Pregenerated sensors for OTULIN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046034Ensembl transcript IDs: ENSMUST00000059662.8, ENSMUST00000228179.2, ENSMUST00000228439.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCTCCAGGGGCCCGAGAGTTCTCCCAGATTGTCCTTGGAGACCTaGAGATCTGAGGCCCCCAGAGGAGGAGCTGCACATGCGCATCTC | + |
|
Preference number: 1 (lower is better) Translates to: WLQGPESSPRLSLET*RSEAPRGGAAHAHL Trigger: GAGATGCGCATGTGCAGCTCCTCCTCTGGGGGCCTCAGATCTGCAGGTCTCCAAGGACAATCTGGGAGAACTCTCGGGCCCCTGGAGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| 3UTR TCA 90 bp | GGGGCCCGAGAGTTCTCCCAGATTGTCCTTGGAGACCTGCAGATCTaGGGCCCCCAGAGGAGGAGCTGCACATGCGCATCTCTTGGCAGT | + |
|
Preference number: 1 (lower is better) Translates to: GAREFSQIVLGDLQI*GPQRRSCTCASLGS Trigger: ACTGCCAAGAGATGCGCATGTGCAGCTCCTCCTCTGGGGGCCTCAGATCTGCAGGTCTCCAAGGACAATCTGGGAGAACTCTCGGGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| 3UTR GCA 90 bp | CAGCTCGGCCAGCTGGCTCATGGCCTGGAACAGTGTGGCCCTCAGTaGACAGTAGTTATCACCACGGACTCGCCTTATGGAAGTGAATTT | + |
|
Preference number: 1 (lower is better) Translates to: QLGQLAHGLEQCGPQ*TVVITTDSPYGSEF Trigger: AAATTCACTTCCATAAGGCGAGTCCGTGGTGATAACTACTGTGCACTGAGGGCCACACTGTTCCAGGCCATGAGCCAGCTGGCCGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR GCA 90 bp | CTGTACTCCTCCTCTTCGTTGGTGAACAGCTCATCACAAGCTGTCTaGCTCGCTTCAGCAGTTTTCATTGCAGCCAGGCTTACCCACTTC | + |
|
Preference number: 1 (lower is better) Translates to: LYSSSSLVNSSSQAV*LASAVFIAARLTHF Trigger: GAAGTGGGTAAGCCTGGCTGCAATGAAAACTGCTGAAGCGAGGCAGACAGCTTGTGATGAGCTGTTCACCAACGAAGAGGAGGAGTACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR TCA 90 bp | GGAACTTCACAGCTTCGTAGAGGCTGTACTCCTCCTCTTCGTTGGTaGACAGCTCATCACAAGCTGTCTGCCTCGCTTCAGCAGTTTTCA | + |
|
Preference number: 1 (lower is better) Translates to: GTSQLRRGCTPPLRW*TAHHKLSASLQQFS Trigger: TGAAAACTGCTGAAGCGAGGCAGACAGCTTGTGATGAGCTGTTCACCAACGAAGAGGAGGAGTACAGCCTCTACGAAGCTGTGAAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR GCA 90 bp | TTGCACCTTCCAAAGGCACGTGCTGAAGCCCCCAGTGGAACACACTaGATAACAGAACAAGGAGTGAAGGCTTGGCTAATTAATTCTCAT | + |
|
Preference number: 1 (lower is better) Translates to: LHLPKARAEAPSGTH*ITEQGVKAWLINSH Trigger: ATGAGAATTAATTAGCCAAGCCTTCACTCCTTGTTCTGTTATGCAGTGTGTTCCACTGGGGGCTTCAGCACGTGCCTTTGGAAGGTGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| 3UTR CCA 90 bp | AGAACGGCACTTCCTTTCCCTTCTCCTTGTCATCGTACAGTTCGATaGCTCTGTTTAACATCAGGAACTTCACAGCTTCGTAGAGGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: RTALPFPSPCHRTVR*LCLTSGTSQLRRGC Trigger: ACAGCCTCTACGAAGCTGTGAAGTTCCTGATGTTAAACAGAGCCATCGAACTGTACGATGACAAGGAGAAGGGAAAGGAAGTGCCGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR TCA 90 bp | CCCTCAGTGCACAGTAGTTATCACCACGGACTCGCCTTATGGAAGTaGATTTCTGAGACACTTCCTCATAGCCCTTTTTCATACATGTGG | + |
|
