Pregenerated sensors for OTULINL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056069Ensembl transcript IDs: ENSMUST00000100739.5, ENSMUST00000226145.2, ENSMUST00000226170.2, ENSMUST00000226581.2, ENSMUST00000231473.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCGAACCACCCGTCTCTCTCCACCCATCTCGATGCCCTCCTTGGCTaGAGCACCACTGTGGGTCTTTTAGAAGTGCTTTTCTGCACGTGT | + |
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Preference number: 1 (lower is better) Translates to: ANHPSLSTHLDALLG*STTVGLLEVLFCTC Trigger: ACACGTGCAGAAAAGCACTTCTAAAAGACCCACAGTGGTGCTTCAGCCAAGGAGGGCATCGAGATGGGTGGAGAGAGACGGGTGGTTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR GCA 90 bp | CCAACCCAGAGGATCCCTCAATGGCAAAGTCAGTGCACAGATGTGTaGTGCATTGGAGAACCTCACTCAAACAGAAGGCGAACCACCCGT | + |
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Preference number: 1 (lower is better) Translates to: PTQRIPQWQSQCTDV*CIGEPHSNRRRTTR Trigger: ACGGGTGGTTCGCCTTCTGTTTGAGTGAGGTTCTCCAATGCAGCACACATCTGTGCACTGACTTTGCCATTGAGGGATCCTCTGGGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR TCA 90 bp | ACAGAAACCTGGAAGAAAACCTGGTTCACAGTTTCAGGGCATCCTTaGACATCTGTGGCATCGCCTTTTCAGCACCACGGACAGGTCCCG | + |
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Preference number: 1 (lower is better) Translates to: TETWKKTWFTVSGHP*TSVASPFQHHGQVP Trigger: CGGGACCTGTCCGTGGTGCTGAAAAGGCGATGCCACAGATGTTCAAGGATGCCCTGAAACTGTGAACCAGGTTTTCTTCCAGGTTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR TCA 90 bp | GATCCAAACCACAAGTGTCGCCTATGGAATTCAGGTGATTCATCATaGAGCTCAAAGGATCCGGCGATGACTCCCGGGAAAACAGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: DPNHKCRLWNSGDSS*SSKDPAMTPGKTGV Trigger: GACTCCTGTTTTCCCGGGAGTCATCGCCGGATCCTTTGAGCTTCATGATGAATCACCTGAATTCCATAGGCGACACTTGTGGTTTGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231473.2 |
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| 3UTR GCA 90 bp | CGTCTTAAAGACCCAACCCAGAGGATCCCTCAATGGCAAAGTCAGTaGACAGATGTGTGCTGCATTGGAGAACCTCACTCAAACAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: RLKDPTQRIPQWQSQ*TDVCCIGEPHSNRR Trigger: CCTTCTGTTTGAGTGAGGTTCTCCAATGCAGCACACATCTGTGCACTGACTTTGCCATTGAGGGATCCTCTGGGTTGGGTCTTTAAGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR GCA 90 bp | GGAGATCTCTGGCCACTCCCTGAGAGGCTCCTCGGGGTAGCAGACTaGAAAGTCTCTGGAGTTAAACTTGAACAGTCGAAACACTTTTAT | + |
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Preference number: 1 (lower is better) Translates to: GDLWPLPERLLGVAD*KVSGVKLEQSKHFY Trigger: ATAAAAGTGTTTCGACTGTTCAAGTTTAACTCCAGAGACTTTGCAGTCTGCTACCCCGAGGAGCCTCTCAGGGAGTGGCCAGAGATCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226170.2 |
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| 3UTR CCA 90 bp | ATCACACCAGGGCCACCTGTAGACCAAGTGCATGGACTCCTGTTGTaGGGACCCCCAACCATAAAGTTATTCCCTTGCTACTTCATAACT | + |
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Preference number: 1 (lower is better) Translates to: ITPGPPVDQVHGLLL*GPPTIKLFPCYFIT Trigger: AGTTATGAAGTAGCAAGGGAATAACTTTATGGTTGGGGGTCCCCACAACAGGAGTCCATGCACTTGGTCTACAGGTGGCCCTGGTGTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR GCA 90 bp | CACAGAATGGACCAGTTTATAAAGGACATGAACAGGATTGCCAGCTaGGCATGCAGTCCTTTATCTTCTGAGGTTTGGTTTCTCTTCCAT | + |
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Preference number: 1 (lower is better) Translates to: HRMDQFIKDMNRIAS*ACSPLSSEVWFLFH Trigger: ATGGAAGAGAAACCAAACCTCAGAAGATAAAGGACTGCATGCGCAGCTGGCAATCCTGTTCATGTCCTTTATAAACTGGTCCATTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR GCA 90 bp | ATGGACCAGTTTATAAAGGACATGAACAGGATTGCCAGCTGCGCATaGAGTCCTTTATCTTCTGAGGTTTGGTTTCTCTTCCATCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: MDQFIKDMNRIASCA*SPLSSEVWFLFHLY Trigger: GTAAAGATGGAAGAGAAACCAAACCTCAGAAGATAAAGGACTGCATGCGCAGCTGGCAATCCTGTTCATGTCCTTTATAAACTGGTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR CCA 90 bp | GAGGAGGTGACACAAATTCTCTTTAATCAATGTCTTCTGGGATTCTaGGGCAATGACGCAAACACATCTGTATCTGGAATTTTACTAAGC | + |
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Preference number: 1 (lower is better) Translates to: EEVTQILFNQCLLGF*GNDANTSVSGILLS Trigger: GCTTAGTAAAATTCCAGATACAGATGTGTTTGCGTCATTGCCCCAGAATCCCAGAAGACATTGATTAAAGAGAATTTGTGTCACCTCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR TCA 90 bp | TTCATAACTCTAATATCGCTAATCTTAGGAATTGTAATAAACATCTaGTATGTAGGATATCTGATAAGGGAACCCCTAAGGGGGTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: FITLISLILGIVINI*YVGYLIREPLRGSR Trigger: TCTGGACCCCCTTAGGGGTTCCCTTATCAGATATCCTACATATCAGATGTTTATTACAATTCCTAAGATTAGCGATATTAGAGTTATGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR TCA 90 bp | TCTCTGGAGTTAAACTTGAACAGTCGAAACACTTTTATCTTTACTTaGAGAGAATACCCGAGTATAAACATGTCAATCTGGACAGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: SLELNLNSRNTFIFT*REYPSINMSIWTAS Trigger: ACTTGCTGTCCAGATTGACATGTTTATACTCGGGTATTCTCTTCAAGTAAAGATAAAAGTGTTTCGACTGTTCAAGTTTAACTCCAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226170.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCGGGCCACAGCCATCCTCTCGGAACAGGCATGTGACTGGCTAACTGAAACCGCTTTTCTGCACGTGTaGCCACTGTCTCTGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: SRATAILSEQACDWLTETAFLHV*PLSLRR Trigger: TCTTCTCAGAGACAGTGGGCACACGTGCAGAAAAGC...GGTTTCAGTTAGCCAGTCACATGCCTGTTCCGAGAGGATGGCTGTGGCCCGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTTGGCTGAAGCACCACTGTGGGTCTTTTAGAAGTGCTTTTCTGCACGTGGATGCCCTCCTTGGCTaGAGCACCACTGTGGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: PPWLKHHCGSFRSAFLHVDALLG*STTVGL Trigger: AAGACCCACAGTGGTGCTTCAGCCAAGGAGGGCATC...CACGTGCAGAAAAGCACTTCTAAAAGACCCACAGTGGTGCTTCAGCCAAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR CCA 90 bp | CATCACACCAGGGCCACCTGTAGACCAAGTGCATGGACTCCTGTTGTGGGGACCTGTCTTCTGGGATTCTaGGGCAATGACGCAAACACA | + |
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Preference number: 2 (lower is better) Translates to: HHTRATCRPSAWTPVVGTCLLGF*GNDANT Trigger: TGTGTTTGCGTCATTGCCCCAGAATCCCAGAAGACA...GGTCCCCACAACAGGAGTCCATGCACTTGGTCTACAGGTGGCCCTGGTGTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGCATCCTTGAACATCTGTGGCATCGCCTTTTCAGCACCACGGACAGGTCCCCAATGGCAAAGTCAGTaGACAGATGTGTGCTGCATT | + |
