RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OTUD7A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033510

Ensembl transcript IDs: ENSMUST00000058476.14, ENSMUST00000177511.2, ENSMUST00000177534.2

Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCCGCTCCCCTTGTCGGCCGGCGACGCTCCCGACGCTTTGTCCGTaGGCGACGGCGTGGTCTTCTCCGACGGCGAGGTGCTCGCTGACG +
Preference number: 1 (lower is better)
Translates to: TRSPCRPATLPTLCP*ATAWSSPTARCSLT
Trigger: CGTCAGCGAGCACCTCGCCGTCGGAGAAGACCACGCCGTCGCCCACGGACAAAGCGTCGGGAGCGTCGCCGGCCGACAAGGGGAGCGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CCA 90 bp TGTCGGCCGGCGACGCTCCCGACGCTTTGTCCGTGGGCGACGGCGTaGTCTTCTCCGACGGCGAGGTGCTCGCTGACGCTCCCGATTCCT +
Preference number: 1 (lower is better)
Translates to: CRPATLPTLCPWATA*SSPTARCSLTLPIP
Trigger: AGGAATCGGGAGCGTCAGCGAGCACCTCGCCGTCGGAGAAGACCACGCCGTCGCCCACGGACAAAGCGTCGGGAGCGTCGCCGGCCGACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR TCA 90 bp GTCCGTGGGCGACGGCGTGGTCTTCTCCGACGGCGAGGTGCTCGCTaGCGCTCCCGATTCCTCCTTGCTGCCCTTGCGCGACTTGGACTT +
Preference number: 1 (lower is better)
Translates to: VRGRRRGLLRRRGAR*RSRFLLAALARLGL
Trigger: AAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCACCTCGCCGTCGGAGAAGACCACGCCGTCGCCCACGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR GCA 90 bp ACGCTTTGTCCGTGGGCGACGGCGTGGTCTTCTCCGACGGCGAGGTaGTCGCTGACGCTCCCGATTCCTCCTTGCTGCCCTTGCGCGACT +
Preference number: 1 (lower is better)
Translates to: TLCPWATAWSSPTAR*SLTLPIPPCCPCAT
Trigger: AGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCACCTCGCCGTCGGAGAAGACCACGCCGTCGCCCACGGACAAAGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR TCA 90 bp GAGGCTCAGCTTTACGTCCGTGCTGTACTTCCAGGCATCGCCTCTTaGCCCGCTCCCCTTGTCGGCCGGCGACGCTCCCGACGCTTTGTC +
Preference number: 1 (lower is better)
Translates to: EAQLYVRAVLPGIAS*PAPLVGRRRSRRFV
Trigger: GACAAAGCGTCGGGAGCGTCGCCGGCCGACAAGGGGAGCGGGTCAAGAGGCGATGCCTGGAAGTACAGCACGGACGTAAAGCTGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CCA 90 bp CCTTGTTGCGCTCAGCGCTGTCGCCGTTTTTGCCGTTGGCAGAGTTaGCACGACCCATCTTACCGTGCACCAGGCCGCCTAGCCCGCCCA +
Preference number: 1 (lower is better)
Translates to: PCCAQRCRRFCRWQS*HDPSYRAPGRLARP
Trigger: TGGGCGGGCTAGGCGGCCTGGTGCACGGTAAGATGGGTCGTGCCAACTCTGCCAACGGCAAAAACGGCGACAGCGCTGAGCGCAACAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR GCA 90 bp ACGGCGAGGTGCTCGCTGACGCTCCCGATTCCTCCTTGCTGCCCTTaGGCGACTTGGACTTTTTCTCCTTGTTGCGCTCAGCGCTGTCGC +
Preference number: 1 (lower is better)
Translates to: TARCSLTLPIPPCCP*ATWTFSPCCAQRCR
Trigger: GCGACAGCGCTGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCACCTCGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR GCA 90 bp TCTCCGACGGCGAGGTGCTCGCTGACGCTCCCGATTCCTCCTTGCTaGCCTTGCGCGACTTGGACTTTTTCTCCTTGTTGCGCTCAGCGC +
Preference number: 1 (lower is better)
Translates to: SPTARCSLTLPIPPC*PCATWTFSPCCAQR
Trigger: GCGCTGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCACCTCGCCGTCGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR GCA 90 bp TGGCTGGTGAGCAGCAGGCCGGCGAAGATGAATTTGCGCTCGCCTTaGATGGCGGCGCGCAGGATGTTGAGGCTCAGCTTTACGTCCGTG +
Preference number: 1 (lower is better)
Translates to: WLVSSRPAKMNLRSP*MAARRMLRLSFTSV
Trigger: CACGGACGTAAAGCTGAGCCTCAACATCCTGCGCGCCGCCATGCAAGGCGAGCGCAAATTCATCTTCGCCGGCCTGCTGCTCACCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR GCA 90 bp TCTTCTCCGACGGCGAGGTGCTCGCTGACGCTCCCGATTCCTCCTTaGTGCCCTTGCGCGACTTGGACTTTTTCTCCTTGTTGCGCTCAG +
Preference number: 1 (lower is better)
Translates to: SSPTARCSLTLPIPP*CPCATWTFSPCCAQ
Trigger: CTGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCACCTCGCCGTCGGAGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CCA 90 bp TGCTCGCTGACGCTCCCGATTCCTCCTTGCTGCCCTTGCGCGACTTaGACTTTTTCTCCTTGTTGCGCTCAGCGCTGTCGCCGTTTTTGC +
Preference number: 1 (lower is better)
Translates to: CSLTLPIPPCCPCAT*TFSPCCAQRCRRFC
Trigger: GCAAAAACGGCGACAGCGCTGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CCA 90 bp ACTTTTTCTCCTTGTTGCGCTCAGCGCTGTCGCCGTTTTTGCCGTTaGCAGAGTTGGCACGACCCATCTTACCGTGCACCAGGCCGCCTA +
Preference number: 1 (lower is better)
Translates to: TFSPCCAQRCRRFCR*QSWHDPSYRAPGRL
Trigger: TAGGCGGCCTGGTGCACGGTAAGATGGGTCGTGCCAACTCTGCCAACGGCAAAAACGGCGACAGCGCTGAGCGCAACAAGGAGAAAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR TCA 90 bp TACCTGAGTGGCATCAGTGTAGGTTCAGGCACCATTAGGAACGTTTaGCCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTT +
Preference number: 1 (lower is better)
Translates to: YLSGISVGSGTIRNV*PNTYTALTEEAPAL
Trigger: AAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGTCAAACGTTCCTAATGGTGCCTGAACCTACACTGATGCCACTCAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
3UTR GCA 90 bp ACTTGGACTTTTTCTCCTTGTTGCGCTCAGCGCTGTCGCCGTTTTTaGCGTTGGCAGAGTTGGCACGACCCATCTTACCGTGCACCAGGC +
Preference number: 1 (lower is better)
Translates to: TWTFSPCCAQRCRRF*RWQSWHDPSYRAPG
Trigger: GCCTGGTGCACGGTAAGATGGGTCGTGCCAACTCTGCCAACGGCAAAAACGGCGACAGCGCTGAGCGCAACAAGGAGAAAAAGTCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR GCA 90 bp ATTCCTCCTTGCTGCCCTTGCGCGACTTGGACTTTTTCTCCTTGTTaGGCTCAGCGCTGTCGCCGTTTTTGCCGTTGGCAGAGTTGGCAC +
Preference number: 1 (lower is better)
Translates to: IPPCCPCATWTFSPC*AQRCRRFCRWQSWH
Trigger: GTGCCAACTCTGCCAACGGCAAAAACGGCGACAGCGCTGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 90 bp CCTCTTGACCCGCTCCCCTTGTCGGCCGGCGACGCTCCCGACGCTTaGTCCGTGGGCGACGGCGTGGTCTTCTCCGACGGCGAGGTGCTC +
Preference number: 2 (lower is better)
Translates to: PLDPLPLSAGDAPDA*SVGDGVVFSDGEVL
Trigger: GAGCACCTCGCCGTCGGAGAAGACCACGCCGTCGCCCACGGACAAAGCGTCGGGAGCGTCGCCGGCCGACAAGGGGAGCGGGTCAAGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR-3UTR GCA 90 bp CGGCGACGCTCCCGACGCTTTGTCCGTGGGCGACGGCGTGGTCTTCTCCGACGGCGACCCATCTTACCGTaGACCAGGCCGCCTAGCCCG +
Preference number: 2 (lower is better)
Translates to: RRRSRRFVRGRRRGLLRRRPILP*TRPPSP
Trigger: CGGGCTAGGCGGCCTGGTGCACGGTAAGATGGGTCG...CCGTCGGAGAAGACCACGCCGTCGCCCACGGACAAAGCGTCGGGAGCGTCGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 90 bp ACGTCCGTGCTGTACTTCCAGGCATCGCCTCTTGACCCGCTCCCCTaGTCGGCCGGCGACGCTCCCGACGCTTTGTCCGTGGGCGACGGC +
Preference number: 2 (lower is better)
Translates to: TSVLYFQASPLDPLP*SAGDAPDALSVGDG
Trigger: GCCGTCGCCCACGGACAAAGCGTCGGGAGCGTCGCCGGCCGACAAGGGGAGCGGGTCAAGAGGCGATGCCTGGAAGTACAGCACGGACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR-3UTR GCA 90 bp GGCGACGCTCCCGACGCTTTGTCCGTGGGCGACGGCGTGGTCTTCTCCGACGGCCCGATTCCTCCTTGCTaGCCTTGCGCGACTTGGACT +
Preference number: 2 (lower is better)
Translates to: GDAPDALSVGDGVVFSDGPIPPC*PCATWT
Trigger: AGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGG...GCCGTCGGAGAAGACCACGCCGTCGCCCACGGACAAAGCGTCGGGAGCGTCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 90 bp TCCTTGTTGCGCTCAGCGCTGTCGCCGTTTTTGCCGTTGGCAGAGTaGGCACGACCCATCTTACCGTGCACCAGGCCGCCTAGCCCGCCC +
Preference number: 2 (lower is better)
Translates to: SLLRSALSPFLPLAE*ARPILPCTRPPSPP
Trigger: GGGCGGGCTAGGCGGCCTGGTGCACGGTAAGATGGGTCGTGCCAACTCTGCCAACGGCAAAAACGGCGACAGCGCTGAGCGCAACAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 90 bp AACTGGTGCCGGTGGCTGGTGAGCAGCAGGCCGGCGAAGATGAATTaGCGCTCGCCTTGCATGGCGGCGCGCAGGATGTTGAGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: NWCRWLVSSRPAKMN*RSPCMAARRMLRLS
Trigger: GCTGAGCCTCAACATCCTGCGCGCCGCCATGCAAGGCGAGCGCAAATTCATCTTCGCCGGCCTGCTGCTCACCAGCCACCGGCACCAGTT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR-3UTR CCA 90 bp GATGAATTTGCGCTCGCCTTGCATGGCGGCGCGCAGGATGTTGAGGCTCAGCTTCCGTGGGCGACGGCGTaGTCTTCTCCGACGGCGAGG +
Preference number: 2 (lower is better)
Translates to: DEFALALHGGAQDVEAQLPWATA*SSPTAR
Trigger: CCTCGCCGTCGGAGAAGACCACGCCGTCGCCCACGG...AAGCTGAGCCTCAACATCCTGCGCGCCGCCATGCAAGGCGAGCGCAAATTCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR-3UTR GCA 90 bp CGCTCGCCTTGCATGGCGGCGCGCAGGATGTTGAGGCTCAGCTTTACGTCCGTGCTCCCGATTCCTCCTTaGTGCCCTTGCGCGACTTGG +
Preference number: 2 (lower is better)
Translates to: RSPCMAARRMLRLSFTSVLPIPP*CPCATW
Trigger: CCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAG...CACGGACGTAAAGCTGAGCCTCAACATCCTGCGCGCCGCCATGCAAGGCGAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 90 bp GACGGCGAGGTGCTCGCTGACGCTCCCGATTCCTCCTTGCTGCCCTaGCGCGACTTGGACTTTTTCTCCTTGTTGCGCTCAGCGCTGTCG +
Preference number: 2 (lower is better)
Translates to: DGEVLADAPDSSLLP*RDLDFFSLLRSALS
Trigger: CGACAGCGCTGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCACCTCGCCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 90 bp GTGGCTGGTGAGCAGCAGGCCGGCGAAGATGAATTTGCGCTCGCCTaGCATGGCGGCGCGCAGGATGTTGAGGCTCAGCTTTACGTCCGT +
Preference number: 2 (lower is better)
Translates to: VAGEQQAGEDEFALA*HGGAQDVEAQLYVR
Trigger: ACGGACGTAAAGCTGAGCCTCAACATCCTGCGCGCCGCCATGCAAGGCGAGCGCAAATTCATCTTCGCCGGCCTGCTGCTCACCAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 90 bp GTCTTCTCCGACGGCGAGGTGCTCGCTGACGCTCCCGATTCCTCCTaGCTGCCCTTGCGCGACTTGGACTTTTTCTCCTTGTTGCGCTCA +
Preference number: 2 (lower is better)
Translates to: VFSDGEVLADAPDSS*LPLRDLDFFSLLRS
Trigger: TGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCACCTCGCCGTCGGAGAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 90 bp GACTTTTTCTCCTTGTTGCGCTCAGCGCTGTCGCCGTTTTTGCCGTaGGCAGAGTTGGCACGACCCATCTTACCGTGCACCAGGCCGCCT +
Preference number: 2 (lower is better)
Translates to: DFFSLLRSALSPFLP*AELARPILPCTRPP
Trigger: AGGCGGCCTGGTGCACGGTAAGATGGGTCGTGCCAACTCTGCCAACGGCAAAAACGGCGACAGCGCTGAGCGCAACAAGGAGAAAAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 90 bp GTGCTCGCTGACGCTCCCGATTCCTCCTTGCTGCCCTTGCGCGACTaGGACTTTTTCTCCTTGTTGCGCTCAGCGCTGTCGCCGTTTTTG +
Preference number: 2 (lower is better)
Translates to: VLADAPDSSLLPLRD*DFFSLLRSALSPFL
