Pregenerated sensors for OTUD6B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040550Ensembl transcript IDs: ENSMUST00000117268.9, ENSMUST00000151012.3, ENSMUST00000236953.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGCTGGGGTTTGTTAGAAACGGCAGGAAGTCGTCTGAATGGGTTTaGATGTACTCAGCAGTCTGCCTCCTCAGGGAAGCCACAGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: VLGFVRNGRKSSEWV*MYSAVCLLREATVS Trigger: GCTGACTGTGGCTTCCCTGAGGAGGCAGACTGCTGAGTACATGCAAACCCATTCAGACGACTTCCTGCCGTTTCTAACAAACCCCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
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| 3UTR TCA 90 bp | CTCCCTTTCTGCATTACTTCAGCATCACCTTGCACAGGTGAGCAGTaGGAGGCCACTGGATGCCTCTCAGTAGGAAAGGCTCCAGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: LPFCITSASPCTGEQ*EATGCLSVGKAPEK Trigger: TTTCTCTGGAGCCTTTCCTACTGAGAGGCATCCAGTGGCCTCTCACTGCTCACCTGTGCAAGGTGATGCTGAAGTAATGCAGAAAGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR GCA 90 bp | CAGCTGGAATGGTCTCAGAAAGTCCGTGCTCTGCTGAGCAGTCTCTaGCAGCCTGCCAGACTATTACCTGCTTTTAACATCATAAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: QLEWSQKVRALLSSL*QPARLLPAFNIISP Trigger: TGGGCTTATGATGTTAAAAGCAGGTAATAGTCTGGCAGGCTGGCAGAGACTGCTCAGCAGAGCACGGACTTTCTGAGACCATTCCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR TCA 90 bp | GCAAAGCAGCTGAGTAGTGTTGGGGCAAGGATACAAATTCTCAGTTaGAGAGAAACAAGGTTCAACCCTGACTCCAGCCTCTGCTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: AKQLSSVGARIQILS*RETRFNPDSSLCWR Trigger: TCTCCAGCAGAGGCTGGAGTCAGGGTTGAACCTTGTTTCTCTTCAACTGAGAATTTGTATCCTTGCCCCAACACTACTCAGCTGCTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR CCA 90 bp | AGAATACACTGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATaGTCTCAGAAAGTCCGTGCTCTGCTGAGCAGTCTCTGCCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: RIHCIAGRVCFSQLE*SQKVRALLSSLCQP Trigger: AGGCTGGCAGAGACTGCTCAGCAGAGCACGGACTTTCTGAGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACAGTGTATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR TCA 90 bp | GGCAAGGATACAAATTCTCAGTTGAAGAGAAACAAGGTTCAACCCTaGCTCCAGCCTCTGCTGGAGAAACCAGCAATGCAGGAGTTACAG | + |
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Preference number: 1 (lower is better) Translates to: GKDTNSQLKRNKVQP*LQPLLEKPAMQELQ Trigger: CTGTAACTCCTGCATTGCTGGTTTCTCCAGCAGAGGCTGGAGTCAGGGTTGAACCTTGTTTCTCTTCAACTGAGAATTTGTATCCTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR GCA 90 bp | ACAAGGTTCAACCCTGACTCCAGCCTCTGCTGGAGAAACCAGCAATaGAGGAGTTACAGACTTAGGAAGCTACACATACATAAAAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: TRFNPDSSLCWRNQQ*RSYRLRKLHIHKRE Trigger: CTCCCTTTTATGTATGTGTAGCTTCCTAAGTCTGTAACTCCTGCATTGCTGGTTTCTCCAGCAGAGGCTGGAGTCAGGGTTGAACCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR GCA 90 bp | AGCCACAGTCAGCGCACAGTCTTGTTCTCTCAGCTGATCCTCAAGTaGTCCATACATACAGTGACCATCAGATGGAATCTGTTTAATTTC | + |
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Preference number: 1 (lower is better) Translates to: SHSQRTVLFSQLILK*SIHTVTIRWNLFNF Trigger: GAAATTAAACAGATTCCATCTGATGGTCACTGTATGTATGGAGCACTTGAGGATCAGCTGAGAGAACAAGACTGTGCGCTGACTGTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
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| 3UTR CCA 90 bp | CTCTGGCTGCCAATATTTGAGCAAGTTTTTCACTCTCAAGATGTCTaGCTCCAGATAAGTTCTCAATTTCAGCCTCTGCTATCCTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: LWLPIFEQVFHSQDV*LQISSQFQPLLSFL Trigger: AAGAAAGGATAGCAGAGGCTGAAATTGAGAACTTATCTGGAGCCAGACATCTTGAGAGTGAAAAACTTGCTCAAATATTGGCAGCCAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
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| 3UTR GCA 90 bp | ACAGTGACCATCAGATGGAATCTGTTTAATTTCCAATTCTCTGGCTaGCAATATTTGAGCAAGTTTTTCACTCTCAAGATGTCTGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: TVTIRWNLFNFQFSG*QYLSKFFTLKMSGS Trigger: GGAGCCAGACATCTTGAGAGTGAAAAACTTGCTCAAATATTGGCAGCCAGAGAATTGGAAATTAAACAGATTCCATCTGATGGTCACTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
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| 3UTR TCA 90 bp | TCAGATGGAATCTGTTTAATTTCCAATTCTCTGGCTGCCAATATTTaGGCAAGTTTTTCACTCTCAAGATGTCTGGCTCCAGATAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: SDGICLISNSLAANI*ASFSLSRCLAPDKF Trigger: GAACTTATCTGGAGCCAGACATCTTGAGAGTGAAAAACTTGCTCAAATATTGGCAGCCAGAGAATTGGAAATTAAACAGATTCCATCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
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| 3UTR CCA 90 bp | GCTTTTAACATCATAAGCCCAGTGTTTACTCATAGACAGTATACATaGGTCAAAAGCCCAGATATTATACACATGATGCTCTACTTAGTT | + |
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Preference number: 1 (lower is better) Translates to: AFNIISPVFTHRQYT*VKSPDIIHMMLYLV Trigger: AACTAAGTAGAGCATCATGTGTATAATATCTGGGCTTTTGACCCATGTATACTGTCTATGAGTAAACACTGGGCTTATGATGTTAAAAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGCACAGGTAACAAGGTTCAACCCTaGCTCCAGCCTCTGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SVAMALPFCITSASPCTGNKVQP*LQPLLE Trigger: CTCCAGCAGAGGCTGGAGTCAGGGTTGAACCTTGTT...ACCTGTGCAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCACATGGCAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTATGGCCCTCCCTTTCTaGATTACTTCAGCATCACCT | + |
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Preference number: 2 (lower is better) Translates to: PHMAGKCSARAVSPSHGTMALPF*ITSASP Trigger: AGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCAT...AGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTGCCATGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGCACAGGTGAGCTGCTGAGCAGTCTCTaGCAGCCTGCCAGACTATTA | + |
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Preference number: 2 (lower is better) Translates to: VAMALPFCITSASPCTGELLSSL*QPARLL Trigger: TAATAGTCTGGCAGGCTGGCAGAGACTGCTCAGCAG...CTCACCTGTGCAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGCACAGGTGAGGTTGGTGCTAGAAACTaGACCTTGAGCCTCACATGG | + |
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Preference number: 2 (lower is better) Translates to: VAMALPFCITSASPCTGEVGARN*TLSLTW Trigger: CCATGTGAGGCTCAAGGTTCAGTTTCTAGCACCAAC...CTCACCTGTGCAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCGAGTGTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGCTAGAAACTGAACCTTaGGCCTCACATGGCAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: TSECGHGPPFLHYFSITLLETEP*ASHGRQ Trigger: TTGCCTGCCATGTGAGGCTCAAGGTTCAGTTTCTAG...CAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCACACTCGCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGCGAGTGTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGGGAAGAGTAACACCTTaGTGTGTGATGACGACGTCC | + |
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Preference number: 2 (lower is better) Translates to: TSECGHGPPFLHYFSITLGRVTP*CVMTTS Trigger: GGACGTCGTCATCACACACCAAGGTGTTACTCTTCC...CAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCACACTCGCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGCACAGGTTCTTGTTCTCTCAGCTaGTCCTCAAGTGCTCCATAC | + |