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Preference number: 2 (lower is better) Translates to: RASLNICGIAFSAPRTGPQWQSQ*TDVCCI Trigger: AATGCAGCACACATCTGTGCACTGACTTTGCCATTG...GGGACCTGTCCGTGGTGCTGAAAAGGCGATGCCACAGATGTTCAAGGATGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR CAA 90 bp | AACAGAAACCTGGAAGAAAACCTGGTTCACAGTTTCAGGGCATCCTaGAACATCTGTGGCATCGCCTTTTCAGCACCACGGACAGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: NRNLEENLVHSFRAS*NICGIAFSAPRTGP Trigger: GGGACCTGTCCGTGGTGCTGAAAAGGCGATGCCACAGATGTTCAAGGATGCCCTGAAACTGTGAACCAGGTTTTCTTCCAGGTTTCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCATCCTTGAACATCTGTGGCATCGCCTTTTCAGCACCACGGACAGGTCCCTTAATCAATGTCTTCTaGGATTCTGGGGCAATGACG | + |
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Preference number: 2 (lower is better) Translates to: RASLNICGIAFSAPRTGPLINVF*DSGAMT Trigger: CGTCATTGCCCCAGAATCCCAGAAGACATTGATTAA...GGGACCTGTCCGTGGTGCTGAAAAGGCGATGCCACAGATGTTCAAGGATGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCGGGCCACAGCCATCCTCTCGGAACAGGCATGTGACTGGCTAACTGAAACCAGGAAACACAATATCTaGTATACTAGCTCATTCATG | + |
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Preference number: 2 (lower is better) Translates to: SRATAILSEQACDWLTETRKHNI*YTSSFM Trigger: CATGAATGAGCTAGTATAGCAGATATTGTGTTTCCT...GGTTTCAGTTAGCCAGTCACATGCCTGTTCCGAGAGGATGGCTGTGGCCCGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR GCA 90 bp | CCACAGGTTGAGAACCACAGCTCTAGGAATACGGGTTTGAATTTAAGCCTGTACGCTTTTCTGCACGTGTaGCCACTGTCTCTGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: PQVENHSSRNTGLNLSLYAFLHV*PLSLRR Trigger: TCTTCTCAGAGACAGTGGGCACACGTGCAGAAAAGC...GTACAGGCTTAAATTCAAACCCGTATTCCTAGAGCTGTGGTTCTCAACCTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGCATCCTTGAACATCTGTGGCATCGCCTTTTCAGCACCACGGACAGGTCCCAGGAAACACAATATCTaGTATACTAGCTCATTCATG | + |
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Preference number: 2 (lower is better) Translates to: RASLNICGIAFSAPRTGPRKHNI*YTSSFM Trigger: CATGAATGAGCTAGTATAGCAGATATTGTGTTTCCT...GGGACCTGTCCGTGGTGCTGAAAAGGCGATGCCACAGATGTTCAAGGATGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGGGCATCCTTGAACATCTGTGGCATCGCCTTTTCAGCACCACGGACAGGTTGGAAACAGAAACCTaGAAGAAAACCTGGTTCACA | + |
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Preference number: 2 (lower is better) Translates to: FQGILEHLWHRLFSTTDRLETET*KKTWFT Trigger: TGTGAACCAGGTTTTCTTCCAGGTTTCTGTTTCCAA...CCTGTCCGTGGTGCTGAAAAGGCGATGCCACAGATGTTCAAGGATGCCCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR CAA 90 bp | AAACAGGAGTCTGAAAAGGCTGGGGATAACCTTGTTGGTCTTCATTaGCTCATACGCTTCCGTGACCTGGTAGAGCATGAGGAACTTCAA | + |
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Preference number: 2 (lower is better) Translates to: KQESEKAGDNLVGLH*LIRFRDLVEHEELQ Trigger: TTGAAGTTCCTCATGCTCTACCAGGTCACGGAAGCGTATGAGCAAATGAAGACCAACAAGGTTATCCCCAGCCTTTTCAGACTCCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231473.2 |
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| 3UTR-3UTR TCA 90 bp | CAATGGAAAACTTATTTCCTTCTGGAAATGTTCTGTGAGAGTAGAAATCCAGGCGATGCCCTCCTTGGCTaGAGCACCACTGTGGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: QWKTYFLLEMFCESRNPGDALLG*STTVGL Trigger: AAGACCCACAGTGGTGCTTCAGCCAAGGAGGGCATC...GCCTGGATTTCTACTCTCACAGAACATTTCCAGAAGGAAATAAGTTTTCCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGAGATTCTTACTGAAGAACATGAAGATCCGAGATAAAACAATCCCCACTGATGCCCTCCTTGGCTaGAGCACCACTGTGGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: TERFLLKNMKIRDKTIPTDALLG*STTVGL Trigger: AAGACCCACAGTGGTGCTTCAGCCAAGGAGGGCATC...AGTGGGGATTGTTTTATCTCGGATCTTCATGTTCTTCAGTAAGAATCTCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGGACCCCCAACCATAAAGTTATTCCCTTGCTACTTCATAACTCTAATATCGGCTTTTCTGCACGTGTaGCCACTGTCTCTGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: WGPPTIKLFPCYFITLISAFLHV*PLSLRR Trigger: TCTTCTCAGAGACAGTGGGCACACGTGCAGAAAAGC...CGATATTAGAGTTATGAAGTAGCAAGGGAATAACTTTATGGTTGGGGGTCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATTACTAGCGCTGCCATTGGAAACAGAAACCTGGAAGAAAACCTGGTTCACCAGAGGATCCCTCAATaGCAAAGTCAGTGCACAGAT | + |
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Preference number: 2 (lower is better) Translates to: FITSAAIGNRNLEENLVHQRIPQ*QSQCTD Trigger: ATCTGTGCACTGACTTTGCCATTGAGGGATCCTCTG...GTGAACCAGGTTTTCTTCCAGGTTTCTGTTTCCAATGGCAGCGCTAGTAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR CCA 90 bp | CAAATTCTCTTTAATCAATGTCTTCTGGGATTCTGGGGCAATGACGCAAACACACAGAGGATCCCTCAATaGCAAAGTCAGTGCACAGAT | + |
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Preference number: 2 (lower is better) Translates to: QILFNQCLLGFWGNDANTQRIPQ*QSQCTD Trigger: ATCTGTGCACTGACTTTGCCATTGAGGGATCCTCTG...TGTGTTTGCGTCATTGCCCCAGAATCCCAGAAGACATTGATTAAAGAGAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGGACCCCCAACCATAAAGTTATTCCCTTGCTACTTCATAACTCTAATATCGTTAATCAATGTCTTCTaGGATTCTGGGGCAATGACG | + |
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Preference number: 2 (lower is better) Translates to: WGPPTIKLFPCYFITLISLINVF*DSGAMT Trigger: CGTCATTGCCCCAGAATCCCAGAAGACATTGATTAA...CGATATTAGAGTTATGAAGTAGCAAGGGAATAACTTTATGGTTGGGGGTCCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR CAA 90 bp | TTCCACATGACATGGAAGCCCTGGCTGACTTACTATGTACATTTTTaGAGCACCTTCCTAGGAAACACAATATCTGCTATACTAGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: FHMTWKPWLTYYVHF*STFLGNTISAILAH Trigger: ATGAGCTAGTATAGCAGATATTGTGTTTCCTAGGAAGGTGCTCAAAAAATGTACATAGTAAGTCAGCCAGGGCTTCCATGTCATGTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR GCA 90 bp | ATCACTTATCATCGGCGAAGTGTTTTCATTGCTGAATTCTTGAACAAGTCAATGCTCGGGGTAGCAGACTaGAAAGTCTCTGGAGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: ITYHRRSVFIAEFLNKSMLGVAD*KVSGVK Trigger: TTTAACTCCAGAGACTTTGCAGTCTGCTACCCCGAG...CATTGACTTGTTCAAGAATTCAGCAATGAAAACACTTCGCCGATGATAAGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226170.2 |
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| 3UTR-3UTR CCA 90 bp | CAAATTCTCTTTAATCAATGTCTTCTGGGATTCTGGGGCAATGACGCAAACACATTAATCAATGTCTTCTaGGATTCTGGGGCAATGACG | + |