Trigger: CAAAAACGGCGACAGCGCTGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR-3UTR GCA 90 bp TGGCTGGTGAGCAGCAGGCCGGCGAAGATGAATTTGCGCTCGCCTTGCATGGCGCCTCCTTGCTGCCCTTaGGCGACTTGGACTTTTTCT +
Preference number: 2 (lower is better)
Translates to: WLVSSRPAKMNLRSPCMAPPCCP*ATWTFS
Trigger: AGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGG...CGCCATGCAAGGCGAGCGCAAATTCATCTTCGCCGGCCTGCTGCTCACCAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR-3UTR CCA 90 bp CCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGAAAAAGACCCACAGGATaGAAAAAGCAGTCCTGGACG +
Preference number: 2 (lower is better)
Translates to: PNTYTALTEEAPALRLTRKRPTG*KKQSWT
Trigger: CGTCCAGGACTGCTTTTTCCATCCTGTGGGTCTTTT...TCTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
3UTR-3UTR CCA 90 bp TTACGTCCGTGCTGTACTTCCAGGCATCGCCTCTTGACCCGCTCCCCTTGTCGGTGCCGTTGGCAGAGTTaGCACGACCCATCTTACCGT +
Preference number: 2 (lower is better)
Translates to: LRPCCTSRHRLLTRSPCRCRWQS*HDPSYR
Trigger: ACGGTAAGATGGGTCGTGCCAACTCTGCCAACGGCA...CCGACAAGGGGAGCGGGTCAAGAGGCGATGCCTGGAAGTACAGCACGGACGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 90 bp CCCGATTCCTCCTTGCTGCCCTTGCGCGACTTGGACTTTTTCTCCTaGTTGCGCTCAGCGCTGTCGCCGTTTTTGCCGTTGGCAGAGTTG +
Preference number: 2 (lower is better)
Translates to: PDSSLLPLRDLDFFS*LRSALSPFLPLAEL
Trigger: CAACTCTGCCAACGGCAAAAACGGCGACAGCGCTGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 90 bp GACTTGGACTTTTTCTCCTTGTTGCGCTCAGCGCTGTCGCCGTTTTaGCCGTTGGCAGAGTTGGCACGACCCATCTTACCGTGCACCAGG +
Preference number: 2 (lower is better)
Translates to: DLDFFSLLRSALSPF*PLAELARPILPCTR
Trigger: CCTGGTGCACGGTAAGATGGGTCGTGCCAACTCTGCCAACGGCAAAAACGGCGACAGCGCTGAGCGCAACAAGGAGAAAAAGTCCAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 90 bp GATTCCTCCTTGCTGCCCTTGCGCGACTTGGACTTTTTCTCCTTGTaGCGCTCAGCGCTGTCGCCGTTTTTGCCGTTGGCAGAGTTGGCA +
Preference number: 2 (lower is better)
Translates to: DSSLLPLRDLDFFSL*RSALSPFLPLAELA
Trigger: TGCCAACTCTGCCAACGGCAAAAACGGCGACAGCGCTGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR-3UTR CCA 90 bp CAGGATGTTGAGGCTCAGCTTTACGTCCGTGCTGTACTTCCAGGCATCGCCTCTTGCCCTTGCGCGACTTaGACTTTTTCTCCTTGTTGC +
Preference number: 2 (lower is better)
Translates to: QDVEAQLYVRAVLPGIASCPCAT*TFSPCC
Trigger: GCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCA...AGAGGCGATGCCTGGAAGTACAGCACGGACGTAAAGCTGAGCCTCAACATCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR-3UTR TCA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATACCATTAGGAACGTTTaGCCAAACACGTACACGGCA +
Preference number: 2 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHTIRNV*PNTYTA
Trigger: TGCCGTGTACGTGTTTGGTCAAACGTTCCTAATGGT...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
3UTR CAA 90 bp CTTTATTTCTCGTATAGAGGAACAAAAATACTCTTGCAATGGCTATaGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCACACCCA +
Preference number: 2 (lower is better)
Translates to: LYFSYRGTKILLQWL*SFHRYEADARLAHP
Trigger: TGGGTGTGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAAGAGTATTTTTGTTCCTCTATACGAGAAATAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
3UTR CCA 72 bp CCTTGTCGGCCGGCGACGCTCCCGACGCTTTGTCCGTaGGCGACGGCGTGGTCTTCTCCGACGGCGAGGTGC +
Preference number: 3 (lower is better)
Translates to: PCRPATLPTLCP*ATAWSSPTARC
Trigger: GCACCTCGCCGTCGGAGAAGACCACGCCGTCGCCCACGGACAAAGCGTCGGGAGCGTCGCCGGCCGACAAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CCA 72 bp GCGACGCTCCCGACGCTTTGTCCGTGGGCGACGGCGTaGTCTTCTCCGACGGCGAGGTGCTCGCTGACGCTC +
Preference number: 3 (lower is better)
Translates to: ATLPTLCPWATA*SSPTARCSLTL
Trigger: GAGCGTCAGCGAGCACCTCGCCGTCGGAGAAGACCACGCCGTCGCCCACGGACAAAGCGTCGGGAGCGTCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR GCA 72 bp CCGTGGGCGACGGCGTGGTCTTCTCCGACGGCGAGGTaGTCGCTGACGCTCCCGATTCCTCCTTGCTGCCCT +
Preference number: 3 (lower is better)
Translates to: PWATAWSSPTAR*SLTLPIPPCCP
Trigger: AGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCACCTCGCCGTCGGAGAAGACCACGCCGTCGCCCACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR TCA 72 bp CGACGGCGTGGTCTTCTCCGACGGCGAGGTGCTCGCTaGCGCTCCCGATTCCTCCTTGCTGCCCTTGCGCGA +
Preference number: 3 (lower is better)
Translates to: RRRGLLRRRGAR*RSRFLLAALAR
Trigger: TCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCACCTCGCCGTCGGAGAAGACCACGCCGTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR TCA 72 bp CTTTACGTCCGTGCTGTACTTCCAGGCATCGCCTCTTaGCCCGCTCCCCTTGTCGGCCGGCGACGCTCCCGA +
Preference number: 3 (lower is better)
Translates to: LYVRAVLPGIAS*PAPLVGRRRSR
Trigger: TCGGGAGCGTCGCCGGCCGACAAGGGGAGCGGGTCAAGAGGCGATGCCTGGAAGTACAGCACGGACGTAAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR-3UTR CAA 90 bp CGACGCTTTGTCCGTGGGCGACGGCGTGGTCTTCTCCGACGGCGAGGTGCTCGCCTGCCCTTGCGCGACTaGGACTTTTTCTCCTTGTTG +
Preference number: 3 (lower is better)
Translates to: RRFVRGRRRGLLRRRGARLPLRD*DFFSLL
Trigger: CAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAG...GCGAGCACCTCGCCGTCGGAGAAGACCACGCCGTCGCCCACGGACAAAGCGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR-3UTR CAA 90 bp CAGGATGTTGAGGCTCAGCTTTACGTCCGTGCTGTACTTCCAGGCATCGCCTCTGACGCTCCCGACGCTTaGTCCGTGGGCGACGGCGTG +
Preference number: 3 (lower is better)
Translates to: QDVEAQLYVRAVLPGIASDAPDA*SVGDGV
Trigger: CACGCCGTCGCCCACGGACAAAGCGTCGGGAGCGTC...AGAGGCGATGCCTGGAAGTACAGCACGGACGTAAAGCTGAGCCTCAACATCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CCA 72 bp GCTCAGCGCTGTCGCCGTTTTTGCCGTTGGCAGAGTTaGCACGACCCATCTTACCGTGCACCAGGCCGCCTA +
Preference number: 3 (lower is better)
Translates to: AQRCRRFCRWQS*HDPSYRAPGRL
Trigger: TAGGCGGCCTGGTGCACGGTAAGATGGGTCGTGCCAACTCTGCCAACGGCAAAAACGGCGACAGCGCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR GCA 72 bp AGCAGCAGGCCGGCGAAGATGAATTTGCGCTCGCCTTaGATGGCGGCGCGCAGGATGTTGAGGCTCAGCTTT +
Preference number: 3 (lower is better)
Translates to: SSRPAKMNLRSP*MAARRMLRLSF
Trigger: AAAGCTGAGCCTCAACATCCTGCGCGCCGCCATGCAAGGCGAGCGCAAATTCATCTTCGCCGGCCTGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR GCA 72 bp GCGAGGTGCTCGCTGACGCTCCCGATTCCTCCTTGCTaGCCTTGCGCGACTTGGACTTTTTCTCCTTGTTGC +
Preference number: 3 (lower is better)
Translates to: ARCSLTLPIPPC*PCATWTFSPCC
Trigger: GCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCACCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR GCA 72 bp ACGGCGAGGTGCTCGCTGACGCTCCCGATTCCTCCTTaGTGCCCTTGCGCGACTTGGACTTTTTCTCCTTGT +
Preference number: 3 (lower is better)
Translates to: TARCSLTLPIPP*CPCATWTFSPC
Trigger: ACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCACCTCGCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CCA 72 bp ACGCTCCCGATTCCTCCTTGCTGCCCTTGCGCGACTTaGACTTTTTCTCCTTGTTGCGCTCAGCGCTGTCGC +
Preference number: 3 (lower is better)
Translates to: TLPIPPCCPCAT*TFSPCCAQRCR
Trigger: GCGACAGCGCTGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR GCA 72 bp TGCTGCCCTTGCGCGACTTGGACTTTTTCTCCTTGTTaGGCTCAGCGCTGTCGCCGTTTTTGCCGTTGGCAG +
Preference number: 3 (lower is better)
Translates to: CCPCATWTFSPC*AQRCRRFCRWQ
Trigger: CTGCCAACGGCAAAAACGGCGACAGCGCTGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR GCA 72 bp TGCTCGCTGACGCTCCCGATTCCTCCTTGCTGCCCTTaGGCGACTTGGACTTTTTCTCCTTGTTGCGCTCAG +
Preference number: 3 (lower is better)
Translates to: CSLTLPIPPCCP*ATWTFSPCCAQ
Trigger: CTGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR-3UTR CAA 90 bp CAGGATGTTGAGGCTCAGCTTTACGTCCGTGCTGTACTTCCAGGCATCGCCTCTTCCTCCTTGCTGCCCTaGCGCGACTTGGACTTTTTC +
Preference number: 3 (lower is better)
Translates to: QDVEAQLYVRAVLPGIASSSLLP*RDLDFF
Trigger: GAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGA...AGAGGCGATGCCTGGAAGTACAGCACGGACGTAAAGCTGAGCCTCAACATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR TCA 72 bp GGCATCAGTGTAGGTTCAGGCACCATTAGGAACGTTTaGCCAAACACGTACACGGCACTGACCGAGGAGGCG +
Preference number: 3 (lower is better)
Translates to: GISVGSGTIRNV*PNTYTALTEEA
Trigger: CGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGTCAAACGTTCCTAATGGTGCCTGAACCTACACTGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
3UTR CAA 72 bp CCGCTCCCCTTGTCGGCCGGCGACGCTCCCGACGCTTaGTCCGTGGGCGACGGCGTGGTCTTCTCCGACGGC +
Preference number: 4 (lower is better)
Translates to: PLPLSAGDAPDA*SVGDGVVFSDG
Trigger: GCCGTCGGAGAAGACCACGCCGTCGCCCACGGACAAAGCGTCGGGAGCGTCGCCGGCCGACAAGGGGAGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR TCA 90 bp CGTTTGACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTCCGCCTGCACGTGGATaGCGCTCTGGCGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: RLTKHVHGTDRGGAGPSAPPARG*RSGARA
Trigger: CGCCCGCGCGCCAGAGCGTCATCCACGTGCAGGCGG...AGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGTCAAACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp ACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGCCGTGGGCGACGGCGTaGTCTTCTCCGACGGCGAGG +
Preference number: 4 (lower is better)
Translates to: TKHVHGTDRGGAGPSADQPWATA*SSPTAR
Trigger: CCTCGCCGTCGGAGAAGACCACGCCGTCGCCCACGG...CTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR TCA 90 bp CGCCTCTTGACCCGCTCCCCTTGTCGGCCGGCGACGCTCCCGACGCTTTGTCCGTGCCCAGCGTCTTGCTaGAGCTGCCCAGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RLLTRSPCRPATLPTLCPCPASC*SCPACW
Trigger: CCAACAAGCTGGGCAGCTTCAGCAAGACGCTGGGCA...CGGACAAAGCGTCGGGAGCGTCGCCGGCCGACAAGGGGAGCGGGTCAAGAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR GCA 90 bp ACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGCACAGCGAGCGGTTCTaGTGCGGGTACGTCGCGCAC +
Preference number: 4 (lower is better)
Translates to: TKHVHGTDRGGAGPSADQHSERF*CGYVAH
Trigger: GTGCGCGACGTACCCGCAGCAGAACCGCTCGCTGTG...CTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