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Preference number: 2 (lower is better) Translates to: SVAMALPFCITSASPCTGSCSLS*SSSAPY Trigger: GTATGGAGCACTTGAGGATCAGCTGAGAGAACAAGA...ACCTGTGCAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
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| 3UTR-3UTR GCA 90 bp | ACAAGCGAGTGTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGACAGCTCTCTGCTTCTaGCACCTTCAACTCTTGCTA | + |
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Preference number: 2 (lower is better) Translates to: TSECGHGPPFLHYFSITLTALCF*HLQLLL Trigger: TAGCAAGAGTTGAAGGTGGCAGAAGCAGAGAGCTGT...CAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCACACTCGCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTTGTTACATATGGGAGGCAGAGAGGTaGATCTTTGTGAGTACAAGA | + |
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Preference number: 2 (lower is better) Translates to: QASALLELCPHPMALCYIWEAER*IFVSTR Trigger: TCTTGTACTCACAAAGATTCACCTCTCTGCCTCCCA...TATGTAACAAAGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
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| 3UTR-3UTR GCA 90 bp | CAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTTGTTACATAACAGCTCTCTGCTTCTaGCACCTTCAACTCTTGCTA | + |
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Preference number: 2 (lower is better) Translates to: QASALLELCPHPMALCYITALCF*HLQLLL Trigger: TAGCAAGAGTTGAAGGTGGCAGAAGCAGAGAGCTGT...TATGTAACAAAGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR TCA 90 bp | TGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATGGTCTCAGAAAGTCCGTAACAAGGTTCAACCCTaGCTCCAGCCTCTGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: CIAGRVCFSQLEWSQKVRNKVQP*LQPLLE Trigger: CTCCAGCAGAGGCTGGAGTCAGGGTTGAACCTTGTT...ACGGACTTTCTGAGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTTCTCGACCTGACTCCAGCCTCTaGTGGAGAAACCAGCAATGC | + |
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Preference number: 2 (lower is better) Translates to: RANRLVCGHSSVTKNTSRPDSSL*WRNQQC Trigger: GCATTGCTGGTTTCTCCAGCAGAGGCTGGAGTCAGG...TCGAGAAGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCACATGGCAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTACAGTGACCATCAGATaGAATCTGTTTAATTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: PHMAGKCSARAVSPSHGTTVTIR*NLFNFQ Trigger: TTGGAAATTAAACAGATTCCATCTGATGGTCACTGT...AGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTGCCATGTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
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| 3UTR CAA 90 bp | ACTTCCCAAACTCTTCTGGCGTGTACATATCTCCTGTGCTGGGGTTaGTTAGAAACGGCAGGAAGTCGTCTGAATGGGTTTGCATGTACT | + |
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Preference number: 2 (lower is better) Translates to: TSQTLLACTYLLCWG*LETAGSRLNGFACT Trigger: AGTACATGCAAACCCATTCAGACGACTTCCTGCCGTTTCTAACAAACCCCAGCACAGGAGATATGTACACGCCAGAAGAGTTTGGGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
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| 3UTR-3UTR TCA 90 bp | ACACCCTTCAGAATACACTGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAAAACAAGGTTCAACCCTaGCTCCAGCCTCTGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: TPFRIHCIAGRVCFSQLENKVQP*LQPLLE Trigger: CTCCAGCAGAGGCTGGAGTCAGGGTTGAACCTTGTT...TTCCAGCTGACTAAAACATACTCTGCCTGCTATACAGTGTATTCTGAAGGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR GCA 90 bp | ACACCCTTCAGAATACACTGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAACCTGACTCCAGCCTCTaGTGGAGAAACCAGCAATGC | + |
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Preference number: 2 (lower is better) Translates to: TPFRIHCIAGRVCFSQLEPDSSL*WRNQQC Trigger: GCATTGCTGGTTTCTCCAGCAGAGGCTGGAGTCAGG...TTCCAGCTGACTAAAACATACTCTGCCTGCTATACAGTGTATTCTGAAGGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTTCTCGAGTCTCAGAAAGTCCGTaGTCTGCTGAGCAGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: RANRLVCGHSSVTKNTSRVSESP*SAEQSL Trigger: CAGAGACTGCTCAGCAGAGCACGGACTTTCTGAGAC...TCGAGAAGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTTCTCGAATGTACTCAGCAGTCTaGCTCCTCAGGGAAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: RANRLVCGHSSVTKNTSRMYSAV*LLREAT Trigger: TGTGGCTTCCCTGAGGAGGCAGACTGCTGAGTACAT...TCGAGAAGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
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| 3UTR-3UTR CCA 90 bp | TGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATGGTCTCAGAAAGTCCGTACCTTGAGCCTCACATaGCAGGCAAGTGCTCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: CIAGRVCFSQLEWSQKVRTLSLT*QASALL Trigger: TAGCAGAGCACTTGCCTGCCATGTGAGGCTCAAGGT...ACGGACTTTCTGAGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR TCA 90 bp | TGTACTGATTTTACCACACAGCTCTCTGCTTCTGCCACCTTCAACTCTTGCTATAGAAAGCAAAGCAGCTaGGTAGTGTTGGGGCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: CTDFTTQLSASATFNSCYRKQSS*VVLGQG Trigger: TCCTTGCCCCAACACTACTCAGCTGCTTTGCTTTCT...ATAGCAAGAGTTGAAGGTGGCAGAAGCAGAGAGCTGTGTGGTAAAATCAGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTTCTCGACTAGAAACTGAACCTTaGGCCTCACATGGCAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: RANRLVCGHSSVTKNTSRLETEP*ASHGRQ Trigger: TTGCCTGCCATGTGAGGCTCAAGGTTCAGTTTCTAG...TCGAGAAGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCAGACTATTACCTGCTTTTAACATCATAAGCCCAGTGTTTACTCATAGACTGCTGAGCAGTCTCTaGCAGCCTGCCAGACTATTA | + |
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Preference number: 2 (lower is better) Translates to: PARLLPAFNIISPVFTHRLLSSL*QPARLL Trigger: TAATAGTCTGGCAGGCTGGCAGAGACTGCTCAGCAG...TCTATGAGTAAACACTGGGCTTATGATGTTAAAAGCAGGTAATAGTCTGGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTAAGCGAGTGTGGCCATaGCCCTCCCTTTCTGCATTA | + |
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Preference number: 2 (lower is better) Translates to: IRRANRLVCGHSSVTKNTKRVWP*PSLSAL Trigger: TAATGCAGAAAGGGAGGGCCATGGCCACACTCGCTT...AGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGATCACCAGCACTTTATAAGGCTGATAAAGCTGCTGTCACGACAATATGTGCTCCATACATACAGTaGCCATCAGATGGAATCTGT | + |
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Preference number: 2 (lower is better) Translates to: LGSPALYKADKAAVTTICAPYIQ*PSDGIC Trigger: ACAGATTCCATCTGATGGTCACTGTATGTATGGAGC...ACATATTGTCGTGACAGCAGCTTTATCAGCCTTATAAAGTGCTGGTGATCCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