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Preference number: 2 (lower is better) Translates to: QILFNQCLLGFWGNDANTLINVF*DSGAMT Trigger: CGTCATTGCCCCAGAATCCCAGAAGACATTGATTAA...TGTGTTTGCGTCATTGCCCCAGAATCCCAGAAGACATTGATTAAAGAGAATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR CAA 90 bp | CCCAGGAGGGTAATGCTTGTAAAACTTGGCCCTGTTTATTTACGATaGTTCCAAATCCACAGAGAGATTCTTACTGAAGAACATGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: PRRVMLVKLGPVYLR*FQIHREILTEEHED Trigger: ATCTTCATGTTCTTCAGTAAGAATCTCTCTGTGGATTTGGAACAATCGTAAATAAACAGGGCCAAGTTTTACAAGCATTACCCTCCTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR GCA 90 bp | CACCTTCCTAGGAAACACAATATCTGCTATACTAGCTCATTCATGGATTTAACACAATGGCAAAGTCAGTaGACAGATGTGTGCTGCATT | + |
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Preference number: 2 (lower is better) Translates to: HLPRKHNICYTSSFMDLTQWQSQ*TDVCCI Trigger: AATGCAGCACACATCTGTGCACTGACTTTGCCATTG...TGTTAAATCCATGAATGAGCTAGTATAGCAGATATTGTGTTTCCTAGGAAGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTACAATATTACAAACCAGAGGTTGTTTGCGGTGTATGCGCATATACAAATAAGATGTGTGCTGCATTaGAGAACCTCACTCAAACAG | + |
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Preference number: 2 (lower is better) Translates to: LYNITNQRLFAVYAHIQIRCVLH*RTSLKQ Trigger: CTGTTTGAGTGAGGTTCTCCAATGCAGCACACATCT...TATTTGTATATGCGCATACACCGCAAACAACCTCTGGTTTGTAATATTGTACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGACATATAAAGAAACTGTACAATATTACAAACCAGAGGTTGTTTGCGGTGAGATGTGTGCTGCATTaGAGAACCTCACTCAAACAG | + |
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Preference number: 2 (lower is better) Translates to: CRHIKKLYNITNQRLFAVRCVLH*RTSLKQ Trigger: CTGTTTGAGTGAGGTTCTCCAATGCAGCACACATCT...CACCGCAAACAACCTCTGGTTTGTAATATTGTACAGTTTCTTTATATGTCTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR CAA 90 bp | GTCTCTGGAGTTAAACTTGAACAGTCGAAACACTTTTATCTTTACTaGAAGAGAATACCCGAGTATAAACATGTCAATCTGGACAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: VSGVKLEQSKHFYLY*KRIPEYKHVNLDSK Trigger: CTTGCTGTCCAGATTGACATGTTTATACTCGGGTATTCTCTTCAAGTAAAGATAAAAGTGTTTCGACTGTTCAAGTTTAACTCCAGAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226170.2 |
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| 3UTR-3UTR GCA 90 bp | CAATGGAAAACTTATTTCCTTCTGGAAATGTTCTGTGAGAGTAGAAATCCAGGCGTTGTTTGCGGTGTATaGGCATATACAAATACATAC | + |
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Preference number: 2 (lower is better) Translates to: QWKTYFLLEMFCESRNPGVVCGV*AYTNTY Trigger: GTATGTATTTGTATATGCGCATACACCGCAAACAAC...GCCTGGATTTCTACTCTCACAGAACATTTCCAGAAGGAAATAAGTTTTCCATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTTGAGCACCTTCCTAGGAAACACAATATCTGCTATACTAGCTCATTCATGGGTTGTTTGCGGTGTATaGGCATATACAAATACATAC | + |
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Preference number: 2 (lower is better) Translates to: FLSTFLGNTISAILAHSWVVCGV*AYTNTY Trigger: GTATGTATTTGTATATGCGCATACACCGCAAACAAC...CCATGAATGAGCTAGTATAGCAGATATTGTGTTTCCTAGGAAGGTGCTCAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR GCA 72 bp | GAAGGCGAACCACCCGTCTCTCTCCACCCATCTCGATaGCCTCCTTGGCTGAAGCACCACTGTGGGTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: EGEPPVSLHPSR*PPWLKHHCGSF Trigger: AAAAGACCCACAGTGGTGCTTCAGCCAAGGAGGGCATCGAGATGGGTGGAGAGAGACGGGTGGTTCGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR TCA 72 bp | CATTCTCAGTCAGTAGGGAGATCTCTGGCCACTCCCTaGGAGGCTCCTCGGGGTAGCAGACTGCAAAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: HSQSVGRSLATP*EAPRGSRLQSL Trigger: GAGACTTTGCAGTCTGCTACCCCGAGGAGCCTCTCAGGGAGTGGCCAGAGATCTCCCTACTGACTGAGAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226170.2 |
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| 3UTR CCA 72 bp | CCACCCGTCTCTCTCCACCCATCTCGATGCCCTCCTTaGCTGAAGCACCACTGTGGGTCTTTTAGAAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: PPVSLHPSRCPP*LKHHCGSFRSA Trigger: AGCACTTCTAAAAGACCCACAGTGGTGCTTCAGCCAAGGAGGGCATCGAGATGGGTGGAGAGAGACGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| 3UTR CCA 72 bp | CCTGGTTCACAGTTTCAGGGCATCCTTGAACATCTGTaGCATCGCCTTTTCAGCACCACGGACAGGTCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: PGSQFQGILEHL*HRLFSTTDRSR Trigger: CCGGGACCTGTCCGTGGTGCTGAAAAGGCGATGCCACAGATGTTCAAGGATGCCCTGAAACTGTGAACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAGGGCATCCTTGAACATCTGTGGCATCGCCTTTTCAGCACCACGGACAGGGTCCAGACCCACAGGTaGAGAACCACAGCTCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FQGILEHLWHRLFSTTDRVQTHR*RTTALG Trigger: TCCTAGAGCTGTGGTTCTCAACCTGTGGGTCTGGAC...CCTGTCCGTGGTGCTGAAAAGGCGATGCCACAGATGTTCAAGGATGCCCTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR GCA 72 bp | GACCCAACCCAGAGGATCCCTCAATGGCAAAGTCAGTaGACAGATGTGTGCTGCATTGGAGAACCTCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: DPTQRIPQWQSQ*TDVCCIGEPHS Trigger: TGAGTGAGGTTCTCCAATGCAGCACACATCTGTGCACTGACTTTGCCATTGAGGGATCCTCTGGGTTGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR GCA 72 bp | TGGCCACTCCCTGAGAGGCTCCTCGGGGTAGCAGACTaGAAAGTCTCTGGAGTTAAACTTGAACAGTCGAAA | + |
|
Preference number: 3 (lower is better) Translates to: WPLPERLLGVAD*KVSGVKLEQSK Trigger: TTTCGACTGTTCAAGTTTAACTCCAGAGACTTTGCAGTCTGCTACCCCGAGGAGCCTCTCAGGGAGTGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226170.2 |
||
| 3UTR CCA 72 bp | TCAATGGCAAAGTCAGTGCACAGATGTGTGCTGCATTaGAGAACCTCACTCAAACAGAAGGCGAACCACCCG | + |
|
Preference number: 3 (lower is better) Translates to: SMAKSVHRCVLH*RTSLKQKANHP Trigger: CGGGTGGTTCGCCTTCTGTTTGAGTGAGGTTCTCCAATGCAGCACACATCTGTGCACTGACTTTGCCATTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR TCA 72 bp | CACAAGTGTCGCCTATGGAATTCAGGTGATTCATCATaGAGCTCAAAGGATCCGGCGATGACTCCCGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: HKCRLWNSGDSS*SSKDPAMTPGK Trigger: TTTCCCGGGAGTCATCGCCGGATCCTTTGAGCTTCATGATGAATCACCTGAATTCCATAGGCGACACTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231473.2 |
||
| 3UTR TCA 72 bp | TTTTCTGCACGTGTGCCCACTGTCTCTGAGAAGAACTaGTGTCCAGTCCACGGCAGACTTAAAAGACGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FSARVPTVSEKN*CPVHGRLKRRE Trigger: TTCCCGTCTTTTAAGTCTGCCGTGGACTGGACATCAGTTCTTCTCAGAGACAGTGGGCACACGTGCAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226170.2 |
||
| 3UTR GCA 72 bp | AGGATCCCTCAATGGCAAAGTCAGTGCACAGATGTGTaGTGCATTGGAGAACCTCACTCAAACAGAAGGCGA | + |
|
