGTTGCTTaGTCTCATAGTACAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSHISGGKRAKASVSAGRHTVA*SHSTGG Trigger: TCCACCTGTACTATGAGAGCAAGCAACTGTGTGTCT...ACCTGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CCA 90 bp | GAGGGCAAAGGCCAGTGTGTCAGCAGGTTGATTCTTTCTGAGCGTTGCAATGCTGTCTTCTTCGTATGGTaGTTTTGTATGTGTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGKGQCVSRLILSERCNAVFFVW*FCMCVS Trigger: AGAGACACACATACAAAACCACCATACGAAGAAGAC...AGCATTGCAACGCTCAGAAAGAATCAACCTGCTGACACACTGGCCTTTGCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR TCA 90 bp | ATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCAGGCCAATGAGAATGGATaGAGGGAGATTTTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: IYCLTFLEERGQRPVCQQANENG*REIFST Trigger: TGTGGAGAAAATCTCCCTTCATCCATTCTCATTGGC...CTGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR GCA 90 bp | CAGAGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCGGCTTAACCAAACTCTaGCCACAGTCAGGATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRFIVSHFWRKEGKGQCVGLTKL*PQSGFL Trigger: AAGAAATCCTGACTGTGGGCAGAGTTTGGTTAAGCC...GACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR GCA 90 bp | ATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCAGGTCCCTCCACAGATGTaGTTCTGCTTTTGTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IYCLTFLEERGQRPVCQQVPPQM*FCFCFR Trigger: TCTGAAACAAAAGCAGAAGCACATCTGTGGAGGGAC...CTGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR GCA 90 bp | AATAGCAGAGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGGAAGCCCCTGGCAGTaGCATTTTCATCTGATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NSRDLLSHISGGKRAKASGSPWQ*HFHLIG Trigger: TCCAATCAGATGAAAATGGCACTGCCAGGGGCTTCC...ACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCTCTGCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CCA 90 bp | CAGAGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCCTCCTGAGTCAAAATTaGCAGGTTTACCTGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QRFIVSHFWRKEGKGQCVLLSQN*QVYLLQ Trigger: TTGCAGCAGGTAAACCTGCCAATTTTGACTCAGGAG...GACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR TCA 90 bp | GATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCACCAAGTGTGACAAATTaGGCAACATATGCATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLLSHISGGKRAKASVSAPSVTN*ATYACP Trigger: AGGACATGCATATGTTGCTCAATTTGTCACACTTGG...TGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGACAAACTGTCCAAATTaGAAGGTTCCAGCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRDLLSHISGGKRAKASVTNCPN*KVPAIF Trigger: GAAGATGGCTGGAACCTTCCAATTTGGACAGTTTGT...CACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCTCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CCA 90 bp | AAAGAGGGCAAAGGCCAGTGTGTCAGCAGGTTGATTCTTTCTGAGCGTTGCAATGATGTCTTCTTCGTATaGTGGTTTTGTATGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KEGKGQCVSRLILSERCNDVFFV*WFCMCV Trigger: GACACACATACAAAACCACCATACGAAGAAGACATC...ATTGCAACGCTCAGAAAGAATCAACCTGCTGACACACTGGCCTTTGCCCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR TCA 90 bp | AAAGAGGGCAAAGGCCAGTGTGTCAGCAGGTTGATTCTTTCTGAGCGTTGCAATCTCTATATCCAAGTGTaGCAAATTGAGCAACATATG | + |