Preference number: 1 (lower is better) Translates to: PSVHSSYHHGLALWK*ISETLPHSPFSYMW Trigger: CCACATGTATGAAAAAGGGCTATGAGGAAGTGTCTCAGAAATTCACTTCCATAAGGCGAGTCCGTGGTGATAACTACTGTGCACTGAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR GCA 90 bp | ACCAGGTCCTCACTCTTCCCATCAAATTTCAGTCCAAGTTTCCACTaGTTGATCCAGGTATACTTGTTTATCAGCTTCTCTGGTAACAGT | + |
|
Preference number: 1 (lower is better) Translates to: TRSSLFPSNFSPSFH*LIQVYLFISFSGNS Trigger: ACTGTTACCAGAGAAGCTGATAAACAAGTATACCTGGATCAAGCAGTGGAAACTTGGACTGAAATTTGATGGGAAGAGTGAGGACCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCAACCAGGTCCTCACTCTTCCCATCAAATTTCAGTCCAAGTTTCCACTGCTCGGCCAGCTGGCTCATaGCCTGGAACAGTGTGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: FQPGPHSSHQISVQVSTARPAGS*PGTVWP Trigger: GGGCCACACTGTTCCAGGCCATGAGCCAGCTGGCCG...AGCAGTGGAAACTTGGACTGAAATTTGATGGGAAGAGTGAGGACCTGGTTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCCCCCAGTGGAACACACTGCATAACAGAACAAGGAGTGAAGGCTTGGCTAATTTGTCCTTGGAGACCTaGAGATCTGAGGCCCCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: SPQWNTLHNRTRSEGLANLSLET*RSEAPR Trigger: TCTGGGGGCCTCAGATCTGCAGGTCTCCAAGGACAA...ATTAGCCAAGCCTTCACTCCTTGTTCTGTTATGCAGTGTGTTCCACTGGGGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCCTCTTCGTTGGTGAACAGCTCATCACAAGCTGTCTGCCTCGCTTCAGCACAAGTTTCCACTGCTTaGTCCAGGTATACTTGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: SSSSLVNSSSQAVCLASAQVSTA*SRYTCL Trigger: TAAACAAGTATACCTGGATCAAGCAGTGGAAACTTG...TGCTGAAGCGAGGCAGACAGCTTGTGATGAGCTGTTCACCAACGAAGAGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCTTCGTAGAGGCTGTACTCCTCCTCTTCGTTGGTGAACAGCTCATCACAAGCAGTCCAAGTTTCCACTaGTTGATCCAGGTATACTTG | + |
|
Preference number: 2 (lower is better) Translates to: SFVEAVLLLFVGEQLITSSPSFH*LIQVYL Trigger: CAAGTATACCTGGATCAAGCAGTGGAAACTTGGACT...GCTTGTGATGAGCTGTTCACCAACGAAGAGGAGGAGTACAGCCTCTACGAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR CAA 90 bp | GCAAACAAGAGCACAGAGAAGAACGGCACTTCCTTTCCCTTCTCCTaGTCATCGTACAGTTCGATGGCTCTGTTTAACATCAGGAACTTC | + |
|
Preference number: 2 (lower is better) Translates to: ANKSTEKNGTSFPFS*SSYSSMALFNIRNF Trigger: GAAGTTCCTGATGTTAAACAGAGCCATCGAACTGTACGATGACAAGGAGAAGGGAAAGGAAGTGCCGTTCTTCTCTGTGCTCTTGTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTCTGTTTAACATCAGGAACTTCACAGCTTCGTAGAGGCTGTACTCCTCCTCTCGCCTTATGGAAGTaGATTTCTGAGACACTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: WLCLTSGTSQLRRGCTPPLALWK*ISETLP Trigger: AGGAAGTGTCTCAGAAATTCACTTCCATAAGGCGAG...AGGAGGAGTACAGCCTCTACGAAGCTGTGAAGTTCCTGATGTTAAACAGAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAGTTTGCACCTTCCAAAGGCACGTGCTGAAGCCCCCAGTGGAACACACTGCACAAGGAGTGAAGGCTTaGCTAATTAATTCTCATTAT | + |
|