Preference number: 3 (lower is better) Translates to: RIPQWQSQCTDV*CIGEPHSNRRR Trigger: TCGCCTTCTGTTTGAGTGAGGTTCTCCAATGCAGCACACATCTGTGCACTGACTTTGCCATTGAGGGATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTACTAGCGCTGCCATTGGAAACAGAAACCTGGAAGAAAACCTGGTTCACATCTCGATGCCCTCCTaGGCTGAAGCACCACTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FITSAAIGNRNLEENLVHISMPS*AEAPLW Trigger: CCACAGTGGTGCTTCAGCCAAGGAGGGCATCGAGAT...GTGAACCAGGTTTTCTTCCAGGTTTCTGTTTCCAATGGCAGCGCTAGTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAGATCACACACAGAATGGACCAGTTTATAAAGGACATGAACAGGATTGCCATCTCGATGCCCTCCTaGGCTGAAGCACCACTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LQITHRMDQFIKDMNRIAISMPS*AEAPLW Trigger: CCACAGTGGTGCTTCAGCCAAGGAGGGCATCGAGAT...GGCAATCCTGTTCATGTCCTTTATAAACTGGTCCATTCTGTGTGTGATCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGCATCCTTGAACATCTGTGGCATCGCCTTTTCAGCACCACGGACAGGTCCCCTCATCCAAAACTTTTaGAGTGATTGCATACACATG | + |
|
Preference number: 3 (lower is better) Translates to: RASLNICGIAFSAPRTGPLIQNF*SDCIHM Trigger: CATGTGTATGCAATCACTCAAAAAGTTTTGGATGAG...GGGACCTGTCCGTGGTGCTGAAAAGGCGATGCCACAGATGTTCAAGGATGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTACTAGCGCTGCCATTGGAAACAGAAACCTGGAAGAAAACCTGGTTCACAGTTTCAGGGCATCCTaGAACATCTGTGGCATCGCC | + |
|
Preference number: 3 (lower is better) Translates to: FITSAAIGNRNLEENLVHSFRAS*NICGIA Trigger: GGCGATGCCACAGATGTTCAAGGATGCCCTGAAACT...GTGAACCAGGTTTTCTTCCAGGTTTCTGTTTCCAATGGCAGCGCTAGTAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGATTCTTGAGCATGCTTCAGATCACACACAGAATGGACCAGTTTATAAAGGTCCAGACCCACAGGTaGAGAACCACAGCTCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: MRFLSMLQITHRMDQFIKVQTHR*RTTALG Trigger: TCCTAGAGCTGTGGTTCTCAACCTGTGGGTCTGGAC...CTTTATAAACTGGTCCATTCTGTGTGTGATCTGAAGCATGCTCAAGAATCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATATAAAGAAACTGTACAATATTACAAACCAGAGGTTGTTTGCGGTGTATGCATCTCGATGCCCTCCTaGGCTGAAGCACCACTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TYKETVQYYKPEVVCGVCISMPS*AEAPLW Trigger: CCACAGTGGTGCTTCAGCCAAGGAGGGCATCGAGAT...GCATACACCGCAAACAACCTCTGGTTTGTAATATTGTACAGTTTCTTTATATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAGATCACACACAGAATGGACCAGTTTATAAAGGACATGAACAGGATTGCCCAGATGTGTGCTGCATaGGAGAACCTCACTCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LQITHRMDQFIKDMNRIAQMCAA*ENLTQT Trigger: TGTTTGAGTGAGGTTCTCCAATGCAGCACACATCTG...GGCAATCCTGTTCATGTCCTTTATAAACTGGTCCATTCTGTGTGTGATCTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTACTAGCGCTGCCATTGGAAACAGAAACCTGGAAGAAAACCTGGTTCACCAGATGTGTGCTGCATaGGAGAACCTCACTCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: FITSAAIGNRNLEENLVHQMCAA*ENLTQT Trigger: TGTTTGAGTGAGGTTCTCCAATGCAGCACACATCTG...GTGAACCAGGTTTTCTTCCAGGTTTCTGTTTCCAATGGCAGCGCTAGTAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR GCA 72 bp | GACCAGTTTATAAAGGACATGAACAGGATTGCCAGCTaGGCATGCAGTCCTTTATCTTCTGAGGTTTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: DQFIKDMNRIAS*ACSPLSSEVWF Trigger: AAACCAAACCTCAGAAGATAAAGGACTGCATGCGCAGCTGGCAATCCTGTTCATGTCCTTTATAAACTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGACCCCCAACCATAAAGTTATTCCCTTGCTACTTCATAACTCTAATATCGTGTACTTGTCATGTTTaGTTTAGGGGTCGAGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: WGPPTIKLFPCYFITLISCTCHV*FRGRGG Trigger: ACCTCCTCGACCCCTAAACAAAACATGACAAGTACA...CGATATTAGAGTTATGAAGTAGCAAGGGAATAACTTTATGGTTGGGGGTCCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTACTAGCGCTGCCATTGGAAACAGAAACCTGGAAGAAAACCTGGTTCACAGCCAGATGAGATTCTaGAGCATGCTTCAGATCACA | + |
|
Preference number: 3 (lower is better) Translates to: FITSAAIGNRNLEENLVHSQMRF*SMLQIT Trigger: TGTGATCTGAAGCATGCTCAAGAATCTCATCTGGCT...GTGAACCAGGTTTTCTTCCAGGTTTCTGTTTCCAATGGCAGCGCTAGTAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR GCA 72 bp | TTTATAAAGGACATGAACAGGATTGCCAGCTGCGCATaGAGTCCTTTATCTTCTGAGGTTTGGTTTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FIKDMNRIASCA*SPLSSEVWFLF Trigger: GAAGAGAAACCAAACCTCAGAAGATAAAGGACTGCATGCGCAGCTGGCAATCCTGTTCATGTCCTTTATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR CCA 72 bp | TTTTTATTACTAGCGCTGCCATTGGAAACAGAAACCTaGAAGAAAACCTGGTTCACAGTTTCAGGGCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: FLLLALPLETET*KKTWFTVSGHP Trigger: AGGATGCCCTGAAACTGTGAACCAGGTTTTCTTCCAGGTTTCTGTTTCCAATGGCAGCGCTAGTAATAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGATTCTTGAGCATGCTTCAGATCACACACAGAATGGACCAGTTTATAAAGTGTACTTGTCATGTTTaGTTTAGGGGTCGAGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: MRFLSMLQITHRMDQFIKCTCHV*FRGRGG Trigger: ACCTCCTCGACCCCTAAACAAAACATGACAAGTACA...CTTTATAAACTGGTCCATTCTGTGTGTGATCTGAAGCATGCTCAAGAATCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR-3UTR CAA 90 bp | CAATGGAAAACTTATTTCCTTCTGGAAATGTTCTGTGAGAGTAGAAATCCAGGCTGTACTTGTCATGTTTaGTTTAGGGGTCGAGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QWKTYFLLEMFCESRNPGCTCHV*FRGRGG Trigger: ACCTCCTCGACCCCTAAACAAAACATGACAAGTACA...GCCTGGATTTCTACTCTCACAGAACATTTCCAGAAGGAAATAAGTTTTCCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTGAGCACCTTCCTAGGAAACACAATATCTGCTATACTAGCTCATTCATGGAGCCAGATGAGATTCTaGAGCATGCTTCAGATCACA | + |
|
Preference number: 3 (lower is better) Translates to: FLSTFLGNTISAILAHSWSQMRF*SMLQIT Trigger: TGTGATCTGAAGCATGCTCAAGAATCTCATCTGGCT...CCATGAATGAGCTAGTATAGCAGATATTGTGTTTCCTAGGAAGGTGCTCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR TCA 72 bp | CGTCATCACTTATCATCGGCGAAGTGTTTTCATTGCTaGATTCTTGAACAAGTCAATGGAAAACTTATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RHHLSSAKCFHC*ILEQVNGKLIS Trigger: GGAAATAAGTTTTCCATTGACTTGTTCAAGAATTCAGCAATGAAAACACTTCGCCGATGATAAGTGATGACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATATAAAGAAACTGTACAATATTACAAACCAGAGGTTGTTTGCGGTGTATGCTCTCTGGAGTTAAACTaGAACAGTCGAAACACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TYKETVQYYKPEVVCGVCSLELN*NSRNTF Trigger: AAAAGTGTTTCGACTGTTCAAGTTTAACTCCAGAGA...GCATACACCGCAAACAACCTCTGGTTTGTAATATTGTACAGTTTCTTTATATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226170.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCCACTCCCTGAGAGGCTCCTCGGGGTAGCAGACTGCAAAGTCTCTGGACAAGTACCCACGGTGTaGAAGCAGGGCAGGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: LWPLPERLLGVADCKVSGQVPTV*KQGRTM Trigger: CATGGTCCTGCCCTGCTTCCACACCGTGGGTACTTG...TCCAGAGACTTTGCAGTCTGCTACCCCGAGGAGCCTCTCAGGGAGTGGCCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGGCCACTCCCTGAGAGGCTCCTCGGGGTAGCAGACTGCAAAGTCTCTGGATCAGGTGATTCATCATaGAGCTCAAAGGATCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LWPLPERLLGVADCKVSGSGDSS*SSKDPA Trigger: CGCCGGATCCTTTGAGCTTCATGATGAATCACCTGA...TCCAGAGACTTTGCAGTCTGCTACCCCGAGGAGCCTCTCAGGGAGTGGCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226170.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGGCGAACCACCCGTCTCTCTCCACCCATCTCGATGCCCTCCTTGGCTGCTCGGGGTAGCAGACTaGAAAGTCTCTGGAGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEGEPPVSLHPSRCPPWLLGVAD*KVSGVK Trigger: TTTAACTCCAGAGACTTTGCAGTCTGCTACCCCGAG...CAGCCAAGGAGGGCATCGAGATGGGTGGAGAGAGACGGGTGGTTCGCCTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 |
