Pregenerated sensors for OTUB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021203Ensembl transcript IDs: ENSMUST00000021620.13, ENSMUST00000101094.9, ENSMUST00000148371.8, ENSMUST00000179684.3
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGTGGTCCCATGGTTATCCTACAGAGGAGGGTGTGGCTAGCAGCTaGCAGGTGTGTCCTCAGGTGAGGCAGCAAGGCAAGGTAAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: GWSHGYPTEEGVASS*QVCPQVRQQGKVSG Trigger: GCCACTTACCTTGCCTTGCTGCCTCACCTGAGGACACACCTGGCAGCTGCTAGCCACACCCTCCTCTGTAGGATAACCATGGGACCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR CCA 90 bp | CAGCTGCCAGGTGTGTCCTCAGGTGAGGCAGCAAGGCAAGGTAAGTaGCTATTAAGGGGCACGTGCAGAGGAGGAAATGTCCCTGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: QLPGVSSGEAARQGK*LLRGTCRGGNVPAA Trigger: GGCAGCAGGGACATTTCCTCCTCTGCACGTGCCCCTTAATAGCCACTTACCTTGCCTTGCTGCCTCACCTGAGGACACACCTGGCAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR TCA 90 bp | TCGGGTACAAGCCCTAGTCCTTGGCAAGCCTTATCCAGGTGGGATTaGCAGCAGAACCCTAGAGGGCCTGTCCTCCAGAGTCAGGAGTTC | + |
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Preference number: 1 (lower is better) Translates to: SGTSPSPWQALSRWD*QQNPRGPVLQSQEF Trigger: GAACTCCTGACTCTGGAGGACAGGCCCTCTAGGGTTCTGCTGTCAATCCCACCTGGATAAGGCTTGCCAAGGACTAGGGCTTGTACCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR CCA 90 bp | CAGATAGCAGGTGTACCGGGCTGTTACTGTCCCCACTGGCTGTTCTaGGAGATGAGGAATTCAAAGATGAGCTCTCAGCACCTGCGCTCC | + |
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Preference number: 1 (lower is better) Translates to: QIAGVPGCYCPHWLF*EMRNSKMSSQHLRS Trigger: GGAGCGCAGGTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCAGTGGGGACAGTAACAGCCCGGTACACCTGCTATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR GCA 90 bp | GAAAACTGCTATGCTCGGCCAGGTTTTAGCATGTGTTTAAGCCCATaGCCCTGGAGCAGCCCAGGCTATCCATCAGTCAGGCATCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: ENCYARPGFSMCLSP*PWSSPGYPSVRHPV Trigger: CACAGGATGCCTGACTGATGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTTAAACACATGCTAAAACCTGGCCGAGCATAGCAGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR CCA 90 bp | TGCTATGCTCGGCCAGGTTTTAGCATGTGTTTAAGCCCATGCCCCTaGAGCAGCCCAGGCTATCCATCAGTCAGGCATCCTGTGCTCATA | + |
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Preference number: 1 (lower is better) Translates to: CYARPGFSMCLSPCP*SSPGYPSVRHPVLI Trigger: TATGAGCACAGGATGCCTGACTGATGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTTAAACACATGCTAAAACCTGGCCGAGCATAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR CCA 90 bp | CTCAGAAGACAGATAGCAGGTGTACCGGGCTGTTACTGTCCCCACTaGCTGTTCTGGGAGATGAGGAATTCAAAGATGAGCTCTCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: LRRQIAGVPGCYCPH*LFWEMRNSKMSSQH Trigger: GTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCAGTGGGGACAGTAACAGCCCGGTACACCTGCTATCTGTCTTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR TCA 90 bp | AAACCTGTCCTCAGTCCTTCCAGGTCAGAACTGCACATATCCAGCTaGATACCTAGACCCTATTCACTGGGGAGGATGGACAGCTGTAGC | + |
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Preference number: 1 (lower is better) Translates to: KPVLSPSRSELHISS*IPRPYSLGRMDSCS Trigger: GCTACAGCTGTCCATCCTCCCCAGTGAATAGGGTCTAGGTATTCAGCTGGATATGTGCAGTTCTGACCTGGAAGGACTGAGGACAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR GCA 90 bp | GGAAATGTCCCTGCTGCCGACATCTATGGCTTGTCTGACCTTCCCTaGCTAACTGCCTATGAAGCTAGGCTGAAGAAAACCAAAGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: GNVPAADIYGLSDLP*LTAYEARLKKTKEP Trigger: AGGCTCTTTGGTTTTCTTCAGCCTAGCTTCATAGGCAGTTAGGCAGGGAAGGTCAGACAAGCCATAGATGTCGGCAGCAGGGACATTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR CCA 90 bp | CAGGCATCCTGTGCTCATAATATTAAGCCTGGAAATGGAGACTACTaGCTGAAGACAGTTGTGGAAATAAGGGCCCACGCTGTGGGCAAC | + |
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Preference number: 1 (lower is better) Translates to: QASCAHNIKPGNGDY*LKTVVEIRAHAVGN Trigger: GTTGCCCACAGCGTGGGCCCTTATTTCCACAACTGTCTTCAGCCAGTAGTCTCCATTTCCAGGCTTAATATTATGAGCACAGGATGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR GCA 90 bp | TGCCTAACTGCCTATGAAGCTAGGCTGAAGAAAACCAAAGAGCCTTaGGAAACCTGTCCTCAGTCCTTCCAGGTCAGAACTGCACATATC | + |
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Preference number: 1 (lower is better) Translates to: CLTAYEARLKKTKEP*ETCPQSFQVRTAHI Trigger: GATATGTGCAGTTCTGACCTGGAAGGACTGAGGACAGGTTTCGCAAGGCTCTTTGGTTTTCTTCAGCCTAGCTTCATAGGCAGTTAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR GCA 90 bp | CTGGAGCCTTTGGATCTAAATGTTGCCAAAGTGGGTCTTGGAAACTaGACACTACCCAGACATCTTGGTGCTTTTGGCTTACACCAAACA | + |
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Preference number: 1 (lower is better) Translates to: LEPLDLNVAKVGLGN*TLPRHLGAFGLHQT Trigger: TGTTTGGTGTAAGCCAAAAGCACCAAGATGTCTGGGTAGTGTGCAGTTTCCAAGACCCACTTTGGCAACATTTAGATCCAAAGGCTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR CCA 90 bp | TTAAGTCATTCACAGTCCATAGTGGGCACAGGTCTCAGTTCAGTGTaGCTTTACCCAAGAGGCTATATGTTTCCTAGTTGTCTAAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: LSHSQSIVGTGLSSV*LYPRGYMFPSCLSH Trigger: GTGACTTAGACAACTAGGAAACATATAGCCTCTTGGGTAAAGCCACACTGAACTGAGACCTGTGCCCACTATGGACTGTGAATGACTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR CCA 90 bp | TCCAATGGGGTTCTTGAAGTAAATGGGTACAGAGAGAAGAGTTTCTaGCCTTGTGGTCCAGAGTTAGCAGGCATTATATCATCTATCAAA | + |
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Preference number: 1 (lower is better) Translates to: SNGVLEVNGYREKSF*PCGPELAGIISSIK Trigger: TTTGATAGATGATATAATGCCTGCTAACTCTGGACCACAAGGCCAGAAACTCTTCTCTCTGTACCCATTTACTTCAAGAACCCCATTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCCCATGCCCCTGGAGCAGCCCAGGCTATCCATCAGTCAGGCATCCTGTGCTCAGAGTCAGGAGTTCTaGTCCCGACCTCACAACCTG | + |
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Preference number: 2 (lower is better) Translates to: KPMPLEQPRLSISQASCAQSQEF*SRPHNL Trigger: CAGGTTGTGAGGTCGGGACCAGAACTCCTGACTCTG...AGCACAGGATGCCTGACTGATGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGGGTGTGGCTAGCAGCTGCCAGGTGTGTCCTCAGGTGAGGCAGCAAGGCCTAGACCCTATTCACTaGGGAGGATGGACAGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: EEGVASSCQVCPQVRQQGLDPIH*GGWTAV Trigger: TACAGCTGTCCATCCTCCCCAGTGAATAGGGTCTAG...GCCTTGCTGCCTCACCTGAGGACACACCTGGCAGCTGCTAGCCACACCCTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR GCA 90 bp | CTTGGGTACTCACAGAACCCCAAGCCCCACTTTCCCAGGCTGGCTGTTTACTTGGGTGTGGCTAGCAGCTaGCAGGTGTGTCCTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LGYSQNPKPHFPRLAVYLGVASS*QVCPQV Trigger: CACCTGAGGACACACCTGGCAGCTGCTAGCCACACC...CAAGTAAACAGCCAGCCTGGGAAAGTGGGGCTTGGGGTTCTGTGAGTACCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGGGTGTGGCTAGCAGCTGCCAGGTGTGTCCTCAGGTGAGGCAGCAAGGCGTCCAATGGGGTTCTTaGAGTAAATGGGTACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: EEGVASSCQVCPQVRQQGVQWGS*SKWVQR Trigger: TCTCTGTACCCATTTACTTCAAGAACCCCATTGGAC...GCCTTGCTGCCTCACCTGAGGACACACCTGGCAGCTGCTAGCCACACCCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGGAAATGTCCCTGCTGCCGACATCTATGGCTTGTCTGACCTTCCCTGCCTTATCCAGGTGGGATTaGCAGCAGAACCCTAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: EEEMSLLPTSMACLTFPALSRWD*QQNPRG Trigger: CCCTCTAGGGTTCTGCTGTCAATCCCACCTGGATAA...GGCAGGGAAGGTCAGACAAGCCATAGATGTCGGCAGCAGGGACATTTCCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR GCA 90 bp | GGTCCCATGGTTATCCTACAGAGGAGGGTGTGGCTAGCAGCTGCCAGGTGTGTCCTATTAAGGGGCACGTaGAGAGGAGGAAATGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: GPMVILQRRVWLAAARCVLLRGT*RGGNVP Trigger: AGGGACATTTCCTCCTCTGCACGTGCCCCTTAATAG...GACACACCTGGCAGCTGCTAGCCACACCCTCCTCTGTAGGATAACCATGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGTACTCACAGAACCCCAAGCCCCACTTTCCCAGGCTGGCTGTTTACTTGCACAGGGTGGTCCCATaGTTATCCTACAGAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LGYSQNPKPHFPRLAVYLHRVVP*LSYRGG Trigger: CCCTCCTCTGTAGGATAACCATGGGACCACCCTGTG...CAAGTAAACAGCCAGCCTGGGAAAGTGGGGCTTGGGGTTCTGTGAGTACCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGTTCTGGGAGATGAGGAATTCAAAGATGAGCTCTCAGCACCTGCGCTCCTTAAGCCCATGCCCCTaGAGCAGCCCAGGCTATCCA | + |