|
Preference number: 4 (lower is better) Translates to: KEGKGQCVSRLILSERCNLYIQV*QIEQHM Trigger: CATATGTTGCTCAATTTGTCACACTTGGATATAGAG...ATTGCAACGCTCAGAAAGAATCAACCTGCTGACACACTGGCCTTTGCCCTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR GCA 90 bp | ATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCAGATTCCAGGAGATCCTTaGTCTTTCTTTCTTGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: IYCLTFLEERGQRPVCQQIPGDP*SFFLAL Trigger: CAATGCAAGAAAGAAAGAGCAAGGATCTCCTGGAAT...CTGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR GCA 90 bp | CAGAGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCATGTGTGTCTCTCTCTaGATCGAAAATTTCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRFIVSHFWRKEGKGQCVMCVSL*IENFHC Trigger: GCAATGGAAATTTTCGATGCAGAGAGAGACACACAT...GACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CCA 90 bp | GATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCAAGTCAGGATTTCTTATaGAGGAAAGGGTTTCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: DLLSHISGGKRAKASVSASQDFL*RKGFQN Trigger: ATTCTGAAACCCTTTCCTCCATAAGAAATCCTGACT...TGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR GCA 90 bp | CAGAGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCGTATCTCGGCTTAAGTaGTTTATAGGTGAGATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRFIVSHFWRKEGKGQCVVSRLK*FIGEIK Trigger: TTTAATCTCACCTATAAAGCACTTAAGCCGAGATAC...GACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CCA 90 bp | CCAGACACACAGTTGCTTGCTCTCATAGTACAGGTGGAGGCTTTCTaGGAAGTGCAGCTCTCCCTCAGACCCACTGATGAGACCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PDTQLLALIVQVEAF*EVQLSLRPTDETIR Trigger: CCTGATGGTCTCATCAGTGGGTCTGAGGGAGAGCTGCACTTCCCAGAAAGCCTCCACCTGTACTATGAGAGCAAGCAACTGTGTGTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS GCA 90 bp | CAAGACTTGTGGGAGCCTGCCACCTTCGGACAAGCGACCCCAGCCTaGAGTTGTACAAATAAATCCAGCATTAAAGTGTTCTCCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QDLWEPATFGQATPA*SCTNKSSIKVFSWL Trigger: GAGCCAGGAGAACACTTTAATGCTGGATTTATTTGTACAACTGCAGGCTGGGGTCGCTTGTCCGAAGGTGGCAGGCTCCCACAAGTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS GCA 90 bp | GTGGAGAACTGCGGGTGTATGATGATGGTTTCAATGGCAAGTGTTTaGTCTCCTGGCTCGGCTTGGCTCAAGTCATGTTCTCCAGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VENCGCMMMVSMASV*SPGSAWLKSCSPAV Trigger: AACTGCTGGAGAACATGACTTGAGCCAAGCCGAGCCAGGAGAGCAAACACTTGCCATTGAAACCATCATCATACACCCGCAGTTCTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CAA 90 bp | GAGGGCAAAGGCCAGTGTGTCAGCAGGTTGATTCTTTCTGAGCGTTGCAATGCTCCAGTCTGGATATGTTaGAGGATCCAGGGAAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: EGKGQCVSRLILSERCNAPVWIC*RIQGST Trigger: AGTGCTTCCCTGGATCCTCAAACATATCCAGACTGG...AGCATTGCAACGCTCAGAAAGAATCAACCTGCTGACACACTGGCCTTTGCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CCA 90 bp | GGCTCACTGCATAAAGCTTTGGTGCTCTTCCTTCGATGGCCAGTCTaGATATGTTTGAGGATCCAGGGAAGCACTCTCCTAAGATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSLHKALVLFLRWPV*ICLRIQGSTLLRSV Trigger: CACAGATCTTAGGAGAGTGCTTCCCTGGATCCTCAAACATATCCAGACTGGCCATCGAAGGAAGAGCACCAAAGCTTTATGCAGTGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CCA 90 bp | AGACCATCAGGCTCACTGCATAAAGCTTTGGTGCTCTTCCTTCGATaGCCAGTCTGGATATGTTTGAGGATCCAGGGAAGCACTCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: RPSGSLHKALVLFLR*PVWICLRIQGSTLL Trigger: TAGGAGAGTGCTTCCCTGGATCCTCAAACATATCCAGACTGGCCATCGAAGGAAGAGCACCAAAGCTTTATGCAGTGAGCCTGATGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS TCA 90 bp | GTAATGGGATTCTTTAAGGTCAACAGAACGGCCTCACATTCCTCCTaGGTCAAAATTGGCAGGTTTACCTGCTGCAAGACTTGTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VMGFFKVNRTASHSS*VKIGRFTCCKTCGS Trigger: GCTCCCACAAGTCTTGCAGCAGGTAAACCTGCCAATTTTGACTCAGGAGGAATGTGAGGCCGTTCTGTTGACCTTAAAGAATCCCATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CAA 90 bp | TTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCAGGGGTTTCAGAATGACCTaGTTCCAAGCAGACCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: FIVSHFWRKEGKGQCVSRGFRMT*FQADHS Trigger: GGAATGGTCTGCTTGGAACAAGGTCATTCTGAAACC...CCTGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGAGGGCAAAGGCCAGTGTGTCAGCAGGTTGATTCTTTCTGAGCGTTGCTCCAAGTGTGACAAATaGAGCAACATATGCATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKEGKGQCVSRLILSERCSKCDK*SNICMS Trigger: GGACATGCATATGTTGCTCAATTTGTCACACTTGGA...GCAACGCTCAGAAAGAATCAACCTGCTGACACACTGGCCTTTGCCCTCTTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CAA 90 bp | ATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCAGCATCGAAAATTTCCATaGCTCCAGGTGGTAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: IYCLTFLEERGQRPVCQQHRKFP*LQVVGP Trigger: GGGACCTACCACCTGGAGCAATGGAAATTTTCGATG...CTGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CAA 90 bp | TTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCAGGTGATGTGCTTCTGCTTTaGTTTCAGAGACACTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLSHISGGKRAKASVSAGDVLLL*FQRHLP Trigger: TGGCAAGTGTCTCTGAAACAAAAGCAGAAGCACATC...ACCTGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS TCA 90 bp | CCAGGTAATTGTGGTGACAAGACTCTATATCCAAGTGTGACAAATTaGGCAACATATGCATGTCCTCTGGAACCAGGAAGGTCCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: PGNCGDKTLYPSVTN*ATYACPLEPGRSRH Trigger: GTGTCTGGACCTTCCTGGTTCCAGAGGACATGCATATGTTGCTCAATTTGTCACACTTGGATATAGAGTCTTGTCACCACAATTACCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTTGTTTCAGAGACACTaGCCAAGGATAGGAACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRDLLSHISGGKRAKASVLFQRH*PRIGTL Trigger: AAGGGTTCCTATCCTTGGCAAGTGTCTCTGAAACAA...CACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCTCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CAA 90 bp | AGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCCACAAACTGTCCAAATaGGAAGGTTCCAGCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RFIVSHFWRKEGKGQCVSHKLSK*EGSSHL Trigger: AAGATGGCTGGAACCTTCCAATTTGGACAGTTTGTG...GCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CAA 90 bp | GATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCACTTCGTATGGTGGTTTaGTATGTGTGTCTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DLLSHISGGKRAKASVSALRMVV*YVCLSL Trigger: CAGAGAGAGACACACATACAAAACCACCATACGAAG...TGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CCA 90 bp | TGCAGTTGTACAAATAAATCCAGCATTAAAGTGTTCTCCTGGCTCTaGAAGACACACAGGCCTCACAAACTGTCCAAATTGGAAGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSCTNKSSIKVFSWL*KTHRPHKLSKLEGS Trigger: GGAACCTTCCAATTTGGACAGTTTGTGAGGCCTGTGTGTCTTCCAGAGCCAGGAGAACACTTTAATGCTGGATTTATTTGTACAACTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CAA 90 bp | GCAGAGATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTAAAGTAATTCTGAGGTaGGGGCTTAACCAAACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AEIYCLTFLEERGQRPVCKVILR*GLNQTL Trigger: CAGAGTTTGGTTAAGCCCCAACCTCAGAATTACTTT...ACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATCTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CAA 90 bp | GATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCATCTTTCTTTCTTGCATaGTTTCTCCAGCTTCGACCA | + |
|
Preference number: 5 (lower is better) Translates to: DLLSHISGGKRAKASVSASFFLA*FLQLRP Trigger: TGGTCGAAGCTGGAGAAACAATGCAAGAAAGAAAGA...TGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS-3UTR CAA 90 bp | GATTTATTGTCTCACATTTCTGGAGGAAAGAGGGCAAAGGCCAGTGTGTCAGCACTTCTAAAGAGTACATaGCCAGGTAATTGTGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: DLLSHISGGKRAKASVSALLKST*PGNCGD Trigger: GTCACCACAATTACCTGGCAATGTACTCTTTAGAAG...TGCTGACACACTGGCCTTTGCCCTCTTTCCTCCAGAAATGTGAGACAATAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS TCA 90 bp | GTACATTGCCAGGTAATTGTGGTGACAAGACTCTATATCCAAGTGTaGCAAATTGAGCAACATATGCATGTCCTCTGGAACCAGGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VHCQVIVVTRLYIQV*QIEQHMHVLWNQEG Trigger: ACCTTCCTGGTTCCAGAGGACATGCATATGTTGCTCAATTTGTCACACTTGGATATAGAGTCTTGTCACCACAATTACCTGGCAATGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS TCA 90 bp | CTCTGCCCACAGTCAGGATTTCTTATGGAGGAAAGGGTTTCAGAATaGCCTTGTTCCAAGCAGACCATTCCTAATATTAAAATCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LCPQSGFLMEERVSE*PCSKQTIPNIKISL Trigger: CAAGCTGATTTTAATATTAGGAATGGTCTGCTTGGAACAAGGTCATTCTGAAACCCTTTCCTCCATAAGAAATCCTGACTGTGGGCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS GCA 72 bp | TTGGCAGGTTTACCTGCTGCAAGACTTGTGGGAGCCTaGCACCTTCGGACAAGCGACCCCAGCCTGCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LAGLPAARLVGA*HLRTSDPSLQL Trigger: CAACTGCAGGCTGGGGTCGCTTGTCCGAAGGTGGCAGGCTCCCACAAGTCTTGCAGCAGGTAAACCTGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CCA 72 bp | AGTCAAAATTGGCAGGTTTACCTGCTGCAAGACTTGTaGGAGCCTGCCACCTTCGGACAAGCGACCCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SQNWQVYLLQDL*EPATFGQATPA Trigger: GGCTGGGGTCGCTTGTCCGAAGGTGGCAGGCTCCCACAAGTCTTGCAGCAGGTAAACCTGCCAATTTTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CCA 72 bp | CAGTTGCTTGCTCTCATAGTACAGGTGGAGGCTTTCTaGGAAGTGCAGCTCTCCCTCAGACCCACTGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: QLLALIVQVEAF*EVQLSLRPTDE Trigger: CTCATCAGTGGGTCTGAGGGAGAGCTGCACTTCCCAGAAAGCCTCCACCTGTACTATGAGAGCAAGCAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 90 bp | GGTGGAGAACTGCGGGTGTATGATGATGGTTTCAATGGCAAGTGTTaGCTCTCCTGGCTCGGCTTGGCTCAAGTCATGTTCTCCAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GGELRVYDDGFNGKC*LSWLGLAQVMFSSS Trigger: ACTGCTGGAGAACATGACTTGAGCCAAGCCGAGCCAGGAGAGCAAACACTTGCCATTGAAACCATCATCATACACCCGCAGTTCTCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 90 bp | CCCTCAGACCCACTGATGAGACCATCAGGCTCACTGCATAAAGCTTaGGTGCTCTTCCTTCGATGGCCAGTCTGGATATGTTTGAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: PSDPLMRPSGSLHKA*VLFLRWPVWICLRI Trigger: GATCCTCAAACATATCCAGACTGGCCATCGAAGGAAGAGCACCAAAGCTTTATGCAGTGAGCCTGATGGTCTCATCAGTGGGTCTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS GCA 72 bp | TGGGAGCCTGCCACCTTCGGACAAGCGACCCCAGCCTaGAGTTGTACAAATAAATCCAGCATTAAAGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: WEPATFGQATPA*SCTNKSSIKVF Trigger: GAACACTTTAATGCTGGATTTATTTGTACAACTGCAGGCTGGGGTCGCTTGTCCGAAGGTGGCAGGCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CCA 72 bp | CAACAGAACGGCCTCACATTCCTCCTGAGTCAAAATTaGCAGGTTTACCTGCTGCAAGACTTGTGGGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QQNGLTFLLSQN*QVYLLQDLWEP Trigger: AGGCTCCCACAAGTCTTGCAGCAGGTAAACCTGCCAATTTTGACTCAGGAGGAATGTGAGGCCGTTCTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CCA 72 bp | CCTCTCCCCTTGCTTCAGAAGACCACTGTCAATAGCTaGCATCTCCCCGATGTCTTCTTCGTATGGTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PLPLLQKTTVNS*HLPDVFFVWWF Trigger: AAACCACCATACGAAGAAGACATCGGGGAGATGCCAGCTATTGACAGTGGTCTTCTGAAGCAAGGGGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 72 bp | TCAACAGAACGGCCTCACATTCCTCCTGAGTCAAAATaGGCAGGTTTACCTGCTGCAAGACTTGTGGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: STERPHIPPESK*AGLPAARLVGA Trigger: GGCTCCCACAAGTCTTGCAGCAGGTAAACCTGCCAATTTTGACTCAGGAGGAATGTGAGGCCGTTCTGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 90 bp | TCTTTAAGGTCAACAGAACGGCCTCACATTCCTCCTGAGTCAAAATaGGCAGGTTTACCTGCTGCAAGACTTGTGGGAGCCTGCCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLRSTERPHIPPESK*AGLPAARLVGACHL Trigger: AAGGTGGCAGGCTCCCACAAGTCTTGCAGCAGGTAAACCTGCCAATTTTGACTCAGGAGGAATGTGAGGCCGTTCTGTTGACCTTAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 72 bp | TTGGTGCTCTTCCTTCGATGGCCAGTCTGGATATGTTaGAGGATCCAGGGAAGCACTCTCCTAAGATCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVLFLRWPVWIC*RIQGSTLLRSV Trigger: CACAGATCTTAGGAGAGTGCTTCCCTGGATCCTCAAACATATCCAGACTGGCCATCGAAGGAAGAGCACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 72 bp | CCACTGATGAGACCATCAGGCTCACTGCATAAAGCTTaGGTGCTCTTCCTTCGATGGCCAGTCTGGATATGT | + |
|