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| 3UTR-3UTR GCA 90 bp | TGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATGGTCTCAGAAAGTCCGTTGGAGAAACCAGCAATaGAGGAGTTACAGACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: CIAGRVCFSQLEWSQKVRWRNQQ*RSYRLR Trigger: CCTAAGTCTGTAACTCCTGCATTGCTGGTTTCTCCA...ACGGACTTTCTGAGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR GCA 90 bp | TGTACTGATTTTACCACACAGCTCTCTGCTTCTGCCACCTTCAACTCTTGCTATTGGAGAAACCAGCAATaGAGGAGTTACAGACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: CTDFTTQLSASATFNSCYWRNQQ*RSYRLR Trigger: CCTAAGTCTGTAACTCCTGCATTGCTGGTTTCTCCA...ATAGCAAGAGTTGAAGGTGGCAGAAGCAGAGAGCTGTGTGGTAAAATCAGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR GCA 90 bp | ACACCCTTCAGAATACACTGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAAATGGCCCTCCCTTTCTaGATTACTTCAGCATCACCT | + |
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Preference number: 2 (lower is better) Translates to: TPFRIHCIAGRVCFSQLEMALPF*ITSASP Trigger: AGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCAT...TTCCAGCTGACTAAAACATACTCTGCCTGCTATACAGTGTATTCTGAAGGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCAGACTATTACCTGCTTTTAACATCATAAGCCCAGTGTTTACTCATAGACAGTCTCTGCCAGCCTaGCAGACTATTACCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: PARLLPAFNIISPVFTHRQSLPA*QTITCF Trigger: AAAGCAGGTAATAGTCTGGCAGGCTGGCAGAGACTG...TCTATGAGTAAACACTGGGCTTATGATGTTAAAAGCAGGTAATAGTCTGGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR GCA 90 bp | TTACATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAACAGTCTCTGCCAGCCTaGCAGACTATTACCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LHKKSKQTCVWAQLCYKEQSLPA*QTITCF Trigger: AAAGCAGGTAATAGTCTGGCAGGCTGGCAGAGACTG...TTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTATGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTGGAAGAGTAACACCTTaGTGTGTGATGACGACGTCC | + |
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Preference number: 2 (lower is better) Translates to: IRRANRLVCGHSSVTKNTGRVTP*CVMTTS Trigger: GGACGTCGTCATCACACACCAAGGTGTTACTCTTCC...AGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR-3UTR CCA 90 bp | TTACATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAAGGAAGAGTAACACCTTaGTGTGTGATGACGACGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LHKKSKQTCVWAQLCYKEGRVTP*CVMTTS Trigger: GGACGTCGTCATCACACACCAAGGTGTTACTCTTCC...TTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTATGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATGGTCTCAGAAAGTCCGTACATATCTCCTGTGCTaGGGTTTGTTAGAAACGGCA | + |
|
Preference number: 2 (lower is better) Translates to: CIAGRVCFSQLEWSQKVRTYLLC*GLLETA Trigger: TGCCGTTTCTAACAAACCCCAGCACAGGAGATATGT...ACGGACTTTCTGAGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| 3UTR-3UTR TCA 90 bp | ACACCCTTCAGAATACACTGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAAAGCCAGGGTTTTCATTaGATCCTAGAAAGTGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: TPFRIHCIAGRVCFSQLESQGFH*ILESEH Trigger: GTGCTCACTTTCTAGGATTCAATGAAAACCCTGGCT...TTCCAGCTGACTAAAACATACTCTGCCTGCTATACAGTGTATTCTGAAGGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTGCCAGACTATTACCTGCTTTTAACATCATAAGCCCAGTGTTTACTCATAGAATGGCCCTCCCTTTCTaGATTACTTCAGCATCACCT | + |
|
Preference number: 2 (lower is better) Translates to: PARLLPAFNIISPVFTHRMALPF*ITSASP Trigger: AGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCAT...TCTATGAGTAAACACTGGGCTTATGATGTTAAAAGCAGGTAATAGTCTGGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGAATACACTGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATGGTCTACAGCTCTCTGCTTCTaGCACCTTCAACTCTTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: FRIHCIAGRVCFSQLEWSTALCF*HLQLLL Trigger: TAGCAAGAGTTGAAGGTGGCAGAAGCAGAGAGCTGT...AGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACAGTGTATTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAATCAAAAGTTACAAAGCAGAATACACCCTTCAGAATACACTGTATAGCAGGAAGCGAGTGTGGCCATaGCCCTCCCTTTCTGCATTA | + |
|
Preference number: 2 (lower is better) Translates to: RIKSYKAEYTLQNTLYSRKRVWP*PSLSAL Trigger: TAATGCAGAAAGGGAGGGCCATGGCCACACTCGCTT...CCTGCTATACAGTGTATTCTGAAGGGTGTATTCTGCTTTGTAACTTTTGATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAATCAAAAGTTACAAAGCAGAATACACCCTTCAGAATACACTGTATAGCAGGAGAAAGCAAAGCAGCTaGGTAGTGTTGGGGCAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: RIKSYKAEYTLQNTLYSRRKQSS*VVLGQG Trigger: TCCTTGCCCCAACACTACTCAGCTGCTTTGCTTTCT...CCTGCTATACAGTGTATTCTGAAGGGTGTATTCTGCTTTGTAACTTTTGATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR TCA 90 bp | TTACATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAAAGCCAGGGTTTTCATTaGATCCTAGAAAGTGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LHKKSKQTCVWAQLCYKESQGFH*ILESEH Trigger: GTGCTCACTTTCTAGGATTCAATGAAAACCCTGGCT...TTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTATGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGAATACACTGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATGGTCTTGGAGAAACCAGCAATaGAGGAGTTACAGACTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: FRIHCIAGRVCFSQLEWSWRNQQ*RSYRLR Trigger: CCTAAGTCTGTAACTCCTGCATTGCTGGTTTCTCCA...AGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACAGTGTATTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR CCA 90 bp | TTACATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATTTAGTCAGCTGGAATaGTCTCAGAAAGTCCGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LHKKSKQTCVWAQLCYKEFSQLE*SQKVRA Trigger: AGCACGGACTTTCTGAGACCATTCCAGCTGACTAAA...TTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTATGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR TCA 90 bp | TTACATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAACTGGCTGCCAATATTTaGGCAAGTTTTTCACTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LHKKSKQTCVWAQLCYKELAANI*ASFSLS Trigger: TGAGAGTGAAAAACTTGCTCAAATATTGGCAGCCAG...TTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTATGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| 3UTR-3UTR GCA 90 bp | ATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTTGTACATATCTCCTGTaGTGGGGTTTGTTAGAAACG | + |
|