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Preference number: 2 (lower is better) Translates to: WLFWEMRNSKMSSQHLRSLSPCP*SSPGYP Trigger: TGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTTAA...GGAGCGCAGGTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR CAA 90 bp | ATACCTAGACCCTATTCACTGGGGAGGATGGACAGCTGTAGCCCCTaGGTCCCAGACATGGACACACTAACTCGGGTACAAGCCCTAGTC | + |
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Preference number: 2 (lower is better) Translates to: IPRPYSLGRMDSCSP*VPDMDTLTRVQALV Trigger: GACTAGGGCTTGTACCCGAGTTAGTGTGTCCATGTCTGGGACCAAGGGGCTACAGCTGTCCATCCTCCCCAGTGAATAGGGTCTAGGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCCCATGCCCCTGGAGCAGCCCAGGCTATCCATCAGTCAGGCATCCTGTGCTGTCCAATGGGGTTCTTaGAGTAAATGGGTACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KPMPLEQPRLSISQASCAVQWGS*SKWVQR Trigger: TCTCTGTACCCATTTACTTCAAGAACCCCATTGGAC...AGCACAGGATGCCTGACTGATGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR GCA 90 bp | AAGCCCATGCCCCTGGAGCAGCCCAGGCTATCCATCAGTCAGGCATCCTGTGCTCTTCCAGGTCAGAACTaGACATATCCAGCTGAATAC | + |
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Preference number: 2 (lower is better) Translates to: KPMPLEQPRLSISQASCALPGQN*TYPAEY Trigger: GTATTCAGCTGGATATGTGCAGTTCTGACCTGGAAG...AGCACAGGATGCCTGACTGATGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGTTCTGGGAGATGAGGAATTCAAAGATGAGCTCTCAGCACCTGCGCTCCCAGAGTCAGGAGTTCTaGTCCCGACCTCACAACCTG | + |
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Preference number: 2 (lower is better) Translates to: WLFWEMRNSKMSSQHLRSQSQEF*SRPHNL Trigger: CAGGTTGTGAGGTCGGGACCAGAACTCCTGACTCTG...GGAGCGCAGGTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCACTGGCTGTTCTGGGAGATGAGGAATTCAAAGATGAGCTCTCAGCACCTGATTCACTGGGGAGGATaGACAGCTGTAGCCCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: PHWLFWEMRNSKMSSQHLIHWGG*TAVAPW Trigger: CCAAGGGGCTACAGCTGTCCATCCTCCCCAGTGAAT...CAGGTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCAGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGGAAATGTCCCTGCTGCCGACATCTATGGCTTGTCTGACCTTCCCTGCCCTAGACCCTATTCACTaGGGAGGATGGACAGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: EEEMSLLPTSMACLTFPALDPIH*GGWTAV Trigger: TACAGCTGTCCATCCTCCCCAGTGAATAGGGTCTAG...GGCAGGGAAGGTCAGACAAGCCATAGATGTCGGCAGCAGGGACATTTCCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGTTCTGGGAGATGAGGAATTCAAAGATGAGCTCTCAGCACCTGCGCTCCCACAGGGTGGTCCCATaGTTATCCTACAGAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: WLFWEMRNSKMSSQHLRSHRVVP*LSYRGG Trigger: CCCTCCTCTGTAGGATAACCATGGGACCACCCTGTG...GGAGCGCAGGTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCACTGGCTGTTCTGGGAGATGAGGAATTCAAAGATGAGCTCTCAGCACCTGCTTTTCTCCCCTGTATaGTTACTGCCCTGGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PHWLFWEMRNSKMSSQHLLFSPV*LLPWLR Trigger: CCTCAGCCAGGGCAGTAACCATACAGGGGAGAAAAG...CAGGTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCAGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGTACTCACAGAACCCCAAGCCCCACTTTCCCAGGCTGGCTGTTTACTTGCTAGACCCTATTCACTaGGGAGGATGGACAGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: LGYSQNPKPHFPRLAVYLLDPIH*GGWTAV Trigger: TACAGCTGTCCATCCTCCCCAGTGAATAGGGTCTAG...CAAGTAAACAGCCAGCCTGGGAAAGTGGGGCTTGGGGTTCTGTGAGTACCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGTACTCACAGAACCCCAAGCCCCACTTTCCCAGGCTGGCTGTTTACTTGTGCCAAAGTGGGTCTTaGAAACTGCACACTACCCAG | + |
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Preference number: 2 (lower is better) Translates to: LGYSQNPKPHFPRLAVYLCQSGS*KLHTTQ Trigger: CTGGGTAGTGTGCAGTTTCCAAGACCCACTTTGGCA...CAAGTAAACAGCCAGCCTGGGAAAGTGGGGCTTGGGGTTCTGTGAGTACCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR GCA 90 bp | TGCTTTGCTTCCAAGGTGAAGGGATTTGACCAAGATCACACAGTTGAACTTGGGGGTGTGGCTAGCAGCTaGCAGGTGTGTCCTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: CFASKVKGFDQDHTVELGGVASS*QVCPQV Trigger: CACCTGAGGACACACCTGGCAGCTGCTAGCCACACC...CCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTTCACCTTGGAAGCAAAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | TGGAAATGGAGACTACTGGCTGAAGACAGTTGTGGAAATAAGGGCCCACGCTGTCAGAGTCAGGAGTTCTaGTCCCGACCTCACAACCTG | + |
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Preference number: 2 (lower is better) Translates to: WKWRLLAEDSCGNKGPRCQSQEF*SRPHNL Trigger: CAGGTTGTGAGGTCGGGACCAGAACTCCTGACTCTG...ACAGCGTGGGCCCTTATTTCCACAACTGTCTTCAGCCAGTAGTCTCCATTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | AAGGGATTTGACCAAGATCACACAGTTGAACTTGGGCAGCTGGCCCCAGCACTTACAAGCCCTAGTCCTTaGCAAGCCTTATCCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: KGFDQDHTVELGQLAPALTSPSP*QALSRW Trigger: CCACCTGGATAAGGCTTGCCAAGGACTAGGGCTTGT...AAGTGCTGGGGCCAGCTGCCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR TCA 90 bp | GCTGAATACCTAGACCCTATTCACTGGGGAGGATGGACAGCTGTAGCCCCTTGGGTCCAATGGGGTTCTTaGAGTAAATGGGTACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: AEYLDPIHWGGWTAVAPWVQWGS*SKWVQR Trigger: TCTCTGTACCCATTTACTTCAAGAACCCCATTGGAC...CCAAGGGGCTACAGCTGTCCATCCTCCCCAGTGAATAGGGTCTAGGTATTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR GCA 90 bp | CAGAACTGCACATATCCAGCTGAATACCTAGACCCTATTCACTGGGGAGGATGGAGCCTGGCTGGACTCTaGATAGGTCTGGTAAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: QNCTYPAEYLDPIHWGGWSLAGL*IGLVSH Trigger: GTGACTTACCAGACCTATGCAGAGTCCAGCCAGGCT...CCATCCTCCCCAGTGAATAGGGTCTAGGTATTCAGCTGGATATGTGCAGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | CATAGCCTGGCTGGACTCTGCATAGGTCTGGTAAGTCACCTGAACATGACAGCTGAGTTTCTGGCCTTGTaGTCCAGAGTTAGCAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: HSLAGLCIGLVSHLNMTAEFLAL*SRVSRH Trigger: ATGCCTGCTAACTCTGGACCACAAGGCCAGAAACTC...AGCTGTCATGTTCAGGTGACTTACCAGACCTATGCAGAGTCCAGCCAGGCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAACTGCACATATCCAGCTGAATACCTAGACCCTATTCACTGGGGAGGATGGCTTTTCTCCCCTGTATaGTTACTGCCCTGGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: QNCTYPAEYLDPIHWGGWLFSPV*LLPWLR Trigger: CCTCAGCCAGGGCAGTAACCATACAGGGGAGAAAAG...CCATCCTCCCCAGTGAATAGGGTCTAGGTATTCAGCTGGATATGTGCAGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR GCA 90 bp | CTAGAAAGAGCTGATAGAACTTGTTGCTGTAACCTAGCCAGAAAACTGCTATGCGGTGTGGCTAGCAGCTaGCAGGTGTGTCCTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LERADRTCCCNLARKLLCGVASS*QVCPQV Trigger: CACCTGAGGACACACCTGGCAGCTGCTAGCCACACC...GCATAGCAGTTTTCTGGCTAGGTTACAGCAACAAGTTCTATCAGCTCTTTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCACTGGCTGTTCTGGGAGATGAGGAATTCAAAGATGAGCTCTCAGCACCTGACTACCCAGACATCTTaGTGCTTTTGGCTTACACCA | + |
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Preference number: 2 (lower is better) Translates to: PHWLFWEMRNSKMSSQHLTTQTS*CFWLTP Trigger: TGGTGTAAGCCAAAAGCACCAAGATGTCTGGGTAGT...CAGGTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCAGTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CCA 90 bp | TGGAAATGGAGACTACTGGCTGAAGACAGTTGTGGAAATAAGGGCCCACGCTGTTGCCAAAGTGGGTCTTaGAAACTGCACACTACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: WKWRLLAEDSCGNKGPRCCQSGS*KLHTTQ Trigger: CTGGGTAGTGTGCAGTTTCCAAGACCCACTTTGGCA...ACAGCGTGGGCCCTTATTTCCACAACTGTCTTCAGCCAGTAGTCTCCATTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGATTTGACCAAGATCACACAGTTGAACTTGGGCAGCTGGCCCCAGCACTTATGTTCCATTCAGAATaGAGTCCATTCGATGACGGG | + |
|
Preference number: 2 (lower is better) Translates to: KGFDQDHTVELGQLAPALMFHSE*SPFDDG Trigger: CCCGTCATCGAATGGACTGCATTCTGAATGGAACAT...AAGTGCTGGGGCCAGCTGCCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGATTTGACCAAGATCACACAGTTGAACTTGGGCAGCTGGCCCCAGCACTTACTACCCAGACATCTTaGTGCTTTTGGCTTACACCA | + |
|