Preference number: 2 (lower is better) Translates to: IVCTFQRHVLKPPVEHTAQGVKA*LINSHY Trigger: ATAATGAGAATTAATTAGCCAAGCCTTCACTCCTTG...TGCAGTGTGTTCCACTGGGGGCTTCAGCACGTGCCTTTGGAAGGTGCAAACTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGTTTACCGTCAGAACTTTCATTGGACAGATTCCTTTCCAAACAGTTTTCTTTAGGAGGAGCTGCACATaGGCATCTCTTGGCAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: QFTVRTFIGQIPFQTVFFRRSCT*ASLGSH Trigger: GTGACTGCCAAGAGATGCGCATGTGCAGCTCCTCCT...AAAGAAAACTGTTTGGAAAGGAATCTGTCCAATGAAAGTTCTGACGGTAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| 3UTR CAA 90 bp | CCATCAAATTTCAGTCCAAGTTTCCACTGCTTGATCCAGGTATACTaGTTTATCAGCTTCTCTGGTAACAGTATGAGCTCCAAGTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PSNFSPSFHCLIQVY*FISFSGNSMSSKSC Trigger: GCAGGACTTGGAGCTCATACTGTTACCAGAGAAGCTGATAAACAAGTATACCTGGATCAAGCAGTGGAAACTTGGACTGAAATTTGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR CAA 90 bp | AGGTCCTCACTCTTCCCATCAAATTTCAGTCCAAGTTTCCACTGCTaGATCCAGGTATACTTGTTTATCAGCTTCTCTGGTAACAGTATG | + |
|
Preference number: 2 (lower is better) Translates to: RSSLFPSNFSPSFHC*IQVYLFISFSGNSM Trigger: CATACTGTTACCAGAGAAGCTGATAAACAAGTATACCTGGATCAAGCAGTGGAAACTTGGACTGAAATTTGATGGGAAGAGTGAGGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTGTCATCGTACAGTTCGATGGCTCTGTTTAACATCAGGAACTTCACAGCTATACATGTGGCTTTCTaGGTATTTCCTCTCCATTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLSSYSSMALFNIRNFTAIHVAF*VFPLHS Trigger: AGAATGGAGAGGAAATACTCAGAAAGCCACATGTAT...AGCTGTGAAGTTCCTGATGTTAAACAGAGCCATCGAACTGTACGATGACAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTGTCATCGTACAGTTCGATGGCTCTGTTTAACATCAGGAACTTCACAGCTCCTTTTTCATACATGTaGCTTTCTGAGTATTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: SLSSYSSMALFNIRNFTAPFSYM*LSEYFL Trigger: GAGGAAATACTCAGAAAGCCACATGTATGAAAAAGG...AGCTGTGAAGTTCCTGATGTTAAACAGAGCCATCGAACTGTACGATGACAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR CCA 72 bp | GGCTCCAGGGGCCCGAGAGTTCTCCCAGATTGTCCTTaGAGACCTGCAGATCTGAGGCCCCCAGAGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GSRGPRVLPDCP*RPADLRPPEEE Trigger: CTCCTCCTCTGGGGGCCTCAGATCTGCAGGTCTCCAAGGACAATCTGGGAGAACTCTCGGGCCCCTGGAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| 3UTR GCA 72 bp | GGGCCCGAGAGTTCTCCCAGATTGTCCTTGGAGACCTaGAGATCTGAGGCCCCCAGAGGAGGAGCTGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: GPESSPRLSLET*RSEAPRGGAAH Trigger: ATGTGCAGCTCCTCCTCTGGGGGCCTCAGATCTGCAGGTCTCCAAGGACAATCTGGGAGAACTCTCGGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| 3UTR CCA 72 bp | GCAGCTCGGCCAGCTGGCTCATGGCCTGGAACAGTGTaGCCCTCAGTGCACAGTAGTTATCACCACGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: AARPAGSWPGTV*PSVHSSYHHGL Trigger: GAGTCCGTGGTGATAACTACTGTGCACTGAGGGCCACACTGTTCCAGGCCATGAGCCAGCTGGCCGAGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR TCA 72 bp | GAGTTCTCCCAGATTGTCCTTGGAGACCTGCAGATCTaGGGCCCCCAGAGGAGGAGCTGCACATGCGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: EFSQIVLGDLQI*GPQRRSCTCAS