Preference number: 6 (lower is better) Translates to: PLMRPSGSLHKA*VLFLRWPVWIC Trigger: ACATATCCAGACTGGCCATCGAAGGAAGAGCACCAAAGCTTTATGCAGTGAGCCTGATGGTCTCATCAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS GCA 72 bp | ACCCACTGTGAAGAGATGATGGTCCCTCCACAGATGTaGTTCTGCTTTTGTTTCAGAGACACTTGCCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: THCEEMMVPPQM*FCFCFRDTCQG Trigger: TCCTTGGCAAGTGTCTCTGAAACAAAAGCAGAAGCACATCTGTGGAGGGACCATCATCTCTTCACAGTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CCA 72 bp | CATAAAGCTTTGGTGCTCTTCCTTCGATGGCCAGTCTaGATATGTTTGAGGATCCAGGGAAGCACTCTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: HKALVLFLRWPV*ICLRIQGSTLL Trigger: TAGGAGAGTGCTTCCCTGGATCCTCAAACATATCCAGACTGGCCATCGAAGGAAGAGCACCAAAGCTTTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 72 bp | GGTTTCAATGGCAAGTGTTTGCTCTCCTGGCTCGGCTaGGCTCAAGTCATGTTCTCCAGCAGTTACATTCAA | + |
|
Preference number: 6 (lower is better) Translates to: GFNGKCLLSWLG*AQVMFSSSYIQ Trigger: TTGAATGTAACTGCTGGAGAACATGACTTGAGCCAAGCCGAGCCAGGAGAGCAAACACTTGCCATTGAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 72 bp | CTCTGGAAGACACACAGGCCTCACAAACTGTCCAAATaGGAAGGTTCCAGCCATCTTCAGAAGGGCTATATC | + |
|
Preference number: 6 (lower is better) Translates to: LWKTHRPHKLSK*EGSSHLQKGYI Trigger: GATATAGCCCTTCTGAAGATGGCTGGAACCTTCCAATTTGGACAGTTTGTGAGGCCTGTGTGTCTTCCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 72 bp | TTGTATGTGTGTCTCTCTCTGCATCGAAAATTTCCATaGCTCCAGGTGGTAGGTCCCATGTCTCCAGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LYVCLSLHRKFP*LQVVGPMSPEA Trigger: TGCCTCTGGAGACATGGGACCTACCACCTGGAGCAATGGAAATTTTCGATGCAGAGAGAGACACACATACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 90 bp | AGATCTGTGAAGATTCCAGGAGATCCTTGCTCTTTCTTTCTTGCATaGTTTCTCCAGCTTCGACCACAGCCCAAACCCCAAGAAGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: RSVKIPGDPCSFFLA*FLQLRPQPKPQEVT Trigger: AGTGACTTCTTGGGGTTTGGGCTGTGGTCGAAGCTGGAGAAACAATGCAAGAAAGAAAGAGCAAGGATCTCCTGGAATCTTCACAGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 90 bp | CATAAAGCTTTGGTGCTCTTCCTTCGATGGCCAGTCTGGATATGTTaGAGGATCCAGGGAAGCACTCTCCTAAGATCTGTGAAGATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HKALVLFLRWPVWIC*RIQGSTLLRSVKIP Trigger: TGGAATCTTCACAGATCTTAGGAGAGTGCTTCCCTGGATCCTCAAACATATCCAGACTGGCCATCGAAGGAAGAGCACCAAAGCTTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 90 bp | ATGGTGGTTTTGTATGTGTGTCTCTCTCTGCATCGAAAATTTCCATaGCTCCAGGTGGTAGGTCCCATGTCTCCAGAGGCACTGATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: MVVLYVCLSLHRKFP*LQVVGPMSPEALIH Trigger: ATGAATCAGTGCCTCTGGAGACATGGGACCTACCACCTGGAGCAATGGAAATTTTCGATGCAGAGAGAGACACACATACAAAACCACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS GCA 72 bp | CCTGCAGCCGGAATCAGGATGGTATCTCGGCTTAAGTaGTTTATAGGTGAGATTAAACCCAGTGGCATAATC | + |
|
Preference number: 6 (lower is better) Translates to: PAAGIRMVSRLK*FIGEIKPSGII Trigger: GATTATGCCACTGGGTTTAATCTCACCTATAAAGCACTTAAGCCGAGATACCATCCTGATTCCGGCTGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CCA 72 bp | TCTGGAAGACACACAGGCCTCACAAACTGTCCAAATTaGAAGGTTCCAGCCATCTTCAGAAGGGCTATATCA | + |
|