Preference number: 2 (lower is better) Translates to: KGFDQDHTVELGQLAPALTTQTS*CFWLTP Trigger: TGGTGTAAGCCAAAAGCACCAAGATGTCTGGGTAGT...AAGTGCTGGGGCCAGCTGCCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CCA 90 bp | CTAGAAAGAGCTGATAGAACTTGTTGCTGTAACCTAGCCAGAAAACTGCTATGCTTAAGCCCATGCCCCTaGAGCAGCCCAGGCTATCCA | + |
|
Preference number: 2 (lower is better) Translates to: LERADRTCCCNLARKLLCLSPCP*SSPGYP Trigger: TGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTTAA...GCATAGCAGTTTTCTGGCTAGGTTACAGCAACAAGTTCTATCAGCTCTTTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CCA 90 bp | TCCCCATTTTCACATAGCAGCACTGTCAGGAACCTCTTCCAGATAAATAGGTCCGAGTTTCTGGCCTTGTaGTCCAGAGTTAGCAGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: SPFSHSSTVRNLFQINRSEFLAL*SRVSRH Trigger: ATGCCTGCTAACTCTGGACCACAAGGCCAGAAACTC...GGACCTATTTATCTGGAAGAGGTTCCTGACAGTGCTGCTATGTGAAAATGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTGTTCTGGGAGATGAGGAATTCAAAGATGAGCTCTCAGCACCTGCGCTCCGCTAAAGCCCTTTTCTaGTCTTTGGGAAAAGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: WLFWEMRNSKMSSQHLRSAKALF*SLGKVF Trigger: AAAGACTTTTCCCAAAGACCAGAAAAGGGCTTTAGC...GGAGCGCAGGTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTATCCATCAGTCAGGCATCCTGTGCTCATAATATTAAGCCTGGAAATGGAACAAGCCCTAGTCCTTaGCAAGCCTTATCCAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: RLSISQASCAHNIKPGNGTSPSP*QALSRW Trigger: CCACCTGGATAAGGCTTGCCAAGGACTAGGGCTTGT...TCCATTTCCAGGCTTAATATTATGAGCACAGGATGCCTGACTGATGGATAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTGTTCTGGGAGATGAGGAATTCAAAGATGAGCTCTCAGCACCTGCGCTCCACATCTTGGTGCTTTTaGCTTACACCAAACAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: WLFWEMRNSKMSSQHLRSTSWCF*LTPNKR Trigger: CCTTTTGTTTGGTGTAAGCCAAAAGCACCAAGATGT...GGAGCGCAGGTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR TCA 90 bp | CTAGAAAGAGCTGATAGAACTTGTTGCTGTAACCTAGCCAGAAAACTGCTATGCTTATCCAGGTGGGATTaGCAGCAGAACCCTAGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LERADRTCCCNLARKLLCLSRWD*QQNPRG Trigger: CCCTCTAGGGTTCTGCTGTCAATCCCACCTGGATAA...GCATAGCAGTTTTCTGGCTAGGTTACAGCAACAAGTTCTATCAGCTCTTTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR GCA 90 bp | AAATGGGTACAGAGAGAAGAGTTTCTGGCCTTGTGGTCCAGAGTTAGCAGGCATATGTTCCATTCAGAATaGAGTCCATTCGATGACGGG | + |
|
Preference number: 2 (lower is better) Translates to: KWVQREEFLALWSRVSRHMFHSE*SPFDDG Trigger: CCCGTCATCGAATGGACTGCATTCTGAATGGAACAT...ATGCCTGCTAACTCTGGACCACAAGGCCAGAAACTCTTCTCTCTGTACCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTATCCATCAGTCAGGCATCCTGTGCTCATAATATTAAGCCTGGAAATGGAACATCTTGGTGCTTTTaGCTTACACCAAACAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: RLSISQASCAHNIKPGNGTSWCF*LTPNKR Trigger: CCTTTTGTTTGGTGTAAGCCAAAAGCACCAAGATGT...TCCATTTCCAGGCTTAATATTATGAGCACAGGATGCCTGACTGATGGATAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCCATGGTTATCCTACAGAGGAGGGTGTGGCTAGCAGCTGCCAGGTGTGTCGCCGACATCTATGGCTaGTCTGACCTTCCCTGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: GPMVILQRRVWLAAARCVADIYG*SDLPCL Trigger: TAGGCAGGGAAGGTCAGACAAGCCATAGATGTCGGC...GACACACCTGGCAGCTGCTAGCCACACCCTCCTCTGTAGGATAACCATGGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR GCA 72 bp | CATGGTTATCCTACAGAGGAGGGTGTGGCTAGCAGCTaGCAGGTGTGTCCTCAGGTGAGGCAGCAAGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: HGYPTEEGVASS*QVCPQVRQQGK Trigger: CTTGCCTTGCTGCCTCACCTGAGGACACACCTGGCAGCTGCTAGCCACACCCTCCTCTGTAGGATAACCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR TCA 72 bp | AGCCCTAGTCCTTGGCAAGCCTTATCCAGGTGGGATTaGCAGCAGAACCCTAGAGGGCCTGTCCTCCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SPSPWQALSRWD*QQNPRGPVLQS Trigger: ACTCTGGAGGACAGGCCCTCTAGGGTTCTGCTGTCAATCCCACCTGGATAAGGCTTGCCAAGGACTAGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR CCA 72 bp | CGGCCAGGTTTTAGCATGTGTTTAAGCCCATGCCCCTaGAGCAGCCCAGGCTATCCATCAGTCAGGCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: RPGFSMCLSPCP*SSPGYPSVRHP Trigger: AGGATGCCTGACTGATGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTTAAACACATGCTAAAACCTGGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR CCA 72 bp | CCAGCTGAATACCTAGACCCTATTCACTGGGGAGGATaGACAGCTGTAGCCCCTTGGTCCCAGACATGGACA | + |
|
Preference number: 3 (lower is better) Translates to: PAEYLDPIHWGG*TAVAPWSQTWT Trigger: TGTCCATGTCTGGGACCAAGGGGCTACAGCTGTCCATCCTCCCCAGTGAATAGGGTCTAGGTATTCAGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGCATGTGTTTAAGCCCATGCCCCTGGAGCAGCCCAGGCTATCCATCAGTCGCCGACATCTATGGCTaGTCTGACCTTCCCTGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: FSMCLSPCPWSSPGYPSVADIYG*SDLPCL Trigger: TAGGCAGGGAAGGTCAGACAAGCCATAGATGTCGGC...GACTGATGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTTAAACACATGCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR GCA 72 bp | GCAGCAAGGCAAGGTAAGTGGCTATTAAGGGGCACGTaGAGAGGAGGAAATGTCCCTGCTGCCGACATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: AARQGKWLLRGT*RGGNVPAADIY Trigger: ATAGATGTCGGCAGCAGGGACATTTCCTCCTCTGCACGTGCCCCTTAATAGCCACTTACCTTGCCTTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR CCA 72 bp | GGTGTACCGGGCTGTTACTGTCCCCACTGGCTGTTCTaGGAGATGAGGAATTCAAAGATGAGCTCTCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GVPGCYCPHWLF*EMRNSKMSSQH Trigger: GTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCAGTGGGGACAGTAACAGCCCGGTACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR CCA 72 bp | CAGATAGCAGGTGTACCGGGCTGTTACTGTCCCCACTaGCTGTTCTGGGAGATGAGGAATTCAAAGATGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QIAGVPGCYCPH*LFWEMRNSKMS Trigger: GCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCAGTGGGGACAGTAACAGCCCGGTACACCTGCTATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCCATGGTTATCCTACAGAGGAGGGTGTGGCTAGCAGCTGCCAGGTGTGTCAAGTCTTTTATGTTTTaGTTCCCTCTTCCCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GPMVILQRRVWLAAARCVKSFMF*FPLPFR Trigger: CCTGAAGGGAAGAGGGAACAAAAACATAAAAGACTT...GACACACCTGGCAGCTGCTAGCCACACCCTCCTCTGTAGGATAACCATGGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGATTTGACCAAGATCACACAGTTGAACTTGGGCAGCTGGCCCCAGCACTTCACTACCCAGACATCTaGGTGCTTTTGGCTTACACC | + |
|
Preference number: 3 (lower is better) Translates to: KGFDQDHTVELGQLAPALHYPDI*VLLAYT Trigger: GGTGTAAGCCAAAAGCACCAAGATGTCTGGGTAGTG...AAGTGCTGGGGCCAGCTGCCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR TCA 72 bp | CTCAGTCCTTCCAGGTCAGAACTGCACATATCCAGCTaGATACCTAGACCCTATTCACTGGGGAGGATGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LSPSRSELHISS*IPRPYSLGRMD Trigger: GTCCATCCTCCCCAGTGAATAGGGTCTAGGTATTCAGCTGGATATGTGCAGTTCTGACCTGGAAGGACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR GCA 72 bp | TTGGCTCTTAGACCCCCGTTCACTTCCAAGGTGGCATaGTGCTTTGCTTCCAAGGTGAAGGGATTTGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: LALRPPFTSKVA*CFASKVKGFDQ Trigger: TTGGTCAAATCCCTTCACCTTGGAAGCAAAGCAGCATGCCACCTTGGAAGTGAACGGGGGTCTAAGAGCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTTGCTTCCAAGGTGAAGGGATTTGACCAAGATCACACAGTTGAACTTGGGAGCTGGCCCCAGCACTaGCATCTGTTCTCAGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: CFASKVKGFDQDHTVELGSWPQH*HLFSED Trigger: GTCTTCTGAGAACAGATGCAAGTGCTGGGGCCAGCT...CCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTTCACCTTGGAAGCAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR GCA 72 bp | GCCTATGAAGCTAGGCTGAAGAAAACCAAAGAGCCTTaGGAAACCTGTCCTCAGTCCTTCCAGGTCAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: AYEARLKKTKEP*ETCPQSFQVRT Trigger: AGTTCTGACCTGGAAGGACTGAGGACAGGTTTCGCAAGGCTCTTTGGTTTTCTTCAGCCTAGCTTCATAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| 3UTR-3UTR CAA 90 bp | TGGAAATGGAGACTACTGGCTGAAGACAGTTGTGGAAATAAGGGCCCACGCTGTGGGACACTGAACACATaGAAAGGGCAAGATTTACCC | + |
|