3UTR CAA 72 bp CTGTACTTCCAGGCATCGCCTCTTGACCCGCTCCCCTaGTCGGCCGGCGACGCTCCCGACGCTTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: LYFQASPLDPLP*SAGDAPDALSV
Trigger: CACGGACAAAGCGTCGGGAGCGTCGCCGGCCGACAAGGGGAGCGGGTCAAGAGGCGATGCCTGGAAGTACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 72 bp GCTTTACGTCCGTGCTGTACTTCCAGGCATCGCCTCTaGACCCGCTCCCCTTGTCGGCCGGCGACGCTCCCG +
Preference number: 4 (lower is better)
Translates to: ALRPCCTSRHRL*TRSPCRPATLP
Trigger: CGGGAGCGTCGCCGGCCGACAAGGGGAGCGGGTCAAGAGGCGATGCCTGGAAGTACAGCACGGACGTAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR CCA 90 bp ACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGATGGCTGAGCTGGCATaGGAGATCCCCCGGGACAGG +
Preference number: 4 (lower is better)
Translates to: TKHVHGTDRGGAGPSADQMAELA*EIPRDR
Trigger: CCTGTCCCGGGGGATCTCCCATGCCAGCTCAGCCAT...CTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp CCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGACCGACGCTTTGTCCGTaGGCGACGGCGTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PNTYTALTEEAPALRLTRPTLCP*ATAWSS
Trigger: AGAAGACCACGCCGTCGCCCACGGACAAAGCGTCGG...TCTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
3UTR CAA 72 bp CGGTGGCTGGTGAGCAGCAGGCCGGCGAAGATGAATTaGCGCTCGCCTTGCATGGCGGCGCGCAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: RWLVSSRPAKMN*RSPCMAARRML
Trigger: CAACATCCTGCGCGCCGCCATGCAAGGCGAGCGCAAATTCATCTTCGCCGGCCTGCTGCTCACCAGCCACCG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR CCA 90 bp CCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGAAGCGCTCCTGCGCGCTaGTCAGGTAGTAGCCGATCA +
Preference number: 4 (lower is better)
Translates to: PNTYTALTEEAPALRLTRSAPAR*SGSSRS
Trigger: TGATCGGCTACTACCTGACCAGCGCGCAGGAGCGCT...TCTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp CCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGAGGCAGGTTGGCTGTGTaGACCTGTCGCAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: PNTYTALTEEAPALRLTRGRLAV*TCRSCS
Trigger: TGAGCAACTGCGACAGGTGCACACAGCCAACCTGCC...TCTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR TCA 90 bp CGTTTGACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTCACTGCCATTCTTGCTaGAGTGTGTGCGAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: RLTKHVHGTDRGGAGPSAHCHSC*SVCEAR
Trigger: GCGAGCCTCGCACACACTTCAGCAAGAATGGCAGTG...AGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGTCAAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp TTGCATGGCGGCGCGCAGGATGTTGAGGCTCAGCTTTACGTCCGTGCTGTACTTAGCTGCCCAGCTTGTTaGCCACGGAGTCCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: LHGGAQDVEAQLYVRAVLSCPAC*PRSPRA
Trigger: CGCGCGCGGACTCCGTGGCCAACAAGCTGGGCAGCT...AAGTACAGCACGGACGTAAAGCTGAGCCTCAACATCCTGCGCGCCGCCATGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 72 bp GAGCAGCAGGCCGGCGAAGATGAATTTGCGCTCGCCTaGCATGGCGGCGCGCAGGATGTTGAGGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: EQQAGEDEFALA*HGGAQDVEAQL
Trigger: AAGCTGAGCCTCAACATCCTGCGCGCCGCCATGCAAGGCGAGCGCAAATTCATCTTCGCCGGCCTGCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR GCA 90 bp ACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGTGGGATGGGTGCAAATaGTTCTCCACCAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: TKHVHGTDRGGAGPSADQWDGCK*FSTRVS
Trigger: AGAGACTCTGGTGGAGAAGCATTTGCACCCATCCCA...CTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp CCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGATCCGAATGGGATGGGTaGAAATGCTTCTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: PNTYTALTEEAPALRLTRSEWDG*KCFSTR
Trigger: TCTGGTGGAGAAGCATTTGCACCCATCCCATTCGGA...TCTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp CCTCTTGACCCGCTCCCCTTGTCGGCCGGCGACGCTCCCGACGCTTTGTCCGTGTCTTGTCCTTGTCCTTaGGCTGTTTCTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PLDPLPLSAGDAPDALSVSCPCP*AVSPSL
Trigger: AAGAGAAGGAGAAACAGCGCAAGGACAAGGACAAGA...CACGGACAAAGCGTCGGGAGCGTCGCCGGCCGACAAGGGGAGCGGGTCAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR GCA 90 bp CTCGCCTTGCATGGCGGCGCGCAGGATGTTGAGGCTCAGCTTTACGTCCGTGCTTGGAGACTCTGGCTGTaGAAGGGGAGCTTGGCTAAC +
Preference number: 4 (lower is better)
Translates to: LALHGGAQDVEAQLYVRAWRLWL*KGSLAN
Trigger: GTTAGCCAAGCTCCCCTTGCACAGCCAGAGTCTCCA...AGCACGGACGTAAAGCTGAGCCTCAACATCCTGCGCGCCGCCATGCAAGGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR CCA 90 bp ACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGGATGGGCATCTCCAGTaGGAACTGCTCATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: TKHVHGTDRGGAGPSADQDGHLQ*ELLIVA
Trigger: TGCAACAATGAGCAGTTCCCACTGGAGATGCCCATC...CTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp CCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGATGCCCTTGCGCGACTTaGACTTTTTCTCCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: PNTYTALTEEAPALRLTRCPCAT*TFSPCC
Trigger: GCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCA...TCTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp CTCTTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCAGCCGCCGCCTGCACGTaGATGACGCTCTGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: LLQWLLSFHRYEADARLAAAACT*MTLWRA
Trigger: CGCGCGCCAGAGCGTCATCCACGTGCAGGCGGCGGC...TGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp TGCTCGCTGACGCTCCCGATTCCTCCTTGCTGCCCTTGCGCGACTTGGACTTTTGGCCGTTGGAGACTCTaGCTGTGCAAGGGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: CSLTLPIPPCCPCATWTFGRWRL*LCKGSL
Trigger: CAAGCTCCCCTTGCACAGCCAGAGTCTCCAACGGCC...AAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 72 bp GACGCTCCCGATTCCTCCTTGCTGCCCTTGCGCGACTaGGACTTTTTCTCCTTGTTGCGCTCAGCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: DAPDSSLLPLRD*DFFSLLRSALS
Trigger: CGACAGCGCTGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR GCA 90 bp TTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCACACTCCCGGGCCGCCGCCTaGACGTGGATGACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LQWLLSFHRYEADARLAHSRAAA*TWMTLW
Trigger: CCAGAGCGTCATCCACGTGCAGGCGGCGGCCCGGGA...GTGTGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR TCA 90 bp TTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCACACCCAGGCATCGCCTCTTaGCCCGCTCCCCTTGTCGGC +
Preference number: 4 (lower is better)
Translates to: LQWLLSFHRYEADARLAHPGIAS*PAPLVG
Trigger: GCCGACAAGGGGAGCGGGTCAAGAGGCGATGCCTGG...GTGTGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp ACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGTCTTGTCCTTGTCCTTaGGCTGTTTCTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TKHVHGTDRGGAGPSADQSCPCP*AVSPSL
Trigger: AAGAGAAGGAGAAACAGCGCAAGGACAAGGACAAGA...CTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp CGTTTGACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGCTGGAATGTATAGATaGGCATCTCCAGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: RLTKHVHGTDRGGAGPSAAGMYR*ASPVGT
Trigger: AGTTCCCACTGGAGATGCCCATCTATACATTCCAGC...AGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGTCAAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp CTCTTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCAAGCTGCCCAGCTTGTTaGCCACGGAGTCCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: LLQWLLSFHRYEADARLASCPAC*PRSPRA
Trigger: CGCGCGCGGACTCCGTGGCCAACAAGCTGGGCAGCT...TGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
3UTR CAA 72 bp GTGCTCGCTGACGCTCCCGATTCCTCCTTGCTGCCCTaGCGCGACTTGGACTTTTTCTCCTTGTTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: VLADAPDSSLLP*RDLDFFSLLRS
Trigger: TGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR TCA 90 bp CTCTTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCAGGCCAGAACCAGGGGTaGGCAGTGGCACCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: LLQWLLSFHRYEADARLAGQNQG*AVAPVG
Trigger: CCCAACAGGTGCCACTGCTCACCCCTGGTTCTGGCC...TGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR TCA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATGGTGCCGGTGGCTGGTaGGCAGCAGGCCGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHGAGGW*AAGRRR
Trigger: TCTTCGCCGGCCTGCTGCTCACCAGCCACCGGCACC...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp ACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGATCTCCAGTGGGAACTaGTCATTGTTGCACTCATTT +
Preference number: 4 (lower is better)
Translates to: TKHVHGTDRGGAGPSADQISSGN*SLLHSF
Trigger: AAATGAGTGCAACAATGAGCAGTTCCCACTGGAGAT...CTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp TTTACGTCCGTGCTGTACTTCCAGGCATCGCCTCTTGACCCGCTCCCCTTGTCGTGCTGTTGGAATTGCTaGACACAGAATCGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: FTSVLYFQASPLDPLPLSCCWNC*TQNRGP
Trigger: CGGACCGCGATTCTGTGTGCAGCAATTCCAACAGCA...CGACAAGGGGAGCGGGTCAAGAGGCGATGCCTGGAAGTACAGCACGGACGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR GCA 90 bp GCTGGTGAGCAGCAGGCCGGCGAAGATGAATTTGCGCTCGCCTTGCATGGCGGCTATTGCTGTTGGAATTaGTGCACACAGAATCGCGGT +
Preference number: 4 (lower is better)
Translates to: AGEQQAGEDEFALALHGGYCCWN*CTQNRG
Trigger: ACCGCGATTCTGTGTGCAGCAATTCCAACAGCAATA...GCCGCCATGCAAGGCGAGCGCAAATTCATCTTCGCCGGCCTGCTGCTCACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR GCA 90 bp CTCTTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCACGACCCATCTTACCGTaGACCAGGCCGCCTAGCCCG +
Preference number: 4 (lower is better)
Translates to: LLQWLLSFHRYEADARLARPILP*TRPPSP
Trigger: CGGGCTAGGCGGCCTGGTGCACGGTAAGATGGGTCG...TGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp CCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCAGCGAGCGGTTCTGCTaGGGGTACGTCGCGCACGGC +
Preference number: 4 (lower is better)
Translates to: PTSNSMTCFLSVYYLSGISERFC*GYVAHG
Trigger: GCCGTGCGCGACGTACCCGCAGCAGAACCGCTCGCT...GATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp TTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCACACGGCCGTTGGAGACTCTaGCTGTGCAAGGGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LQWLLSFHRYEADARLAHGRWRL*LCKGSP