Trigger: AGATGCGCATGTGCAGCTCCTCCTCTGGGGGCCTCAGATCTGCAGGTCTCCAAGGACAATCTGGGAGAACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGTTCTCCCAGATTGTCCTTGGAGACCTGCAGATCTGAGGCCCCCAGAGGAGCACATGCGCATCTCTaGGCAGTCACATGTGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ESSPRLSLETCRSEAPRGAHAHL*AVTCVS Trigger: GGACACACATGTGACTGCCAAGAGATGCGCATGTGC...TCCTCTGGGGGCCTCAGATCTGCAGGTCTCCAAGGACAATCTGGGAGAACTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| 3UTR GCA 72 bp | CAGCTGGCTCATGGCCTGGAACAGTGTGGCCCTCAGTaGACAGTAGTTATCACCACGGACTCGCCTTATGGA | + |
|
Preference number: 3 (lower is better) Translates to: QLAHGLEQCGPQ*TVVITTDSPYG Trigger: TCCATAAGGCGAGTCCGTGGTGATAACTACTGTGCACTGAGGGCCACACTGTTCCAGGCCATGAGCCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR TCA 72 bp | CAGCTTCGTAGAGGCTGTACTCCTCCTCTTCGTTGGTaGACAGCTCATCACAAGCTGTCTGCCTCGCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QLRRGCTPPLRW*TAHHKLSASLQ Trigger: CTGAAGCGAGGCAGACAGCTTGTGATGAGCTGTTCACCAACGAAGAGGAGGAGTACAGCCTCTACGAAGCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTTTTCATTGCAGCCAGGCTTACCCACTTCTTCCTTAGCAGGGCAAGGGATTTGATCCAGGTATACTaGTTTATCAGCTTCTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: AVFIAARLTHFFLSRARDLIQVY*FISFSG Trigger: ACCAGAGAAGCTGATAAACAAGTATACCTGGATCAA...ATCCCTTGCCCTGCTAAGGAAGAAGTGGGTAAGCCTGGCTGCAATGAAAACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR CCA 72 bp | CTTCCTTTCCCTTCTCCTTGTCATCGTACAGTTCGATaGCTCTGTTTAACATCAGGAACTTCACAGCTTCGT | + |
|
Preference number: 3 (lower is better) Translates to: LPFPSPCHRTVR*LCLTSGTSQLR Trigger: ACGAAGCTGTGAAGTTCCTGATGTTAAACAGAGCCATCGAACTGTACGATGACAAGGAGAAGGGAAAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR TCA 72 bp | CACAGTAGTTATCACCACGGACTCGCCTTATGGAAGTaGATTTCTGAGACACTTCCTCATAGCCCTTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HSSYHHGLALWK*ISETLPHSPFS Trigger: TGAAAAAGGGCTATGAGGAAGTGTCTCAGAAATTCACTTCCATAAGGCGAGTCCGTGGTGATAACTACTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR TCA 72 bp | TCTTCCCATCAAATTTCAGTCCAAGTTTCCACTGCTTaGTCCAGGTATACTTGTTTATCAGCTTCTCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SSHQISVQVSTA*SRYTCLSASLV Trigger: TACCAGAGAAGCTGATAAACAAGTATACCTGGATCAAGCAGTGGAAACTTGGACTGAAATTTGATGGGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| 3UTR GCA 72 bp | TCACTCTTCCCATCAAATTTCAGTCCAAGTTTCCACTaGTTGATCCAGGTATACTTGTTTATCAGCTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLFPSNFSPSFH*LIQVYLFISFS Trigger: AGAGAAGCTGATAAACAAGTATACCTGGATCAAGCAGTGGAAACTTGGACTGAAATTTGATGGGAAGAGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGACCTGCAGATCTGAGGCCCCCAGAGGAGGAGCTGCACATGCGCATCTCTCGTCTCGGCGCAGCTTaGACCGGGCCACGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WRPADLRPPEEELHMRISRLGAA*TGPRSG Trigger: CCCGGAGCGTGGCCCGGTGCAAGCTGCGCCGAGACG...AGAGATGCGCATGTGCAGCTCCTCCTCTGGGGGCCTCAGATCTGCAGGTCTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCACGTGCTGAAGCCCCCAGTGGAACACACTGCATAACAGAACAAGGAGTGCGGCCAGCTGGCTCATaGCCTGGAACAGTGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KARAEAPSGTHCITEQGVRPAGS*PGTVWP Trigger: GGGCCACACTGTTCCAGGCCATGAGCCAGCTGGCCG...CACTCCTTGTTCTGTTATGCAGTGTGTTCCACTGGGGGCTTCAGCACGTGCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGTTCTCCCAGATTGTCCTTGGAGACCTGCAGATCTGAGGCCCCCAGAGGAAGCTGGCTCATGGCCTaGAACAGTGTGGCCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ESSPRLSLETCRSEAPRGSWLMA*NSVALS Trigger: ACTGAGGGCCACACTGTTCCAGGCCATGAGCCAGCT...TCCTCTGGGGGCCTCAGATCTGCAGGTCTCCAAGGACAATCTGGGAGAACTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGATCTGAGGCCCCCAGAGGAGGAGCTGCACATGCGCATCTCTTGGCAGTCCCCACCTGGTTTAGGTaGTTCCTCAGGAGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CRSEAPRGGAAHAHLLAVPTWFR*FLRSCS Trigger: TGAACAGCTCCTGAGGAACCACCTAAACCAGGTGGG...GACTGCCAAGAGATGCGCATGTGCAGCTCCTCCTCTGGGGGCCTCAGATCTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGATTGTCCTTGGAGACCTGCAGATCTGAGGCCCCCAGAGGAGGAGCTGCATCTCCTCACACACTCTaGCAGGGATGTTATAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRLSLETCRSEAPRGGAASPHTL*QGCYSA Trigger: GGCACTATAACATCCCTGTCAGAGTGTGTGAGGAGA...TGCAGCTCCTCCTCTGGGGGCCTCAGATCTGCAGGTCTCCAAGGACAATCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTCCAGGGGCCCGAGAGTTCTCCCAGATTGTCCTTGGAGACCTGCAGATCTCAGTGTGGCCCTCAGTaGACAGTAGTTATCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: WLQGPESSPRLSLETCRSQCGPQ*TVVITT Trigger: CGTGGTGATAACTACTGTGCACTGAGGGCCACACTG...AGATCTGCAGGTCTCCAAGGACAATCTGGGAGAACTCTCGGGCCCCTGGAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR GCA 90 bp | ACACTTCCTCATAGCCCTTTTTCATACATGTGGCTTTCTGAGTATTTCCTCTCCCGTCTCGGCGCAGCTTaGACCGGGCCACGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLPHSPFSYMWLSEYFLSRLGAA*TGPRSG Trigger: CCCGGAGCGTGGCCCGGTGCAAGCTGCGCCGAGACG...GGAGAGGAAATACTCAGAAAGCCACATGTATGAAAAAGGGCTATGAGGAAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCGAGAGTTCTCCCAGATTGTCCTTGGAGACCTGCAGATCTGAGGCCCCCATCATCACAAGCTGTCTaGCTCGCTTCAGCAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPRVLPDCPWRPADLRPPSSQAV*LASAVF Trigger: GAAAACTGCTGAAGCGAGGCAGACAGCTTGTGATGA...TGGGGGCCTCAGATCTGCAGGTCTCCAAGGACAATCTGGGAGAACTCTCGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGACCTGCAGATCTGAGGCCCCCAGAGGAGGAGCTGCACATGCGCATCTCTGAGCCACACTTAACCTaGGTTCTGATATCCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WRPADLRPPEEELHMRISEPHLT*VLISLF Trigger: AAAGAGGGATATCAGAACCCAGGTTAAGTGTGGCTC...AGAGATGCGCATGTGCAGCTCCTCCTCTGGGGGCCTCAGATCTGCAGGTCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGGCCCGAGAGTTCTCCCAGATTGTCCTTGGAGACCTGCAGATCTGAGGCCTTTTGCAGTAGTCCATaGTATCCATTTCAGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGPESSPRLSLETCRSEAFCSSP*YPFQEP