Pregenerated sensors for OTUD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036990Ensembl transcript IDs: ENSMUST00000173078.8, ENSMUST00000173286.8
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAAGGAGTGCGTGGGACAATGGAGGATGTCTGAGAGGAATAACTTaGACAGCAAGAACACTGAAAGGAGCAGAGGTGGGGCCCACTCCA | + |
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Preference number: 1 (lower is better) Translates to: PRSAWDNGGCLRGIT*TARTLKGAEVGPTP Trigger: TGGAGTGGGCCCCACCTCTGCTCCTTTCAGTGTTCTTGCTGTTCAAGTTATTCCTCTCAGACATCCTCCATTGTCCCACGCACTCCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR GCA 90 bp | AAACAAAGTGCCACAGGCTACAATTCTTTCATCACTGATCCATCATaGCCTGCAGGTCAGGTAGGAAAACAGAAGTTGATTGGCTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: KQSATGYNSFITDPS*PAGQVGKQKLIGFP Trigger: AGGGAAGCCAATCAACTTCTGTTTTCCTACCTGACCTGCAGGGCATGATGGATCAGTGATGAAAGAATTGTAGCCTGTGGCACTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR CAA 90 bp | GCCAAGGAGTGCGTGGGACAATGGAGGATGTCTGAGAGGAATAACTaGAACAGCAAGAACACTGAAAGGAGCAGAGGTGGGGCCCACTCC | + |
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Preference number: 2 (lower is better) Translates to: AKECVGQWRMSERNN*NSKNTERSRGGAHS Trigger: GGAGTGGGCCCCACCTCTGCTCCTTTCAGTGTTCTTGCTGTTCAAGTTATTCCTCTCAGACATCCTCCATTGTCCCACGCACTCCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR-3UTR CCA 90 bp | CCATCATGCCCTGCAGGTCAGGTAGGAAAACAGAAGTTGATTGGCTTCCCTCAGGTGAATACTGCAGACTaGAAGAAGCAGGACTACACA | + |
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Preference number: 2 (lower is better) Translates to: PSCPAGQVGKQKLIGFPQVNTAD*KKQDYT Trigger: TGTGTAGTCCTGCTTCTTCCAGTCTGCAGTATTCAC...CTGAGGGAAGCCAATCAACTTCTGTTTTCCTACCTGACCTGCAGGGCATGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR-3UTR TCA 90 bp | GACTTCATGAGCCTAGCTGACAGCCAAACACCCCAAATTATCAGAGGACCCAGAAATTCATCTGCCCCTTaGATTCATGTCCAAAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: DFMSLADSQTPQIIRGPRNSSAP*IHVQSV Trigger: GACACTTTGGACATGAATTCAAGGGGCAGATGAATT...TCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTCAGCTAGGCTCATGAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR-3UTR TCA 90 bp | TACTGTCAAGCCACTAAGGTAAGACAGAATGACCATGAGGACACCAAGCGCTATAGTCCAACCTCCAAATaGGAACAGAGTGCAACATGC | + |
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Preference number: 2 (lower is better) Translates to: YCQATKVRQNDHEDTKRYSPTSK*EQSATC Trigger: GCATGTTGCACTCTGTTCTCATTTGGAGGTTGGACT...ATAGCGCTTGGTGTCCTCATGGTCATTCTGTCTTACCTTAGTGGCTTGACAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR-3UTR CCA 90 bp | GACTTCATGAGCCTAGCTGACAGCCAAACACCCCAAATTATCAGAGGACCCAGAAGCCACATCTATTTCTaGCTAGGTATATCACACACA | + |
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Preference number: 2 (lower is better) Translates to: DFMSLADSQTPQIIRGPRSHIYF*LGISHT Trigger: TGTGTGTGATATACCTAGCCAGAAATAGATGTGGCT...TCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTCAGCTAGGCTCATGAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTTTGTAATTCATCTGCCCCTTaGATTCATGTCCAAAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: AKHPKLSEDPEHLSASVCNSSAP*IHVQSV Trigger: GACACTTTGGACATGAATTCAAGGGGCAGATGAATT...ACAAACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTTTGTCCAGCTATGACAAGTTaGACATGCAACTGTAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: AKHPKLSEDPEHLSASVCPAMTS*TCNCKV Trigger: CACTTTACAGTTGCATGTTCAACTTGTCATAGCTGG...ACAAACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR-3UTR GCA 90 bp | GACAGCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTACACTACTTACTATTTaGATAGCACTCAAGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: DSQTPQIIRGPRTLVCFSTLLTI*IALKLP Trigger: AGGCAGCTTGAGTGCTATGCAAATAGTAAGTAGTGT...ACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR-3UTR TCA 90 bp | CTATTTCTGGCTAGGTATATCACACACAACATGCAAAGAAAAATCACCACTACACCAGCTATGACAAGTTaGACATGCAACTGTAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LFLARYITHNMQRKITTTPAMTS*TCNCKV Trigger: CACTTTACAGTTGCATGTTCAACTTGTCATAGCTGG...TGTAGTGGTGATTTTTCTTTGCATGTTGTGTGTGATATACCTAGCCAGAAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR-3UTR CCA 90 bp | AAATACAGAGTACAGTTAGTTTTACAAAGTGACACAGATGAGAGAATACTGTGCGTGAATACTGCAGACTaGAAGAAGCAGGACTACACA | + |