Trigger: CGGGCTCCCCTTGCACAGCCAGAGTCTCCAACGGCC...GTGTGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp CACACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCAGCGCGCTGCGCGCTaGGCTGTAGCTCTGCGACCA +
Preference number: 4 (lower is better)
Translates to: HTHFQQYDLFPIRLLPEWQRAAR*AVALRP
Trigger: TGGTCGCAGAGCTACAGCCCAGCGCGCAGCGCGCTG...CCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
3UTR CAA 72 bp TTGCTGCCCTTGCGCGACTTGGACTTTTTCTCCTTGTaGCGCTCAGCGCTGTCGCCGTTTTTGCCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LLPLRDLDFFSL*RSALSPFLPLA
Trigger: TGCCAACGGCAAAAACGGCGACAGCGCTGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
3UTR CAA 72 bp TCCTTGCTGCCCTTGCGCGACTTGGACTTTTTCTCCTaGTTGCGCTCAGCGCTGTCGCCGTTTTTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: SLLPLRDLDFFS*LRSALSPFLPL
Trigger: CAACGGCAAAAACGGCGACAGCGCTGAGCGCAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR GCA 90 bp CCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGACATTCTTGCCATTATTaGTGTTGGAATTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: PNTYTALTEEAPALRLTRHSCHY*CWNCCT
Trigger: TGTGCAGCAATTCCAACAGCAATAATGGCAAGAATG...TCTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR TCA 90 bp TTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCACACGCAGGCCGGCGAAGATaGATTTGCGCTCGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LQWLLSFHRYEADARLAHAGRRR*ICARLA
Trigger: TGCAAGGCGAGCGCAAATTCATCTTCGCCGGCCTGC...GTGTGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR TCA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATGGGACTCCACTGTATTaGCGGTGCGCAGCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHGTPLY*RCAARC
Trigger: GCAGCGCGCTGCGCACCGTCAATACAGTGGAGTCCC...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp TTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCACACTGGGCAATATCGTCCTaGCTCTGCAGGCAAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LQWLLSFHRYEADARLAHWAISS*LCRQGR
Trigger: GCGGCCTTGCCTGCAGAGGCAGGACGATATTGCCCA...GTGTGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp ACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGTGTCCTTACCATTCTTaGCATTATTGCTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: TKHVHGTDRGGAGPSADQCPYHS*HYCCWN
Trigger: ATTCCAACAGCAATAATGGCAAGAATGGTAAGGACA...CTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp TTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCACACCTCCCGATTCCTCCTTaGTGCCCTTGCGCGACTTGG +
Preference number: 4 (lower is better)
Translates to: LQWLLSFHRYEADARLAHLPIPP*CPCATW
Trigger: CCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGGGAG...GTGTGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp CCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCAGACGATGGCTGAGCTaGCATGGGAGATCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PTSNSMTCFLSVYYLSGIRRWLS*HGRSPG
Trigger: CCCGGGGGATCTCCCATGCCAGCTCAGCCATCGTCT...GATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp TTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCACACCACTCATTTGCCACGTaGGATCGGGCCAGGGAGACG +
Preference number: 4 (lower is better)
Translates to: LQWLLSFHRYEADARLAHHSFAT*DRARET
Trigger: CGTCTCCCTGGCCCGATCCCACGTGGCAAATGAGTG...GTGTGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR TCA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCAGGGAGACGATGGCTaGGCTGGCATGGGAGATCCC +
Preference number: 4 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHQGDDG*AGMGDP
Trigger: GGGATCTCCCATGCCAGCTCAGCCATCGTCTCCCTG...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR TCA 90 bp CCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCTGCCCAGCGTCTTGCTaGAGCTGCCCAGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: PTSNSMTCFLSVYYLSGICPASC*SCPACW
Trigger: CCAACAAGCTGGGCAGCTTCAGCAAGACGCTGGGCA...GATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATACCAGGGGTGAGCAGTaGCACCTGTTGGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHTRGEQ*HLLGGT
Trigger: GGTGCCTCCCAACAGGTGCCACTGCTCACCCCTGGT...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR TCA 90 bp TCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCAGTGTACGGCGCGCAGGATGTTaGGGCTCAGCTTTACGTCCG +
Preference number: 4 (lower is better)
Translates to: SNSMTCFLSVYYLSGISVRRAGC*GSALRP
Trigger: CGGACGTAAAGCTGAGCCTCAACATCCTGCGCGCCG...TACACTGATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR TCA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCCGATCATCTCCTCGTaGAACTGGTGCCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHPIISS*NWCRWL
Trigger: CAGCCACCGGCACCAGTTTCACGAGGAGATGATCGG...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATATATCGTCCTGCCTCTaGAGGCAAGGCCGCTCCACC +
Preference number: 4 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHISSCL*RQGRST
Trigger: GGTGGAGCGGCCTTGCCTGCAGAGGCAGGACGATAT...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp CACACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGGGGTCTCGGAGGGGATaGGGATCCACGTCACATTCA +
Preference number: 4 (lower is better)
Translates to: HTHFQQYDLFPIRLLPEWGSRRG*GSTSHS
Trigger: TGAATGTGACGTGGATCCGCATCCCCTCCGAGACCC...CCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp TTACGTCCGTGCTGTACTTCCAGGCATCGCCTCTTGACCCGCTCCCCTTGTCGGCATTCTTGCCATTATTaGTGTTGGAATTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: LRPCCTSRHRLLTRSPCRHSCHY*CWNCCT
Trigger: TGTGCAGCAATTCCAACAGCAATAATGGCAAGAATG...CCGACAAGGGGAGCGGGTCAAGAGGCGATGCCTGGAAGTACAGCACGGACGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR GCA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATAATTTGCGCTCGCCTTaGATGGCGGCGCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHNLRSP*MAARRM
Trigger: CATCCTGCGCGCCGCCATGCAAGGCGAGCGCAAATT...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp CACACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGAGCCGAGGGCGGGTTTaGAAGCAGGCTAGAGACCAT +
Preference number: 4 (lower is better)
Translates to: HTHFQQYDLFPIRLLPEWSRGRV*KQARDH
Trigger: ATGGTCTCTAGCCTGCTTCCAAACCCGCCCTCGGCT...CCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp TCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCAGTGTAGGGCCAGGGAGACGATaGCTGAGCTGGCATGGGAGA +
Preference number: 4 (lower is better)
Translates to: SNSMTCFLSVYYLSGISVGPGRR*LSWHGR
Trigger: TCTCCCATGCCAGCTCAGCCATCGTCTCCCTGGCCC...TACACTGATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp CACACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGGTGTGCGAGGCTCGCTaGAGGCCAGTTTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: HTHFQQYDLFPIRLLPEWVCEAR*RPVLAA
Trigger: AGCTGCTAAAACTGGCCTCCAGCGAGCCTCGCACAC...CCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp CTCTTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCATGCCGTTGGCAGAGTTaGCACGACCCATCTTACCGT +
Preference number: 4 (lower is better)
Translates to: LLQWLLSFHRYEADARLACRWQS*HDPSYR
Trigger: ACGGTAAGATGGGTCGTGCCAACTCTGCCAACGGCA...TGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR TCA 90 bp CCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCCACACCTCCCTTCGTTaGACACATGTGGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PTSNSMTCFLSVYYLSGIHTSLR*THVAGW
Trigger: CCAACCTGCCACATGTGTTCAACGAAGGGAGGTGTG...GATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR TCA 90 bp TCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCAGTGTATACATCCTCCCCTGCTaGGGCCGTTGGAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: SNSMTCFLSVYYLSGISVYILPC*GRWRLW
Trigger: CCAGAGTCTCCAACGGCCTCAGCAGGGGAGGATGTA...TACACTGATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp TTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCACACCCTCCTTGCTGCCCTTaGGCGACTTGGACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: LQWLLSFHRYEADARLAHPPCCP*ATWTFS
Trigger: AGAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGG...GTGTGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCCGATTCCTCCTTGCTaGCCTTGCGCGACTTGGACT +
Preference number: 4 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHPIPPC*PCATWT
Trigger: AGTCCAAGTCGCGCAAGGGCAGCAAGGAGGAATCGG...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCTGCGCCGAAGCCGTTaGTGTAGGTCTGCGACTTGT +
Preference number: 4 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHLRRSR*CRSATC
Trigger: ACAAGTCGCAGACCTACAGCAACGGCTTCGGCGCAG...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp CCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCACACATGTGGCAGGTTaGCTGTGTGCACCTGTCGCA +
Preference number: 4 (lower is better)
Translates to: PTSNSMTCFLSVYYLSGITHVAG*LCAPVA
Trigger: TGCGACAGGTGCACACAGCCAACCTGCCACATGTGT...GATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp TCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCAGTGTAAGCAGTGGCACCTGTTaGGAGGCACCTCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SNSMTCFLSVYYLSGISVSSGTC*EAPPRA
Trigger: TGCCCTTGGAGGTGCCTCCCAACAGGTGCCACTGCT...TACACTGATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp TTTACGTCCGTGCTGTACTTCCAGGCATCGCCTCTTGACCCGCTCCCCTTGTCGTGCCATTATTGCTGTTaGAATTGCTGCACACAGAAT +
Preference number: 4 (lower is better)
Translates to: FTSVLYFQASPLDPLPLSCHYCC*NCCTQN
Trigger: ATTCTGTGTGCAGCAATTCCAACAGCAATAATGGCA...CGACAAGGGGAGCGGGTCAAGAGGCGATGCCTGGAAGTACAGCACGGACGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR GCA 90 bp TCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCAGTGTAAATTCTCGCTCGGCCTaGTTGGCACACCTCCCTTCG +
Preference number: 4 (lower is better)
Translates to: SNSMTCFLSVYYLSGISVNSRSA*LAHLPS
Trigger: CGAAGGGAGGTGTGCCAAGCAGGCCGAGCGAGAATT...TACACTGATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp TTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCACACGGAACTGCTCATTGTTaGACTCATTTGCCACGTGGG +