Trigger: TGGCTCCTGAAATGGATATCATGGACTACTGCAAAA...GGCCTCAGATCTGCAGGTCTCCAAGGACAATCTGGGAGAACTCTCGGGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCCAGGGGCCCGAGAGTTCTCCCAGATTGTCCTTGGAGACCTGCAGATCTCTCGCCTTATGGAAGTaGATTTCTGAGACACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WLQGPESSPRLSLETCRSLALWK*ISETLP Trigger: AGGAAGTGTCTCAGAAATTCACTTCCATAAGGCGAG...AGATCTGCAGGTCTCCAAGGACAATCTGGGAGAACTCTCGGGCCCCTGGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGATCTGAGGCCCCCAGAGGAGGAGCTGCACATGCGCATCTCTTGGCAGTCAGTCCAAGTTTCCACTaGTTGATCCAGGTATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CRSEAPRGGAAHAHLLAVSPSFH*LIQVYL Trigger: CAAGTATACCTGGATCAAGCAGTGGAAACTTGGACT...GACTGCCAAGAGATGCGCATGTGCAGCTCCTCCTCTGGGGGCCTCAGATCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGGGCCCGAGAGTTCTCCCAGATTGTCCTTGGAGACCTGCAGATCTGAGGCAAGTTTCCACTGCTTaGTCCAGGTATACTTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SRGPRVLPDCPWRPADLRQVSTA*SRYTCL Trigger: TAAACAAGTATACCTGGATCAAGCAGTGGAAACTTG...CCTCAGATCTGCAGGTCTCCAAGGACAATCTGGGAGAACTCTCGGGCCCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGATCTGAGGCCCCCAGAGGAGGAGCTGCACATGCGCATCTCTTGGCAGTCCCTTTTTCATACATGTaGCTTTCTGAGTATTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CRSEAPRGGAAHAHLLAVPFSYM*LSEYFL Trigger: GAGGAAATACTCAGAAAGCCACATGTATGAAAAAGG...GACTGCCAAGAGATGCGCATGTGCAGCTCCTCCTCTGGGGGCCTCAGATCTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTTTACCGTCAGAACTTTCATTGGACAGATTCCTTTCCAAACAGTTTTCGCCGGTACACCCGGATaGTGTGGCGGACAGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: NQFTVRTFIGQIPFQTVFAGTPG*CGGQHR Trigger: CCTATGCTGTCCGCCACAGCATCCGGGTGTACCGGC...GAAAACTGTTTGGAAAGGAATCTGTCCAATGAAAGTTCTGACGGTAAACTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR CCA 90 bp | TTGGACAGATTCCTTTCCAAACAGTTTTCTTTGACCCAAAAGCATCCGCCTTATCCCGTGTGTCCCACCTaGTTTAGGTGGTTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LDRFLSKQFSLTQKHPPYPVCPT*FRWFLR Trigger: CCTGAGGAACCACCTAAACCAGGTGGGACACACGGG...ATAAGGCGGATGCTTTTGGGTCAAAGAAAACTGTTTGGAAAGGAATCTGTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR CCA 90 bp | TTACCGTCAGAACTTTCATTGGACAGATTCCTTTCCAAACAGTTTTCTTTGACCCCATTGGCCAGTCCTTaGGGGGATCAGTGGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSELSLDRFLSKQFSLTPLASP*GDQWGR Trigger: TCTACCCCACTGATCCCCCCAAGGACTGGCCAATGG...GGTCAAAGAAAACTGTTTGGAAAGGAATCTGTCCAATGAAAGTTCTGACGGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR TCA 90 bp | AGCCCCCAGTGGAACACACTGCATAACAGAACAAGGAGTGAAGGCTTGGCTAATATACATGTGGCTTTCTaGGTATTTCCTCTCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPQWNTLHNRTRSEGLANIHVAF*VFPLHS Trigger: AGAATGGAGAGGAAATACTCAGAAAGCCACATGTAT...ATTAGCCAAGCCTTCACTCCTTGTTCTGTTATGCAGTGTGTTCCACTGGGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR CCA 90 bp | TTACCGTCAGAACTTTCATTGGACAGATTCCTTTCCAAACAGTTTTCTTTGACCTGGCCTGGAACAGTGTaGCCCTCAGTGCACAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSELSLDRFLSKQFSLTWPGTV*PSVHSS Trigger: ACTACTGTGCACTGAGGGCCACACTGTTCCAGGCCA...GGTCAAAGAAAACTGTTTGGAAAGGAATCTGTCCAATGAAAGTTCTGACGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR TCA 90 bp | AACCAGTTTACCGTCAGAACTTTCATTGGACAGATTCCTTTCCAAACAGTTTTCGATCATCCTCAGCTATaGGGGTCACCATTGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NQFTVRTFIGQIPFQTVFDHPQL*GSPLAS Trigger: ACTGGCCAATGGTGACCCTCATAGCTGAGGATGATC...GAAAACTGTTTGGAAAGGAATCTGTCCAATGAAAGTTCTGACGGTAAACTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGAACTTTCATTGGACAGATTCCTTTCCAAACAGTTTTCTTTGACCCAAAACCTCTGTGTTATACTTaGACAGCCGGTACACCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRTFIGQIPFQTVFFDPKPLCYT*TAGTPG Trigger: TCCGGGTGTACCGGCTGTCCAAGTATAACACAGAGG...TTTTGGGTCAAAGAAAACTGTTTGGAAAGGAATCTGTCCAATGAAAGTTCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCATTGGACAGATTCCTTTCCAAACAGTTTTCTTTGACCCAAAAGCATCCGTTCAGCAGTTTTCATTaGAGCCAGGCTTACCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLDRFLSKQFSLTQKHPFSSFH*SQAYPL Trigger: AAGTGGGTAAGCCTGGCTGCAATGAAAACTGCTGAA...CGGATGCTTTTGGGTCAAAGAAAACTGTTTGGAAAGGAATCTGTCCAATGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| 3UTR CAA 72 bp | CTCTTCCCATCAAATTTCAGTCCAAGTTTCCACTGCTaGATCCAGGTATACTTGTTTATCAGCTTCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFPSNFSPSFHC*IQVYLFISFSG Trigger: ACCAGAGAAGCTGATAAACAAGTATACCTGGATCAAGCAGTGGAAACTTGGACTGAAATTTGATGGGAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGTTCTCCCAGATTGTCCTTGGAGACCTGCAGATCTGAGGCCCCCAGAGGATCCTCTGTGTTATACTaGGACAGCCGGTACACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ESSPRLSLETCRSEAPRGSSVLY*DSRYTR Trigger: CCGGGTGTACCGGCTGTCCAAGTATAACACAGAGGA...TCCTCTGGGGGCCTCAGATCTGCAGGTCTCCAAGGACAATCTGGGAGAACTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR CAA 90 bp | AGACACTTCCTCATAGCCCTTTTTCATACATGTGGCTTTCTGAGTATTTCCTCTGCGTCTCGGCGCAGCTaGCACCGGGCCACGCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RHFLIALFHTCGFLSISSASRRS*HRATLR Trigger: CCGGAGCGTGGCCCGGTGCAAGCTGCGCCGAGACGC...AGAGGAAATACTCAGAAAGCCACATGTATGAAAAAGGGCTATGAGGAAGTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228439.2 |
||
| CDS CCA 90 bp | GTCCCACCTGGTTTAGGTGGTTCCTCAGGAGCTGTTCAGGGTCATTaGATGTGTCTCGGGCAAACAAGAGCACAGAGAAGAACGGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: VPPGLGGSSGAVQGH*MCLGQTRAQRRTAL Trigger: AAGTGCCGTTCTTCTCTGTGCTCTTGTTTGCCCGAGACACATCCAATGACCCTGAACAGCTCCTGAGGAACCACCTAAACCAGGTGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059662.8 ENSMUST00000228179.2 |
||