Preference number: 2 (lower is better) Translates to: IRRANRLVCGHSSVTKNTCTYLL*WGLLET Trigger: CGTTTCTAACAAACCCCAGCACAGGAGATATGTACA...AGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGAATACACTGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATGGTCTAAAATCCTTCTGTACTaGTTTTACCACACAGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: FRIHCIAGRVCFSQLEWSKILLY*FYHTAL Trigger: GAGAGCTGTGTGGTAAAATCAGTACAGAAGGATTTT...AGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACAGTGTATTCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTAAAATCCTTCTGTACTaGTTTTACCACACAGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: IRRANRLVCGHSSVTKNTKILLY*FYHTAL Trigger: GAGAGCTGTGTGGTAAAATCAGTACAGAAGGATTTT...AGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAATCAAAAGTTACAAAGCAGAATACACCCTTCAGAATACACTGTATAGCAGGGCAATTTTCAGTAGCTaGGTTCACCAACCGTGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: RIKSYKAEYTLQNTLYSRAIFSS*VHQPCN Trigger: GTTACACGGTTGGTGAACTCAGCTACTGAAAATTGC...CCTGCTATACAGTGTATTCTGAAGGGTGTATTCTGCTTTGTAACTTTTGATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAATCAAAAGTTACAAAGCAGAATACACCCTTCAGAATACACTGTATAGCAGGAAAATCCTTCTGTACTaGTTTTACCACACAGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: RIKSYKAEYTLQNTLYSRKILLY*FYHTAL Trigger: GAGAGCTGTGTGGTAAAATCAGTACAGAAGGATTTT...CCTGCTATACAGTGTATTCTGAAGGGTGTATTCTGCTTTGTAACTTTTGATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAATCAAAAGTTACAAAGCAGAATACACCCTTCAGAATACACTGTATAGCAGGAGCCTTCTTTTCTTGTaGAATGCCTTTAAATCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RIKSYKAEYTLQNTLYSRSLLFL*NAFKSR Trigger: CCTGGATTTAAAGGCATTGCACAAGAAAAGAAGGCT...CCTGCTATACAGTGTATTCTGAAGGGTGTATTCTGCTTTGTAACTTTTGATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| 3UTR-3UTR CCA 90 bp | AGAATCAAAAGTTACAAAGCAGAATACACCCTTCAGAATACACTGTATAGCAGGTATGTTTTAGTCAGCTaGAATGGTCTCAGAAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: RIKSYKAEYTLQNTLYSRYVLVS*NGLRKS Trigger: GGACTTTCTGAGACCATTCCAGCTGACTAAAACATA...CCTGCTATACAGTGTATTCTGAAGGGTGTATTCTGCTTTGTAACTTTTGATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR TCA 72 bp | CCCTTTCTGCATTACTTCAGCATCACCTTGCACAGGTaGGCAGTGAGAGGCCACTGGATGCCTCTCAGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: PFLHYFSITLHR*AVRGHWMPLSR Trigger: CCTACTGAGAGGCATCCAGTGGCCTCTCACTGCTCACCTGTGCAAGGTGATGCTGAAGTAATGCAGAAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR GCA 72 bp | AAGTCGTCTGAATGGGTTTGCATGTACTCAGCAGTCTaGCTCCTCAGGGAAGCCACAGTCAGCGCACAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KSSEWVCMYSAV*LLREATVSAQS Trigger: AGACTGTGCGCTGACTGTGGCTTCCCTGAGGAGGCAGACTGCTGAGTACATGCAAACCCATTCAGACGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTTGTTAGAAGAGCAAACAGACTaGTGTGTGGGCACAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: MAGKCSARAVSPSHGTLLEEQTD*CVGTAL Trigger: CAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTC...TAACAAAGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR TCA 72 bp | TGCATTACTTCAGCATCACCTTGCACAGGTGAGCAGTaGGAGGCCACTGGATGCCTCTCAGTAGGAAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CITSASPCTGEQ*EATGCLSVGKA Trigger: AGCCTTTCCTACTGAGAGGCATCCAGTGGCCTCTCACTGCTCACCTGTGCAAGGTGATGCTGAAGTAATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCACATGGCAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTTGAAATCTTCATTTTaGGAACATAAAGCTGGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PHMAGKCSARAVSPSHGTLKSSF*EHKAGG Trigger: GCCCCCAGCTTTATGTTCCAAAAATGAAGATTTCAA...AGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTGCCATGTGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR GCA 72 bp | TGGTCTCAGAAAGTCCGTGCTCTGCTGAGCAGTCTCTaGCAGCCTGCCAGACTATTACCTGCTTTTAACATC | + |
|
Preference number: 3 (lower is better) Translates to: WSQKVRALLSSL*QPARLLPAFNI Trigger: GATGTTAAAAGCAGGTAATAGTCTGGCAGGCTGGCAGAGACTGCTCAGCAGAGCACGGACTTTCTGAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR GCA 72 bp | TTTGTTAGAAACGGCAGGAAGTCGTCTGAATGGGTTTaGATGTACTCAGCAGTCTGCCTCCTCAGGGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: FVRNGRKSSEWV*MYSAVCLLREA Trigger: GGCTTCCCTGAGGAGGCAGACTGCTGAGTACATGCAAACCCATTCAGACGACTTCCTGCCGTTTCTAACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATGGTCTCAGAAAGTCCGTGCACAAGCAGAGGTCTaGTTAGGACAGCTGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: CIAGRVCFSQLEWSQKVRAQAEV*LGQLEG Trigger: CCCCTCCAGCTGTCCTAACAAGACCTCTGCTTGTGC...ACGGACTTTCTGAGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGCGAGTGTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGCCATCCCATGGCACTTaGTTACATAAGAAGAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TSECGHGPPFLHYFSITLPSHGT*LHKKSK Trigger: TTTGCTCTTCTTATGTAACAAAGTGCCATGGGATGG...CAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCACACTCGCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGCACAGGTCCTGTAGTATCTCGATaGGTGTTTGTAAGATGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SVAMALPFCITSASPCTGPVVSR*VFVRCE Trigger: CTCACATCTTACAAACACCAATCGAGATACTACAGG...ACCTGTGCAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| 3UTR GCA 72 bp | CAGCGCACAGTCTTGTTCTCTCAGCTGATCCTCAAGTaGTCCATACATACAGTGACCATCAGATGGAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: QRTVLFSQLILK*SIHTVTIRWNL Trigger: CAGATTCCATCTGATGGTCACTGTATGTATGGAGCACTTGAGGATCAGCTGAGAGAACAAGACTGTGCGCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| 3UTR CCA 72 bp | TGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATaGTCTCAGAAAGTCCGTGCTCTGCTGAGCAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: CIAGRVCFSQLE*SQKVRALLSSL Trigger: GAGACTGCTCAGCAGAGCACGGACTTTCTGAGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR CCA 72 bp | TCCCAAACTCTTCTGGCGTGTACATATCTCCTGTGCTaGGGTTTGTTAGAAACGGCAGGAAGTCGTCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SQTLLACTYLLC*GLLETAGSRLN Trigger: ATTCAGACGACTTCCTGCCGTTTCTAACAAACCCCAGCACAGGAGATATGTACACGCCAGAAGAGTTTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGCACAGGTGAGAGGGAGATCTCCAGTTaGTTAGAAAGATTCAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: VAMALPFCITSASPCTGEREISS*LERFKT Trigger: AGTTTTGAATCTTTCTAACAAACTGGAGATCTCCCT...CTCACCTGTGCAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCCAGACTATTACCTGCTTTTAACATCATAAGCCCAGTGTTTACTCATAGAGCACAAGCAGAGGTCTaGTTAGGACAGCTGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PARLLPAFNIISPVFTHRAQAEV*LGQLEG Trigger: CCCCTCCAGCTGTCCTAACAAGACCTCTGCTTGTGC...TCTATGAGTAAACACTGGGCTTATGATGTTAAAAGCAGGTAATAGTCTGGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGAATACACTGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATGGTCTGCACAAGCAGAGGTCTaGTTAGGACAGCTGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FRIHCIAGRVCFSQLEWSAQAEV*LGQLEG Trigger: CCCCTCCAGCTGTCCTAACAAGACCTCTGCTTGTGC...AGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACAGTGTATTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR TCA 72 bp | CTGAGTAGTGTTGGGGCAAGGATACAAATTCTCAGTTaGAGAGAAACAAGGTTCAACCCTGACTCCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LSSVGARIQILS*RETRFNPDSSL Trigger: GAGGCTGGAGTCAGGGTTGAACCTTGTTTCTCTTCAACTGAGAATTTGTATCCTTGCCCCAACACTACTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR TCA 72 bp | AATCCAGGACTTGGGAGGCAGAGAGGTGAATCTTTGTaGGTACAAGATGAGCCCGGTCTACAAAGTGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: NPGLGRQRGESL*VQDEPGLQSEF Trigger: GAATTCACTTTGTAGACCGGGCTCATCTTGTACTCACAAAGATTCACCTCTCTGCCTCCCAAGTCCTGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGAATACACTGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATGGTCTGAAGAGCAAACAGACTaGTGTGTGGGCACAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: FRIHCIAGRVCFSQLEWSEEQTD*CVGTAL Trigger: CAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTC...AGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACAGTGTATTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGCTGATCCTCAAGTGCTCCATACATACAGTGACCATCAGATGGAATCTGTCTGGCTGCCAATATTaGAGCAAGTTTTTCACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SQLILKCSIHTVTIRWNLSGCQY*SKFFTL Trigger: GAGAGTGAAAAACTTGCTCAAATATTGGCAGCCAGA...CAGATTCCATCTGATGGTCACTGTATGTATGGAGCACTTGAGGATCAGCTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| 3UTR TCA 72 bp | GTAACACGAGTCATTCCGCATAAAATCCTTCTGTACTaGTTTTACCACACAGCTCTCTGCTTCTGCCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: VTRVIPHKILLY*FYHTALCFCHL Trigger: AAGGTGGCAGAAGCAGAGAGCTGTGTGGTAAAATCAGTACAGAAGGATTTTATGCGGAATGACTCGTGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTTCTCGACCATCCCATGGCACTTaGTTACATAAGAAGAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: RANRLVCGHSSVTKNTSRPSHGT*LHKKSK Trigger: TTTGCTCTTCTTATGTAACAAAGTGCCATGGGATGG...TCGAGAAGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATGGTCTCAGAAAGTCCGTTTGAAATCTTCATTTTaGGAACATAAAGCTGGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: CIAGRVCFSQLEWSQKVRLKSSF*EHKAGG Trigger: GCCCCCAGCTTTATGTTCCAAAAATGAAGATTTCAA...ACGGACTTTCTGAGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTTTGAAATCTTCATTTTaGGAACATAAAGCTGGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: IRRANRLVCGHSSVTKNTLKSSF*EHKAGG Trigger: GCCCCCAGCTTTATGTTCCAAAAATGAAGATTTCAA...AGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACCCTTCAGAATACACTGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAAAGGGAGATCTCCAGTTaGTTAGAAAGATTCAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: TPFRIHCIAGRVCFSQLEREISS*LERFKT Trigger: AGTTTTGAATCTTTCTAACAAACTGGAGATCTCCCT...TTCCAGCTGACTAAAACATACTCTGCCTGCTATACAGTGTATTCTGAAGGGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR CCA 72 bp | CCAATATTTGAGCAAGTTTTTCACTCTCAAGATGTCTaGCTCCAGATAAGTTCTCAATTTCAGCCTCTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PIFEQVFHSQDV*LQISSQFQPLL Trigger: TAGCAGAGGCTGAAATTGAGAACTTATCTGGAGCCAGACATCTTGAGAGTGAAAAACTTGCTCAAATATTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| 3UTR TCA 72 bp | ATCTGTTTAATTTCCAATTCTCTGGCTGCCAATATTTaGGCAAGTTTTTCACTCTCAAGATGTCTGGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ICLISNSLAANI*ASFSLSRCLAP Trigger: TGGAGCCAGACATCTTGAGAGTGAAAAACTTGCTCAAATATTGGCAGCCAGAGAATTGGAAATTAAACAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| 3UTR CCA 72 bp | ATCATAAGCCCAGTGTTTACTCATAGACAGTATACATaGGTCAAAAGCCCAGATATTATACACATGATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: IISPVFTHRQYT*VKSPDIIHMML Trigger: GAGCATCATGTGTATAATATCTGGGCTTTTGACCCATGTATACTGTCTATGAGTAAACACTGGGCTTATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR TCA 72 bp | TTATTTAACAAAATAATGTGTAGCCAGGGTTTTCATTaGATCCTAGAAAGTGAGCACAAGCAGAGGTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LFNKIMCSQGFH*ILESEHKQRSC Trigger: ACAAGACCTCTGCTTGTGCTCACTTTCTAGGATTCAATGAAAACCCTGGCTACACATTATTTTGTTAAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | CCTCACATGGCAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTACATCTTCCGTGAGCTaGTTCCTCCTCTTTTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PHMAGKCSARAVSPSHGTTSSVS*FLLFLS Trigger: CGACAAAAAGAGGAGGAAGCAGCTCACGGAAGATGT...AGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTGCCATGTGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR CAA 72 bp | CTGCCTCCTCAGGGAAGCCACAGTCAGCGCACAGTCTaGTTCTCTCAGCTGATCCTCAAGTGCTCCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: LPPQGSHSQRTV*FSQLILKCSIH Trigger: ATGTATGGAGCACTTGAGGATCAGCTGAGAGAACAAGACTGTGCGCTGACTGTGGCTTCCCTGAGGAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| CDS-3UTR GCA 90 bp | ATGGCAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTTGTTATTCTTCTCCTTCCGATaGCTTCTCACCAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MAGKCSARAVSPSHGTLLFFSFR*LLTSCS Trigger: GGAGCAGCTGGTGAGAAGGCATCGGAAGGAGAAGAA...TAACAAAGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| CDS-3UTR CCA 90 bp | CCTCACATGGCAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTACATATCTCCTGTGCTaGGGTTTGTTAGAAACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHMAGKCSARAVSPSHGTTYLLC*GLLETA Trigger: TGCCGTTTCTAACAAACCCCAGCACAGGAGATATGT...AGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTGCCATGTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR TCA 90 bp | CCTCACATGGCAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTGAAATCCGAGGTGGTTaGTTCTCAAGTACCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHMAGKCSARAVSPSHGTEIRGG*FSSTKF Trigger: AAACTTGGTACTTGAGAATCAACCACCTCGGATTTC...AGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTGCCATGTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| CDS-3UTR TCA 90 bp | CCTCACATGGCAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTCTCTTTTGTGCTTTTaGAATCCGAGGTGGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: PHMAGKCSARAVSPSHGTSLLCF*NPRWLI Trigger: AATCAACCACCTCGGATTTCAAAAGCACAAAAGAGA...AGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTGCCATGTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTTGTTACATACCGCTCCTTTTCCAATaGAGCCTTCTTTTCCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QASALLELCPHPMALCYIPLLFQ*SLLFPS Trigger: AGACGGGAAAAGAAGGCTGCATTGGAAAAGGAGCGG...TATGTAACAAAGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | ATGGCAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTTGTTACTCAATTTCAGCCTCTaGTATCCTTTCTTCCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MAGKCSARAVSPSHGTLLLNFSL*YPFFPL Trigger: GAGCGGGAAGAAAGGATAGCAGAGGCTGAAATTGAG...TAACAAAGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGCGAGTGTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGTCGTCTGAATGGGTTTaGATGTACTCAGCAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSECGHGPPFLHYFSITLSSEWV*MYSAVC Trigger: GCAGACTGCTGAGTACATGCAAACCCATTCAGACGA...CAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCACACTCGCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | ATGGCAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTTGTTATCGTCTGAATGGGTTTaGATGTACTCAGCAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MAGKCSARAVSPSHGTLLSSEWV*MYSAVC Trigger: GCAGACTGCTGAGTACATGCAAACCCATTCAGACGA...TAACAAAGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGCACAGGTGAGCTGGCTGCCAATATTTaGGCAAGTTTTTCACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VAMALPFCITSASPCTGELAANI*ASFSLS Trigger: TGAGAGTGAAAAACTTGCTCAAATATTGGCAGCCAG...CTCACCTGTGCAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR TCA 90 bp | ATGGCAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTTGTTACTGGCTGCCAATATTTaGGCAAGTTTTTCACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MAGKCSARAVSPSHGTLLLAANI*ASFSLS Trigger: TGAGAGTGAAAAACTTGCTCAAATATTGGCAGCCAG...TAACAAAGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTTGTTACATAGCTCCATACATACAGTaGCCATCAGATGGAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QASALLELCPHPMALCYIAPYIQ*PSDGIC Trigger: ACAGATTCCATCTGATGGTCACTGTATGTATGGAGC...TATGTAACAAAGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTAAGATGTGAGACAAAGCTCTTAGCTCGAGCTGACCGCCCCATGCCGCTGGTCAATTGCTTCAATTaGTCCAGTTCTTCCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FVRCETKLLARADRPMPLVNCFN*SSSSLC Trigger: ACACAGGGAAGAACTGGAGCAATTGAAGCAATTGAC...CAGCGGCATGGGGCGGTCAGCTCGAGCTAAGAGCTTTGTCTCACATCTTACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| CDS-3UTR CCA 90 bp | AGTGTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGCACAGGTTCATTCCCTGAATTTTaGCTTGCAGCTCCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVAMALPFCITSASPCTGSFPEF*LAAPSS Trigger: AGAAGAAGGAGCTGCAAGCCAAAATTCAGGGAATGA...ACCTGTGCAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR CAA 72 bp | TGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTaGTTACATAAGAAGAGCAAACAGACTTGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSARAVSPSHGT*LHKKSKQTCVW Trigger: CCACACACAAGTCTGTTTGCTCTTCTTATGTAACAAAGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| 3UTR CAA 72 bp | ACTCTTCTGGCGTGTACATATCTCCTGTGCTGGGGTTaGTTAGAAACGGCAGGAAGTCGTCTGAATGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLLACTYLLCWG*LETAGSRLNGF Trigger: AAACCCATTCAGACGACTTCCTGCCGTTTCTAACAAACCCCAGCACAGGAGATATGTACACGCCAGAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| CDS-3UTR TCA 90 bp | AGTGTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGCACAGGTTCTCTTTTGTGCTTTTaGAATCCGAGGTGGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SVAMALPFCITSASPCTGSLLCF*NPRWLI Trigger: AATCAACCACCTCGGATTTCAAAAGCACAAAAGAGA...ACCTGTGCAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTTCTCGATTCTTCTCCTTCCGATaGCTTCTCACCAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RANRLVCGHSSVTKNTSRFFSFR*LLTSCS Trigger: GGAGCAGCTGGTGAGAAGGCATCGGAAGGAGAAGAA...TCGAGAAGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | GTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGCACAGGTGAGTCCTTGAAAGTCAATTaGTTCAATTGCTCCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VAMALPFCITSASPCTGESLKVN*FNCSSS Trigger: AGAACTGGAGCAATTGAAGCAATTGACTTTCAAGGA...CTCACCTGTGCAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | TGTACTGATTTTACCACACAGCTCTCTGCTTCTGCCACCTTCAACTCTTGCTATATGTACTCAGCAGTCTaGCTCCTCAGGGAAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CTDFTTQLSASATFNSCYMYSAV*LLREAT Trigger: TGTGGCTTCCCTGAGGAGGCAGACTGCTGAGTACAT...ATAGCAAGAGTTGAAGGTGGCAGAAGCAGAGAGCTGTGTGGTAAAATCAGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTTGTTACATATCATTCCCTGAATTTTaGCTTGCAGCTCCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QASALLELCPHPMALCYISFPEF*LAAPSS Trigger: AGAAGAAGGAGCTGCAAGCCAAAATTCAGGGAATGA...TATGTAACAAAGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| CDS-3UTR TCA 90 bp | TTTGTAAGATGTGAGACAAAGCTCTTAGCTCGAGCTGACCGCCCCATGCCGCTGCTCAAGTACCAAGTTTaGAATGTTAACAGCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FVRCETKLLARADRPMPLLKYQV*NVNSNR Trigger: TCTGTTGCTGTTAACATTTCAAACTTGGTACTTGAG...CAGCGGCATGGGGCGGTCAGCTCGAGCTAAGAGCTTTGTCTCACATCTTACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| CDS-3UTR GCA 90 bp | TGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATGGTCTCAGAAAGTCCGTCCGCTCCTTTTCCAATaGAGCCTTCTTTTCCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CIAGRVCFSQLEWSQKVRPLLFQ*SLLFPS Trigger: AGACGGGAAAAGAAGGCTGCATTGGAAAAGGAGCGG...ACGGACTTTCTGAGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTTGTTACATACTCAAGTACCAAGTTTaGAATGTTAACAGCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QASALLELCPHPMALCYILKYQV*NVNSNR Trigger: TCTGTTGCTGTTAACATTTCAAACTTGGTACTTGAG...TATGTAACAAAGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTTGTTAACAGTGACCATCAGATaGAATCTGTTTAATTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: MAGKCSARAVSPSHGTLLTVTIR*NLFNFQ Trigger: TTGGAAATTAAACAGATTCCATCTGATGGTCACTGT...TAACAAAGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR TCA 90 bp | ACACCCTTCAGAATACACTGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATCTTGTTCTCTCAGCTaGTCCTCAAGTGCTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: TPFRIHCIAGRVCFSQLESCSLS*SSSAPY Trigger: GTATGGAGCACTTGAGGATCAGCTGAGAGAACAAGA...TTCCAGCTGACTAAAACATACTCTGCCTGCTATACAGTGTATTCTGAAGGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTTCTCGAGAAATCCGAGGTGGTTaGTTCTCAAGTACCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RANRLVCGHSSVTKNTSREIRGG*FSSTKF Trigger: AAACTTGGTACTTGAGAATCAACCACCTCGGATTTC...TCGAGAAGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | TTACATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAAACATCTTCCGTGAGCTaGTTCCTCCTCTTTTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LHKKSKQTCVWAQLCYKETSSVS*FLLFLS Trigger: CGACAAAAAGAGGAGGAAGCAGCTCACGGAAGATGT...TTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTATGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | TGTACTGATTTTACCACACAGCTCTCTGCTTCTGCCACCTTCAACTCTTGCTATGTCAATTGCTTCAATTaGTCCAGTTCTTCCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CTDFTTQLSASATFNSCYVNCFN*SSSSLC Trigger: ACACAGGGAAGAACTGGAGCAATTGAAGCAATTGAC...ATAGCAAGAGTTGAAGGTGGCAGAAGCAGAGAGCTGTGTGGTAAAATCAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTTCTCGATGTACATATCTCCTGTaGTGGGGTTTGTTAGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: RANRLVCGHSSVTKNTSRCTYLL*WGLLET Trigger: CGTTTCTAACAAACCCCAGCACAGGAGATATGTACA...TCGAGAAGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTGCAATTTTCAGTAGCTaGGTTCACCAACCGTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: IRRANRLVCGHSSVTKNTAIFSS*VHQPCN Trigger: GTTACACGGTTGGTGAACTCAGCTACTGAAAATTGC...AGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCCAGACTATTACCTGCTTTTAACATCATAAGCCCAGTGTTTACTCATAGAACATATCTCCTGTGCTaGGGTTTGTTAGAAACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PARLLPAFNIISPVFTHRTYLLC*GLLETA Trigger: TGCCGTTTCTAACAAACCCCAGCACAGGAGATATGT...TCTATGAGTAAACACTGGGCTTATGATGTTAAAAGCAGGTAATAGTCTGGCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTAGCTGTGTTCTTCAGTAGCATTTACAACAATCTAGCACTTGGTAGATTGGCTCCATACATACAGTaGCCATCAGATGGAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KVAVFFSSIYNNLALGRLAPYIQ*PSDGIC Trigger: ACAGATTCCATCTGATGGTCACTGTATGTATGGAGC...CAATCTACCAAGTGCTAGATTGTTGTAAATGCTACTGAAGAACACAGCTACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | ATATTTGAGCAAGTTTTTCACTCTCAAGATGTCTGGCTCCAGATAAGTTCTCAAACATCTTCCGTGAGCTaGTTCCTCCTCTTTTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: IFEQVFHSQDVWLQISSQTSSVS*FLLFLS Trigger: CGACAAAAAGAGGAGGAAGCAGCTCACGGAAGATGT...TTGAGAACTTATCTGGAGCCAGACATCTTGAGAGTGAAAAACTTGCTCAAATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTTCTCGATCTTCCCTGTGTTTTTaGTCCATTTCTCTTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RANRLVCGHSSVTKNTSRSSLCF*SISLSN Trigger: ATTGGAAAGAGAAATGGAGCAAAAACACAGGGAAGA...TCGAGAAGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | AGAATCAAAAGTTACAAAGCAGAATACACCCTTCAGAATACACTGTATAGCAGGCTCAATTTCAGCCTCTaGTATCCTTTCTTCCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RIKSYKAEYTLQNTLYSRLNFSL*YPFFPL Trigger: GAGCGGGAAGAAAGGATAGCAGAGGCTGAAATTGAG...CCTGCTATACAGTGTATTCTGAAGGGTGTATTCTGCTTTGTAACTTTTGATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCCAGACTATTACCTGCTTTTAACATCATAAGCCCAGTGTTTACTCATAGATGTACATATCTCCTGTaGTGGGGTTTGTTAGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: PARLLPAFNIISPVFTHRCTYLL*WGLLET Trigger: CGTTTCTAACAAACCCCAGCACAGGAGATATGTACA...TCTATGAGTAAACACTGGGCTTATGATGTTAAAAGCAGGTAATAGTCTGGCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