Preference number: 4 (lower is better)
Translates to: LQWLLSFHRYEADARLAHGTAHC*THLPRG
Trigger: CCCACGTGGCAAATGAGTGCAACAATGAGCAGTTCC...GTGTGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp CCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCTTCAGGCGACCTGCTTaGTCCAGAGCTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: PTSNSMTCFLSVYYLSGIFRRPA*SRATIV
Trigger: CACTATGGTAGCTCTGGAGCAAGCAGGTCGCCTGAA...GATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp CCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCTCCCTCCGAATGGGATaGGTGCAAATGCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PTSNSMTCFLSVYYLSGISLRMG*VQMLLH
Trigger: GTGGAGAAGCATTTGCACCCATCCCATTCGGAGGGA...GATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp TTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCACACGTAGATCCCTCCGAATaGGATGGGTGCAAATGCTTC +
Preference number: 4 (lower is better)
Translates to: LQWLLSFHRYEADARLAHVDPSE*DGCKCF
Trigger: GAAGCATTTGCACCCATCCCATTCGGAGGGATCTAC...GTGTGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATTCAGCTTTACGTCCGTaGTGTACTTCCAGGCATCGC +
Preference number: 4 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHSALRP*CTSRHR
Trigger: GCGATGCCTGGAAGTACAGCACGGACGTAAAGCTGA...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCACCCGTCCTCATCATaGTGTAGAGAGCTTTCCGCA +
Preference number: 4 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHHPSSS*CRELSA
Trigger: TGCGGAAAGCTCTCTACACCATGATGAGGACGGGTG...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp TCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCAGTGTATGCTGTTGGAATTGCTaGACACAGAATCGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: SNSMTCFLSVYYLSGISVCCWNC*TQNRGP
Trigger: CGGACCGCGATTCTGTGTGCAGCAATTCCAACAGCA...TACACTGATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCAGAGTCTCTTAGCATaGTGTCTGCCACCACCACAA +
Preference number: 4 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHQSLLA*CLPPPQ
Trigger: TTGTGGTGGTGGCAGACACCATGCTAAGAGACTCTG...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp AGGATGTTGAGGCTCAGCTTTACGTCCGTGCTGTACTTCCAGGCATCGCCTCTTTGTCCTTACCATTCTTaGCATTATTGCTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: RMLRLSFTSVLYFQASPLCPYHS*HYCCWN
Trigger: ATTCCAACAGCAATAATGGCAAGAATGGTAAGGACA...AAGAGGCGATGCCTGGAAGTACAGCACGGACGTAAAGCTGAGCCTCAACATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR CCA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATGGTCTCTCTGTTCCATaGACACTAGGGCTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHGLSVP*TLGLKS
Trigger: ACTTTTCAGCCCTAGTGTCCATGGAACAGAGAGACC...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR GCA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATTATTGCTGTTGGAATTaGTGCACACAGAATCGCGGT +
Preference number: 4 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHYCCWN*CTQNRG
Trigger: ACCGCGATTCTGTGTGCAGCAATTCCAACAGCAATA...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CCA 90 bp CACACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGTGCCATTATTGCTGTTaGAATTGCTGCACACAGAAT +
Preference number: 4 (lower is better)
Translates to: HTHFQQYDLFPIRLLPEWCHYCC*NCCTQN
Trigger: ATTCTGTGTGCAGCAATTCCAACAGCAATAATGGCA...CCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
3UTR CAA 72 bp TCGTATAGAGGAACAAAAATACTCTTGCAATGGCTATaGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTA +
Preference number: 4 (lower is better)
Translates to: SYRGTKILLQWL*SFHRYEADARL
Trigger: TAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAAGAGTATTTTTGTTCCTCTATACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS GCA 90 bp CCGGGGCTCGGCCGCTCCTTGAGCTTGAGCACCAGCTGCGTGGGCTaGGCGGCTGTCGGGCCCGGCGAGGCGCGCTCCGGGCCCGGCGCA +
Preference number: 5 (lower is better)
Translates to: PGLGRSLSLSTSCVG*AAVGPGEARSGPGA
Trigger: TGCGCCGGGCCCGGAGCGCGCCTCGCCGGGCCCGACAGCCGCGCAGCCCACGCAGCTGGTGCTCAAGCTCAAGGAGCGGCCGAGCCCCGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS GCA 90 bp CTCTGGCCTGCGCGCTGGCCGCTTGACCGTGGCGGTGGCCGTGGCTaGTGCGGCAGCCGCCGCGGCGTCCCGCCGCCGCTGTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: LWPARWPLDRGGGRG*CGSRRGVPPPLFLL
Trigger: GAGCAAGAACAGCGGCGGCGGGACGCCGCGGCGGCTGCCGCAGCAGCCACGGCCACCGCCACGGTCAAGCGGCCAGCGCGCAGGCCAGAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS GCA 90 bp GCTCCAGTCCCGGGGCTCGGCCGCTCCTTGAGCTTGAGCACCAGCTaGGTGGGCTGCGCGGCTGTCGGGCCCGGCGAGGCGCGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: APVPGLGRSLSLSTS*VGCAAVGPGEARSG
Trigger: CCCGGAGCGCGCCTCGCCGGGCCCGACAGCCGCGCAGCCCACGCAGCTGGTGCTCAAGCTCAAGGAGCGGCCGAGCCCCGGGACTGGAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS GCA 90 bp CGCGGCCGGCGCGTCGGCGTCGGCGAACTCCAGCCCGTCGCGGGCTaGGCCGAAGCCGTTGCTGTAGGTCTGCGACTTGTGCTCCGCGGG +
Preference number: 5 (lower is better)
Translates to: RGRRVGVGELQPVAG*AEAVAVGLRLVLRG
Trigger: CCCGCGGAGCACAAGTCGCAGACCTACAGCAACGGCTTCGGCGCAGCCCGCGACGGGCTGGAGTTCGCCGACGCCGACGCGCCGGCCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS GCA 90 bp CGGCGTCGGCGAACTCCAGCCCGTCGCGGGCTGCGCCGAAGCCGTTaGTGTAGGTCTGCGACTTGTGCTCCGCGGGTCCCGGGGCGTCCG +
Preference number: 5 (lower is better)
Translates to: RRRRTPARRGLRRSR*CRSATCAPRVPGRP
Trigger: CGGACGCCCCGGGACCCGCGGAGCACAAGTCGCAGACCTACAGCAACGGCTTCGGCGCAGCCCGCGACGGGCTGGAGTTCGCCGACGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS TCA 90 bp GTCCCGGGGCGTCCGCTCCTCCGGGCGCCAGGGACTCCACTGTATTaGCGGTGCGCAGCGCGCTGCGCGCTGGGCTGTAGCTCTGCGACC +
Preference number: 5 (lower is better)
Translates to: VPGRPLLRAPGTPLY*RCAARCALGCSSAT
Trigger: GGTCGCAGAGCTACAGCCCAGCGCGCAGCGCGCTGCGCACCGTCAATACAGTGGAGTCCCTGGCGCCCGGAGGAGCGGACGCCCCGGGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS CCA 90 bp CGCCAGGGACTCCACTGTATTGACGGTGCGCAGCGCGCTGCGCGCTaGGCTGTAGCTCTGCGACCACAGCGAGCGGTTCTGCTGCGGGTA +
Preference number: 5 (lower is better)
Translates to: RQGLHCIDGAQRAAR*AVALRPQRAVLLRV
Trigger: TACCCGCAGCAGAACCGCTCGCTGTGGTCGCAGAGCTACAGCCCAGCGCGCAGCGCGCTGCGCACCGTCAATACAGTGGAGTCCCTGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp CGTTTGACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACGCTCCCGACGCTTaGTCCGTGGGCGACGGCGTG +
Preference number: 5 (lower is better)
Translates to: RLTKHVHGTDRGGAGPSADAPDA*SVGDGV
Trigger: CACGCCGTCGCCCACGGACAAAGCGTCGGGAGCGTC...AGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGTCAAACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp ACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGGGCCGCTCCTTGAGCTaGAGCACCAGCTGCGTGGGC +
Preference number: 5 (lower is better)
Translates to: TKHVHGTDRGGAGPSADQGRSLS*STSCVG
Trigger: GCCCACGCAGCTGGTGCTCAAGCTCAAGGAGCGGCC...CTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS GCA 90 bp GAGATCCCCCGGGACAGGCGCTTCTCTGCTTGGGCAATATCGTCCTaGCTCTGCAGGCAAGGCCGCTCCACCTTGTGCCCAGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: EIPRDRRFSAWAISS*LCRQGRSTLCPGWG
Trigger: GCCCCAGCCTGGGCACAAGGTGGAGCGGCCTTGCCTGCAGAGGCAGGACGATATTGCCCAAGCAGAGAAGCGCCTGTCCCGGGGGATCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS GCA 90 bp TGGGAGATCCCCCGGGACAGGCGCTTCTCTTGGGCAATATCGTCCTaGCTCTGCAGGCAAGGCCGCTCCACCTTGTGCCCAGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: WEIPRDRRFSWAISS*LCRQGRSTLCPGWG
Trigger: GCCCCAGCCTGGGCACAAGGTGGAGCGGCCTTGCCTGCAGAGGCAGGACGATATTGCCCAAGAGAAGCGCCTGTCCCGGGGGATCTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177534.2
CDS-3UTR CAA 90 bp ACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGCAAGGCCGCTCCACCTaGTGCCCAGGCTGGGGCAAT +
Preference number: 5 (lower is better)
Translates to: TKHVHGTDRGGAGPSADQQGRST*CPGWGN
Trigger: ATTGCCCCAGCCTGGGCACAAGGTGGAGCGGCCTTG...CTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp CGTTTGACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGGGCTCGGCCGCTCCTaGAGCTTGAGCACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RLTKHVHGTDRGGAGPSAGLGRS*SLSTSC
Trigger: GCAGCTGGTGCTCAAGCTCAAGGAGCGGCCGAGCCC...AGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGTCAAACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS TCA 90 bp GTCCGAGTCCAGCGATTCCGCCAGGGACTGTACATCCTCCCCTGCTaGGGCCGTTGGAGACTCTGGCTGTGCAAGGGGAGCCCGGGTCTC +
Preference number: 5 (lower is better)
Translates to: VRVQRFRQGLYILPC*GRWRLWLCKGSPGL
Trigger: GAGACCCGGGCTCCCCTTGCACAGCCAGAGTCTCCAACGGCCTCAGCAGGGGAGGATGTACAGTCCCTGGCGGAATCGCTGGACTCGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CCA 90 bp TCGTCCTGCCTCTGCAGGCAAGGCCGCTCCACCTTGTGCCCAGGCTaGGGCAATTCTCGCTCGGCCTGCTTGGCACACCTCCCTTCGTTG +
Preference number: 5 (lower is better)
Translates to: SSCLCRQGRSTLCPG*GNSRSACLAHLPSL
Trigger: CAACGAAGGGAGGTGTGCCAAGCAGGCCGAGCGAGAATTGCCCCAGCCTGGGCACAAGGTGGAGCGGCCTTGCCTGCAGAGGCAGGACGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS-3UTR CAA 90 bp CGTTTGACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGAGCAGTGGCACCTGTaGGGAGGCACCTCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: RLTKHVHGTDRGGAGPSAEQWHL*GGTSKG
Trigger: GCCCTTGGAGGTGCCTCCCAACAGGTGCCACTGCTC...AGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGTCAAACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp GTCTTCTCCGACGGCGAGGTGCTCGCTGACGCTCCCGATTCCTCCTTGCTGCCCCCCCTGCTGAGGCCGTaGGAGACTCTGGCTGTGCAA +
Preference number: 5 (lower is better)
Translates to: VFSDGEVLADAPDSSLLPPLLRP*ETLAVQ
Trigger: TTGCACAGCCAGAGTCTCCAACGGCCTCAGCAGGGG...GGGCAGCAAGGAGGAATCGGGAGCGTCAGCGAGCACCTCGCCGTCGGAGAAGAC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR CAA 90 bp CGTTTGACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTTCCAGGCATCGCCTCTaGACCCGCTCCCCTTGTCGG +
Preference number: 5 (lower is better)
Translates to: RLTKHVHGTDRGGAGPSASRHRL*TRSPCR