Preference number: 3 (lower is better) Translates to: WKWRLLAEDSCGNKGPRCGTLNT*KGQDLP Trigger: GGGTAAATCTTGCCCTTTCAATGTGTTCAGTGTCCC...ACAGCGTGGGCCCTTATTTCCACAACTGTCTTCAGCCAGTAGTCTCCATTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGATTTGACCAAGATCACACAGTTGAACTTGGGCAGCTGGCCCCAGCACTTAAGTCTTTTATGTTTTaGTTCCCTCTTCCCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KGFDQDHTVELGQLAPALKSFMF*FPLPFR Trigger: CCTGAAGGGAAGAGGGAACAAAAACATAAAAGACTT...AAGTGCTGGGGCCAGCTGCCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTGTTCTGGGAGATGAGGAATTCAAAGATGAGCTCTCAGCACCTGCGCTCCAGATACAAATCTGAATaGTGTAAGACTCAGGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: WLFWEMRNSKMSSQHLRSRYKSE*CKTQDP Trigger: AGGATCCTGAGTCTTACACAATTCAGATTTGTATCT...GGAGCGCAGGTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAATGGAGACTACTGGCTGAAGACAGTTGTGGAAATAAGGGCCCACGCTGTGACATCTTGGTGCTTTaGGCTTACACCAAACAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: WKWRLLAEDSCGNKGPRCDILVL*AYTKQK Trigger: CTTTTGTTTGGTGTAAGCCAAAAGCACCAAGATGTC...ACAGCGTGGGCCCTTATTTCCACAACTGTCTTCAGCCAGTAGTCTCCATTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR TCA 72 bp | TCACTTCCAAGGTGGCATGCTGCTTTGCTTCCAAGGTaGAGGGATTTGACCAAGATCACACAGTTGAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: SLPRWHAALLPR*RDLTKITQLNL Trigger: CAAGTTCAACTGTGTGATCTTGGTCAAATCCCTTCACCTTGGAAGCAAAGCAGCATGCCACCTTGGAAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR CCA 72 bp | TCACAGTCCATAGTGGGCACAGGTCTCAGTTCAGTGTaGCTTTACCCAAGAGGCTATATGTTTCCTAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SQSIVGTGLSSV*LYPRGYMFPSC Trigger: ACAACTAGGAAACATATAGCCTCTTGGGTAAAGCCACACTGAACTGAGACCTGTGCCCACTATGGACTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR CCA 72 bp | AGTGGGTCTTGGAAACTGCACACTACCCAGACATCTTaGTGCTTTTGGCTTACACCAAACAAAAGGACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SGSWKLHTTQTS*CFWLTPNKRTD Trigger: ATCTGTCCTTTTGTTTGGTGTAAGCCAAAAGCACCAAGATGTCTGGGTAGTGTGCAGTTTCCAAGACCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR CCA 72 bp | TGTGCTCATAATATTAAGCCTGGAAATGGAGACTACTaGCTGAAGACAGTTGTGGAAATAAGGGCCCACGCT | + |
|
Preference number: 3 (lower is better) Translates to: CAHNIKPGNGDY*LKTVVEIRAHA Trigger: AGCGTGGGCCCTTATTTCCACAACTGTCTTCAGCCAGTAGTCTCCATTTCCAGGCTTAATATTATGAGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR GCA 72 bp | TTGGATCTAAATGTTGCCAAAGTGGGTCTTGGAAACTaGACACTACCCAGACATCTTGGTGCTTTTGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LDLNVAKVGLGN*TLPRHLGAFGL Trigger: TAAGCCAAAAGCACCAAGATGTCTGGGTAGTGTGCAGTTTCCAAGACCCACTTTGGCAACATTTAGATCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR CCA 72 bp | GTTCTTGAAGTAAATGGGTACAGAGAGAAGAGTTTCTaGCCTTGTGGTCCAGAGTTAGCAGGCATTATATCA | + |
|
Preference number: 3 (lower is better) Translates to: VLEVNGYREKSF*PCGPELAGIIS Trigger: TGATATAATGCCTGCTAACTCTGGACCACAAGGCCAGAAACTCTTCTCTCTGTACCCATTTACTTCAAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR CCA 72 bp | TGGAAACTGCACACTACCCAGACATCTTGGTGCTTTTaGCTTACACCAAACAAAAGGACAGATACAAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: WKLHTTQTSWCF*LTPNKRTDTNL Trigger: CAGATTTGTATCTGTCCTTTTGTTTGGTGTAAGCCAAAAGCACCAAGATGTCTGGGTAGTGTGCAGTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR-3UTR CAA 90 bp | CTAGAAAGAGCTGATAGAACTTGTTGCTGTAACCTAGCCAGAAAACTGCTATGCAAGTCTTTTATGTTTTaGTTCCCTCTTCCCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LERADRTCCCNLARKLLCKSFMF*FPLPFR Trigger: CCTGAAGGGAAGAGGGAACAAAAACATAAAAGACTT...GCATAGCAGTTTTCTGGCTAGGTTACAGCAACAAGTTCTATCAGCTCTTTCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | GAGGAGGGTGTGGCTAGCAGCTGCCAGGTGTGTCCTCAGGTGAGGCAGCAAGGCTCGGGGAACACGTGGTaGTTCAGAGCGGTGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EEGVASSCQVCPQVRQQGSGNTW*FRAVSI Trigger: GATGGACACCGCTCTGAACCACCACGTGTTCCCCGA...GCCTTGCTGCCTCACCTGAGGACACACCTGGCAGCTGCTAGCCACACCCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | GAGGAGGGTGTGGCTAGCAGCTGCCAGGTGTGTCCTCAGGTGAGGCAGCAAGGCTTCACTCTGCAGACATaGAGGCTTCGGGATGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EEGVASSCQVCPQVRQQGFTLQT*RLRDGA Trigger: TGCCCCATCCCGAAGCCTTCATGTCTGCAGAGTGAA...GCCTTGCTGCCTCACCTGAGGACACACCTGGCAGCTGCTAGCCACACCCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | AAGCCCATGCCCCTGGAGCAGCCCAGGCTATCCATCAGTCAGGCATCCTGTGCTCTCCCTGGAGGATGCTaGAGCAGCCTTCGCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KPMPLEQPRLSISQASCALPGGC*SSLRSC Trigger: ACAGCTGCGAAGGCTGCTCCAGCATCCTCCAGGGAG...AGCACAGGATGCCTGACTGATGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | AAGCCCATGCCCCTGGAGCAGCCCAGGCTATCCATCAGTCAGGCATCCTGTGCTGGCAGTGGCTACAGCTaGGACACCTCCCTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPMPLEQPRLSISQASCAGSGYS*DTSLED Trigger: ATCCTCCAGGGAGGTGTCCCAGCTGTAGCCACTGCC...AGCACAGGATGCCTGACTGATGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | AAGCCCATGCCCCTGGAGCAGCCCAGGCTATCCATCAGTCAGGCATCCTGTGCTGATGGAAGCGAGGAATaGGGTCCTGGAGACTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPMPLEQPRLSISQASCADGSEE*GPGDWR Trigger: CCTCCAGTCTCCAGGACCTCATTCCTCGCTTCCATC...AGCACAGGATGCCTGACTGATGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | AAGCCCATGCCCCTGGAGCAGCCCAGGCTATCCATCAGTCAGGCATCCTGTGCTCACACTCCATGGCCATaGGCTCTACTTCGTGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KPMPLEQPRLSISQASCAHTPWP*ALLREC Trigger: GCACTCACGAAGTAGAGCCCATGGCCATGGAGTGTG...AGCACAGGATGCCTGACTGATGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | GGTCCCATGGTTATCCTACAGAGGAGGGTGTGGCTAGCAGCTGCCAGGTGTGTCTCGGGGAACACGTGGTaGTTCAGAGCGGTGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GPMVILQRRVWLAAARCVSGNTW*FRAVSI Trigger: GATGGACACCGCTCTGAACCACCACGTGTTCCCCGA...GACACACCTGGCAGCTGCTAGCCACACCCTCCTCTGTAGGATAACCATGGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | GAGGAGGAAATGTCCCTGCTGCCGACATCTATGGCTTGTCTGACCTTCCCTGCCTCGGGGAACACGTGGTaGTTCAGAGCGGTGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EEEMSLLPTSMACLTFPASGNTW*FRAVSI Trigger: GATGGACACCGCTCTGAACCACCACGTGTTCCCCGA...GGCAGGGAAGGTCAGACAAGCCATAGATGTCGGCAGCAGGGACATTTCCTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | GCTGAATACCTAGACCCTATTCACTGGGGAGGATGGACAGCTGTAGCCCCTTGGAAGAGGCCCCGAGGATaGCGCCTCAGATGGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: AEYLDPIHWGGWTAVAPWKRPRG*RLRWKR Trigger: TCGCTTCCATCTGAGGCGCCATCCTCGGGGCCTCTT...CCAAGGGGCTACAGCTGTCCATCCTCCCCAGTGAATAGGGTCTAGGTATTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | GAGGAGGGTGTGGCTAGCAGCTGCCAGGTGTGTCCTCAGGTGAGGCAGCAAGGCGAGTGCAGAAGTCTTTaGTGTCCATCTCCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: EEGVASSCQVCPQVRQQGECRSL*CPSPHQ Trigger: TTGATGAGGAGATGGACATCAAAGACTTCTGCACTC...GCCTTGCTGCCTCACCTGAGGACACACCTGGCAGCTGCTAGCCACACCCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | CTTGGGTACTCACAGAACCCCAAGCCCCACTTTCCCAGGCTGGCTGTTTACTTGGATGGAAGCGAGGAATaGGGTCCTGGAGACTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGYSQNPKPHFPRLAVYLDGSEE*GPGDWR Trigger: CCTCCAGTCTCCAGGACCTCATTCCTCGCTTCCATC...CAAGTAAACAGCCAGCCTGGGAAAGTGGGGCTTGGGGTTCTGTGAGTACCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGAAATGTCCCTGCTGCCGACATCTATGGCTTGTCTGACCTTCCCTGCCGACAGGGCTGTGATCTaGACGTGGTCACACTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EEEMSLLPTSMACLTFPADRAVI*TWSHSM Trigger: CATGGAGTGTGACCACGTGCAGATCACAGCCCTGTC...GGCAGGGAAGGTCAGACAAGCCATAGATGTCGGCAGCAGGGACATTTCCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR GCA 90 bp | AAGGGATTTGACCAAGATCACACAGTTGAACTTGGGCAGCTGGCCCCAGCACTTCACCTCCCTGGAGGATaGTGGAGCAGCCTTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGFDQDHTVELGQLAPALHLPGG*WSSLRS Trigger: GCTGCGAAGGCTGCTCCAGCATCCTCCAGGGAGGTG...AAGTGCTGGGGCCAGCTGCCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | GAGGAGGAAATGTCCCTGCTGCCGACATCTATGGCTTGTCTGACCTTCCCTGCCCACACTCCATGGCCATaGGCTCTACTTCGTGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EEEMSLLPTSMACLTFPAHTPWP*ALLREC Trigger: GCACTCACGAAGTAGAGCCCATGGCCATGGAGTGTG...GGCAGGGAAGGTCAGACAAGCCATAGATGTCGGCAGCAGGGACATTTCCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | CCCCACTGGCTGTTCTGGGAGATGAGGAATTCAAAGATGAGCTCTCAGCACCTGCGAGGAATGAGGTCCTaGAGACTGGAGGGAAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PHWLFWEMRNSKMSSQHLRGMRS*RLEGRA