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Preference number: 2 (lower is better) Translates to: KYRVQLVLQSDTDERILCVNTAD*KKQDYT Trigger: TGTGTAGTCCTGCTTCTTCCAGTCTGCAGTATTCAC...GCACAGTATTCTCTCATCTGTGTCACTTTGTAAAACTAACTGTACTCTGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR GCA 72 bp | TACAGGAAACATGAGGGTCACAAGCTGCCAGCATTCTaGTGCCAAGGAGTGCGTGGGACAATGGAGGATGTC | + |
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Preference number: 3 (lower is better) Translates to: YRKHEGHKLPAF*CQGVRGTMEDV Trigger: GACATCCTCCATTGTCCCACGCACTCCTTGGCAGCAGAATGCTGGCAGCTTGTGACCCTCATGTTTCCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR TCA 72 bp | GCGTGGGACAATGGAGGATGTCTGAGAGGAATAACTTaGACAGCAAGAACACTGAAAGGAGCAGAGGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: AWDNGGCLRGIT*TARTLKGAEVG Trigger: CCCCACCTCTGCTCCTTTCAGTGTTCTTGCTGTTCAAGTTATTCCTCTCAGACATCCTCCATTGTCCCACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR GCA 72 bp | AGTTTGCATCACATCAACTGTCTCAGCACAGTGGGTTaGGGAAAACCTACTCCTGTCAGGCTGAGGCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: SLHHINCLSTVG*GKPTPVRLRQV Trigger: TACCTGCCTCAGCCTGACAGGAGTAGGTTTTCCGCAACCCACTGTGCTGAGACAGTTGATGTGATGCAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR TCA 72 bp | TATGAACCCTACCATGAAACAGACTTACAGGAAACATaGGGGTCACAAGCTGCCAGCATTCTGCTGCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: YEPYHETDLQET*GSQAASILLPR Trigger: CCTTGGCAGCAGAATGCTGGCAGCTTGTGACCCTCATGTTTCCTGTAAGTCTGTTTCATGGTAGGGTTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR GCA 72 bp | GCCACAGGCTACAATTCTTTCATCACTGATCCATCATaGCCTGCAGGTCAGGTAGGAAAACAGAAGTTGATT | + |
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Preference number: 3 (lower is better) Translates to: ATGYNSFITDPS*PAGQVGKQKLI Trigger: AATCAACTTCTGTTTTCCTACCTGACCTGCAGGGCATGATGGATCAGTGATGAAAGAATTGTAGCCTGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR-3UTR CAA 90 bp | TACTGTCAAGCCACTAAGGTAAGACAGAATGACCATGAGGACACCAAGCGCTATAAATTCATCTGCCCCTaGAATTCATGTCCAAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: YCQATKVRQNDHEDTKRYKFICP*NSCPKC Trigger: ACACTTTGGACATGAATTCAAGGGGCAGATGAATTT...ATAGCGCTTGGTGTCCTCATGGTCATTCTGTCTTACCTTAGTGGCTTGACAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR-3UTR CAA 90 bp | GACAGCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTGAATTGTATTTGCTTTaGAAAGTAATCTGCCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: DSQTPQIIRGPRTLVCFSELYLL*KVICPQ Trigger: TTGGGGGCAGATTACTTTCAAAAGCAAATACAATTC...ACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR-3UTR CAA 90 bp | CTATTTCTGGCTAGGTATATCACACACAACATGCAAAGAAAAATCACCACTACAAAATTCATCTGCCCCTaGAATTCATGTCCAAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: LFLARYITHNMQRKITTTKFICP*NSCPKC Trigger: ACACTTTGGACATGAATTCAAGGGGCAGATGAATTT...TGTAGTGGTGATTTTTCTTTGCATGTTGTGTGTGATATACCTAGCCAGAAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR CCA 72 bp | AAACAAACAAAAAGTCCCAATTATCAGGAGAGCCAATaGCTGACATTAAGCAGGAAAATCTTAGCTCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: KQTKSPNYQESQ*LTLSRKILALS Trigger: TGAAAGAGCTAAGATTTTCCTGCTTAATGTCAGCCATTGGCTCTCCTGATAATTGGGACTTTTTGTTTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR GCA 72 bp | TGTTCAGAATATAGCCCGTCATCAAGATTTATCATGTaGCAATACAAAGGACTTTTTCCAGCTGTCATTTTT | + |
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Preference number: 3 (lower is better) Translates to: CSEYSPSSRFIM*QYKGLFPAVIF Trigger: AAAAATGACAGCTGGAAAAAGTCCTTTGTATTGGCACATGATAAATCTTGATGACGGGCTATATTCTGAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR GCA 72 bp | CACATCTATTTCTGGCTAGGTATATCACACACAACATaGAAAGAAAAATCACCACTACACTACTTACTATTT | + |
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Preference number: 3 (lower is better) Translates to: HIYFWLGISHTT*KEKSPLHYLLF Trigger: AAATAGTAAGTAGTGTAGTGGTGATTTTTCTTTGCATGTTGTGTGTGATATACCTAGCCAGAAATAGATGTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR GCA 90 bp | CCATCATGCCCTGCAGGTCAGGTAGGAAAACAGAAGTTGATTGGCTTCCCTCAGGGCCTTCGTGCTTGCTaGTCACACTCGCTGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: PSCPAGQVGKQKLIGFPQGLRAC*SHSLQT Trigger: TGTCTGCAGCGAGTGTGAGCAGCAAGCACGAAGGCC...CTGAGGGAAGCCAATCAACTTCTGTTTTCCTACCTGACCTGCAGGGCATGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR GCA 90 bp | CCATCATGCCCTGCAGGTCAGGTAGGAAAACAGAAGTTGATTGGCTTCCCTCAGAGGCGGTCCCATCTCTaGCTGTGGCATCTGACCATT | + |