Trigger: CCGACAAGGGGAGCGGGTCAAGAGGCGATGCCTGGA...AGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGTCAAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp ACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGGAATTTGCGCTCGCCTaGCATGGCGGCGCGCAGGAT +
Preference number: 5 (lower is better)
Translates to: TKHVHGTDRGGAGPSADQEFALA*HGGAQD
Trigger: ATCCTGCGCGCCGCCATGCAAGGCGAGCGCAAATTC...CTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS GCA 90 bp TGGGCAATATCGTCCTGCCTCTGCAGGCAAGGCCGCTCCACCTTGTaGCCAGGCTGGGGCAATTCTCGCTCGGCCTGCTTGGCACACCTC +
Preference number: 5 (lower is better)
Translates to: WAISSCLCRQGRSTL*PGWGNSRSACLAHL
Trigger: GAGGTGTGCCAAGCAGGCCGAGCGAGAATTGCCCCAGCCTGGGCACAAGGTGGAGCGGCCTTGCCTGCAGAGGCAGGACGATATTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS GCA 90 bp CCCCGGGACAGGCGCTTCTCTGCTTGGGCAATATCGTCCTGCCTCTaGAGGCAAGGCCGCTCCACCTTGTGCCCAGGCTGGGGCAATTCT +
Preference number: 5 (lower is better)
Translates to: PRDRRFSAWAISSCL*RQGRSTLCPGWGNS
Trigger: AGAATTGCCCCAGCCTGGGCACAAGGTGGAGCGGCCTTGCCTGCAGAGGCAGGACGATATTGCCCAAGCAGAGAAGCGCCTGTCCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp TGGCTGGTGAGCAGCAGGCCGGCGAAGATGAATTTGCGCTCGCCTTGCATGGCGCTGAAGCTGCCCAGCTaGTTGGCCACGGAGTCCGCG +
Preference number: 5 (lower is better)
Translates to: WLVSSRPAKMNLRSPCMALKLPS*LATESA
Trigger: CGCGGACTCCGTGGCCAACAAGCTGGGCAGCTTCAG...CGCCATGCAAGGCGAGCGCAAATTCATCTTCGCCGGCCTGCTGCTCACCAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS GCA 90 bp GGCCGCTCCACCTTGTGCCCAGGCTGGGGCAATTCTCGCTCGGCCTaGTTGGCACACCTCCCTTCGTTGAACACATGTGGCAGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: GRSTLCPGWGNSRSA*LAHLPSLNTCGRLA
Trigger: AGCCAACCTGCCACATGTGTTCAACGAAGGGAGGTGTGCCAAGCAGGCCGAGCGAGAATTGCCCCAGCCTGGGCACAAGGTGGAGCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS GCA 90 bp ATCCCCCGGGACAGGCGCTTCTCTTGGGCAATATCGTCCTGCCTCTaGAGGCAAGGCCGCTCCACCTTGTGCCCAGGCTGGGGCAATTCT +
Preference number: 5 (lower is better)
Translates to: IPRDRRFSWAISSCL*RQGRSTLCPGWGNS
Trigger: AGAATTGCCCCAGCCTGGGCACAAGGTGGAGCGGCCTTGCCTGCAGAGGCAGGACGATATTGCCCAAGAGAAGCGCCTGTCCCGGGGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177534.2
CDS-3UTR CAA 90 bp GCGCGCAGGATGTTGAGGCTCAGCTTTACGTCCGTGCTGTACTTCCAGGCATCGAAGCTGCCCAGCTTGTaGGCCACGGAGTCCGCGCGC +
Preference number: 5 (lower is better)
Translates to: ARRMLRLSFTSVLYFQASKLPSL*ATESAR
Trigger: GCGCGCGGACTCCGTGGCCAACAAGCTGGGCAGCTT...CGATGCCTGGAAGTACAGCACGGACGTAAAGCTGAGCCTCAACATCCTGCGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR CAA 90 bp ACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGTTGATGCCCAGCGTCTaGCTGAAGCTGCCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TKHVHGTDRGGAGPSADQLMPSV*LKLPSL
Trigger: CAAGCTGGGCAGCTTCAGCAAGACGCTGGGCATCAA...CTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS TCA 90 bp GTCCGAGTCCAGCGATTCCGCCAGGGACTGTACATCCTCCCCTGCTaGGGCCGTTGGAGACTCTGGCTGTGCAAGGGGAGCTTGGCTAAC +
Preference number: 5 (lower is better)
Translates to: VRVQRFRQGLYILPC*GRWRLWLCKGSLAN
Trigger: GTTAGCCAAGCTCCCCTTGCACAGCCAGAGTCTCCAACGGCCTCAGCAGGGGAGGATGTACAGTCCCTGGCGGAATCGCTGGACTCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS CCA 90 bp GAGCTTGATCGTAGGCCAGAACCAGGGGTGAGCAGTGGCACCTGTTaGGAGGCACCTCCAAGGGCAGGTAGATCCCTCCGAATGGGATGG +
Preference number: 5 (lower is better)
Translates to: ELDRRPEPGVSSGTC*EAPPRAGRSLRMGW
Trigger: CCATCCCATTCGGAGGGATCTACCTGCCCTTGGAGGTGCCTCCCAACAGGTGCCACTGCTCACCCCTGGTTCTGGCCTACGATCAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS-3UTR CAA 90 bp CGTTTGACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTTCCCATTCCTCCTCCTaGTTCTGCTGTGTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RLTKHVHGTDRGGAGPSASHSSS*FCCVCC
Trigger: GCAGCAGACACAGCAGAACAAGGAGGAGGAATGGGA...AGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGTCAAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp TGGCTGGTGAGCAGCAGGCCGGCGAAGATGAATTTGCGCTCGCCTTGCATGGCGTTGATGCCCAGCGTCTaGCTGAAGCTGCCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: WLVSSRPAKMNLRSPCMALMPSV*LKLPSL
Trigger: CAAGCTGGGCAGCTTCAGCAAGACGCTGGGCATCAA...CGCCATGCAAGGCGAGCGCAAATTCATCTTCGCCGGCCTGCTGCTCACCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR CAA 90 bp ACCAAACACGTACACGGCACTGACCGAGGAGGCGCCGGCCCTTCGGCTGACCAGCTGCCCTTGCGCGACTaGGACTTTTTCTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: TKHVHGTDRGGAGPSADQLPLRD*DFFSLL
Trigger: CAACAAGGAGAAAAAGTCCAAGTCGCGCAAGGGCAG...CTGGTCAGCCGAAGGGCCGGCGCCTCCTCGGTCAGTGCCGTGTACGTGTTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS TCA 90 bp GCTGGGGCAATTCTCGCTCGGCCTGCTTGGCACACCTCCCTTCGTTaGACACATGTGGCAGGTTGGCTGTGTGCACCTGTCGCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: AGAILARPAWHTSLR*THVAGWLCAPVAVA
Trigger: AGCAACTGCGACAGGTGCACACAGCCAACCTGCCACATGTGTTCAACGAAGGGAGGTGTGCCAAGCAGGCCGAGCGAGAATTGCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS GCA 90 bp CACCAGTTCAGGCGACCTGCTTGCTCCAGAGCTACCATAGTGGCCTaGTCGATCAGGTCCCGTTCGATGAAGCTCCTGAAGTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: HQFRRPACSRATIVA*SIRSRSMKLLKSSL
Trigger: CAGTGAGGACTTCAGGAGCTTCATCGAACGGGACCTGATCGAGCAGGCCACTATGGTAGCTCTGGAGCAAGCAGGTCGCCTGAACTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CCA 90 bp TTCTCGCTCGGCCTGCTTGGCACACCTCCCTTCGTTGAACACATGTaGCAGGTTGGCTGTGTGCACCTGTCGCAGTTGCTCATAGTCGCT +
Preference number: 5 (lower is better)
Translates to: FSLGLLGTPPFVEHM*QVGCVHLSQLLIVA
Trigger: AGCGACTATGAGCAACTGCGACAGGTGCACACAGCCAACCTGCCACATGTGTTCAACGAAGGGAGGTGTGCCAAGCAGGCCGAGCGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS-3UTR CAA 90 bp CTCGCCTTGCATGGCGGCGCGCAGGATGTTGAGGCTCAGCTTTACGTCCGTGCTGTCTTGTCCTTGTCCTaGCGCTGTTTCTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LALHGGAQDVEAQLYVRAVLSLS*RCFSFS
Trigger: AGAGAAGGAGAAACAGCGCAAGGACAAGGACAAGAC...AGCACGGACGTAAAGCTGAGCCTCAACATCCTGCGCGCCGCCATGCAAGGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS GCA 90 bp TCGCCGTTTTTGCCGTTGGCAGAGTTGGCACGACCCATCTTACCGTaGACCAGGCCGCCTAGCCCGCCCATGTTTTTCTTTAGCTTGATG +
Preference number: 5 (lower is better)
Translates to: SPFLPLAELARPILP*TRPPSPPMFFFSLM
Trigger: CATCAAGCTAAAGAAAAACATGGGCGGGCTAGGCGGCCTGGTGCACGGTAAGATGGGTCGTGCCAACTCTGCCAACGGCAAAAACGGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS-3UTR CAA 90 bp CACACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGAAGCTGCCCAGCTTGTaGGCCACGGAGTCCGCGCGC +
Preference number: 5 (lower is better)
Translates to: HTHFQQYDLFPIRLLPEWKLPSL*ATESAR
Trigger: GCGCGCGGACTCCGTGGCCAACAAGCTGGGCAGCTT...CCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS CCA 90 bp TGTTGGGAGGCACCTCCAAGGGCAGGTAGATCCCTCCGAATGGGATaGGTGCAAATGCTTCTCCACCAGAGTCTCTTAGCATGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: CWEAPPRAGRSLRMG*VQMLLHQSLLAWCL
Trigger: CAGACACCATGCTAAGAGACTCTGGTGGAGAAGCATTTGCACCCATCCCATTCGGAGGGATCTACCTGCCCTTGGAGGTGCCTCCCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS-3UTR CAA 90 bp TTGGCACGACCCATCTTACCGTGCACCAGGCCGCCTAGCCCGCCCATGTTTTTCTTATTGCTGTTGGAATaGCTGCACACAGAATCGCGG +
Preference number: 5 (lower is better)
Translates to: LARPILPCTRPPSPPMFFLLLLE*LHTESR
Trigger: CCGCGATTCTGTGTGCAGCAATTCCAACAGCAATAA...GAAAAACATGGGCGGGCTAGGCGGCCTGGTGCACGGTAAGATGGGTCGTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR CAA 90 bp CACACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCTGAAGCTGCCCAGCTaGTTGGCCACGGAGTCCGCG +
Preference number: 5 (lower is better)
Translates to: HTHFQQYDLFPIRLLPEWLKLPS*LATESA
Trigger: CGCGGACTCCGTGGCCAACAAGCTGGGCAGCTTCAG...CCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS CCA 90 bp CGAATGGGATGGGTGCAAATGCTTCTCCACCAGAGTCTCTTAGCATaGTGTCTGCCACCACCACAATGGGTCTCCGTAGTATGTGGGCGA +
Preference number: 5 (lower is better)
Translates to: RMGWVQMLLHQSLLA*CLPPPQWVSVVCGR
Trigger: TCGCCCACATACTACGGAGACCCATTGTGGTGGTGGCAGACACCATGCTAAGAGACTCTGGTGGAGAAGCATTTGCACCCATCCCATTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS-3UTR CAA 90 bp CACACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCCCCTGCTGAGGCCGTaGGAGACTCTGGCTGTGCAA +
Preference number: 5 (lower is better)
Translates to: HTHFQQYDLFPIRLLPEWPLLRP*ETLAVQ
Trigger: TTGCACAGCCAGAGTCTCCAACGGCCTCAGCAGGGG...CCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp CTCTTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCACCGGCGAAGATGAATTaGCGCTCGCCTTGCATGGCG +
Preference number: 5 (lower is better)
Translates to: LLQWLLSFHRYEADARLAPAKMN*RSPCMA
Trigger: CGCCATGCAAGGCGAGCGCAAATTCATCTTCGCCGG...TGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp CTCTTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCAGTGCCACTGCCATTCTaGCTGAAGTGTGTGCGAGGC +
Preference number: 5 (lower is better)
Translates to: LLQWLLSFHRYEADARLAVPLPF*LKCVRG
Trigger: GCCTCGCACACACTTCAGCAAGAATGGCAGTGGCAC...TGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp CGTTTTTGCCGTTGGCAGAGTTGGCACGACCCATCTTACCGTGCACCAGGCCGCTTGCCATTATTGCTGTaGGAATTGCTGCACACAGAA +
Preference number: 5 (lower is better)
Translates to: RFCRWQSWHDPSYRAPGRLPLLL*ELLHTE
Trigger: TTCTGTGTGCAGCAATTCCAACAGCAATAATGGCAA...GCGGCCTGGTGCACGGTAAGATGGGTCGTGCCAACTCTGCCAACGGCAAAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR CAA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATGCGGCGCGCAGGATGTaGAGGCTCAGCTTTACGTCC +
Preference number: 5 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHAARRM*RLSFTS
Trigger: GGACGTAAAGCTGAGCCTCAACATCCTGCGCGCCGC...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS GCA 90 bp CCTTCTCTTTGTCCTTACCATTCTTGCCATTATTGCTGTTGGAATTaGTGCACACAGAATCGCGGTCCGAGTCCAGCGATTCCGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PSLCPYHSCHYCCWN*CTQNRGPSPAIPPG
Trigger: CCCTGGCGGAATCGCTGGACTCGGACCGCGATTCTGTGTGCAGCAATTCCAACAGCAATAATGGCAAGAATGGTAAGGACAAAGAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000058476.14