Trigger: GGCCCTTCCCTCCAGTCTCCAGGACCTCATTCCTCG...CAGGTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCAGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGGATGTTCCATTCAGAATGCAGTCCATTCGATGACGGGCTCCGGCATCGAGGAATGAGGTCCTaGAGACTGGAGGGAAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGRMFHSECSPFDDGLRHRGMRS*RLEGRA Trigger: GGCCCTTCCCTCCAGTCTCCAGGACCTCATTCCTCG...ATGCCGGAGCCCGTCATCGAATGGACTGCATTCTGAATGGAACATCCTGCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGGATGTTCCATTCAGAATGCAGTCCATTCGATGACGGGCTCCGGCATAAGAGGCCCCGAGGATaGCGCCTCAGATGGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QGRMFHSECSPFDDGLRHKRPRG*RLRWKR Trigger: TCGCTTCCATCTGAGGCGCCATCCTCGGGGCCTCTT...ATGCCGGAGCCCGTCATCGAATGGACTGCATTCTGAATGGAACATCCTGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGGATGTTCCATTCAGAATGCAGTCCATTCGATGACGGGCTCCGGCATAGCGCTGGCAGGAACTaGCACAAAAGAGGCCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGRMFHSECSPFDDGLRHSAGRN*HKRGPE Trigger: CTCGGGGCCTCTTTTGTGCCAGTTCCTGCCAGCGCT...ATGCCGGAGCCCGTCATCGAATGGACTGCATTCTGAATGGAACATCCTGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | GAGGAGGAAATGTCCCTGCTGCCGACATCTATGGCTTGTCTGACCTTCCCTGCCAGGAACTCTGGTCATTaGACACCTTCAGCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EEEMSLLPTSMACLTFPARNSGH*TPSAGW Trigger: CCAGCCTGCTGAAGGTGTTCAATGACCAGAGTTCCT...GGCAGGGAAGGTCAGACAAGCCATAGATGTCGGCAGCAGGGACATTTCCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | AAGGGATTTGACCAAGATCACACAGTTGAACTTGGGCAGCTGGCCCCAGCACTTCTCCCTGGAGGATGCTaGAGCAGCCTTCGCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGFDQDHTVELGQLAPALLPGGC*SSLRSC Trigger: ACAGCTGCGAAGGCTGCTCCAGCATCCTCCAGGGAG...AAGTGCTGGGGCCAGCTGCCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR CAA 72 bp | CCCTATTCACTGGGGAGGATGGACAGCTGTAGCCCCTaGGTCCCAGACATGGACACACTAACTCGGGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: PYSLGRMDSCSP*VPDMDTLTRVQ Trigger: TTGTACCCGAGTTAGTGTGTCCATGTCTGGGACCAAGGGGCTACAGCTGTCCATCCTCCCCAGTGAATAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | AAGCCCATGCCCCTGGAGCAGCCCAGGCTATCCATCAGTCAGGCATCCTGTGCTGAGTGCAGAAGTCTTTaGTGTCCATCTCCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: KPMPLEQPRLSISQASCAECRSL*CPSPHQ Trigger: TTGATGAGGAGATGGACATCAAAGACTTCTGCACTC...AGCACAGGATGCCTGACTGATGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR GCA 90 bp | CAAGGCAGGATGTTCCATTCAGAATGCAGTCCATTCGATGACGGGCTCCGGCATGACAGGGCTGTGATCTaGACGTGGTCACACTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QGRMFHSECSPFDDGLRHDRAVI*TWSHSM Trigger: CATGGAGTGTGACCACGTGCAGATCACAGCCCTGTC...ATGCCGGAGCCCGTCATCGAATGGACTGCATTCTGAATGGAACATCCTGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | TTTAGCATGTGTTTAAGCCCATGCCCCTGGAGCAGCCCAGGCTATCCATCAGTCCGTGGTCACACTCCATaGCCATGGGCTCTACTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FSMCLSPCPWSSPGYPSVRGHTP*PWALLR Trigger: ACGAAGTAGAGCCCATGGCCATGGAGTGTGACCACG...GACTGATGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTTAAACACATGCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | CATAGCCTGGCTGGACTCTGCATAGGTCTGGTAAGTCACCTGAACATGACAGCTATGAAGGCTTCGGGATaGGGCAGTGGCTACAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSLAGLCIGLVSHLNMTAMKASG*GSGYSW Trigger: CCAGCTGTAGCCACTGCCCCATCCCGAAGCCTTCAT...AGCTGTCATGTTCAGGTGACTTACCAGACCTATGCAGAGTCCAGCCAGGCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | CAAGGCAGGATGTTCCATTCAGAATGCAGTCCATTCGATGACGGGCTCCGGCATAGGAACTCTGGTCATTaGACACCTTCAGCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGRMFHSECSPFDDGLRHRNSGH*TPSAGW Trigger: CCAGCCTGCTGAAGGTGTTCAATGACCAGAGTTCCT...ATGCCGGAGCCCGTCATCGAATGGACTGCATTCTGAATGGAACATCCTGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR GCA 90 bp | TCCCCATTTTCACATAGCAGCACTGTCAGGAACCTCTTCCAGATAAATAGGTCCCACCTCCCTGGAGGATaGTGGAGCAGCCTTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPFSHSSTVRNLFQINRSHLPGG*WSSLRS Trigger: GCTGCGAAGGCTGCTCCAGCATCCTCCAGGGAGGTG...GGACCTATTTATCTGGAAGAGGTTCCTGACAGTGCTGCTATGTGAAAATGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | CAGAACTGCACATATCCAGCTGAATACCTAGACCCTATTCACTGGGGAGGATGGATGAAGGCTTCGGGATaGGGCAGTGGCTACAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNCTYPAEYLDPIHWGGWMKASG*GSGYSW Trigger: CCAGCTGTAGCCACTGCCCCATCCCGAAGCCTTCAT...CCATCCTCCCCAGTGAATAGGGTCTAGGTATTCAGCTGGATATGTGCAGTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| 3UTR CAA 72 bp | AGAGGAGGAAATGTCCCTGCTGCCGACATCTATGGCTaGTCTGACCTTCCCTGCCTAACTGCCTATGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGGNVPAADIYG*SDLPCLTAYEA Trigger: AGCTTCATAGGCAGTTAGGCAGGGAAGGTCAGACAAGCCATAGATGTCGGCAGCAGGGACATTTCCTCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | TGGAAATGGAGACTACTGGCTGAAGACAGTTGTGGAAATAAGGGCCCACGCTGTCAGCAGGCTGGACACTaGGCTATCCTTCTCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: WKWRLLAEDSCGNKGPRCQQAGH*AILLYQ Trigger: CTGGTAGAGAAGGATAGCTCAGTGTCCAGCCTGCTG...ACAGCGTGGGCCCTTATTTCCACAACTGTCTTCAGCCAGTAGTCTCCATTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | GAGGAGGAAATGTCCCTGCTGCCGACATCTATGGCTTGTCTGACCTTCCCTGCCCCATCTCCTCATCAATaGAATGTCGGAAGAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EEEMSLLPTSMACLTFPAPSPHQ*NVGRSQ Trigger: CTGACTTCTTCCGACATTTCATTGATGAGGAGATGG...GGCAGGGAAGGTCAGACAAGCCATAGATGTCGGCAGCAGGGACATTTCCTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR GCA 90 bp | CAGAACTGCACATATCCAGCTGAATACCTAGACCCTATTCACTGGGGAGGATGGGGATCTCTCTGCTCTTaGCCAGCAAGGACTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QNCTYPAEYLDPIHWGGWGSLCS*PARTPG Trigger: ACCTGGAGTCCTTGCTGGGCAAGAGCAGAGAGATCC...CCATCCTCCCCAGTGAATAGGGTCTAGGTATTCAGCTGGATATGTGCAGTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | CATAGCCTGGCTGGACTCTGCATAGGTCTGGTAAGTCACCTGAACATGACAGCTCGGTCCGAGGAACTCTaGTCATTGAACACCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSLAGLCIGLVSHLNMTARSEEL*SLNTFS Trigger: GCTGAAGGTGTTCAATGACCAGAGTTCCTCGGACCG...AGCTGTCATGTTCAGGTGACTTACCAGACCTATGCAGAGTCCAGCCAGGCTATG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | TGCTTTGCTTCCAAGGTGAAGGGATTTGACCAAGATCACACAGTTGAACTTGGGGGCAGTGGCTACAGCTaGGACACCTCCCTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CFASKVKGFDQDHTVELGGSGYS*DTSLED Trigger: ATCCTCCAGGGAGGTGTCCCAGCTGTAGCCACTGCC...CCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTTCACCTTGGAAGCAAAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | TGGAAATGGAGACTACTGGCTGAAGACAGTTGTGGAAATAAGGGCCCACGCTGTAGGAACTCTGGTCATTaGACACCTTCAGCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WKWRLLAEDSCGNKGPRCRNSGH*TPSAGW Trigger: CCAGCCTGCTGAAGGTGTTCAATGACCAGAGTTCCT...ACAGCGTGGGCCCTTATTTCCACAACTGTCTTCAGCCAGTAGTCTCCATTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | AGCCCTGTGTGTAGGTTGTCAGCAGACCCTCACAGTAGCACCAATAGTCTAATTCGTGGTCACACTCCATaGCCATGGGCTCTACTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SPVCRLSADPHSSTNSLIRGHTP*PWALLR Trigger: ACGAAGTAGAGCCCATGGCCATGGAGTGTGACCACG...AATTAGACTATTGGTGCTACTGTGAGGGTCTGCTGACAACCTACACACAGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | AGGCTATCCATCAGTCAGGCATCCTGTGCTCATAATATTAAGCCTGGAAATGGAAGCGCTGGCAGGAACTaGCACAAAAGAGGCCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLSISQASCAHNIKPGNGSAGRN*HKRGPE Trigger: CTCGGGGCCTCTTTTGTGCCAGTTCCTGCCAGCGCT...TCCATTTCCAGGCTTAATATTATGAGCACAGGATGCCTGACTGATGGATAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | CTTGGGTACTCACAGAACCCCAAGCCCCACTTTCCCAGGCTGGCTGTTTACTTGATCCTGTTTTCAGGATaGTCCCGAAGAATGGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGYSQNPKPHFPRLAVYLILFSG*SRRMDR Trigger: TCTATCCATTCTTCGGGATCATCCTGAAAACAGGAT...CAAGTAAACAGCCAGCCTGGGAAAGTGGGGCTTGGGGTTCTGTGAGTACCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | AAGGGATTTGACCAAGATCACACAGTTGAACTTGGGCAGCTGGCCCCAGCACTTATGGGCTCTACTTCGTaGGTGCAGAAGTCTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KGFDQDHTVELGQLAPALMGSTS*VQKSLM Trigger: CATCAAAGACTTCTGCACTCACGAAGTAGAGCCCAT...AAGTGCTGGGGCCAGCTGCCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | TGCTTTGCTTCCAAGGTGAAGGGATTTGACCAAGATCACACAGTTGAACTTGGGTTCACTCTGCAGACATaGAGGCTTCGGGATGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CFASKVKGFDQDHTVELGFTLQT*RLRDGA Trigger: TGCCCCATCCCGAAGCCTTCATGTCTGCAGAGTGAA...CCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTTCACCTTGGAAGCAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR GCA 90 bp | TCCCCATTTTCACATAGCAGCACTGTCAGGAACCTCTTCCAGATAAATAGGTCCGGATCTCTCTGCTCTTaGCCAGCAAGGACTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPFSHSSTVRNLFQINRSGSLCS*PARTPG Trigger: ACCTGGAGTCCTTGCTGGGCAAGAGCAGAGAGATCC...GGACCTATTTATCTGGAAGAGGTTCCTGACAGTGCTGCTATGTGAAAATGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR GCA 90 bp | TGCTTTGCTTCCAAGGTGAAGGGATTTGACCAAGATCACACAGTTGAACTTGGGGACAGGGCTGTGATCTaGACGTGGTCACACTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CFASKVKGFDQDHTVELGDRAVI*TWSHSM Trigger: CATGGAGTGTGACCACGTGCAGATCACAGCCCTGTC...CCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTTCACCTTGGAAGCAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR GCA 90 bp | CAAGCCCTAGTCCTTGGCAAGCCTTATCCAGGTGGGATTGACAGCAGAACCCTATCAGTGTTTCTCGGCTaGGTAAAGGATGTTGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QALVLGKPYPGGIDSRTLSVFLG*VKDVVV Trigger: CACTACAACATCCTTTACGCAGCCGAGAAACACTGA...TAGGGTTCTGCTGTCAATCCCACCTGGATAAGGCTTGCCAAGGACTAGGGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR GCA 90 bp | TTTAGCATGTGTTTAAGCCCATGCCCCTGGAGCAGCCCAGGCTATCCATCAGTCAAAGATGTTTCACTCTaGAGACATGAAGGCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSMCLSPCPWSSPGYPSVKDVSL*RHEGFG Trigger: CCCGAAGCCTTCATGTCTGCAGAGTGAAACATCTTT...GACTGATGGATAGCCTGGGCTGCTCCAGGGGCATGGGCTTAAACACATGCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | AAAATTGCCAAGGCAGGATGTTCCATTCAGAATGCAGTCCATTCGATGACGGGCCGGTCCGAGGAACTCTaGTCATTGAACACCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIAKAGCSIQNAVHSMTGRSEEL*SLNTFS Trigger: GCTGAAGGTGTTCAATGACCAGAGTTCCTCGGACCG...GCCCGTCATCGAATGGACTGCATTCTGAATGGAACATCCTGCCTTGGCAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | TGGCTGTTCTGGGAGATGAGGAATTCAAAGATGAGCTCTCAGCACCTGCGCTCCATCCTGTTTTCAGGATaGTCCCGAAGAATGGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: WLFWEMRNSKMSSQHLRSILFSG*SRRMDR Trigger: TCTATCCATTCTTCGGGATCATCCTGAAAACAGGAT...GGAGCGCAGGTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | GGTCCCATGGTTATCCTACAGAGGAGGGTGTGGCTAGCAGCTGCCAGGTGTGTCGATGATCCCGAAGAATaGATAGAATGTCACATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GPMVILQRRVWLAAARCVDDPEE*IECHIF Trigger: AAAAATGTGACATTCTATCCATTCTTCGGGATCATC...GACACACCTGGCAGCTGCTAGCCACACCCTCCTCTGTAGGATAACCATGGGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | AGGCTATCCATCAGTCAGGCATCCTGTGCTCATAATATTAAGCCTGGAAATGGACGTGGTCACACTCCATaGCCATGGGCTCTACTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RLSISQASCAHNIKPGNGRGHTP*PWALLR Trigger: ACGAAGTAGAGCCCATGGCCATGGAGTGTGACCACG...TCCATTTCCAGGCTTAATATTATGAGCACAGGATGCCTGACTGATGGATAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | CTAGAAAGAGCTGATAGAACTTGTTGCTGTAACCTAGCCAGAAAACTGCTATGCCAGCAGGCTGGACACTaGGCTATCCTTCTCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LERADRTCCCNLARKLLCQQAGH*AILLYQ Trigger: CTGGTAGAGAAGGATAGCTCAGTGTCCAGCCTGCTG...GCATAGCAGTTTTCTGGCTAGGTTACAGCAACAAGTTCTATCAGCTCTTTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | AGCCCTGTGTGTAGGTTGTCAGCAGACCCTCACAGTAGCACCAATAGTCTAATTATGGGCTCTACTTCGTaGGTGCAGAAGTCTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SPVCRLSADPHSSTNSLIMGSTS*VQKSLM Trigger: CATCAAAGACTTCTGCACTCACGAAGTAGAGCCCAT...AATTAGACTATTGGTGCTACTGTGAGGGTCTGCTGACAACCTACACACAGGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR GCA 90 bp | TGGAAATGGAGACTACTGGCTGAAGACAGTTGTGGAAATAAGGGCCCACGCTGTTCAGTGTTTCTCGGCTaGGTAAAGGATGTTGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WKWRLLAEDSCGNKGPRCSVFLG*VKDVVV Trigger: CACTACAACATCCTTTACGCAGCCGAGAAACACTGA...ACAGCGTGGGCCCTTATTTCCACAACTGTCTTCAGCCAGTAGTCTCCATTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | AAATGGGTACAGAGAGAAGAGTTTCTGGCCTTGTGGTCCAGAGTTAGCAGGCATCCATCTCCTCATCAATaGAATGTCGGAAGAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KWVQREEFLALWSRVSRHPSPHQ*NVGRSQ Trigger: CTGACTTCTTCCGACATTTCATTGATGAGGAGATGG...ATGCCTGCTAACTCTGGACCACAAGGCCAGAAACTCTTCTCTCTGTACCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | AAAATTGCCAAGGCAGGATGTTCCATTCAGAATGCAGTCCATTCGATGACGGGCGAGTGCAGAAGTCTTTaGTGTCCATCTCCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: KIAKAGCSIQNAVHSMTGECRSL*CPSPHQ Trigger: TTGATGAGGAGATGGACATCAAAGACTTCTGCACTC...GCCCGTCATCGAATGGACTGCATTCTGAATGGAACATCCTGCCTTGGCAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR GCA 90 bp | AGCCCTGTGTGTAGGTTGTCAGCAGACCCTCACAGTAGCACCAATAGTCTAATTAAAGATGTTTCACTCTaGAGACATGAAGGCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPVCRLSADPHSSTNSLIKDVSL*RHEGFG Trigger: CCCGAAGCCTTCATGTCTGCAGAGTGAAACATCTTT...AATTAGACTATTGGTGCTACTGTGAGGGTCTGCTGACAACCTACACACAGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | TGCTTTGCTTCCAAGGTGAAGGGATTTGACCAAGATCACACAGTTGAACTTGGGCCATCTCCTCATCAATaGAATGTCGGAAGAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CFASKVKGFDQDHTVELGPSPHQ*NVGRSQ Trigger: CTGACTTCTTCCGACATTTCATTGATGAGGAGATGG...CCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTTCACCTTGGAAGCAAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | AGGCTATCCATCAGTCAGGCATCCTGTGCTCATAATATTAAGCCTGGAAATGGAATGGGCTCTACTTCGTaGGTGCAGAAGTCTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RLSISQASCAHNIKPGNGMGSTS*VQKSLM Trigger: CATCAAAGACTTCTGCACTCACGAAGTAGAGCCCAT...TCCATTTCCAGGCTTAATATTATGAGCACAGGATGCCTGACTGATGGATAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR GCA 90 bp | TCCCCATTTTCACATAGCAGCACTGTCAGGAACCTCTTCCAGATAAATAGGTCCTCAGTGTTTCTCGGCTaGGTAAAGGATGTTGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPFSHSSTVRNLFQINRSSVFLG*VKDVVV Trigger: CACTACAACATCCTTTACGCAGCCGAGAAACACTGA...GGACCTATTTATCTGGAAGAGGTTCCTGACAGTGCTGCTATGTGAAAATGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTGTTCTGGGAGATGAGGAATTCAAAGATGAGCTCTCAGCACCTGCGCTCCGATGATCCCGAAGAATaGATAGAATGTCACATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WLFWEMRNSKMSSQHLRSDDPEE*IECHIF Trigger: AAAAATGTGACATTCTATCCATTCTTCGGGATCATC...GGAGCGCAGGTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR TCA 90 bp | AGGCTATCCATCAGTCAGGCATCCTGTGCTCATAATATTAAGCCTGGAAATGGAATCCTGTTTTCAGGATaGTCCCGAAGAATGGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLSISQASCAHNIKPGNGILFSG*SRRMDR Trigger: TCTATCCATTCTTCGGGATCATCCTGAAAACAGGAT...TCCATTTCCAGGCTTAATATTATGAGCACAGGATGCCTGACTGATGGATAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CCA 90 bp | CTAGAAAGAGCTGATAGAACTTGTTGCTGTAACCTAGCCAGAAAACTGCTATGCGATGATCCCGAAGAATaGATAGAATGTCACATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LERADRTCCCNLARKLLCDDPEE*IECHIF Trigger: AAAAATGTGACATTCTATCCATTCTTCGGGATCATC...GCATAGCAGTTTTCTGGCTAGGTTACAGCAACAAGTTCTATCAGCTCTTTCTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS GCA 90 bp | TTCGGGATGGGGCAGTGGCTACAGCTGGGACACCTCCCTGGAGGATaGTGGAGCAGCCTTCGCAGCTGTGAACAGGCCACCAAGGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: FGMGQWLQLGHLPGG*WSSLRSCEQATKGD Trigger: ATCGCCCTTGGTGGCCTGTTCACAGCTGCGAAGGCTGCTCCAGCATCCTCCAGGGAGGTGTCCCAGCTGTAGCCACTGCCCCATCCCGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS CCA 90 bp | CACTCTGCAGACATGAAGGCTTCGGGATGGGGCAGTGGCTACAGCTaGGACACCTCCCTGGAGGATGCTGGAGCAGCCTTCGCAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HSADMKASGWGSGYS*DTSLEDAGAAFAAV Trigger: CACAGCTGCGAAGGCTGCTCCAGCATCCTCCAGGGAGGTGTCCCAGCTGTAGCCACTGCCCCATCCCGAAGCCTTCATGTCTGCAGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS CCA 90 bp | GTTTCACTCAGCCAGCCACAAGCATCAGGACTTAGAGTTGGTGCCTaGGGACCACCTAGGGTGGCCACGAGGCAGCAAGGATCAGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VSLSQPQASGLRVGA*GPPRVATRQQGSVP Trigger: CGGGACTGATCCTTGCTGCCTCGTGGCCACCCTAGGTGGTCCCCAGGCACCAACTCTAAGTCCTGATGCTTGTGGCTGGCTGAGTGAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148371.8 |