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Preference number: 4 (lower is better) Translates to: PSCPAGQVGKQKLIGFPQRRSHL*LWHLTI Trigger: AATGGTCAGATGCCACAGGCAGAGATGGGACCGCCT...CTGAGGGAAGCCAATCAACTTCTGTTTTCCTACCTGACCTGCAGGGCATGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR TCA 90 bp | CCATCATGCCCTGCAGGTCAGGTAGGAAAACAGAAGTTGATTGGCTTCCCTCAGCCTGTCCCTTGCATGTaGAGACTTCCTTGGGACACA | + |
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Preference number: 4 (lower is better) Translates to: PSCPAGQVGKQKLIGFPQPVPCM*RLPWDT Trigger: TGTGTCCCAAGGAAGTCTTCACATGCAAGGGACAGG...CTGAGGGAAGCCAATCAACTTCTGTTTTCCTACCTGACCTGCAGGGCATGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR GCA 90 bp | GACTTCATGAGCCTAGCTGACAGCCAAACACCCCAAATTATCAGAGGACCCAGAAGCCAAGTCTATGTCTaGCTTCCGGGTCTGGGACGA | + |
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Preference number: 4 (lower is better) Translates to: DFMSLADSQTPQIIRGPRSQVYV*LPGLGR Trigger: TCGTCCCAGACCCGGAAGGCAGACATAGACTTGGCT...TCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTCAGCTAGGCTCATGAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR GCA 90 bp | GACAGCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTCGGCTTCGATTTGGCTaGCCTTTCCAGGACTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: DSQTPQIIRGPRTLVCFSRLRFG*PFQDSS Trigger: CGAGGAGTCCTGGAAAGGGCAGCCAAATCGAAGCCG...ACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR TCA 90 bp | GACTTCATGAGCCTAGCTGACAGCCAAACACCCCAAATTATCAGAGGACCCAGACCTGTCCCTTGCATGTaGAGACTTCCTTGGGACACA | + |
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Preference number: 4 (lower is better) Translates to: DFMSLADSQTPQIIRGPRPVPCM*RLPWDT Trigger: TGTGTCCCAAGGAAGTCTTCACATGCAAGGGACAGG...TCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTCAGCTAGGCTCATGAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR TCA 90 bp | GACAGCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTCAGTCACTTTCACTCTaGGCAGGAGGGGCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: DSQTPQIIRGPRTLVCFSQSLSL*AGGASW Trigger: CCAAGAAGCCCCTCCTGCTCAGAGTGAAAGTGACTG...ACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR GCA 90 bp | CCATCATGCCCTGCAGGTCAGGTAGGAAAACAGAAGTTGATTGGCTTCCCTCAGCTGATATCTCACTGTTaGTCTCCTCAGCCACCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PSCPAGQVGKQKLIGFPQLISHC*SPQPPQ Trigger: CTGAGGTGGCTGAGGAGAGCAACAGTGAGATATCAG...CTGAGGGAAGCCAATCAACTTCTGTTTTCCTACCTGACCTGCAGGGCATGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR GCA 90 bp | GACAGCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTAGGCGGTCCCATCTCTaGCTGTGGCATCTGACCATT | + |
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Preference number: 4 (lower is better) Translates to: DSQTPQIIRGPRTLVCFSRRSHL*LWHLTI Trigger: AATGGTCAGATGCCACAGGCAGAGATGGGACCGCCT...ACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR GCA 90 bp | GCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTTTGTGGCCTTCGTGCTTGCTaGTCACACTCGCTGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: AKHPKLSEDPEHLSASVCGLRAC*SHSLQT Trigger: TGTCTGCAGCGAGTGTGAGCAGCAAGCACGAAGGCC...ACAAACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR TCA 90 bp | GACTTCATGAGCCTAGCTGACAGCCAAACACCCCAAATTATCAGAGGACCCAGAGTCGTCCTCAGAGTCTaGTATCTCACTGTTGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: DFMSLADSQTPQIIRGPRVVLRV*YLTVAL Trigger: GAGAGCAACAGTGAGATATCAGACTCTGAGGACGAC...TCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTCAGCTAGGCTCATGAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR TCA 90 bp | GACTTCATGAGCCTAGCTGACAGCCAAACACCCCAAATTATCAGAGGACCCAGATGGGACCCTGTAGAATaGCTGGAGAATGCATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: DFMSLADSQTPQIIRGPRWDPVE*LENACC Trigger: ACAGCATGCATTCTCCAGTCATTCTACAGGGTCCCA...TCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTCAGCTAGGCTCATGAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR GCA 90 bp | GCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTTTGTAGCCAAGTCTATGTCTaGCTTCCGGGTCTGGGACGA | + |