ENSMUST00000177511.2
ENSMUST00000177534.2
CDS CCA 90 bp AGTCCTCACTGTACACGCTCAGGTCCGGCAGCTGGAATGTATAGATaGGCATCTCCAGTGGGAACTGCTCATTGTTGCACTCATTTGCCA +
Preference number: 5 (lower is better)
Translates to: SPHCTRSGPAAGMYR*ASPVGTAHCCTHLP
Trigger: TGGCAAATGAGTGCAACAATGAGCAGTTCCCACTGGAGATGCCCATCTATACATTCCAGCTGCCGGACCTGAGCGTGTACAGTGAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CCA 90 bp CTTCTCCACCAGAGTCTCTTAGCATGGTGTCTGCCACCACCACAATaGGTCTCCGTAGTATGTGGGCGAGGACAAAGACATGGAACTCTT +
Preference number: 5 (lower is better)
Translates to: LLHQSLLAWCLPPPQ*VSVVCGRGQRHGTL
Trigger: AAGAGTTCCATGTCTTTGTCCTCGCCCACATACTACGGAGACCCATTGTGGTGGTGGCAGACACCATGCTAAGAGACTCTGGTGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS-3UTR CAA 90 bp CCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCAACACATGTGGCAGGTaGGCTGTGTGCACCTGTCGC +
Preference number: 5 (lower is better)
Translates to: PTSNSMTCFLSVYYLSGINTCGR*AVCTCR
Trigger: GCGACAGGTGCACACAGCCAACCTGCCACATGTGTT...GATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS GCA 90 bp TCTCTTTGTCCTTACCATTCTTGCCATTATTGCTGTTGGAATTGCTaGACACAGAATCGCGGTCCGAGTCCAGCGATTCCGCCAGGGACT +
Preference number: 5 (lower is better)
Translates to: SLCPYHSCHYCCWNC*TQNRGPSPAIPPGT
Trigger: AGTCCCTGGCGGAATCGCTGGACTCGGACCGCGATTCTGTGTGCAGCAATTCCAACAGCAATAATGGCAAGAATGGTAAGGACAAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000058476.14
ENSMUST00000177511.2
ENSMUST00000177534.2
CDS-3UTR CAA 90 bp CCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCGCACACCTCCCTTCGTaGAACACATGTGGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PTSNSMTCFLSVYYLSGIAHLPS*NTCGRL
Trigger: CAACCTGCCACATGTGTTCAACGAAGGGAGGTGTGC...GATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp CCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCCATTGTTGCACTCATTaGCCACGTGGGATCGGGCCA +
Preference number: 5 (lower is better)
Translates to: PTSNSMTCFLSVYYLSGIHCCTH*PRGIGP
Trigger: TGGCCCGATCCCACGTGGCAAATGAGTGCAACAATG...GATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp CCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCGTTCAGGCGACCTGCTaGCTCCAGAGCTACCATAGT +
Preference number: 5 (lower is better)
Translates to: PTSNSMTCFLSVYYLSGIVQATC*LQSYHS
Trigger: ACTATGGTAGCTCTGGAGCAAGCAGGTCGCCTGAAC...GATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp TTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCACACAACCGGGCATTGTCGTaGTCATCTTTCCCCCATTCC +
Preference number: 5 (lower is better)
Translates to: LQWLLSFHRYEADARLAHNRALS*SSFPHS
Trigger: GGAATGGGGGAAAGATGACAACGACAATGCCCGGTT...GTGTGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp CACACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGTCCTCCTTGCTGCCCTaGCGCGACTTGGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: HTHFQQYDLFPIRLLPEWSSLLP*RDLDFF
Trigger: GAAAAAGTCCAAGTCGCGCAAGGGCAGCAAGGAGGA...CCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS CCA 90 bp TCAGAGGGATCACAGCTTGTTCTCTCTGTTGGTCTCTCTGTTCCATaGACACTAGGGCTGAAAAGTGAGCTTGATCGTAGGCCAGAACCA +
Preference number: 5 (lower is better)
Translates to: SEGSQLVLSVGLSVP*TLGLKSELDRRPEP
Trigger: TGGTTCTGGCCTACGATCAAGCTCACTTTTCAGCCCTAGTGTCCATGGAACAGAGAGACCAACAGAGAGAACAAGCTGTGATCCCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS-3UTR CAA 90 bp TCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCAGTGTAACAGGGTCCTCAGAGTaGTCCACACCACCACCTGTG +
Preference number: 5 (lower is better)
Translates to: SNSMTCFLSVYYLSGISVTGSSE*STPPPV
Trigger: CACAGGTGGTGGTGTGGACAACTCTGAGGACCCTGT...TACACTGATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp TCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCAGTGTATGCAAGGGCAGCAGCTaGTGTTCCGAATCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: SNSMTCFLSVYYLSGISVCKGSS*CSESVR
Trigger: TCTGACGGATTCGGAACACAAGCTGCTGCCCTTGCA...TACACTGATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp CCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCTGTAGAAGGTTCAGCTaGGCTTCTAGGGACAGGATG +
Preference number: 5 (lower is better)
Translates to: PTSNSMTCFLSVYYLSGICRRFS*ASRDRM
Trigger: CATCCTGTCCCTAGAAGCCAAGCTGAACCTTCTACA...GATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp CTCTTGCAATGGCTATTGAGTTTCCACAGGTACGAGGCAGATGCTAGGCTAGCATTATTGCTGTTGGAATaGCTGCACACAGAATCGCGG +
Preference number: 5 (lower is better)
Translates to: LLQWLLSFHRYEADARLALLLLE*LHTESR
Trigger: CCGCGATTCTGTGTGCAGCAATTCCAACAGCAATAA...TGCTAGCCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp CAGGATGTTGAGGCTCAGCTTTACGTCCGTGCTGTACTTCCAGGCATCGCCTCTTTGTCCTTACCATTCTaGCCATTATTGCTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: QDVEAQLYVRAVLPGIASLSLPF*PLLLLE
Trigger: TTCCAACAGCAATAATGGCAAGAATGGTAAGGACAA...AGAGGCGATGCCTGGAAGTACAGCACGGACGTAAAGCTGAGCCTCAACATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177511.2
CDS-3UTR CAA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATGTCTTGTCCTTGTCCTaGCGCTGTTTCTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHVLSLS*RCFSFS
Trigger: AGAGAAGGAGAAACAGCGCAAGGACAAGGACAAGAC...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp TCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCAGTGTACAGAGGGATCACAGCTaGTTCTCTCTGTTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: SNSMTCFLSVYYLSGISVQRDHS*FSLLVS
Trigger: AGAGACCAACAGAGAGAACAAGCTGTGATCCCTCTG...TACACTGATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp CACACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGATGTTTTTCTTTAGCTaGATGCCCAGCGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: HTHFQQYDLFPIRLLPEWMFFFS*MPSVLL
Trigger: CAGCAAGACGCTGGGCATCAAGCTAAAGAAAAACAT...CCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp ACCCACTTCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATTTGCCATTATTGCTGTaGGAATTGCTGCACACAGAA +
Preference number: 5 (lower is better)
Translates to: THFQQYDLFPIRLLPEWHLPLLL*ELLHTE
Trigger: TTCTGTGTGCAGCAATTCCAACAGCAATAATGGCAA...ATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGAAGTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS-3UTR CAA 90 bp TCCAACAGTATGACTTGTTTCCTATCCGTCTACTACCTGAGTGGCATCAGTGTATTGTCCTTACCATTCTaGCCATTATTGCTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: SNSMTCFLSVYYLSGISVLSLPF*PLLLLE
Trigger: TTCCAACAGCAATAATGGCAAGAATGGTAAGGACAA...TACACTGATGCCACTCAGGTAGTAGACGGATAGGAAACAAGTCATACTGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS CCA 72 bp CGGGCCCGGCGCACCTTCGGCCTCTGGCCTGCGCGCTaGCCGCTTGACCGTGGCGGTGGCCGTGGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RARRTFGLWPAR*PLDRGGGRGCC
Trigger: GCAGCAGCCACGGCCACCGCCACGGTCAAGCGGCCAGCGCGCAGGCCAGAGGCCGAAGGTGCGCCGGGCCCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS GCA 72 bp GGCCGCTCCTTGAGCTTGAGCACCAGCTGCGTGGGCTaGGCGGCTGTCGGGCCCGGCGAGGCGCGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: GRSLSLSTSCVG*AAVGPGEARSG
Trigger: CCCGGAGCGCGCCTCGCCGGGCCCGACAGCCGCGCAGCCCACGCAGCTGGTGCTCAAGCTCAAGGAGCGGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS CAA 90 bp GCCCGTGCGCTCGCTCCAGTCCCGGGGCTCGGCCGCTCCTTGAGCTaGAGCACCAGCTGCGTGGGCTGCGCGGCTGTCGGGCCCGGCGAG +
Preference number: 6 (lower is better)
Translates to: ARALAPVPGLGRSLS*STSCVGCAAVGPGE
Trigger: CTCGCCGGGCCCGACAGCCGCGCAGCCCACGCAGCTGGTGCTCAAGCTCAAGGAGCGGCCGAGCCCCGGGACTGGAGCGAGCGCACGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS CAA 90 bp CGAGCCGCCCGTGCGCTCGCTCCAGTCCCGGGGCTCGGCCGCTCCTaGAGCTTGAGCACCAGCTGCGTGGGCTGCGCGGCTGTCGGGCCC +
Preference number: 6 (lower is better)
Translates to: RAARALAPVPGLGRS*SLSTSCVGCAAVGP
Trigger: GGGCCCGACAGCCGCGCAGCCCACGCAGCTGGTGCTCAAGCTCAAGGAGCGGCCGAGCCCCGGGACTGGAGCGAGCGCACGGGCGGCTCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS CAA 72 bp CTCGCTCCAGTCCCGGGGCTCGGCCGCTCCTTGAGCTaGAGCACCAGCTGCGTGGGCTGCGCGGCTGTCGGG +
Preference number: 6 (lower is better)
Translates to: LAPVPGLGRSLS*STSCVGCAAVG
Trigger: CCCGACAGCCGCGCAGCCCACGCAGCTGGTGCTCAAGCTCAAGGAGCGGCCGAGCCCCGGGACTGGAGCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS CAA 72 bp CGTGCGCTCGCTCCAGTCCCGGGGCTCGGCCGCTCCTaGAGCTTGAGCACCAGCTGCGTGGGCTGCGCGGCT +
Preference number: 6 (lower is better)
Translates to: RALAPVPGLGRS*SLSTSCVGCAA
Trigger: AGCCGCGCAGCCCACGCAGCTGGTGCTCAAGCTCAAGGAGCGGCCGAGCCCCGGGACTGGAGCGAGCGCACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS GCA 72 bp CGAACTCCAGCCCGTCGCGGGCTGCGCCGAAGCCGTTaGTGTAGGTCTGCGACTTGTGCTCCGCGGGTCCCG +
Preference number: 6 (lower is better)
Translates to: RTPARRGLRRSR*CRSATCAPRVP
Trigger: CGGGACCCGCGGAGCACAAGTCGCAGACCTACAGCAACGGCTTCGGCGCAGCCCGCGACGGGCTGGAGTTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS GCA 72 bp CGCGTCGGCGTCGGCGAACTCCAGCCCGTCGCGGGCTaGGCCGAAGCCGTTGCTGTAGGTCTGCGACTTGTG +
Preference number: 6 (lower is better)
Translates to: RVGVGELQPVAG*AEAVAVGLRLV
Trigger: CACAAGTCGCAGACCTACAGCAACGGCTTCGGCGCAGCCCGCGACGGGCTGGAGTTCGCCGACGCCGACGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS CCA 72 bp CTCCACTGTATTGACGGTGCGCAGCGCGCTGCGCGCTaGGCTGTAGCTCTGCGACCACAGCGAGCGGTTCTG +
Preference number: 6 (lower is better)
Translates to: LHCIDGAQRAAR*AVALRPQRAVL
Trigger: CAGAACCGCTCGCTGTGGTCGCAGAGCTACAGCCCAGCGCGCAGCGCGCTGCGCACCGTCAATACAGTGGAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS CAA 72 bp CCGCCAGGGACTGTACATCCTCCCCTGCTGAGGCCGTaGGAGACTCTGGCTGTGCAAGGGGAGCCCGGGTCT +
Preference number: 6 (lower is better)
Translates to: PPGTVHPPLLRP*ETLAVQGEPGS
Trigger: AGACCCGGGCTCCCCTTGCACAGCCAGAGTCTCCAACGGCCTCAGCAGGGGAGGATGTACAGTCCCTGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS GCA 72 bp CCCCGGGACAGGCGCTTCTCTTGGGCAATATCGTCCTaGCTCTGCAGGCAAGGCCGCTCCACCTTGTGCCCA +
Preference number: 6 (lower is better)