||
| CDS GCA 90 bp | GGTGTCCATCTCGTCGACGTACTCTACCTGCAGAGCAATGTTGAGTaGCTGCGACAGGGCTGTGATCTGCACGTGGTCACACTCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: GVHLVDVLYLQSNVE*LRQGCDLHVVTLHG Trigger: GCCATGGAGTGTGACCACGTGCAGATCACAGCCCTGTCGCAGGCACTCAACATTGCTCTGCAGGTAGAGTACGTCGACGAGATGGACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS GCA 90 bp | ACGTGGTGGTTCAGAGCGGTGTCCATCTCGTCGACGTACTCTACCTaGAGAGCAATGTTGAGTGCCTGCGACAGGGCTGTGATCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: TWWFRAVSISSTYST*RAMLSACDRAVICT Trigger: CGTGCAGATCACAGCCCTGTCGCAGGCACTCAACATTGCTCTGCAGGTAGAGTACGTCGACGAGATGGACACCGCTCTGAACCACCACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGGTGTGGCTAGCAGCTGCCAGGTGTGTCCTCAGGTGAGGCAGCAAGGCACACGCTCTTTGAACTaGAGGATCTCTCTGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EEGVASSCQVCPQVRQQGTRSLN*RISLLL Trigger: CAAGAGCAGAGAGATCCTCAAGTTCAAAGAGCGTGT...GCCTTGCTGCCTCACCTGAGGACACACCTGGCAGCTGCTAGCCACACCCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGAAATGTCCCTGCTGCCGACATCTATGGCTTGTCTGACCTTCCCTGCCACCTGCAGAGCAATGTaGAGTGCCTGCGACAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EEEMSLLPTSMACLTFPATCRAM*SACDRA Trigger: AGCCCTGTCGCAGGCACTCAACATTGCTCTGCAGGT...GGCAGGGAAGGTCAGACAAGCCATAGATGTCGGCAGCAGGGACATTTCCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS GCA 90 bp | TCCATCTCGTCGACGTACTCTACCTGCAGAGCAATGTTGAGTGCCTaGGACAGGGCTGTGATCTGCACGTGGTCACACTCCATGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SISSTYSTCRAMLSA*DRAVICTWSHSMAM Trigger: CATGGCCATGGAGTGTGACCACGTGCAGATCACAGCCCTGTCGCAGGCACTCAACATTGCTCTGCAGGTAGAGTACGTCGACGAGATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | CTTGGGTACTCACAGAACCCCAAGCCCCACTTTCCCAGGCTGGCTGTTTACTTGACCTGCAGAGCAATGTaGAGTGCCTGCGACAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGYSQNPKPHFPRLAVYLTCRAM*SACDRA Trigger: AGCCCTGTCGCAGGCACTCAACATTGCTCTGCAGGT...CAAGTAAACAGCCAGCCTGGGAAAGTGGGGCTTGGGGTTCTGTGAGTACCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS GCA 90 bp | TCAGCTCGGTTCCTGATGAAGGCCGACGTGAGGAGGCGTAAGAACTaGACGATTCGGTCCGAGGAACTCTGGTCATTGAACACCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SARFLMKADVRRRKN*TIRSEELWSLNTFS Trigger: GCTGAAGGTGTTCAATGACCAGAGTTCCTCGGACCGAATCGTGCAGTTCTTACGCCTCCTCACGTCGGCCTTCATCAGGAACCGAGCTGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | CCCCACTGGCTGTTCTGGGAGATGAGGAATTCAAAGATGAGCTCTCAGCACCTGAGGATCTCTCTGCTCTaGCCCAGCAAGGACTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PHWLFWEMRNSKMSSQHLRISLL*PSKDSR Trigger: CCTGGAGTCCTTGCTGGGCAAGAGCAGAGAGATCCT...CAGGTGCTGAGAGCTCATCTTTGAATTCCTCATCTCCCAGAACAGCCAGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS CCA 90 bp | GACGTGAGGAGGCGTAAGAACTGCACGATTCGGTCCGAGGAACTCTaGTCATTGAACACCTTCAGCAGGCTGGACACTGAGCTATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DVRRRKNCTIRSEEL*SLNTFSRLDTELSF Trigger: GAAGGATAGCTCAGTGTCCAGCCTGCTGAAGGTGTTCAATGACCAGAGTTCCTCGGACCGAATCGTGCAGTTCTTACGCCTCCTCACGTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | CAAGCCCTAGTCCTTGGCAAGCCTTATCCAGGTGGGATTGACAGCAGAACCCTACAGCCAGAAGGTCATTaGGGGTCTGTAGCACACGCT | + |
|
Preference number: 5 (lower is better) Translates to: QALVLGKPYPGGIDSRTLQPEGH*GSVAHA Trigger: AGCGTGTGCTACAGACCCCAAATGACCTTCTGGCTG...TAGGGTTCTGCTGTCAATCCCACCTGGATAAGGCTTGCCAAGGACTAGGGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS TCA 90 bp | GGAGGCGTAAGAACTGCACGATTCGGTCCGAGGAACTCTGGTCATTaGACACCTTCAGCAGGCTGGACACTGAGCTATCCTTCTCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: GGVRTARFGPRNSGH*TPSAGWTLSYPSLP Trigger: TGGTAGAGAAGGATAGCTCAGTGTCCAGCCTGCTGAAGGTGTTCAATGACCAGAGTTCCTCGGACCGAATCGTGCAGTTCTTACGCCTCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS CCA 90 bp | GGATGTTGTAGTGGGATGTTTTATAGAGCAGATAAACCGAAGGGATaGCAGCCTCGGGGAACACGTGGTGGTTCAGAGCGGTGTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GCCSGMFYRADKPKG*QPRGTRGGSERCPS Trigger: AGATGGACACCGCTCTGAACCACCACGTGTTCCCCGAGGCTGCCATCCCTTCGGTTTATCTGCTCTATAAAACATCCCACTACAACATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | GCTGAATACCTAGACCCTATTCACTGGGGAGGATGGACAGCTGTAGCCCCTTGGTGTAGCACACGCTCTTaGAACTTGAGGATCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AEYLDPIHWGGWTAVAPWCSTRS*NLRISL Trigger: CAGAGAGATCCTCAAGTTCAAAGAGCGTGTGCTACA...CCAAGGGGCTACAGCTGTCCATCCTCCCCAGTGAATAGGGTCTAGGTATTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGAAATGTCCCTGCTGCCGACATCTATGGCTTGTCTGACCTTCCCTGCCAAGAAGTTTCTGAACTaGTGTTCCTCAAAGCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EEEMSLLPTSMACLTFPAKKFLN*CSSKPA Trigger: TGCCGGCTTTGAGGAACACAAGTTCAGAAACTTCTT...GGCAGGGAAGGTCAGACAAGCCATAGATGTCGGCAGCAGGGACATTTCCTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | AAAATTGCCAAGGCAGGATGTTCCATTCAGAATGCAGTCCATTCGATGACGGGCACCTGCAGAGCAATGTaGAGTGCCTGCGACAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KIAKAGCSIQNAVHSMTGTCRAM*SACDRA Trigger: AGCCCTGTCGCAGGCACTCAACATTGCTCTGCAGGT...GCCCGTCATCGAATGGACTGCATTCTGAATGGAACATCCTGCCTTGGCAATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | TGCTTTGCTTCCAAGGTGAAGGGATTTGACCAAGATCACACAGTTGAACTTGGGAGGATCTCTCTGCTCTaGCCCAGCAAGGACTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CFASKVKGFDQDHTVELGRISLL*PSKDSR Trigger: CCTGGAGTCCTTGCTGGGCAAGAGCAGAGAGATCCT...CCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTTCACCTTGGAAGCAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | CAAGGCAGGATGTTCCATTCAGAATGCAGTCCATTCGATGACGGGCTCCGGCATACACGCTCTTTGAACTaGAGGATCTCTCTGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QGRMFHSECSPFDDGLRHTRSLN*RISLLL Trigger: CAAGAGCAGAGAGATCCTCAAGTTCAAAGAGCGTGT...ATGCCGGAGCCCGTCATCGAATGGACTGCATTCTGAATGGAACATCCTGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | CAAGGCAGGATGTTCCATTCAGAATGCAGTCCATTCGATGACGGGCTCCGGCATTGTAGCACACGCTCTTaGAACTTGAGGATCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGRMFHSECSPFDDGLRHCSTRS*NLRISL Trigger: CAGAGAGATCCTCAAGTTCAAAGAGCGTGTGCTACA...ATGCCGGAGCCCGTCATCGAATGGACTGCATTCTGAATGGAACATCCTGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | CTTGGGTACTCACAGAACCCCAAGCCCCACTTTCCCAGGCTGGCTGTTTACTTGATCGAGGTGAATCTTTaGCTGAGTTCCTGGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGYSQNPKPHFPRLAVYLIEVNL*LSSWIF Trigger: GAAAATCCAGGAACTCAGCAAAAGATTCACCTCGAT...CAAGTAAACAGCCAGCCTGGGAAAGTGGGGCTTGGGGTTCTGTGAGTACCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | TGCTTTGCTTCCAAGGTGAAGGGATTTGACCAAGATCACACAGTTGAACTTGGGCAGCCAGAAGGTCATTaGGGGTCTGTAGCACACGCT | + |
|
Preference number: 5 (lower is better) Translates to: CFASKVKGFDQDHTVELGQPEGH*GSVAHA Trigger: AGCGTGTGCTACAGACCCCAAATGACCTTCTGGCTG...CCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTTCACCTTGGAAGCAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | AAAATTGCCAAGGCAGGATGTTCCATTCAGAATGCAGTCCATTCGATGACGGGCTGTAGCACACGCTCTTaGAACTTGAGGATCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KIAKAGCSIQNAVHSMTGCSTRS*NLRISL Trigger: CAGAGAGATCCTCAAGTTCAAAGAGCGTGTGCTACA...GCCCGTCATCGAATGGACTGCATTCTGAATGGAACATCCTGCCTTGGCAATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | CTAGAAAGAGCTGATAGAACTTGTTGCTGTAACCTAGCCAGAAAACTGCTATGCCAGCCAGAAGGTCATTaGGGGTCTGTAGCACACGCT | + |
|