| CDS-3UTR CAA 90 bp | GTCAGAACTTTCATTGGACAGATTCCTTTCCAAACAGTTTTCTTTGACCCAAAAGCGTCTCGGCGCAGCTaGCACCGGGCCACGCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VRTFIGQIPFQTVFFDPKASRRS*HRATLR Trigger: CCGGAGCGTGGCCCGGTGCAAGCTGCGCCGAGACGC...TTTTGGGTCAAAGAAAACTGTTTGGAAAGGAATCTGTCCAATGAAAGTTCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTGCACCTTCCAAAGGCACGTGCTGAAGCCCCCAGTGGAACACACTGCATAAGCTGTTCAGGGTCATaGGATGTGTCTCGGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLHLPKARAEAPSGTHCISCSGS*DVSRAN Trigger: GTTTGCCCGAGACACATCCAATGACCCTGAACAGCT...TATGCAGTGTGTTCCACTGGGGGCTTCAGCACGTGCCTTTGGAAGGTGCAAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR CAA 90 bp | ATAGTTTGCACCTTCCAAAGGCACGTGCTGAAGCCCCCAGTGGAACACACTGCATTGATCCAGGTATACTaGTTTATCAGCTTCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IVCTFQRHVLKPPVEHTALIQVY*FISFSG Trigger: ACCAGAGAAGCTGATAAACAAGTATACCTGGATCAA...TGCAGTGTGTTCCACTGGGGGCTTCAGCACGTGCCTTTGGAAGGTGCAAACTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCATTGGACAGATTCCTTTCCAAACAGTTTTCTTTGACCCAAAAGCATCCGCTTCAGCAGTTTTCATaGCAGCCAGGCTTACCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LSLDRFLSKQFSLTQKHPLQQFS*QPGLPT Trigger: AGTGGGTAAGCCTGGCTGCAATGAAAACTGCTGAAG...CGGATGCTTTTGGGTCAAAGAAAACTGTTTGGAAAGGAATCTGTCCAATGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS GCA 72 bp | TCTATTTCATCTGCAGCACGGTACATGTCCTCCTCGTaGTCGGCCGGGCATCGCGTCGCGGCCCGGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SISSAARYMSSS*SAGHRVAARGC Trigger: GCAGCCCCGGGCCGCGACGCGATGCCCGGCCGAGCACGAGGAGGACATGTACCGTGCTGCAGATGAAATAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS CAA 72 bp | GGCTCCCACCTCCCAGTAGAGCCTTGCTTGAATGCTTaGCTCCATAAGCGTCCGCCACCTGACTCGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSHLPVEPCLNA*LHKRPPPDSAA Trigger: TGCTGCCGAGTCAGGTGGCGGACGCTTATGGAGCAAAGCATTCAAGCAAGGCTCTACTGGGAGGTGGGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228179.2 |
||
| CDS CAA 90 bp | AGCAAGTGCGGCTCCCACCTCCCAGTAGAGCCTTGCTTGAATGCTTaGCTCCATAAGCGTCCGCCACCTGACTCGGCAGCATCTCTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: SKCGSHLPVEPCLNA*LHKRPPPDSAASLV Trigger: TACTAGAGATGCTGCCGAGTCAGGTGGCGGACGCTTATGGAGCAAAGCATTCAAGCAAGGCTCTACTGGGAGGTGGGAGCCGCACTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228179.2 |
||
| CDS GCA 72 bp | CCTCTGTGTTATACTTGGACAGCCGGTACACCCGGATaGTGTGGCGGACAGCATAGGCAAGAAGGAACATCT | + |
|
Preference number: 6 (lower is better) Translates to: PLCYTWTAGTPG*CGGQHRQEGTS Trigger: AGATGTTCCTTCTTGCCTATGCTGTCCGCCACAGCATCCGGGTGTACCGGCTGTCCAAGTATAACACAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059662.8 |
||
| CDS CAA 90 bp | TGTCCCACCTGGTTTAGGTGGTTCCTCAGGAGCTGTTCAGGGTCATaGGATGTGTCTCGGGCAAACAAGAGCACAGAGAAGAACGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: CPTWFRWFLRSCSGS*DVSRANKSTEKNGT Trigger: AGTGCCGTTCTTCTCTGTGCTCTTGTTTGCCCGAGACACATCCAATGACCCTGAACAGCTCCTGAGGAACCACCTAAACCAGGTGGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059662.8 ENSMUST00000228179.2 |
||