Translates to: PRDRRFSWAISS*LCRQGRSTLCP
Trigger: TGGGCACAAGGTGGAGCGGCCTTGCCTGCAGAGGCAGGACGATATTGCCCAAGAGAAGCGCCTGTCCCGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177534.2
CDS CAA 90 bp GCTTGGGCAATATCGTCCTGCCTCTGCAGGCAAGGCCGCTCCACCTaGTGCCCAGGCTGGGGCAATTCTCGCTCGGCCTGCTTGGCACAC +
Preference number: 6 (lower is better)
Translates to: AWAISSCLCRQGRST*CPGWGNSRSACLAH
Trigger: GTGTGCCAAGCAGGCCGAGCGAGAATTGCCCCAGCCTGGGCACAAGGTGGAGCGGCCTTGCCTGCAGAGGCAGGACGATATTGCCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058476.14
CDS TCA 72 bp CAGCGATTCCGCCAGGGACTGTACATCCTCCCCTGCTaGGGCCGTTGGAGACTCTGGCTGTGCAAGGGGAGC +
Preference number: 6 (lower is better)
Translates to: QRFRQGLYILPC*GRWRLWLCKGS
Trigger: GCTCCCCTTGCACAGCCAGAGTCTCCAACGGCCTCAGCAGGGGAGGATGTACAGTCCCTGGCGGAATCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000058476.14
ENSMUST00000177511.2
ENSMUST00000177534.2
CDS CCA 72 bp CGTAGGCCAGAACCAGGGGTGAGCAGTGGCACCTGTTaGGAGGCACCTCCAAGGGCAGGTAGATCCCTCCGA +
Preference number: 6 (lower is better)
Translates to: RRPEPGVSSGTC*EAPPRAGRSLR
Trigger: TCGGAGGGATCTACCTGCCCTTGGAGGTGCCTCCCAACAGGTGCCACTGCTCACCCCTGGTTCTGGCCTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CAA 90 bp TCTTGGGCAATATCGTCCTGCCTCTGCAGGCAAGGCCGCTCCACCTaGTGCCCAGGCTGGGGCAATTCTCGCTCGGCCTGCTTGGCACAC +
Preference number: 6 (lower is better)
Translates to: SWAISSCLCRQGRST*CPGWGNSRSACLAH
Trigger: GTGTGCCAAGCAGGCCGAGCGAGAATTGCCCCAGCCTGGGCACAAGGTGGAGCGGCCTTGCCTGCAGAGGCAGGACGATATTGCCCAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177534.2
CDS CAA 90 bp CGCTCCACCTTGTGCCCAGGCTGGGGCAATTCTCGCTCGGCCTGCTaGGCACACCTCCCTTCGTTGAACACATGTGGCAGGTTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: RSTLCPGWGNSRSAC*AHLPSLNTCGRLAV
Trigger: CACAGCCAACCTGCCACATGTGTTCAACGAAGGGAGGTGTGCCAAGCAGGCCGAGCGAGAATTGCCCCAGCCTGGGCACAAGGTGGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CAA 90 bp GGCTGGGGCAATTCTCGCTCGGCCTGCTTGGCACACCTCCCTTCGTaGAACACATGTGGCAGGTTGGCTGTGTGCACCTGTCGCAGTTGC +
Preference number: 6 (lower is better)
Translates to: GWGNSRSACLAHLPS*NTCGRLAVCTCRSC
Trigger: GCAACTGCGACAGGTGCACACAGCCAACCTGCCACATGTGTTCAACGAAGGGAGGTGTGCCAAGCAGGCCGAGCGAGAATTGCCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS GCA 72 bp ACCTTGTGCCCAGGCTGGGGCAATTCTCGCTCGGCCTaGTTGGCACACCTCCCTTCGTTGAACACATGTGGC +
Preference number: 6 (lower is better)
Translates to: TLCPGWGNSRSA*LAHLPSLNTCG
Trigger: GCCACATGTGTTCAACGAAGGGAGGTGTGCCAAGCAGGCCGAGCGAGAATTGCCCCAGCCTGGGCACAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CAA 72 bp TTGTGCCCAGGCTGGGGCAATTCTCGCTCGGCCTGCTaGGCACACCTCCCTTCGTTGAACACATGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: LCPGWGNSRSAC*AHLPSLNTCGR
Trigger: CCTGCCACATGTGTTCAACGAAGGGAGGTGTGCCAAGCAGGCCGAGCGAGAATTGCCCCAGCCTGGGCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CCA 72 bp GGCCTGCTTGGCACACCTCCCTTCGTTGAACACATGTaGCAGGTTGGCTGTGTGCACCTGTCGCAGTTGCTC +
Preference number: 6 (lower is better)
Translates to: GLLGTPPFVEHM*QVGCVHLSQLL
Trigger: GAGCAACTGCGACAGGTGCACACAGCCAACCTGCCACATGTGTTCAACGAAGGGAGGTGTGCCAAGCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS TCA 72 bp ATTCTCGCTCGGCCTGCTTGGCACACCTCCCTTCGTTaGACACATGTGGCAGGTTGGCTGTGTGCACCTGTC +
Preference number: 6 (lower is better)
Translates to: ILARPAWHTSLR*THVAGWLCAPV
Trigger: GACAGGTGCACACAGCCAACCTGCCACATGTGTTCAACGAAGGGAGGTGTGCCAAGCAGGCCGAGCGAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS GCA 72 bp AGGCGACCTGCTTGCTCCAGAGCTACCATAGTGGCCTaGTCGATCAGGTCCCGTTCGATGAAGCTCCTGAAG +
Preference number: 6 (lower is better)
Translates to: RRPACSRATIVA*SIRSRSMKLLK
Trigger: CTTCAGGAGCTTCATCGAACGGGACCTGATCGAGCAGGCCACTATGGTAGCTCTGGAGCAAGCAGGTCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS GCA 72 bp TTGCCGTTGGCAGAGTTGGCACGACCCATCTTACCGTaGACCAGGCCGCCTAGCCCGCCCATGTTTTTCTTT +
Preference number: 6 (lower is better)
Translates to: LPLAELARPILP*TRPPSPPMFFF
Trigger: AAAGAAAAACATGGGCGGGCTAGGCGGCCTGGTGCACGGTAAGATGGGTCGTGCCAACTCTGCCAACGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CCA 72 bp AGTGGGAACTGCTCATTGTTGCACTCATTTGCCACGTaGGATCGGGCCAGGGAGACGATGGCTGAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: SGNCSLLHSFAT*DRARETMAELA
Trigger: TGCCAGCTCAGCCATCGTCTCCCTGGCCCGATCCCACGTGGCAAATGAGTGCAACAATGAGCAGTTCCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CCA 72 bp GGGAGGCACCTCCAAGGGCAGGTAGATCCCTCCGAATaGGATGGGTGCAAATGCTTCTCCACCAGAGTCTCT +
Preference number: 6 (lower is better)
Translates to: GRHLQGQVDPSE*DGCKCFSTRVS
Trigger: AGAGACTCTGGTGGAGAAGCATTTGCACCCATCCCATTCGGAGGGATCTACCTGCCCTTGGAGGTGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CAA 72 bp GCATCTCCAGTGGGAACTGCTCATTGTTGCACTCATTaGCCACGTGGGATCGGGCCAGGGAGACGATGGCTG +
Preference number: 6 (lower is better)
Translates to: ASPVGTAHCCTH*PRGIGPGRRWL
Trigger: CAGCCATCGTCTCCCTGGCCCGATCCCACGTGGCAAATGAGTGCAACAATGAGCAGTTCCCACTGGAGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CAA 72 bp AATTCTCGCTCGGCCTGCTTGGCACACCTCCCTTCGTaGAACACATGTGGCAGGTTGGCTGTGTGCACCTGT +
Preference number: 6 (lower is better)
Translates to: NSRSACLAHLPS*NTCGRLAVCTC
Trigger: ACAGGTGCACACAGCCAACCTGCCACATGTGTTCAACGAAGGGAGGTGTGCCAAGCAGGCCGAGCGAGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CAA 90 bp TATAGATGGGCATCTCCAGTGGGAACTGCTCATTGTTGCACTCATTaGCCACGTGGGATCGGGCCAGGGAGACGATGGCTGAGCTGGCAT +
Preference number: 6 (lower is better)
Translates to: YRWASPVGTAHCCTH*PRGIGPGRRWLSWH
Trigger: ATGCCAGCTCAGCCATCGTCTCCCTGGCCCGATCCCACGTGGCAAATGAGTGCAACAATGAGCAGTTCCCACTGGAGATGCCCATCTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CCA 72 bp GCACCTCCAAGGGCAGGTAGATCCCTCCGAATGGGATaGGTGCAAATGCTTCTCCACCAGAGTCTCTTAGCA +
Preference number: 6 (lower is better)
Translates to: APPRAGRSLRMG*VQMLLHQSLLA
Trigger: TGCTAAGAGACTCTGGTGGAGAAGCATTTGCACCCATCCCATTCGGAGGGATCTACCTGCCCTTGGAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CAA 72 bp AGCTTGTTGGCCACGGAGTCCGCGCGCGTCTTGTCCTaGTCCTTGCGCTGTTTCTCCTTCTCTTTGTCCTTA +
Preference number: 6 (lower is better)
Translates to: SLLATESARVLS*SLRCFSFSLSL
Trigger: TAAGGACAAAGAGAAGGAGAAACAGCGCAAGGACAAGGACAAGACGCGCGCGGACTCCGTGGCCAACAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000058476.14
ENSMUST00000177511.2
ENSMUST00000177534.2
CDS CCA 72 bp TGTACACGCTCAGGTCCGGCAGCTGGAATGTATAGATaGGCATCTCCAGTGGGAACTGCTCATTGTTGCACT +
Preference number: 6 (lower is better)
Translates to: CTRSGPAAGMYR*ASPVGTAHCCT
Trigger: AGTGCAACAATGAGCAGTTCCCACTGGAGATGCCCATCTATACATTCCAGCTGCCGGACCTGAGCGTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CCA 72 bp CAGAGTCTCTTAGCATGGTGTCTGCCACCACCACAATaGGTCTCCGTAGTATGTGGGCGAGGACAAAGACAT +
Preference number: 6 (lower is better)
Translates to: QSLLAWCLPPPQ*VSVVCGRGQRH
Trigger: ATGTCTTTGTCCTCGCCCACATACTACGGAGACCCATTGTGGTGGTGGCAGACACCATGCTAAGAGACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CCA 72 bp TGGGTGCAAATGCTTCTCCACCAGAGTCTCTTAGCATaGTGTCTGCCACCACCACAATGGGTCTCCGTAGTA +
Preference number: 6 (lower is better)
Translates to: WVQMLLHQSLLA*CLPPPQWVSVV
Trigger: TACTACGGAGACCCATTGTGGTGGTGGCAGACACCATGCTAAGAGACTCTGGTGGAGAAGCATTTGCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CAA 72 bp AGAAGGTTCAGCTTGGCTTCTAGGGACAGGATGAGGTaGGCTAACCGGGCATTGTCGTTGTCATCTTTCCCC +
Preference number: 6 (lower is better)
Translates to: RRFSLASRDRMR*ANRALSLSSFP
Trigger: GGGGAAAGATGACAACGACAATGCCCGGTTAGCCAACCTCATCCTGTCCCTAGAAGCCAAGCTGAACCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CAA 90 bp TCCTTCTCTTTGTCCTTACCATTCTTGCCATTATTGCTGTTGGAATaGCTGCACACAGAATCGCGGTCCGAGTCCAGCGATTCCGCCAGG +
Preference number: 6 (lower is better)
Translates to: SFSLSLPFLPLLLLE*LHTESRSESSDSAR
Trigger: CCTGGCGGAATCGCTGGACTCGGACCGCGATTCTGTGTGCAGCAATTCCAACAGCAATAATGGCAAGAATGGTAAGGACAAAGAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000058476.14
ENSMUST00000177511.2
ENSMUST00000177534.2
CDS GCA 72 bp CCTTACCATTCTTGCCATTATTGCTGTTGGAATTGCTaGACACAGAATCGCGGTCCGAGTCCAGCGATTCCG +
Preference number: 6 (lower is better)
Translates to: PYHSCHYCCWNC*TQNRGPSPAIP
Trigger: CGGAATCGCTGGACTCGGACCGCGATTCTGTGTGCAGCAATTCCAACAGCAATAATGGCAAGAATGGTAAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000058476.14
ENSMUST00000177511.2
ENSMUST00000177534.2
CDS CAA 90 bp TCCGCGCGCGTCTTGTCCTTGTCCTTGCGCTGTTTCTCCTTCTCTTaGTCCTTACCATTCTTGCCATTATTGCTGTTGGAATTGCTGCAC +
Preference number: 6 (lower is better)
Translates to: SARVLSLSLRCFSFS*SLPFLPLLLLELLH
Trigger: GTGCAGCAATTCCAACAGCAATAATGGCAAGAATGGTAAGGACAAAGAGAAGGAGAAACAGCGCAAGGACAAGGACAAGACGCGCGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000058476.14
ENSMUST00000177511.2
ENSMUST00000177534.2
CDS TCA 72 bp TGTGTAGAAGGTTCAGCTTGGCTTCTAGGGACAGGATaGGGTTGGCTAACCGGGCATTGTCGTTGTCATCTT +
Preference number: 6 (lower is better)
Translates to: CVEGSAWLLGTG*GWLTGHCRCHL
Trigger: AAGATGACAACGACAATGCCCGGTTAGCCAACCTCATCCTGTCCCTAGAAGCCAAGCTGAACCTTCTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058476.14
ENSMUST00000177534.2
CDS CAA 72 bp TTGTCCTTACCATTCTTGCCATTATTGCTGTTGGAATaGCTGCACACAGAATCGCGGTCCGAGTCCAGCGAT +
Preference number: 6 (lower is better)
Translates to: LSLPFLPLLLLE*LHTESRSESSD
Trigger: ATCGCTGGACTCGGACCGCGATTCTGTGTGCAGCAATTCCAACAGCAATAATGGCAAGAATGGTAAGGACAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000058476.14
ENSMUST00000177511.2
ENSMUST00000177534.2
CDS CAA 72 bp TTCTCTTTGTCCTTACCATTCTTGCCATTATTGCTGTaGGAATTGCTGCACACAGAATCGCGGTCCGAGTCC +
Preference number: 6 (lower is better)
Translates to: FSLSLPFLPLLL*ELLHTESRSES
Trigger: GGACTCGGACCGCGATTCTGTGTGCAGCAATTCCAACAGCAATAATGGCAAGAATGGTAAGGACAAAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000058476.14
ENSMUST00000177511.2
ENSMUST00000177534.2