Preference number: 5 (lower is better) Translates to: LERADRTCCCNLARKLLCQPEGH*GSVAHA Trigger: AGCGTGTGCTACAGACCCCAAATGACCTTCTGGCTG...GCATAGCAGTTTTCTGGCTAGGTTACAGCAACAAGTTCTATCAGCTCTTTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | CAGAACTGCACATATCCAGCTGAATACCTAGACCCTATTCACTGGGGAGGATGGATCGAGGTGAATCTTTaGCTGAGTTCCTGGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QNCTYPAEYLDPIHWGGWIEVNL*LSSWIF Trigger: GAAAATCCAGGAACTCAGCAAAAGATTCACCTCGAT...CCATCCTCCCCAGTGAATAGGGTCTAGGTATTCAGCTGGATATGTGCAGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | TCCCCATTTTCACATAGCAGCACTGTCAGGAACCTCTTCCAGATAAATAGGTCCACACGCTCTTTGAACTaGAGGATCTCTCTGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPFSHSSTVRNLFQINRSTRSLN*RISLLL Trigger: CAAGAGCAGAGAGATCCTCAAGTTCAAAGAGCGTGT...GGACCTATTTATCTGGAAGAGGTTCCTGACAGTGCTGCTATGTGAAAATGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | AAAATTGCCAAGGCAGGATGTTCCATTCAGAATGCAGTCCATTCGATGACGGGCAAGAAGTTTCTGAACTaGTGTTCCTCAAAGCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KIAKAGCSIQNAVHSMTGKKFLN*CSSKPA Trigger: TGCCGGCTTTGAGGAACACAAGTTCAGAAACTTCTT...GCCCGTCATCGAATGGACTGCATTCTGAATGGAACATCCTGCCTTGGCAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
||
| CDS-3UTR CAA 90 bp | TGCTTTGCTTCCAAGGTGAAGGGATTTGACCAAGATCACACAGTTGAACTTGGGATCGAGGTGAATCTTTaGCTGAGTTCCTGGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CFASKVKGFDQDHTVELGIEVNL*LSSWIF Trigger: GAAAATCCAGGAACTCAGCAAAAGATTCACCTCGAT...CCCAAGTTCAACTGTGTGATCTTGGTCAAATCCCTTCACCTTGGAAGCAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS-3UTR CAA 90 bp | AGGCTATCCATCAGTCAGGCATCCTGTGCTCATAATATTAAGCCTGGAAATGGAAAGAAGTTTCTGAACTaGTGTTCCTCAAAGCCGGCA | + |
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Preference number: 5 (lower is better) Translates to: RLSISQASCAHNIKPGNGKKFLN*CSSKPA Trigger: TGCCGGCTTTGAGGAACACAAGTTCAGAAACTTCTT...TCCATTTCCAGGCTTAATATTATGAGCACAGGATGCCTGACTGATGGATAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS TCA 90 bp | GATCCCGAAGAATGGATAGAATGTCACATTTTTCTGATATTAGGTTaGAAGATGTTTCACTCTGCAGACATGAAGGCTTCGGGATGGGGC | + |
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Preference number: 5 (lower is better) Translates to: DPEEWIECHIFLILG*KMFHSADMKASGWG Trigger: GCCCCATCCCGAAGCCTTCATGTCTGCAGAGTGAAACATCTTTCAACCTAATATCAGAAAAATGTGACATTCTATCCATTCTTCGGGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS TCA 90 bp | GATCCCGAAGAATGGATAGAATGTCACATTTTTCTGATATTAGGTTaGAAGATGTTTCACTCAGCCAGCCACAAGCATCAGGACTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: DPEEWIECHIFLILG*KMFHSASHKHQDLE Trigger: CTCTAAGTCCTGATGCTTGTGGCTGGCTGAGTGAAACATCTTTCAACCTAATATCAGAAAAATGTGACATTCTATCCATTCTTCGGGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148371.8 |
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| CDS GCA 72 bp | GGGCAGTGGCTACAGCTGGGACACCTCCCTGGAGGATaGTGGAGCAGCCTTCGCAGCTGTGAACAGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: GQWLQLGHLPGG*WSSLRSCEQAT Trigger: GGTGGCCTGTTCACAGCTGCGAAGGCTGCTCCAGCATCCTCCAGGGAGGTGTCCCAGCTGTAGCCACTGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS CCA 72 bp | CAGGACTTAGAGTTGGTGCCTGGGGACCACCTAGGGTaGCCACGAGGCAGCAAGGATCAGTCCCGGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: QDLELVPGDHLG*PRGSKDQSRAG Trigger: TCCAGCCCGGGACTGATCCTTGCTGCCTCGTGGCCACCCTAGGTGGTCCCCAGGCACCAACTCTAAGTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148371.8 |
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| CDS CCA 72 bp | CAGTGGCTACAGCTGGGACACCTCCCTGGAGGATGCTaGAGCAGCCTTCGCAGCTGTGAACAGGCCACCAAG | + |
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Preference number: 6 (lower is better) Translates to: QWLQLGHLPGGC*SSLRSCEQATK Trigger: CTTGGTGGCCTGTTCACAGCTGCGAAGGCTGCTCCAGCATCCTCCAGGGAGGTGTCCCAGCTGTAGCCACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS CCA 72 bp | GACATGAAGGCTTCGGGATGGGGCAGTGGCTACAGCTaGGACACCTCCCTGGAGGATGCTGGAGCAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: DMKASGWGSGYS*DTSLEDAGAAF Trigger: GAAGGCTGCTCCAGCATCCTCCAGGGAGGTGTCCCAGCTGTAGCCACTGCCCCATCCCGAAGCCTTCATGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS CCA 72 bp | CTGGCACAAAAGAGGCCCCGAGGATGGCGCCTCAGATaGAAGCGAGGAATGAGGTCCTGGAGACTGGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LAQKRPRGWRLR*KRGMRSWRLEG Trigger: TCCCTCCAGTCTCCAGGACCTCATTCCTCGCTTCCATCTGAGGCGCCATCCTCGGGGCCTCTTTTGTGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS CCA 72 bp | AGCCAGCCACAAGCATCAGGACTTAGAGTTGGTGCCTaGGGACCACCTAGGGTGGCCACGAGGCAGCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: SQPQASGLRVGA*GPPRVATRQQG Trigger: TCCTTGCTGCCTCGTGGCCACCCTAGGTGGTCCCCAGGCACCAACTCTAAGTCCTGATGCTTGTGGCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148371.8 |
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| CDS CAA 90 bp | AGAGCGGTGTCCATCTCGTCGACGTACTCTACCTGCAGAGCAATGTaGAGTGCCTGCGACAGGGCTGTGATCTGCACGTGGTCACACTCC | + |
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Preference number: 6 (lower is better) Translates to: RAVSISSTYSTCRAM*SACDRAVICTWSHS Trigger: GGAGTGTGACCACGTGCAGATCACAGCCCTGTCGCAGGCACTCAACATTGCTCTGCAGGTAGAGTACGTCGACGAGATGGACACCGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS CAA 90 bp | GCTGGAGCAGCCTTCGCAGCTGTGAACAGGCCACCAAGGGCGATTTaGGAGTGGGTAAGACAAGACGGAGAACAGAAGGTAAAGTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: AGAAFAAVNRPPRAI*EWVRQDGEQKVKWG Trigger: CCCCCACTTTACCTTCTGTTCTCCGTCTTGTCTTACCCACTCCAAAATCGCCCTTGGTGGCCTGTTCACAGCTGCGAAGGCTGCTCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS GCA 72 bp | TTCAGAGCGGTGTCCATCTCGTCGACGTACTCTACCTaGAGAGCAATGTTGAGTGCCTGCGACAGGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: FRAVSISSTYST*RAMLSACDRAV Trigger: CACAGCCCTGTCGCAGGCACTCAACATTGCTCTGCAGGTAGAGTACGTCGACGAGATGGACACCGCTCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS GCA 72 bp | TTCCTGATGAAGGCCGACGTGAGGAGGCGTAAGAACTaGACGATTCGGTCCGAGGAACTCTGGTCATTGAAC | + |
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Preference number: 6 (lower is better) Translates to: FLMKADVRRRKN*TIRSEELWSLN Trigger: GTTCAATGACCAGAGTTCCTCGGACCGAATCGTGCAGTTCTTACGCCTCCTCACGTCGGCCTTCATCAGGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS CCA 72 bp | AGGCGTAAGAACTGCACGATTCGGTCCGAGGAACTCTaGTCATTGAACACCTTCAGCAGGCTGGACACTGAG | + |
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Preference number: 6 (lower is better) Translates to: RRKNCTIRSEEL*SLNTFSRLDTE Trigger: CTCAGTGTCCAGCCTGCTGAAGGTGTTCAATGACCAGAGTTCCTCGGACCGAATCGTGCAGTTCTTACGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS CCA 72 bp | AGTGGGATGTTTTATAGAGCAGATAAACCGAAGGGATaGCAGCCTCGGGGAACACGTGGTGGTTCAGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: SGMFYRADKPKG*QPRGTRGGSER Trigger: CCGCTCTGAACCACCACGTGTTCCCCGAGGCTGCCATCCCTTCGGTTTATCTGCTCTATAAAACATCCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS CAA 72 bp | GCCTTCGCAGCTGTGAACAGGCCACCAAGGGCGATTTaGGAGTGGGTAAGACAAGACGGAGAACAGAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: AFAAVNRPPRAI*EWVRQDGEQKV Trigger: TACCTTCTGTTCTCCGTCTTGTCTTACCCACTCCAAAATCGCCCTTGGTGGCCTGTTCACAGCTGCGAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS CAA 90 bp | AGGAGGCGTAAGAACTGCACGATTCGGTCCGAGGAACTCTGGTCATaGAACACCTTCAGCAGGCTGGACACTGAGCTATCCTTCTCTACC | + |
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Preference number: 6 (lower is better) Translates to: RRRKNCTIRSEELWS*NTFSRLDTELSFST Trigger: GGTAGAGAAGGATAGCTCAGTGTCCAGCCTGCTGAAGGTGTTCAATGACCAGAGTTCCTCGGACCGAATCGTGCAGTTCTTACGCCTCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS TCA 72 bp | AGAACTGCACGATTCGGTCCGAGGAACTCTGGTCATTaGACACCTTCAGCAGGCTGGACACTGAGCTATCCT | + |
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Preference number: 6 (lower is better) Translates to: RTARFGPRNSGH*TPSAGWTLSYP Trigger: AGGATAGCTCAGTGTCCAGCCTGCTGAAGGTGTTCAATGACCAGAGTTCCTCGGACCGAATCGTGCAGTTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021620.13 ENSMUST00000101094.9 ENSMUST00000179684.3 |
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| CDS CAA 72 bp | AGAATGGATAGAATGTCACATTTTTCTGATATTAGGTaGAAAGATGTTTCACTCTGCAGACATGAAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RMDRMSHFSDIR*KDVSLCRHEGF Trigger: GAAGCCTTCATGTCTGCAGAGTGAAACATCTTTCAACCTAATATCAGAAAAATGTGACATTCTATCCATTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101094.9 ENSMUST00000179684.3 |
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