||
| CDS-3UTR CCA 90 bp | AAGGTAGCTGTGTTCTTCAGTAGCATTTACAACAATCTAGCACTTGGTAGATTGTCATTCCCTGAATTTTaGCTTGCAGCTCCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVAVFFSSIYNNLALGRLSFPEF*LAAPSS Trigger: AGAAGAAGGAGCTGCAAGCCAAAATTCAGGGAATGA...CAATCTACCAAGTGCTAGATTGTTGTAAATGCTACTGAAGAACACAGCTACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| CDS-3UTR TCA 90 bp | CCTGCCAGACTATTACCTGCTTTTAACATCATAAGCCCAGTGTTTACTCATAGACTCAAGTACCAAGTTTaGAATGTTAACAGCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PARLLPAFNIISPVFTHRLKYQV*NVNSNR Trigger: TCTGTTGCTGTTAACATTTCAAACTTGGTACTTGAG...TCTATGAGTAAACACTGGGCTTATGATGTTAAAAGCAGGTAATAGTCTGGCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCCAGACTATTACCTGCTTTTAACATCATAAGCCCAGTGTTTACTCATAGATCTTCCCTGTGTTTTTaGTCCATTTCTCTTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PARLLPAFNIISPVFTHRSSLCF*SISLSN Trigger: ATTGGAAAGAGAAATGGAGCAAAAACACAGGGAAGA...TCTATGAGTAAACACTGGGCTTATGATGTTAAAAGCAGGTAATAGTCTGGCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR GCA 90 bp | ATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTTCCTTGAAAGTCAATTaGTTCAATTGCTCCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRRANRLVCGHSSVTKNTSLKVN*FNCSSS Trigger: AGAACTGGAGCAATTGAAGCAATTGACTTTCAAGGA...AGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR GCA 90 bp | CCTGCCAGACTATTACCTGCTTTTAACATCATAAGCCCAGTGTTTACTCATAGATCCTTGAAAGTCAATTaGTTCAATTGCTCCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PARLLPAFNIISPVFTHRSLKVN*FNCSSS Trigger: AGAACTGGAGCAATTGAAGCAATTGACTTTCAAGGA...TCTATGAGTAAACACTGGGCTTATGATGTTAAAAGCAGGTAATAGTCTGGCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR CCA 90 bp | ACACCCTTCAGAATACACTGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAAACAGTGACCATCAGATaGAATCTGTTTAATTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TPFRIHCIAGRVCFSQLETVTIR*NLFNFQ Trigger: TTGGAAATTAAACAGATTCCATCTGATGGTCACTGT...TTCCAGCTGACTAAAACATACTCTGCCTGCTATACAGTGTATTCTGAAGGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
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| 3UTR CAA 72 bp | AATCTGTTTAATTTCCAATTCTCTGGCTGCCAATATTaGAGCAAGTTTTTCACTCTCAAGATGTCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLFNFQFSGCQY*SKFFTLKMSGS Trigger: GGAGCCAGACATCTTGAGAGTGAAAAACTTGCTCAAATATTGGCAGCCAGAGAATTGGAAATTAAACAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
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| CDS-3UTR TCA 90 bp | AGAATCAAAAGTTACAAAGCAGAATACACCCTTCAGAATACACTGTATAGCAGGTCTCTTTTGTGCTTTTaGAATCCGAGGTGGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: RIKSYKAEYTLQNTLYSRSLLCF*NPRWLI Trigger: AATCAACCACCTCGGATTTCAAAAGCACAAAAGAGA...CCTGCTATACAGTGTATTCTGAAGGGTGTATTCTGCTTTGTAACTTTTGATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| 3UTR CAA 72 bp | AGGAAGCTACACATACATAAAAGGGAGATCTCCAGTTaGTTAGAAAGATTCAAAACTGACACAATTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: RKLHIHKREISS*LERFKTDTINT Trigger: GGTGTTAATTGTGTCAGTTTTGAATCTTTCTAACAAACTGGAGATCTCCCTTTTATGTATGTGTAGCTTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS TCA 90 bp | AGCCACGACCTCCTCCATGACGACCAGGCGGCCCGGCACCCGCGCTaGAGGAGATCCGCACCTCAGGAGGGCCAGCACCTCCCACTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SHDLLHDDQAARHPR*RRSAPQEGQHLPLL Trigger: GAGGAGTGGGAGGTGCTGGCCCTCCTGAGGTGCGGATCTCCTTCAGCGCGGGTGCCGGGCCGCCTGGTCGTCATGGAGGAGGTCGTGGCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | GTGGCCATGGCCCTCCCTTTCTGCATTACTTCAGCATCACCTTGCACAGGTGAGTGCTTCCTCCTCTTTTaGTCGTTTTTGGGAACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: VAMALPFCITSASPCTGECFLLF*SFLGTA Trigger: CGCTGTTCCCAAAAACGACAAAAAGAGGAGGAAGCA...CTCACCTGTGCAAGGTGATGCTGAAGTAATGCAGAAAGGGAGGGCCATGGCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | ATGGCAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTTGTTATCCCTGAATTTTGGCTaGCAGCTCCTTCTTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: MAGKCSARAVSPSHGTLLSLNFG*QLLLLL Trigger: AAGGAGAAGAAGGAGCTGCAAGCCAAAATTCAGGGA...TAACAAAGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | ACCGCCCCATGCCGCTGTGTTCACAATATCGTCACAGTACTTCCCAAACTCTTCTGCTTCCTCCTCTTTTaGTCGTTTTTGGGAACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TAPCRCVHNIVTVLPKLFCFLLF*SFLGTA Trigger: CGCTGTTCCCAAAAACGACAAAAAGAGGAGGAAGCA...GAAGAGTTTGGGAAGTACTGTGACGATATTGTGAACACAGCGGCATGGGGCGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
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| CDS-3UTR CAA 90 bp | ATGGCAGGCAAGTGCTCTGCTAGAGCTGTGTCCCCATCCCATGGCACTTTGTTAGTCTCTTTTGTGCTTTaGAAATCCGAGGTGGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: MAGKCSARAVSPSHGTLLVSFVL*KSEVVD Trigger: ATCAACCACCTCGGATTTCAAAAGCACAAAAGAGAC...TAACAAAGTGCCATGGGATGGGGACACAGCTCTAGCAGAGCACTTGCCTGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | ACCGCCCCATGCCGCTGTGTTCACAATATCGTCACAGTACTTCCCAAACTCTTCCTCTTTTTGTCGTTTTaGGGAACAGCGTTCTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: TAPCRCVHNIVTVLPKLFLFLSF*GTAFFI Trigger: AATGAAGAACGCTGTTCCCAAAAACGACAAAAAGAG...GAAGAGTTTGGGAAGTACTGTGACGATATTGTGAACACAGCGGCATGGGGCGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