||
| CDS-3UTR GCA 90 bp | CATCACACCAGGGCCACCTGTAGACCAAGTGCATGGACTCCTGTTGTGGGGACCCTCGGGGTAGCAGACTaGAAAGTCTCTGGAGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HHTRATCRPSAWTPVVGTLGVAD*KVSGVK Trigger: TTTAACTCCAGAGACTTTGCAGTCTGCTACCCCGAG...GGTCCCCACAACAGGAGTCCATGCACTTGGTCTACAGGTGGCCCTGGTGTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCTTGGCTGAAGCACCACTGTGGGTCTTTTAGAAGTGCTTTTCTGCACGTGAGCAGGGCAGGACCATaGCTAGCAAGAAGTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPWLKHHCGSFRSAFLHVSRAGP*LARSQE Trigger: CTCCTGACTTCTTGCTAGTCATGGTCCTGCCCTGCT...CACGTGCAGAAAAGCACTTCTAAAAGACCCACAGTGGTGCTTCAGCCAAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCATCCTTGAACATCTGTGGCATCGCCTTTTCAGCACCACGGACAGGTCCCAAGTCAGGAGAAAACTaGTCCAAACCACAAGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RASLNICGIAFSAPRTGPKSGEN*SKPQVS Trigger: CGACACTTGTGGTTTGGATCAGTTTTCTCCTGACTT...GGGACCTGTCCGTGGTGCTGAAAAGGCGATGCCACAGATGTTCAAGGATGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226170.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGGCGAACCACCCGTCTCTCTCCACCCATCTCGATGCCCTCCTTGGCTGACTTTCCAAACACATTaGAACCTGTGTACTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TEGEPPVSLHPSRCPPWLTFQTH*NLCTSQ Trigger: CTGAGAAGTACACAGGTTCCAATGTGTTTGGAAAGT...CAGCCAAGGAGGGCATCGAGATGGGTGGAGAGAGACGGGTGGTTCGCCTTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | CCACAGGTTGAGAACCACAGCTCTAGGAATACGGGTTTGAATTTAAGCCTGTACCAAAGGATCCGGCGATaGCTCCCGGGAAAACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQVENHSSRNTGLNLSLYQRIRR*LPGKQE Trigger: CTCCTGTTTTCCCGGGAGTCATCGCCGGATCCTTTG...GTACAGGCTTAAATTCAAACCCGTATTCCTAGAGCTGTGGTTCTCAACCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCTTGGCTGAAGCACCACTGTGGGTCTTTTAGAAGTGCTTTTCTGCACGTGTCAGGTGATTCATCATaGAGCTCAAAGGATCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PPWLKHHCGSFRSAFLHVSGDSS*SSKDPA Trigger: CGCCGGATCCTTTGAGCTTCATGATGAATCACCTGA...CACGTGCAGAAAAGCACTTCTAAAAGACCCACAGTGGTGCTTCAGCCAAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | CATCACACCAGGGCCACCTGTAGACCAAGTGCATGGACTCCTGTTGTGGGGACCCCTATGGAATTCAGGTaGTTCATCATGAAGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HHTRATCRPSAWTPVVGTPMEFR*FIMKLK Trigger: TTTGAGCTTCATGATGAATCACCTGAATTCCATAGG...GGTCCCCACAACAGGAGTCCATGCACTTGGTCTACAGGTGGCCCTGGTGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR CCA 90 bp | TCCCGGGCCACAGCCATCCTCTCGGAACAGGCATGTGACTGGCTAACTGAAACCCGAACACATTTAATATaGTGCCTCCAGAACAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRATAILSEQACDWLTETRTHLI*CLQNNS Trigger: GGAATTGTTCTGGAGGCACCATATTAAATGTGTTCG...GGTTTCAGTTAGCCAGTCACATGCCTGTTCCGAGAGGATGGCTGTGGCCCGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCATCCTTGAACATCTGTGGCATCGCCTTTTCAGCACCACGGACAGGTCCCATCCACCATTTCAGCTaGTGCCCTAAGTATAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: RASLNICGIAFSAPRTGPIHHFS*CPKYKY Trigger: GTATTTATACTTAGGGCATCAGCTGAAATGGTGGAT...GGGACCTGTCCGTGGTGCTGAAAAGGCGATGCCACAGATGTTCAAGGATGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCTTGGCTGAAGCACCACTGTGGGTCTTTTAGAAGTGCTTTTCTGCACGTGGGAACAACACAGATCTaGGAGCATCGTAGTTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPWLKHHCGSFRSAFLHVGTTQI*EHRSYL Trigger: GAGATAACTACGATGCTCTCAGATCTGTGTTGTTCC...CACGTGCAGAAAAGCACTTCTAAAAGACCCACAGTGGTGCTTCAGCCAAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGATTCTTGAGCATGCTTCAGATCACACACAGAATGGACCAGTTTATAAAGCAAAGGATCCGGCGATaGCTCCCGGGAAAACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MRFLSMLQITHRMDQFIKQRIRR*LPGKQE Trigger: CTCCTGTTTTCCCGGGAGTCATCGCCGGATCCTTTG...CTTTATAAACTGGTCCATTCTGTGTGTGATCTGAAGCATGCTCAAGAATCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCTTGGCTGAAGCACCACTGTGGGTCTTTTAGAAGTGCTTTTCTGCACGTGATCCAGTTACAGCCTTaGGAAAAGAGTAGTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPWLKHHCGSFRSAFLHVIQLQP*EKSSFS Trigger: TGAAAAACTACTCTTTTCTCAAGGCTGTAACTGGAT...CACGTGCAGAAAAGCACTTCTAAAAGACCCACAGTGGTGCTTCAGCCAAGGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGACCCCCAACCATAAAGTTATTCCCTTGCTACTTCATAACTCTAATATCGACTAGTATCCAGGAGTaGACTTGGTCACTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WGPPTIKLFPCYFITLISTSIQE*TWSLPE Trigger: CTCAGGAAGTGACCAAGTTCACTCCTGGATACTAGT...CGATATTAGAGTTATGAAGTAGCAAGGGAATAACTTTATGGTTGGGGGTCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGACATATAAAGAAACTGTACAATATTACAAACCAGAGGTTGTTTGCGGTGCAAAGGATCCGGCGATaGCTCCCGGGAAAACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CRHIKKLYNITNQRLFAVQRIRR*LPGKQE Trigger: CTCCTGTTTTCCCGGGAGTCATCGCCGGATCCTTTG...CACCGCAAACAACCTCTGGTTTGTAATATTGTACAGTTTCTTTATATGTCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGACCCCCAACCATAAAGTTATTCCCTTGCTACTTCATAACTCTAATATCGAGAGGCTGTTACACATaGTCCCTCTCTTGTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WGPPTIKLFPCYFITLISRGCYT*SLSCGD Trigger: ATCACCACAAGAGAGGGAGCATGTGTAACAGCCTCT...CGATATTAGAGTTATGAAGTAGCAAGGGAATAACTTTATGGTTGGGGGTCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR GCA 90 bp | CTTCAGATCACACACAGAATGGACCAGTTTATAAAGGACATGAACAGGATTGCCAGAGGCTGTTACACATaGTCCCTCTCTTGTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQITHRMDQFIKDMNRIARGCYT*SLSCGD Trigger: ATCACCACAAGAGAGGGAGCATGTGTAACAGCCTCT...GGCAATCCTGTTCATGTCCTTTATAAACTGGTCCATTCTGTGTGTGATCTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR CCA 90 bp | AATCAATGTCTTCTGGGATTCTGGGGCAATGACGCAAACACATCTGTATCTGGAGCAGCACTAAGGACTTaGCTTGTAACTAGTATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NQCLLGFWGNDANTSVSGAALRT*LVTSIQ Trigger: CTGGATACTAGTTACAAGCCAAGTCCTTAGTGCTGC...TCCAGATACAGATGTGTTTGCGTCATTGCCCCAGAATCCCAGAAGACATTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGACCCCCAACCATAAAGTTATTCCCTTGCTACTTCATAACTCTAATATCGTTGTTGGTCTTCATTTaGTCATACGCTTCCGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: WGPPTIKLFPCYFITLISLLVFI*SYASVT Trigger: GGTCACGGAAGCGTATGAGCAAATGAAGACCAACAA...CGATATTAGAGTTATGAAGTAGCAAGGGAATAACTTTATGGTTGGGGGTCCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR CCA 90 bp | AATCAATGTCTTCTGGGATTCTGGGGCAATGACGCAAACACATCTGTATCTGGACACAAGTGTCGCCTATaGAATTCAGGTGATTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NQCLLGFWGNDANTSVSGHKCRL*NSGDSS Trigger: TGATGAATCACCTGAATTCCATAGGCGACACTTGTG...TCCAGATACAGATGTGTTTGCGTCATTGCCCCAGAATCCCAGAAGACATTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR CAA 72 bp | AATTCAACGGAAACCCTTTATAGCCAGATGAGATTCTaGAGCATGCTTCAGATCACACACAGAATGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSTETLYSQMRF*SMLQITHRMDQ Trigger: CTGGTCCATTCTGTGTGTGATCTGAAGCATGCTCAAGAATCTCATCTGGCTATAAAGGGTTTCCGTTGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAGAGATTCTTACTGAAGAACATGAAGATCCGAGATAAAACAATCCCCACTACTAGTATCCAGGAGTaGACTTGGTCACTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TERFLLKNMKIRDKTIPTTSIQE*TWSLPE Trigger: CTCAGGAAGTGACCAAGTTCACTCCTGGATACTAGT...AGTGGGGATTGTTTTATCTCGGATCTTCATGTTCTTCAGTAAGAATCTCTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | ATCACACACAGAATGGACCAGTTTATAAAGGACATGAACAGGATTGCCAGCTGCCTCTTGCACAATAACTaGGTAAATCTACTTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ITHRMDQFIKDMNRIASCLLHNN*VNLLLP Trigger: AGGCAGAAGTAGATTTACTCAGTTATTGTGCAAGAG...GCAGCTGGCAATCCTGTTCATGTCCTTTATAAACTGGTCCATTCTGTGTGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | ATCACTTATCATCGGCGAAGTGTTTTCATTGCTGAATTCTTGAACAAGTCAATGTCAGGTGATTCATCATaGAGCTCAAAGGATCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ITYHRRSVFIAEFLNKSMSGDSS*SSKDPA Trigger: CGCCGGATCCTTTGAGCTTCATGATGAATCACCTGA...CATTGACTTGTTCAAGAATTCAGCAATGAAAACACTTCGCCGATGATAAGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTGAGCACCTTCCTAGGAAACACAATATCTGCTATACTAGCTCATTCATGGTTTTTCCTTCATCCATaGTGGGAAGGAGAGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLSTFLGNTISAILAHSWFFLHP*WEGEAL Trigger: CAAGGCCTCTCCTTCCCATCATGGATGAAGGAAAAA...CCATGAATGAGCTAGTATAGCAGATATTGTGTTTCCTAGGAAGGTGCTCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAGAGATTCTTACTGAAGAACATGAAGATCCGAGATAAAACAATCCCCACTTTTTTCCTTCATCCATaGTGGGAAGGAGAGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TERFLLKNMKIRDKTIPTFFLHP*WEGEAL Trigger: CAAGGCCTCTCCTTCCCATCATGGATGAAGGAAAAA...AGTGGGGATTGTTTTATCTCGGATCTTCATGTTCTTCAGTAAGAATCTCTCTGT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGACCCCCAACCATAAAGTTATTCCCTTGCTACTTCATAACTCTAATATCGCACAAGTGTCGCCTATaGAATTCAGGTGATTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: WGPPTIKLFPCYFITLISHKCRL*NSGDSS Trigger: TGATGAATCACCTGAATTCCATAGGCGACACTTGTG...CGATATTAGAGTTATGAAGTAGCAAGGGAATAACTTTATGGTTGGGGGTCCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGACCCCCAACCATAAAGTTATTCCCTTGCTACTTCATAACTCTAATATCGCCTATGGAATTCAGGTaGTTCATCATGAAGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WGPPTIKLFPCYFITLISPMEFR*FIMKLK Trigger: TTTGAGCTTCATGATGAATCACCTGAATTCCATAGG...CGATATTAGAGTTATGAAGTAGCAAGGGAATAACTTTATGGTTGGGGGTCCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGATTCTTGAGCATGCTTCAGATCACACACAGAATGGACCAGTTTATAAAGGGAACAACACAGATCTaGGAGCATCGTAGTTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: MRFLSMLQITHRMDQFIKGTTQI*EHRSYL Trigger: GAGATAACTACGATGCTCTCAGATCTGTGTTGTTCC...CTTTATAAACTGGTCCATTCTGTGTGTGATCTGAAGCATGCTCAAGAATCTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR GCA 90 bp | ATCACTTATCATCGGCGAAGTGTTTTCATTGCTGAATTCTTGAACAAGTCAATGAGAGGCTGTTACACATaGTCCCTCTCTTGTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ITYHRRSVFIAEFLNKSMRGCYT*SLSCGD Trigger: ATCACCACAAGAGAGGGAGCATGTGTAACAGCCTCT...CATTGACTTGTTCAAGAATTCAGCAATGAAAACACTTCGCCGATGATAAGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTGAGCACCTTCCTAGGAAACACAATATCTGCTATACTAGCTCATTCATGGGCAGCACTAAGGACTTaGCTTGTAACTAGTATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLSTFLGNTISAILAHSWAALRT*LVTSIQ Trigger: CTGGATACTAGTTACAAGCCAAGTCCTTAGTGCTGC...CCATGAATGAGCTAGTATAGCAGATATTGTGTTTCCTAGGAAGGTGCTCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGATTCTTGAGCATGCTTCAGATCACACACAGAATGGACCAGTTTATAAAGGCAGCACTAAGGACTTaGCTTGTAACTAGTATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MRFLSMLQITHRMDQFIKAALRT*LVTSIQ Trigger: CTGGATACTAGTTACAAGCCAAGTCCTTAGTGCTGC...CTTTATAAACTGGTCCATTCTGTGTGTGATCTGAAGCATGCTCAAGAATCTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | CAAATTCTCTTTAATCAATGTCTTCTGGGATTCTGGGGCAATGACGCAAACACACTCTTGCACAATAACTaGGTAAATCTACTTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QILFNQCLLGFWGNDANTLLHNN*VNLLLP Trigger: AGGCAGAAGTAGATTTACTCAGTTATTGTGCAAGAG...TGTGTTTGCGTCATTGCCCCAGAATCCCAGAAGACATTGATTAAAGAGAATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| 3UTR CAA 72 bp | ACATGGAAGCCCTGGCTGACTTACTATGTACATTTTTaGAGCACCTTCCTAGGAAACACAATATCTGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: TWKPWLTYYVHF*STFLGNTISAI Trigger: TATAGCAGATATTGTGTTTCCTAGGAAGGTGCTCAAAAAATGTACATAGTAAGTCAGCCAGGGCTTCCATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGATTCTTGAGCATGCTTCAGATCACACACAGAATGGACCAGTTTATAAAGATAAACATGTCAATCTaGTCCAAACCACAAGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: MRFLSMLQITHRMDQFIKINMSI*SKPQVS Trigger: CGACACTTGTGGTTTGGATCAGATTGACATGTTTAT...CTTTATAAACTGGTCCATTCTGTGTGTGATCTGAAGCATGCTCAAGAATCTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 |
||
| CDS-3UTR GCA 90 bp | ACATATAAAGAAACTGTACAATATTACAAACCAGAGGTTGTTTGCGGTGTATGCTTGTTGGTCTTCATTTaGTCATACGCTTCCGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: TYKETVQYYKPEVVCGVCLLVFI*SYASVT Trigger: GGTCACGGAAGCGTATGAGCAAATGAAGACCAACAA...GCATACACCGCAAACAACCTCTGGTTTGTAATATTGTACAGTTTCTTTATATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | CTGTACAATATTACAAACCAGAGGTTGTTTGCGGTGTATGCGCATATACAAATAATCCACCATTTCAGCTaGTGCCCTAAGTATAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LYNITNQRLFAVYAHIQIIHHFS*CPKYKY Trigger: GTATTTATACTTAGGGCATCAGCTGAAATGGTGGAT...TATTTGTATATGCGCATACACCGCAAACAACCTCTGGTTTGTAATATTGTACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAGAGATTCTTACTGAAGAACATGAAGATCCGAGATAAAACAATCCCCACTATCCAGTTACAGCCTTaGGAAAAGAGTAGTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TERFLLKNMKIRDKTIPTIQLQP*EKSSFS Trigger: TGAAAAACTACTCTTTTCTCAAGGCTGTAACTGGAT...AGTGGGGATTGTTTTATCTCGGATCTTCATGTTCTTCAGTAAGAATCTCTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | CTGTACAATATTACAAACCAGAGGTTGTTTGCGGTGTATGCGCATATACAAATAATAAACATGTCAATCTaGTCCAAACCACAAGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LYNITNQRLFAVYAHIQIINMSI*SKPQVS Trigger: CGACACTTGTGGTTTGGATCAGATTGACATGTTTAT...TATTTGTATATGCGCATACACCGCAAACAACCTCTGGTTTGTAATATTGTACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 |