Preference number: 6 (lower is better) Translates to: SGRHTGLTNCPN*KVPAIFRRAIS Trigger: TGATATAGCCCTTCTGAAGATGGCTGGAACCTTCCAATTTGGACAGTTTGTGAGGCCTGTGTGTCTTCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 72 bp | AGAGATGATGGTCCCTCCACAGATGTGCTTCTGCTTTaGTTTCAGAGACACTTGCCAAGGATAGGAACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RDDGPSTDVLLL*FQRHLPRIGTL Trigger: AAGGGTTCCTATCCTTGGCAAGTGTCTCTGAAACAAAAGCAGAAGCACATCTGTGGAGGGACCATCATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 90 bp | GCTTCCTCCAACAATGCGACTGAAAAGGCTAAAGTAATTCTGAGGTaGGGGCTTAACCAAACTCTGCCCACAGTCAGGATTTCTTATGGA | + |
|
Preference number: 6 (lower is better) Translates to: ASSNNATEKAKVILR*GLNQTLPTVRISYG Trigger: TCCATAAGAAATCCTGACTGTGGGCAGAGTTTGGTTAAGCCCCAACCTCAGAATTACTTTAGCCTTTTCAGTCGCATTGTTGGAGGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS GCA 72 bp | GACTCTATATCCAAGTGTGACAAATTGAGCAACATATaGATGTCCTCTGGAACCAGGAAGGTCCAGACACAC | + |
|
Preference number: 6 (lower is better) Translates to: DSISKCDKLSNI*MSSGTRKVQTH Trigger: GTGTGTCTGGACCTTCCTGGTTCCAGAGGACATGCATATGTTGCTCAATTTGTCACACTTGGATATAGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS TCA 72 bp | TGTGGTGACAAGACTCTATATCCAAGTGTGACAAATTaGGCAACATATGCATGTCCTCTGGAACCAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: CGDKTLYPSVTN*ATYACPLEPGR Trigger: CCTTCCTGGTTCCAGAGGACATGCATATGTTGCTCAATTTGTCACACTTGGATATAGAGTCTTGTCACCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 72 bp | AACAATGCGACTGAAAAGGCTAAAGTAATTCTGAGGTaGGGGCTTAACCAAACTCTGCCCACAGTCAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: NNATEKAKVILR*GLNQTLPTVRI Trigger: AATCCTGACTGTGGGCAGAGTTTGGTTAAGCCCCAACCTCAGAATTACTTTAGCCTTTTCAGTCGCATTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS TCA 72 bp | CAGGTAATTGTGGTGACAAGACTCTATATCCAAGTGTaGCAAATTGAGCAACATATGCATGTCCTCTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QVIVVTRLYIQV*QIEQHMHVLWN Trigger: GTTCCAGAGGACATGCATATGTTGCTCAATTTGTCACACTTGGATATAGAGTCTTGTCACCACAATTACCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 90 bp | TTTCTCCACAGAATTTCCCAACGAGTCTGTCTTCTAAAGAGTACATaGCCAGGTAATTGTGGTGACAAGACTCTATATCCAAGTGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: FLHRISQRVCLLKST*PGNCGDKTLYPSVT Trigger: TGTCACACTTGGATATAGAGTCTTGTCACCACAATTACCTGGCAATGTACTCTTTAGAAGACAGACTCGTTGGGAAATTCTGTGGAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS CAA 72 bp | AGAATTTCCCAACGAGTCTGTCTTCTAAAGAGTACATaGCCAGGTAATTGTGGTGACAAGACTCTATATCCA | + |
|
Preference number: 6 (lower is better) Translates to: RISQRVCLLKST*PGNCGDKTLYP Trigger: TGGATATAGAGTCTTGTCACCACAATTACCTGGCAATGTACTCTTTAGAAGACAGACTCGTTGGGAAATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||
| CDS TCA 72 bp | CAGTCAGGATTTCTTATGGAGGAAAGGGTTTCAGAATaGCCTTGTTCCAAGCAGACCATTCCTAATATTAAA | + |
|
Preference number: 6 (lower is better) Translates to: QSGFLMEERVSE*PCSKQTIPNIK Trigger: TTTAATATTAGGAATGGTCTGCTTGGAACAAGGTCATTCTGAAACCCTTTCCTCCATAAGAAATCCTGACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106755.3 |
||