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Preference number: 4 (lower is better) Translates to: AKHPKLSEDPEHLSASVCSQVYV*LPGLGR Trigger: TCGTCCCAGACCCGGAAGGCAGACATAGACTTGGCT...ACAAACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| 3UTR CAA 72 bp | TGCGTGGGACAATGGAGGATGTCTGAGAGGAATAACTaGAACAGCAAGAACACTGAAAGGAGCAGAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: CVGQWRMSERNN*NSKNTERSRGG Trigger: CCCACCTCTGCTCCTTTCAGTGTTCTTGCTGTTCAAGTTATTCCTCTCAGACATCCTCCATTGTCCCACGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR TCA 90 bp | GACAGCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTTCACTGGAGGATTTCTaGGACTGGGACCCTGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: DSQTPQIIRGPRTLVCFSSLEDF*DWDPVE Trigger: TTCTACAGGGTCCCAGTCTCAGAAATCCTCCAGTGA...ACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR TCA 90 bp | GACAGCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTAAGGCACCGCAGGAGTaGGATGTACTTCTGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: DSQTPQIIRGPRTLVCFSKAPQE*DVLLEK Trigger: TTTCTCCAGAAGTACATCTCACTCCTGCGGTGCCTT...ACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR CCA 90 bp | GACTTCATGAGCCTAGCTGACAGCCAAACACCCCAAATTATCAGAGGACCCAGACTCTCTGCGTTCTTCTaGGGAGAGGCCAAAATAGTA | + |
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Preference number: 4 (lower is better) Translates to: DFMSLADSQTPQIIRGPRLSAFF*GEAKIV Trigger: TACTATTTTGGCCTCTCCCCAGAAGAACGCAGAGAG...TCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTCAGCTAGGCTCATGAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR CCA 90 bp | CCATCATGCCCTGCAGGTCAGGTAGGAAAACAGAAGTTGATTGGCTTCCCTCAGCCCAAAAGACTGTTGTaGGTACATGTTCTTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: PSCPAGQVGKQKLIGFPQPKRLL*VHVLAT Trigger: AGTGGCAAGAACATGTACCCACAACAGTCTTTTGGG...CTGAGGGAAGCCAATCAACTTCTGTTTTCCTACCTGACCTGCAGGGCATGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR TCA 90 bp | TACTGTCAAGCCACTAAGGTAAGACAGAATGACCATGAGGACACCAAGCGCTATGTCGTCCTCAGAGTCTaGTATCTCACTGTTGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: YCQATKVRQNDHEDTKRYVVLRV*YLTVAL Trigger: GAGAGCAACAGTGAGATATCAGACTCTGAGGACGAC...ATAGCGCTTGGTGTCCTCATGGTCATTCTGTCTTACCTTAGTGGCTTGACAGTA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR TCA 90 bp | GCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTTTGTTGGGACCCTGTAGAATaGCTGGAGAATGCATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: AKHPKLSEDPEHLSASVCWDPVE*LENACC Trigger: ACAGCATGCATTCTCCAGTCATTCTACAGGGTCCCA...ACAAACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR TCA 90 bp | GCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTTTGTAAGGCACCGCAGGAGTaGGATGTACTTCTGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AKHPKLSEDPEHLSASVCKAPQE*DVLLEK Trigger: TTTCTCCAGAAGTACATCTCACTCCTGCGGTGCCTT...ACAAACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | GACAGCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTAGTGGTCTGTGTCACTaGCAAAATGGGAATCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSQTPQIIRGPRTLVCFSSGLCH*QNGNLS Trigger: GCTCAGATTCCCATTTTGTCAGTGACACAGACCACT...ACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | GCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTTTGTCACTGCAGAAGAACCTaGAGCCAAGTCTATGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AKHPKLSEDPEHLSASVCHCRRT*SQVYVC Trigger: GCAGACATAGACTTGGCTTCAGGTTCTTCTGCAGTG...ACAAACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | TACTGTCAAGCCACTAAGGTAAGACAGAATGACCATGAGGACACCAAGCGCTATCACTGCAGAAGAACCTaGAGCCAAGTCTATGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YCQATKVRQNDHEDTKRYHCRRT*SQVYVC Trigger: GCAGACATAGACTTGGCTTCAGGTTCTTCTGCAGTG...ATAGCGCTTGGTGTCCTCATGGTCATTCTGTCTTACCTTAGTGGCTTGACAGTA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR GCA 90 bp | TACTGTCAAGCCACTAAGGTAAGACAGAATGACCATGAGGACACCAAGCGCTATCTGATATCTCACTGTTaGTCTCCTCAGCCACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YCQATKVRQNDHEDTKRYLISHC*SPQPPQ Trigger: CTGAGGTGGCTGAGGAGAGCAACAGTGAGATATCAG...ATAGCGCTTGGTGTCCTCATGGTCATTCTGTCTTACCTTAGTGGCTTGACAGTA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CCA 90 bp | TACTGTCAAGCCACTAAGGTAAGACAGAATGACCATGAGGACACCAAGCGCTATATGAAGAAGCTGCCCTaGGTTCTCAGACTCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YCQATKVRQNDHEDTKRYMKKLP*VLRLQF Trigger: GAACTGGAGTCTGAGAACCCAGGGCAGCTTCTTCAT...ATAGCGCTTGGTGTCCTCATGGTCATTCTGTCTTACCTTAGTGGCTTGACAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CCA 90 bp | GACTTCATGAGCCTAGCTGACAGCCAAACACCCCAAATTATCAGAGGACCCAGACCCAAAAGACTGTTGTaGGTACATGTTCTTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DFMSLADSQTPQIIRGPRPKRLL*VHVLAT Trigger: AGTGGCAAGAACATGTACCCACAACAGTCTTTTGGG...TCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTCAGCTAGGCTCATGAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | GCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTTTGTCAAAGGAAGGTCAGCTaGGTTCCCATTGTTCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AKHPKLSEDPEHLSASVCQRKVS*VPIVLR Trigger: CCTAAGAACAATGGGAACTCAGCTGACCTTCCTTTG...ACAAACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | GACAGCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTGTGCAGATGGGGCTTTaGTTGGCTTGTTTAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSQTPQIIRGPRTLVCFSVQMGL*LACLDS Trigger: AGAATCTAAACAAGCCAATCAAAGCCCCATCTGCAC...ACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | GACAGCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTTACATTTATCATCGCTaGTCTCCAGTGTGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSQTPQIIRGPRTLVCFSYIYHR*SPVCLA Trigger: AGCCAAGCACACTGGAGATCAGCGATGATAAATGTA...ACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | GCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTTTGTAGTGGTCTGTGTCACTaGCAAAATGGGAATCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AKHPKLSEDPEHLSASVCSGLCH*QNGNLS Trigger: GCTCAGATTCCCATTTTGTCAGTGACACAGACCACT...ACAAACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | GACTTCATGAGCCTAGCTGACAGCCAAACACCCCAAATTATCAGAGGACCCAGAGAACTCATCTACTGCTaGGACAGAATCGCATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DFMSLADSQTPQIIRGPRELIYC*DRIAFF Trigger: AAAGAATGCGATTCTGTCTCAGCAGTAGATGAGTTC...TCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTCAGCTAGGCTCATGAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR GCA 90 bp | GACAGCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTAGAATGACTGGAGAATaGATGCTGTCTTACACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: DSQTPQIIRGPRTLVCFSRMTGE*MLSYTR Trigger: TCGGGTGTAAGACAGCATGCATTCTCCAGTCATTCT...ACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTTTGTCAGCATCAGGTCCAGTaGTCTGTGTCACTGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AKHPKLSEDPEHLSASVCQHQVQ*SVSLTK Trigger: TTTTGTCAGTGACACAGACCACTGGACCTGATGCTG...ACAAACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | CCATCATGCCCTGCAGGTCAGGTAGGAAAACAGAAGTTGATTGGCTTCCCTCAGTCTGTAATCTGTATCTaGATGGAAATTTTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSCPAGQVGKQKLIGFPQSVICI*MEILPR Trigger: TCTGGGCAAAATTTCCATTCAGATACAGATTACAGA...CTGAGGGAAGCCAATCAACTTCTGTTTTCCTACCTGACCTGCAGGGCATGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | TACTGTCAAGCCACTAAGGTAAGACAGAATGACCATGAGGACACCAAGCGCTATTACATTTATCATCGCTaGTCTCCAGTGTGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YCQATKVRQNDHEDTKRYYIYHR*SPVCLA Trigger: AGCCAAGCACACTGGAGATCAGCGATGATAAATGTA...ATAGCGCTTGGTGTCCTCATGGTCATTCTGTCTTACCTTAGTGGCTTGACAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | GACAGCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTGAACTCATCTACTGCTaGGACAGAATCGCATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DSQTPQIIRGPRTLVCFSELIYC*DRIAFF Trigger: AAAGAATGCGATTCTGTCTCAGCAGTAGATGAGTTC...ACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CCA 90 bp | GACTTCATGAGCCTAGCTGACAGCCAAACACCCCAAATTATCAGAGGACCCAGATCCAATCTAACCTGGTaGCATTTATCTCCAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DFMSLADSQTPQIIRGPRSNLTW*HLSPTS Trigger: TGAAGTTGGAGATAAATGCCACCAGGTTAGATTGGA...TCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTCAGCTAGGCTCATGAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173078.8 |
||
| CDS-3UTR TCA 90 bp | CTATTTCTGGCTAGGTATATCACACACAACATGCAAAGAAAAATCACCACTACACTGGGGGAGGTGGCTTaGGGTTCTTCGGTGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFLARYITHNMQRKITTTLGEVA*GSSVYV Trigger: AACATACACCGAAGAACCTCAAGCCACCTCCCCCAG...TGTAGTGGTGATTTTTCTTTGCATGTTGTGTGTGATATACCTAGCCAGAAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | CTATTTCTGGCTAGGTATATCACACACAACATGCAAAGAAAAATCACCACTACACAGTCACTTTCACTCTaGGCAGGAGGGGCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLARYITHNMQRKITTTQSLSL*AGGASW Trigger: CCAAGAAGCCCCTCCTGCTCAGAGTGAAAGTGACTG...TGTAGTGGTGATTTTTCTTTGCATGTTGTGTGTGATATACCTAGCCAGAAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR GCA 90 bp | CTATTTCTGGCTAGGTATATCACACACAACATGCAAAGAAAAATCACCACTACACGTCTGCTCTCCGCATaGTTCCTTTCCTGTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LFLARYITHNMQRKITTTRLLSA*FLSCPL Trigger: CAAGGGACAGGAAAGGAAGCATGCGGAGAGCAGACG...TGTAGTGGTGATTTTTCTTTGCATGTTGTGTGTGATATACCTAGCCAGAAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | TACTGTCAAGCCACTAAGGTAAGACAGAATGACCATGAGGACACCAAGCGCTATTTTTCTACGAATCCCTaGAAAGGATACCCATACCAA | + |