||
| CDS-3UTR CCA 90 bp | CTGTACAATATTACAAACCAGAGGTTGTTTGCGGTGTATGCGCATATACAAATAACTTTCCAAACACATTaGAACCTGTGTACTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYNITNQRLFAVYAHIQITFQTH*NLCTSQ Trigger: CTGAGAAGTACACAGGTTCCAATGTGTTTGGAAAGT...TATTTGTATATGCGCATACACCGCAAACAACCTCTGGTTTGTAATATTGTACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR CCA 90 bp | AAATCCACAGAGAGATTCTTACTGAAGAACATGAAGATCCGAGATAAAACAATCCACAAGTGTCGCCTATaGAATTCAGGTGATTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KSTERFLLKNMKIRDKTIHKCRL*NSGDSS Trigger: TGATGAATCACCTGAATTCCATAGGCGACACTTGTG...GATTGTTTTATCTCGGATCTTCATGTTCTTCAGTAAGAATCTCTCTGTGGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | TTTTATCTTTACTTGAAGAGAATACCCGAGTATAAACATGTCAATCTGGACAGCATCCACCATTTCAGCTaGTGCCCTAAGTATAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: FYLYLKRIPEYKHVNLDSIHHFS*CPKYKY Trigger: GTATTTATACTTAGGGCATCAGCTGAAATGGTGGAT...GCTGTCCAGATTGACATGTTTATACTCGGGTATTCTCTTCAAGTAAAGATAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGACATATAAAGAAACTGTACAATATTACAAACCAGAGGTTGTTTGCGGTGCCTATGGAATTCAGGTaGTTCATCATGAAGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CRHIKKLYNITNQRLFAVPMEFR*FIMKLK Trigger: TTTGAGCTTCATGATGAATCACCTGAATTCCATAGG...CACCGCAAACAACCTCTGGTTTGTAATATTGTACAGTTTCTTTATATGTCTACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR TCA 90 bp | ACATATAAAGAAACTGTACAATATTACAAACCAGAGGTTGTTTGCGGTGTATGCATCCAGTTACAGCCTTaGGAAAAGAGTAGTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TYKETVQYYKPEVVCGVCIQLQP*EKSSFS Trigger: TGAAAAACTACTCTTTTCTCAAGGCTGTAACTGGAT...GCATACACCGCAAACAACCTCTGGTTTGTAATATTGTACAGTTTCTTTATATGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS TCA 90 bp | CTCCAGGCAGCACTAAGGACTTGGCTTGTAACTAGTATCCAGGAGTaGACTTGGTCACTTCCTGAGGTGGTCCGAGCGCGCTCCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQAALRTWLVTSIQE*TWSLPEVVRARSRS Trigger: GGAGCGGGAGCGCGCTCGGACCACCTCAGGAAGTGACCAAGTTCACTCCTGGATACTAGTTACAAGCCAAGTCCTTAGTGCTGCCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR CAA 90 bp | TCCCGGGCCACAGCCATCCTCTCGGAACAGGCATGTGACTGGCTAACTGAAACCTCATCACAAAGGCCCTaGCTATTCTCCAGGCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SRATAILSEQACDWLTETSSQRP*LFSRQH Trigger: GTGCTGCCTGGAGAATAGCAAGGGCCTTTGTGATGA...GGTTTCAGTTAGCCAGTCACATGCCTGTTCCGAGAGGATGGCTGTGGCCCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGGCGAACCACCCGTCTCTCTCCACCCATCTCGATGCCCTCCTTGGCTGTCTCTGGAGTTAAACTaGAACAGTCGAAACACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TEGEPPVSLHPSRCPPWLSLELN*NSRNTF Trigger: AAAAGTGTTTCGACTGTTCAAGTTTAACTCCAGAGA...CAGCCAAGGAGGGCATCGAGATGGGTGGAGAGAGACGGGTGGTTCGCCTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 |
||
| CDS TCA 90 bp | ATGGCGTCGGAGAAGAGGCTGTTACACATGCTCCCTCTCTTGTGGTaGTCTCTCATCCCACTAAACTCAGTCCACTGCAGTTTCAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: MASEKRLLHMLPLLW*SLIPLNSVHCSFSN Trigger: GTTACTGAAACTGCAGTGGACTGAGTTTAGTGGGATGAGAGATCACCACAAGAGAGGGAGCATGTGTAACAGCCTCTTCTCCGACGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR CAA 90 bp | CCACAGGTTGAGAACCACAGCTCTAGGAATACGGGTTTGAATTTAAGCCTGTACTCATCACAAAGGCCCTaGCTATTCTCCAGGCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PQVENHSSRNTGLNLSLYSSQRP*LFSRQH Trigger: GTGCTGCCTGGAGAATAGCAAGGGCCTTTGTGATGA...GTACAGGCTTAAATTCAAACCCGTATTCCTAGAGCTGTGGTTCTCAACCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS TCA 90 bp | TACTTCTCAGGCCCGAAACTGTACTGCTGGATCCAGTTACAGCCTTaGGAAAAGAGTAGTTTTTCAGGAAGCTTCCGCATCAGTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: YFSGPKLYCWIQLQP*EKSSFSGSFRISLA Trigger: TGCCAGACTGATGCGGAAGCTTCCTGAAAAACTACTCTTTTCTCAAGGCTGTAACTGGATCCAGCAGTACAGTTTCGGGCCTGAGAAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100739.5 |
||
| CDS-3UTR CAA 90 bp | AATCAATGTCTTCTGGGATTCTGGGGCAATGACGCAAACACATCTGTATCTGGATCATCACAAAGGCCCTaGCTATTCTCCAGGCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NQCLLGFWGNDANTSVSGSSQRP*LFSRQH Trigger: GTGCTGCCTGGAGAATAGCAAGGGCCTTTGTGATGA...TCCAGATACAGATGTGTTTGCGTCATTGCCCCAGAATCCCAGAAGACATTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS GCA 90 bp | AACAGGAGTCTGAAAAGGCTGGGGATAACCTTGTTGGTCTTCATTTaGTCATACGCTTCCGTGACCTGCAGTTTCAGTAACTCCACACAT | + |
|
Preference number: 5 (lower is better) Translates to: NRSLKRLGITLLVFI*SYASVTCSFSNSTH Trigger: ATGTGTGGAGTTACTGAAACTGCAGGTCACGGAAGCGTATGAGCAAATGAAGACCAACAAGGTTATCCCCAGCCTTTTCAGACTCCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226581.2 |
||
| CDS-3UTR CAA 90 bp | ATCACACACAGAATGGACCAGTTTATAAAGGACATGAACAGGATTGCCAGCTGCCTGGGGATAACCTTGTaGGTCTTCATTTGCTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: ITHRMDQFIKDMNRIASCLGITL*VFICSY Trigger: GTATGAGCAAATGAAGACCAACAAGGTTATCCCCAG...GCAGCTGGCAATCCTGTTCATGTCCTTTATAAACTGGTCCATTCTGTGTGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR CAA 90 bp | CCACAGGTTGAGAACCACAGCTCTAGGAATACGGGTTTGAATTTAAGCCTGTACAACTTTCCAAACACATaGGAACCTGTGTACTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PQVENHSSRNTGLNLSLYNFPNT*EPVYFS Trigger: TGAGAAGTACACAGGTTCCAATGTGTTTGGAAAGTT...GTACAGGCTTAAATTCAAACCCGTATTCCTAGAGCTGTGGTTCTCAACCTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS GCA 90 bp | CTGGAACAACACAGATCTGAGAGCATCGTAGTTATCTCTCTTGACTaGTCGAACACATTTAATATGGTGCCTCCAGAACAATTCCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: LEQHRSESIVVISLD*SNTFNMVPPEQFLI Trigger: TATGAGGAATTGTTCTGGAGGCACCATATTAAATGTGTTCGAGCAGTCAAGAGAGATAACTACGATGCTCTCAGATCTGTGTTGTTCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR CAA 90 bp | CAAATTCTCTTTAATCAATGTCTTCTGGGATTCTGGGGCAATGACGCAAACACAAACTTTCCAAACACATaGGAACCTGTGTACTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QILFNQCLLGFWGNDANTNFPNT*EPVYFS Trigger: TGAGAAGTACACAGGTTCCAATGTGTTTGGAAAGTT...TGTGTTTGCGTCATTGCCCCAGAATCCCAGAAGACATTGATTAAAGAGAATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