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| CDS-3UTR CAA 90 bp | TGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATGGTCTCAGAAAGTCCGTTCCCTGAATTTTGGCTaGCAGCTCCTTCTTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CIAGRVCFSQLEWSQKVRSLNFG*QLLLLL Trigger: AAGGAGAAGAAGGAGCTGCAAGCCAAAATTCAGGGA...ACGGACTTTCTGAGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | CATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTCCCTGAATTTTGGCTaGCAGCTCCTTCTTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HKKSKQTCVWAQLCYKEYSLNFG*QLLLLL Trigger: AAGGAGAAGAAGGAGCTGCAAGCCAAAATTCAGGGA...GTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | AGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTTCTCGAAGTCAATTGCTTCAATaGCTCCAGTTCTTCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RANRLVCGHSSVTKNTSRSQLLQ*LQFFPV Trigger: CACAGGGAAGAACTGGAGCAATTGAAGCAATTGACT...TCGAGAAGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | ACACCCTTCAGAATACACTGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAAAGTCAATTGCTTCAATaGCTCCAGTTCTTCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TPFRIHCIAGRVCFSQLESQLLQ*LQFFPV Trigger: CACAGGGAAGAACTGGAGCAATTGAAGCAATTGACT...TTCCAGCTGACTAAAACATACTCTGCCTGCTATACAGTGTATTCTGAAGGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | TGTACTGATTTTACCACACAGCTCTCTGCTTCTGCCACCTTCAACTCTTGCTATGTCCTTGAAAGTCAATaGCTTCAATTGCTCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CTDFTTQLSASATFNSCYVLESQ*LQLLQF Trigger: GAACTGGAGCAATTGAAGCAATTGACTTTCAAGGAC...ATAGCAAGAGTTGAAGGTGGCAGAAGCAGAGAGCTGTGTGGTAAAATCAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | CTGGGATCACCAGCACTTTATAAGGCTGATAAAGCTGCTGTCACGACAATATGTCCTGTAGTATCTCGATaGGTGTTTGTAAGATGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGSPALYKADKAAVTTICPVVSR*VFVRCE Trigger: CTCACATCTTACAAACACCAATCGAGATACTACAGG...ACATATTGTCGTGACAGCAGCTTTATCAGCCTTATAAAGTGCTGGTGATCCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | TGTACTGATTTTACCACACAGCTCTCTGCTTCTGCCACCTTCAACTCTTGCTATCCTGTAGTATCTCGATaGGTGTTTGTAAGATGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CTDFTTQLSASATFNSCYPVVSR*VFVRCE Trigger: CTCACATCTTACAAACACCAATCGAGATACTACAGG...ATAGCAAGAGTTGAAGGTGGCAGAAGCAGAGAGCTGTGTGGTAAAATCAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | CTGGGATCACCAGCACTTTATAAGGCTGATAAAGCTGCTGTCACGACAATATGTCTCTTTTTGTCGTTTTaGGGAACAGCGTTCTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LGSPALYKADKAAVTTICLFLSF*GTAFFI Trigger: AATGAAGAACGCTGTTCCCAAAAACGACAAAAAGAG...ACATATTGTCGTGACAGCAGCTTTATCAGCCTTATAAAGTGCTGGTGATCCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | CATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACGTCCTTGAAAGTCAATaGCTTCAATTGCTCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HKKSKQTCVWAQLCYKEYVLESQ*LQLLQF Trigger: GAACTGGAGCAATTGAAGCAATTGACTTTCAAGGAC...GTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | CATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACGTCTCTTTTGTGCTTTaGAAATCCGAGGTGGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HKKSKQTCVWAQLCYKEYVSFVL*KSEVVD Trigger: ATCAACCACCTCGGATTTCAAAAGCACAAAAGAGAC...GTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | AGAATCAAAAGTTACAAAGCAGAATACACCCTTCAGAATACACTGTATAGCAGGTGCTTCCTCCTCTTTTaGTCGTTTTTGGGAACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RIKSYKAEYTLQNTLYSRCFLLF*SFLGTA Trigger: CGCTGTTCCCAAAAACGACAAAAAGAGGAGGAAGCA...CCTGCTATACAGTGTATTCTGAAGGGTGTATTCTGCTTTGTAACTTTTGATTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | TTCAGAATACACTGTATAGCAGGCAGAGTATGTTTTAGTCAGCTGGAATGGTCTGTCCTTGAAAGTCAATaGCTTCAATTGCTCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FRIHCIAGRVCFSQLEWSVLESQ*LQLLQF Trigger: GAACTGGAGCAATTGAAGCAATTGACTTTCAAGGAC...AGACCATTCCAGCTGACTAAAACATACTCTGCCTGCTATACAGTGTATTCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | ATAAGAAGAGCAAACAGACTTGTGTGTGGGCACAGCTCTGTTACAAAGAATACTTCTGGCTGCCAATATTaGAGCAAGTTTTTCACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IRRANRLVCGHSSVTKNTSGCQY*SKFFTL Trigger: GAGAGTGAAAAACTTGCTCAAATATTGGCAGCCAGA...AGTATTCTTTGTAACAGAGCTGTGCCCACACACAAGTCTGTTTGCTCTTCTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | AGAATCAAAAGTTACAAAGCAGAATACACCCTTCAGAATACACTGTATAGCAGGAGTCAATTGCTTCAATaGCTCCAGTTCTTCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RIKSYKAEYTLQNTLYSRSQLLQ*LQFFPV Trigger: CACAGGGAAGAACTGGAGCAATTGAAGCAATTGACT...CCTGCTATACAGTGTATTCTGAAGGGTGTATTCTGCTTTGTAACTTTTGATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | AAGGTAGCTGTGTTCTTCAGTAGCATTTACAACAATCTAGCACTTGGTAGATTGTCTGGCTGCCAATATTaGAGCAAGTTTTTCACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KVAVFFSSIYNNLALGRLSGCQY*SKFFTL Trigger: GAGAGTGAAAAACTTGCTCAAATATTGGCAGCCAGA...CAATCTACCAAGTGCTAGATTGTTGTAAATGCTACTGAAGAACACAGCTACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
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| CDS-3UTR CAA 90 bp | ATATTTGAGCAAGTTTTTCACTCTCAAGATGTCTGGCTCCAGATAAGTTCTCAAGTCTCTTTTGTGCTTTaGAAATCCGAGGTGGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: IFEQVFHSQDVWLQISSQVSFVL*KSEVVD Trigger: ATCAACCACCTCGGATTTCAAAAGCACAAAAGAGAC...TTGAGAACTTATCTGGAGCCAGACATCTTGAGAGTGAAAAACTTGCTCAAATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151012.3 |
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| CDS TCA 72 bp | CTCCTCCATGACGACCAGGCGGCCCGGCACCCGCGCTaGAGGAGATCCGCACCTCAGGAGGGCCAGCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLHDDQAARHPR*RRSAPQEGQHL Trigger: GAGGTGCTGGCCCTCCTGAGGTGCGGATCTCCTTCAGCGCGGGTGCCGGGCCGCCTGGTCGTCATGGAGGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236953.2 |
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| CDS GCA 72 bp | AGCTCCTTCTTCTCCTTCCGATGCCTTCTCACCAGCTaGTCCTCATCATCGAGCTCTTCAGCCACGACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSFFSFRCLLTS*SSSSSSSATTS Trigger: GGAGGTCGTGGCTGAAGAGCTCGATGATGAGGAGCAGCTGGTGAGAAGGCATCGGAAGGAGAAGAAGGAGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS CAA 72 bp | CCAATGCAGCCTTCTTTTCCCGTCTCTTTTGTGCTTTaGAAATCCGAGGTGGTTGATTCTCAAGTACCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PMQPSFPVSFVL*KSEVVDSQVPS Trigger: ACTTGGTACTTGAGAATCAACCACCTCGGATTTCAAAAGCACAAAAGAGACGGGAAAAGAAGGCTGCATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117268.9 ENSMUST00000236953.2 |
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| CDS GCA 72 bp | ATTTCTCTTTCCAATTTAGCAACATCTTCCGTGAGCTaGTTCCTCCTCTTTTTGTCGTTTTTGGGAACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ISLSNLATSSVS*FLLFLSFLGTA Trigger: CGCTGTTCCCAAAAACGACAAAAAGAGGAGGAAGCAGCTCACGGAAGATGTTGCTAAATTGGAAAGAGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS CAA 90 bp | CTTGAAAGTCAATTGCTTCAATTGCTCCAGTTCTTCCCTGTGTTTTaGCTCCATTTCTCTTTCCAATTTAGCAACATCTTCCGTGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LESQLLQLLQFFPVF*LHFSFQFSNIFREL Trigger: CAGCTCACGGAAGATGTTGCTAAATTGGAAAGAGAAATGGAGCAAAAACACAGGGAAGAACTGGAGCAATTGAAGCAATTGACTTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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| CDS CAA 72 bp | ATCTATCTTACTGTCCTTGAAAGTCAATTGCTTCAATaGCTCCAGTTCTTCCCTGTGTTTTTGCTCCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: IYLTVLESQLLQ*LQFFPVFLLHF Trigger: GAAATGGAGCAAAAACACAGGGAAGAACTGGAGCAATTGAAGCAATTGACTTTCAAGGACAGTAAGATAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117268.9 ENSMUST00000151012.3 ENSMUST00000236953.2 |
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