|
Preference number: 4 (lower is better) Translates to: YCQATKVRQNDHEDTKRYFSTNP*KGYPYQ Trigger: TTGGTATGGGTATCCTTTTCAGGGATTCGTAGAAAA...ATAGCGCTTGGTGTCCTCATGGTCATTCTGTCTTACCTTAGTGGCTTGACAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | CTATTTCTGGCTAGGTATATCACACACAACATGCAAAGAAAAATCACCACTACATCACTGGAGGATTTCTaGGACTGGGACCCTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFLARYITHNMQRKITTTSLEDF*DWDPVE Trigger: TTCTACAGGGTCCCAGTCTCAGAAATCCTCCAGTGA...TGTAGTGGTGATTTTTCTTTGCATGTTGTGTGTGATATACCTAGCCAGAAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | TACTGTCAAGCCACTAAGGTAAGACAGAATGACCATGAGGACACCAAGCGCTATGATAATTTCCCATTATaGTCCAATCTAACGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YCQATKVRQNDHEDTKRYDNFPL*SNLTWH Trigger: ATGCCACGTTAGATTGGATCATAATGGGAAATTATC...ATAGCGCTTGGTGTCCTCATGGTCATTCTGTCTTACCTTAGTGGCTTGACAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173286.8 |
||
| CDS-3UTR GCA 90 bp | TACTGTCAAGCCACTAAGGTAAGACAGAATGACCATGAGGACACCAAGCGCTATTCTTCTTTTGGTCTTTaGAATCTATCCACAGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: YCQATKVRQNDHEDTKRYSSFGL*NLSTEL Trigger: CAATTCTGTGGATAGATTGCAAAGACCAAAAGAAGA...ATAGCGCTTGGTGTCCTCATGGTCATTCTGTCTTACCTTAGTGGCTTGACAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CCA 90 bp | CTATTTCTGGCTAGGTATATCACACACAACATGCAAAGAAAAATCACCACTACACAGCATCAGGTCCAGTaGTCTGTGTCACTGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFLARYITHNMQRKITTTQHQVQ*SVSLTK Trigger: TTTTGTCAGTGACACAGACCACTGGACCTGATGCTG...TGTAGTGGTGATTTTTCTTTGCATGTTGTGTGTGATATACCTAGCCAGAAATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CCA 90 bp | AAATACAGAGTACAGTTAGTTTTACAAAGTGACACAGATGAGAGAATACTGTGCATGAAGAAGCTGCCCTaGGTTCTCAGACTCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KYRVQLVLQSDTDERILCMKKLP*VLRLQF Trigger: GAACTGGAGTCTGAGAACCCAGGGCAGCTTCTTCAT...GCACAGTATTCTCTCATCTGTGTCACTTTGTAAAACTAACTGTACTCTGTATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CCA 90 bp | AAATACAGAGTACAGTTAGTTTTACAAAGTGACACAGATGAGAGAATACTGTGCCTCTCTGCGTTCTTCTaGGGAGAGGCCAAAATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KYRVQLVLQSDTDERILCLSAFF*GEAKIV Trigger: TACTATTTTGGCCTCTCCCCAGAAGAACGCAGAGAG...GCACAGTATTCTCTCATCTGTGTCACTTTGTAAAACTAACTGTACTCTGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | AAATACAGAGTACAGTTAGTTTTACAAAGTGACACAGATGAGAGAATACTGTGCGTGCAGATGGGGCTTTaGTTGGCTTGTTTAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KYRVQLVLQSDTDERILCVQMGL*LACLDS Trigger: AGAATCTAAACAAGCCAATCAAAGCCCCATCTGCAC...GCACAGTATTCTCTCATCTGTGTCACTTTGTAAAACTAACTGTACTCTGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR GCA 90 bp | AAATACAGAGTACAGTTAGTTTTACAAAGTGACACAGATGAGAGAATACTGTGCAGAATGACTGGAGAATaGATGCTGTCTTACACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KYRVQLVLQSDTDERILCRMTGE*MLSYTR Trigger: TCGGGTGTAAGACAGCATGCATTCTCCAGTCATTCT...GCACAGTATTCTCTCATCTGTGTCACTTTGTAAAACTAACTGTACTCTGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | CTATTTCTGGCTAGGTATATCACACACAACATGCAAAGAAAAATCACCACTACATTTTCTACGAATCCCTaGAAAGGATACCCATACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFLARYITHNMQRKITTTFSTNP*KGYPYQ Trigger: TTGGTATGGGTATCCTTTTCAGGGATTCGTAGAAAA...TGTAGTGGTGATTTTTCTTTGCATGTTGTGTGTGATATACCTAGCCAGAAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR TCA 90 bp | AAATACAGAGTACAGTTAGTTTTACAAAGTGACACAGATGAGAGAATACTGTGCGATAATTTCCCATTATaGTCCAATCTAACCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KYRVQLVLQSDTDERILCDNFPL*SNLTWW Trigger: CCACCAGGTTAGATTGGATCATAATGGGAAATTATC...GCACAGTATTCTCTCATCTGTGTCACTTTGTAAAACTAACTGTACTCTGTATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173078.8 |
||