||
| CDS-3UTR CAA 90 bp | CACCTTCCTAGGAAACACAATATCTGCTATACTAGCTCATTCATGGATTTAACACTGGGGATAACCTTGTaGGTCTTCATTTGCTCATAC | + |
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Preference number: 5 (lower is better) Translates to: HLPRKHNICYTSSFMDLTLGITL*VFICSY Trigger: GTATGAGCAAATGAAGACCAACAAGGTTATCCCCAG...TGTTAAATCCATGAATGAGCTAGTATAGCAGATATTGTGTTTCCTAGGAAGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| CDS-3UTR CAA 90 bp | ACATATAAAGAAACTGTACAATATTACAAACCAGAGGTTGTTTGCGGTGTATGCCTGGGGATAACCTTGTaGGTCTTCATTTGCTCATAC | + |
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Preference number: 5 (lower is better) Translates to: TYKETVQYYKPEVVCGVCLGITL*VFICSY Trigger: GTATGAGCAAATGAAGACCAACAAGGTTATCCCCAG...GCATACACCGCAAACAACCTCTGGTTTGTAATATTGTACAGTTTCTTTATATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| CDS-3UTR CAA 90 bp | CACCTTCCTAGGAAACACAATATCTGCTATACTAGCTCATTCATGGATTTAACATCTCTGGAGTTAAACTaGAACAGTCGAAACACTTTT | + |
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Preference number: 5 (lower is better) Translates to: HLPRKHNICYTSSFMDLTSLELN*NSRNTF Trigger: AAAAGTGTTTCGACTGTTCAAGTTTAACTCCAGAGA...TGTTAAATCCATGAATGAGCTAGTATAGCAGATATTGTGTTTCCTAGGAAGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 |
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| CDS CCA 72 bp | CTAGTATCCAGGAGTGAACTTGGTCACTTCCTGAGGTaGTCCGAGCGCGCTCCCGCTCCCGCGGCGCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LVSRSELGHFLR*SERAPAPAARS Trigger: GGAGCGCGCCGCGGGAGCGGGAGCGCGCTCGGACCACCTCAGGAAGTGACCAAGTTCACTCCTGGATACTAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| CDS CCA 72 bp | TCCAGAACAATTCCTCATAGGCCTTCCGCATCAGTCTaGCACGCGGGGCTTCTCCCTTCCACTCTCTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: SRTIPHRPSASV*HAGLLPSTLLH Trigger: GTGCAAGAGAGTGGAAGGGAGAAGCCCCGCGTGCCAGACTGATGCGGAAGGCCTATGAGGAATTGTTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| CDS TCA 72 bp | GCACTAAGGACTTGGCTTGTAACTAGTATCCAGGAGTaGACTTGGTCACTTCCTGAGGTGGTCCGAGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: ALRTWLVTSIQE*TWSLPEVVRAR Trigger: GCGCGCTCGGACCACCTCAGGAAGTGACCAAGTTCACTCCTGGATACTAGTTACAAGCCAAGTCCTTAGTGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| CDS TCA 72 bp | GGCCCGAAACTGTACTGCTGGATCCAGTTACAGCCTTaGGAAAAGAGTAGTTTTTCAGGAAGCTTCCGCATC | + |
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Preference number: 6 (lower is better) Translates to: GPKLYCWIQLQP*EKSSFSGSFRI Trigger: GATGCGGAAGCTTCCTGAAAAACTACTCTTTTCTCAAGGCTGTAACTGGATCCAGCAGTACAGTTTCGGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100739.5 |
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| CDS TCA 72 bp | GGCAGGACCATGACTAGCAAGAAGTCAGGAGAAAACTaGTCCAAACCACAAGTGTCGCCTATGGAATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GRTMTSKKSGEN*SKPQVSPMEFR Trigger: CCTGAATTCCATAGGCGACACTTGTGGTTTGGATCAGTTTTCTCCTGACTTCTTGCTAGTCATGGTCCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226170.2 |
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| CDS GCA 72 bp | CTGAAAAGGCTGGGGATAACCTTGTTGGTCTTCATTTaGTCATACGCTTCCGTGACCTGCAGTTTCAGTAAC | + |
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Preference number: 6 (lower is better) Translates to: LKRLGITLLVFI*SYASVTCSFSN Trigger: GTTACTGAAACTGCAGGTCACGGAAGCGTATGAGCAAATGAAGACCAACAAGGTTATCCCCAGCCTTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226581.2 |
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| CDS CAA 90 bp | TGCAGTTTCAGTAACTCCACACATTTCCGTAACTTTCCAAACACATaGGAACCTGTGTACTTCTCAGGCCCGAAACTGTACTGCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: CSFSNSTHFRNFPNT*EPVYFSGPKLYCWI Trigger: GATCCAGCAGTACAGTTTCGGGCCTGAGAAGTACACAGGTTCCAATGTGTTTGGAAAGTTACGGAAATGTGTGGAGTTACTGAAACTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 ENSMUST00000226170.2 ENSMUST00000226581.2 |
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| CDS TCA 72 bp | TTCAGGAAGCTTAACGATGTCTTTTTCCTTCATCCATaGTGGGAAGGAGAGGCCTTGGCTGAAGATCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: FRKLNDVFFLHP*WEGEALAEDLE Trigger: TTCCAGATCTTCAGCCAAGGCCTCTCCTTCCCATCATGGATGAAGGAAAAAGACATCGTTAAGCTTCCTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226145.2 ENSMUST00000226170.2 ENSMUST00000226581.2 |
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| CDS TCA 72 bp | GGCCCGAAACTGTACTGCTGGATCCAGTTACAGCCTTaGGAAAAGAGTAGTTTTTCAGGAAGCTTAACGATG | + |
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Preference number: 6 (lower is better) Translates to: GPKLYCWIQLQP*EKSSFSGSLTM Trigger: CATCGTTAAGCTTCCTGAAAAACTACTCTTTTCTCAAGGCTGTAACTGGATCCAGCAGTACAGTTTCGGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226145.2 ENSMUST00000226170.2 ENSMUST00000226581.2 |
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| CDS GCA 72 bp | CACAGATCTGAGAGCATCGTAGTTATCTCTCTTGACTaGTCGAACACATTTAATATGGTGCCTCCAGAACAA | + |
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Preference number: 6 (lower is better) Translates to: HRSESIVVISLD*SNTFNMVPPEQ Trigger: TTGTTCTGGAGGCACCATATTAAATGTGTTCGAGCAGTCAAGAGAGATAACTACGATGCTCTCAGATCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226145.2 ENSMUST00000226170.2 |
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| CDS GCA 72 bp | TTGTTGGTCTTCATTTGCTCATACGCTTCCGTGACCTaGAGTTTCAGTAACTCCACACATTTCCGTAACTTT | + |
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Preference number: 6 (lower is better) Translates to: LLVFICSYASVT*SFSNSTHFRNF Trigger: AAAGTTACGGAAATGTGTGGAGTTACTGAAACTGCAGGTCACGGAAGCGTATGAGCAAATGAAGACCAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226581.2 |
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| CDS CAA 90 bp | GTCTCTGGAGTTAAACTTGAACAGTCGAAACACTTTTATCTTTACTaGAAGAGAATACCCGAGTATAAACATGTCAATCTGATCCAAACC | + |
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Preference number: 6 (lower is better) Translates to: VSGVKLEQSKHFYLY*KRIPEYKHVNLIQT Trigger: GGTTTGGATCAGATTGACATGTTTATACTCGGGTATTCTCTTCAAGTAAAGATAAAAGTGTTTCGACTGTTCAAGTTTAACTCCAGAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100739.5 ENSMUST00000226145.2 |
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