| CDS-3UTR TCA 90 bp | AAATACAGAGTACAGTTAGTTTTACAAAGTGACACAGATGAGAGAATACTGTGCTCTGTAATCTGTATCTaGATGGAAATTTTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KYRVQLVLQSDTDERILCSVICI*MEILPR Trigger: TCTGGGCAAAATTTCCATTCAGATACAGATTACAGA...GCACAGTATTCTCTCATCTGTGTCACTTTGTAAAACTAACTGTACTCTGTATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR GCA 90 bp | CTATTTCTGGCTAGGTATATCACACACAACATGCAAAGAAAAATCACCACTACATCTTCTTTTGGTCTTTaGAATCTATCCACAGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: LFLARYITHNMQRKITTTSSFGL*NLSTEL Trigger: CAATTCTGTGGATAGATTGCAAAGACCAAAAGAAGA...TGTAGTGGTGATTTTTCTTTGCATGTTGTGTGTGATATACCTAGCCAGAAATAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CAA 90 bp | GACTTCATGAGCCTAGCTGACAGCCAAACACCCCAAATTATCAGAGGACCCAGATCTGATATCTCACTGTaGCTCTCCTCAGCCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: DFMSLADSQTPQIIRGPRSDISL*LSSATS Trigger: TGAGGTGGCTGAGGAGAGCAACAGTGAGATATCAGA...TCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTCAGCTAGGCTCATGAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CAA 90 bp | CCATCATGCCCTGCAGGTCAGGTAGGAAAACAGAAGTTGATTGGCTTCCCTCAGTCAGCTGAGTTCCCATaGTTCTTAGGGTTCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PSCPAGQVGKQKLIGFPQSAEFP*FLGFSL Trigger: CAGTGAGAACCCTAAGAACAATGGGAACTCAGCTGA...CTGAGGGAAGCCAATCAACTTCTGTTTTCCTACCTGACCTGCAGGGCATGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CAA 90 bp | CCATCATGCCCTGCAGGTCAGGTAGGAAAACAGAAGTTGATTGGCTTCCCTCAGAGACTCTTCAATAGCTaGCTTCTCTCTGCGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSCPAGQVGKQKLIGFPQRLFNS*LLSAFF Trigger: GAAGAACGCAGAGAGAAGCAAGCTATTGAAGAGTCT...CTGAGGGAAGCCAATCAACTTCTGTTTTCCTACCTGACCTGCAGGGCATGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CAA 90 bp | TACTGTCAAGCCACTAAGGTAAGACAGAATGACCATGAGGACACCAAGCGCTATAGCAGGAGGGGCTTCTaGGAACCAAGTATTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YCQATKVRQNDHEDTKRYSRRGF*EPSILR Trigger: CCTCAGAATACTTGGTTCCAAGAAGCCCCTCCTGCT...ATAGCGCTTGGTGTCCTCATGGTCATTCTGTCTTACCTTAGTGGCTTGACAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CAA 90 bp | GCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTTTGTGCAGTACTTTTACTCTaGCAGCTGTCGTCCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AKHPKLSEDPEHLSASVCAVLLL*QLSSSE Trigger: CTCTGAGGACGACAGCTGCAAGAGTAAAAGTACTGC...ACAAACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CAA 90 bp | GACTTCATGAGCCTAGCTGACAGCCAAACACCCCAAATTATCAGAGGACCCAGAAGTGCAGATGGGGCTTaGATTGGCTTGTTTAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: DFMSLADSQTPQIIRGPRSADGA*IGLFRF Trigger: GAATCTAAACAAGCCAATCAAAGCCCCATCTGCACT...TCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTCAGCTAGGCTCATGAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CAA 90 bp | GACTTCATGAGCCTAGCTGACAGCCAAACACCCCAAATTATCAGAGGACCCAGAAGACTCTTCAATAGCTaGCTTCTCTCTGCGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DFMSLADSQTPQIIRGPRRLFNS*LLSAFF Trigger: GAAGAACGCAGAGAGAAGCAAGCTATTGAAGAGTCT...TCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTCAGCTAGGCTCATGAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CAA 90 bp | GACAGCCAAACACCCCAAATTATCAGAGGACCCAGAACACTTGTCTGCTTCAGTAGACTCCAGTTCAGGTaGGTAAGACAATTGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: DSQTPQIIRGPRTLVCFSRLQFR*VRQLSM Trigger: CATGGACAATTGTCTTACCAACCTGAACTGGAGTCT...ACTGAAGCAGACAAGTGTTCTGGGTCCTCTGATAATTTGGGGTGTTTGGCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
||
| CDS-3UTR CAA 90 bp | TACTGTCAAGCCACTAAGGTAAGACAGAATGACCATGAGGACACCAAGCGCTATAGTGCAGATGGGGCTTaGATTGGCTTGTTTAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: YCQATKVRQNDHEDTKRYSADGA*IGLFRF Trigger: GAATCTAAACAAGCCAATCAAAGCCCCATCTGCACT...ATAGCGCTTGGTGTCCTCATGGTCATTCTGTCTTACCTTAGTGGCTTGACAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS TCA 90 bp | ACTGATGAACTAGAAAGGGCAGGGAAAGCCTGTTCATCCCGGTTCTaGATCTCATACAGTAAACGAGACTCTTCAATAGCTTGCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: TDELERAGKACSSRF*ISYSKRDSSIACFS Trigger: AGAGAAGCAAGCTATTGAAGAGTCTCGTTTACTGTATGAGATTCAGAACCGGGATGAACAGGCTTTCCCTGCCCTTTCTAGTTCATCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR CAA 90 bp | CTATTTCTGGCTAGGTATATCACACACAACATGCAAAGAAAAATCACCACTACAAGCAGGAGGGGCTTCTaGGAACCAAGTATTCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LFLARYITHNMQRKITTTSRRGF*EPSILR Trigger: CCTCAGAATACTTGGTTCCAAGAAGCCCCTCCTGCT...TGTAGTGGTGATTTTTCTTTGCATGTTGTGTGTGATATACCTAGCCAGAAATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR CAA 90 bp | CTATTTCTGGCTAGGTATATCACACACAACATGCAAAGAAAAATCACCACTACATCTGATATCTCACTGTaGCTCTCCTCAGCCACCTCA | + |
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Preference number: 5 (lower is better) Translates to: LFLARYITHNMQRKITTTSDISL*LSSATS Trigger: TGAGGTGGCTGAGGAGAGCAACAGTGAGATATCAGA...TGTAGTGGTGATTTTTCTTTGCATGTTGTGTGTGATATACCTAGCCAGAAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR CAA 90 bp | AAATACAGAGTACAGTTAGTTTTACAAAGTGACACAGATGAGAGAATACTGTGCGCAGTACTTTTACTCTaGCAGCTGTCGTCCTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: KYRVQLVLQSDTDERILCAVLLL*QLSSSE Trigger: CTCTGAGGACGACAGCTGCAAGAGTAAAAGTACTGC...GCACAGTATTCTCTCATCTGTGTCACTTTGTAAAACTAACTGTACTCTGTATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS-3UTR CAA 90 bp | CTATTTCTGGCTAGGTATATCACACACAACATGCAAAGAAAAATCACCACTACAAGACTCCAGTTCAGGTaGGTAAGACAATTGTCCATG | + |
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Preference number: 5 (lower is better) Translates to: LFLARYITHNMQRKITTTRLQFR*VRQLSM Trigger: CATGGACAATTGTCTTACCAACCTGAACTGGAGTCT...TGTAGTGGTGATTTTTCTTTGCATGTTGTGTGTGATATACCTAGCCAGAAATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS CCA 72 bp | ATGGGCGTCTCATCCTCCAGCGGCCCCACGCCGCCCTaGTCCACGCCGTCGGGCGCGCCGACGGCTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: MGVSSSSGPTPP*STPSGAPTAAS Trigger: GGAGGCAGCCGTCGGCGCGCCCGACGGCGTGGACCAGGGCGGCGTGGGGCCGCTGGAGGATGAGACGCCCAT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS GCA 72 bp | CACTGGCCTCGGGGTGCAGAGAGTAGTGGGCATCGGTaGAAGGACAGTCACTTTCACTCTGAGCAGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: HWPRGAESSGHR*KDSHFHSEQEG Trigger: CCCCTCCTGCTCAGAGTGAAAGTGACTGTCCTTGCACCGATGCCCACTACTCTCTGCACCCCGAGGCCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS GCA 72 bp | GCCAAGTCTATGTCTGCCTTCCGGGTCTGGGACGACTaGTCCACTCGGCCTTCGTGCTTGCTGCTCACACTC | + |
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Preference number: 6 (lower is better) Translates to: AKSMSAFRVWDD*STRPSCLLLTL Trigger: GAGTGTGAGCAGCAAGCACGAAGGCCGAGTGGAGCAGTCGTCCCAGACCCGGAAGGCAGACATAGACTTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS CCA 72 bp | GAACCTGAAGCCAAGTCTATGTCTGCCTTCCGGGTCTaGGACGACTGCTCCACTCGGCCTTCGTGCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: EPEAKSMSAFRV*DDCSTRPSCLL Trigger: CAGCAAGCACGAAGGCCGAGTGGAGCAGTCGTCCCAGACCCGGAAGGCAGACATAGACTTGGCTTCAGGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS TCA 72 bp | TGCTCTCCGCATGCTTCCTTTCCTGTCCCTTGCATGTaGAGACTTCCTTGGGACACACGCATTGCTATTCTG | + |
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Preference number: 6 (lower is better) Translates to: CSPHASFPVPCM*RLPWDTRIAIL Trigger: CAGAATAGCAATGCGTGTGTCCCAAGGAAGTCTTCACATGCAAGGGACAGGAAAGGAAGCATGCGGAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS CAA 90 bp | GAGGGTTTAAATCCATTCACATCAGTAGCAGCAGTACTTTTACTCTaGCAGCTGTCGTCCTCAGAGTCTGATATCTCACTGTTGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: EGLNPFTSVAAVLLL*QLSSSESDISLLLS Trigger: GGAGAGCAACAGTGAGATATCAGACTCTGAGGACGACAGCTGCAAGAGTAAAAGTACTGCTGCTACTGATGTGAATGGATTTAAACCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS CCA 72 bp | AGACTCTTCAATAGCTTGCTTCTCTCTGCGTTCTTCTaGGGAGAGGCCAAAATAGTAAGATTCACGACTCAC | + |
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Preference number: 6 (lower is better) Translates to: RLFNSLLLSAFF*GEAKIVRFTTH Trigger: GTGAGTCGTGAATCTTACTATTTTGGCCTCTCCCCAGAAGAACGCAGAGAGAAGCAAGCTATTGAAGAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS CAA 72 bp | ACCTTTCTGGACAAAGGAAGGTCAGCTGAGTTCCCATaGTTCTTAGGGTTCTCACTGCCTGAGGGTTTAAAT | + |
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Preference number: 6 (lower is better) Translates to: TFLDKGRSAEFP*FLGFSLPEGLN Trigger: ATTTAAACCCTCAGGCAGTGAGAACCCTAAGAACAATGGGAACTCAGCTGACCTTCCTTTGTCCAGAAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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| CDS CAA 72 bp | AATCCATTCACATCAGTAGCAGCAGTACTTTTACTCTaGCAGCTGTCGTCCTCAGAGTCTGATATCTCACTG | + |
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Preference number: 6 (lower is better) Translates to: NPFTSVAAVLLL*QLSSSESDISL Trigger: CAGTGAGATATCAGACTCTGAGGACGACAGCTGCAAGAGTAAAAGTACTGCTGCTACTGATGTGAATGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173078.8 ENSMUST00000173286.8 |
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