Pregenerated sensors for OTUB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024767Ensembl transcript IDs: ENSMUST00000025679.11, ENSMUST00000123594.8, ENSMUST00000142085.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGTGTCTCTCTCACACCAGGTCAGCTCCTCCAGGGCCCAGAGGATaGCTAGCTGCTCCACCCACTCTAGGCCAGCCTCCTCCCATGAAT | + |
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Preference number: 1 (lower is better) Translates to: ECLSHTRSAPPGPRG*LAAPPTLGQPPPMN Trigger: ATTCATGGGAGGAGGCTGGCCTAGAGTGGGTGGAGCAGCTAGGCATCCTCTGGGCCCTGGAGGAGCTGACCTGGTGTGAGAGAGACACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR CCA 90 bp | TCCCACAGAAACCCTTGGGAGGCTAAGGAAGAAAGGGCAGGCCTATaGGAGCAGAACTCCAAGGAACCAGAAGGGGCCCACAGAGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: SHRNPWEAKEERAGL*EQNSKEPEGAHRGL Trigger: CAGGCCTCTGTGGGCCCCTTCTGGTTCCTTGGAGTTCTGCTCCCATAGGCCTGCCCTTTCTTCCTTAGCCTCCCAAGGGTTTCTGTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR CCA 90 bp | CCAACTTCTCTTGGCAGGAATGCTTGGGGTAGATGGTTGGAAAGCTaGGGACCCATCCTCGGGAAAGGGACAGCCAGACACAAGGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: PTSLGRNAWGRWLES*GPILGKGTARHKAA Trigger: GGCTGCCTTGTGTCTGGCTGTCCCTTTCCCGAGGATGGGTCCCCAGCTTTCCAACCATCTACCCCAAGCATTCCTGCCAAGAGAAGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR CCA 90 bp | TGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGTATGGGTaGCTTGAGACCTCTGGTCAAGTTCCCACAGAAACCCTTGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: WGPGQNSKSVSALYG*LETSGQVPTETLGR Trigger: CCTCCCAAGGGTTTCTGTGGGAACTTGACCAGAGGTCTCAAGCCACCCATACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR CCA 90 bp | AATCTCTCACCCCAGTACTCCTCAATCATGCAGGCCCTTGAAGGTTaGCAGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: NLSPQYSSIMQALEG*QRVVSGALARTASL Trigger: CAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGGCCTGCATGATTGAGGAGTACTGGGGTGAGAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGGCCCACAGAGGCCTGGTCCCTTCCAACTTCTCTTGGCAGGAATGCTTGGTACATGTCTAGCGCCTaGCAGGGGAGGCAGGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: KGPTEAWSLPTSLGRNAWYMSSA*QGRQAG Trigger: CCCCGCCTGCCTCCCCTGCCAGGCGCTAGACATGTA...CCAAGCATTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCTCTGTGGGCCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCGGCAGCAGCACTTCACATTTATTGAGGGCCTGCCCCCAAGGAGCTCACAGGCCAGCCTCCTCCCATaGATCTCTCACCCCAGTACT | + |
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Preference number: 2 (lower is better) Translates to: QRQQHFTFIEGLPPRSSQASLLP*ISHPST Trigger: AGTACTGGGGTGAGAGATTCATGGGAGGAGGCTGGC...CTGTGAGCTCCTTGGGGGCAGGCCCTCAATAAATGTGAAGTGCTGCTGCCGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025679.11 |
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| 3UTR CAA 90 bp | TGGTCCCTTCCAACTTCTCTTGGCAGGAATGCTTGGGGTAGATGGTaGGAAAGCTGGGGACCCATCCTCGGGAAAGGGACAGCCAGACAC | + |
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Preference number: 2 (lower is better) Translates to: WSLPTSLGRNAWGRW*ESWGPILGKGTARH Trigger: GTGTCTGGCTGTCCCTTTCCCGAGGATGGGTCCCCAGCTTTCCAACCATCTACCCCAAGCATTCCTGCCAAGAGAAGTTGGAAGGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGTATTACATGTCTAGCGCCTaGCAGGGGAGGCAGGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: ESCIWGPGQNSKSVSALYYMSSA*QGRQAG Trigger: CCCCGCCTGCCTCCCCTGCCAGGCGCTAGACATGTA...ATACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCGGCAGCAGCACTTCACATTTATTGAGGGCCTGCCCCCAAGGAGCTCACAGGAAAGGGCAGGCCTATaGGAGCAGAACTCCAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: QRQQHFTFIEGLPPRSSQERAGL*EQNSKE Trigger: TTCCTTGGAGTTCTGCTCCCATAGGCCTGCCCTTTC...CTGTGAGCTCCTTGGGGGCAGGCCCTCAATAAATGTGAAGTGCTGCTGCCGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025679.11 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCACTTCACATTTATTGAGGGCCTGCCCCCAAGGAGCTCACAGCCTGGGCCAGGCCCTTGAAGGTTaGCAGAGAGTTGTATCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SSTSHLLRACPQGAHSLGQALEG*QRVVSG Trigger: CCCAGATACAACTCTCTGCCAACCTTCAAGGGCCTG...GCCCAGGCTGTGAGCTCCTTGGGGGCAGGCCCTCAATAAATGTGAAGTGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGAACTCCAAGGAACCAGAAGGGGCCCACAGAGGCCTGGTCCCTTCCAACGGGAGGAGTGAAATATaGCCATTTACAACCACACAC | + |
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Preference number: 2 (lower is better) Translates to: EQNSKEPEGAHRGLVPSNGRSEI*PFTTTH Trigger: GTGTGTGGTTGTAAATGGTCATATTTCACTCCTCCC...GTTGGAAGGGACCAGGCCTCTGTGGGCCCCTTCTGGTTCCTTGGAGTTCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCTTGAAGGTTGGCAGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTACATGGAAGGTTCTATaGCAGGAGAAGGGAGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: ALEGWQRVVSGALARTASTWKVL*QEKGGV Trigger: CACTCCTCCCTTCTCCTGTCATAGAACCTTCCATGT...ACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGTCAAGTTCCCACAGAAACCCTTGGGAGGCTAAGGAAGAAAGGGCAGGCCAATGCTTGGGGTAGATaGTTGGAAAGCTGGGGACCC | + |
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Preference number: 2 (lower is better) Translates to: SGQVPTETLGRLRKKGQANAWGR*LESWGP Trigger: GGGTCCCCAGCTTTCCAACCATCTACCCCAAGCATT...GGCCTGCCCTTTCTTCCTTAGCCTCCCAAGGGTTTCTGTGGGAACTTGACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR CAA 90 bp | CCCAGTACTCCTCAATCATGCAGGCCCTTGAAGGTTGGCAGAGAGTaGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: PSTPQSCRPLKVGRE*YLGPWPEQQVCKCF Trigger: AAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGGCCTGCATGATTGAGGAGTACTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGAACTCCAAGGAACCAGAAGGGGCCCACAGAGGCCTGGTCCCTTCCAACAGGAGAAGGGAGGAGTaGAATATGACCATTTACAAC | + |
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Preference number: 2 (lower is better) Translates to: EQNSKEPEGAHRGLVPSNRRREE*NMTIYN Trigger: GTTGTAAATGGTCATATTTCACTCCTCCCTTCTCCT...GTTGGAAGGGACCAGGCCTCTGTGGGCCCCTTCTGGTTCCTTGGAGTTCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR CAA 90 bp | AGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTaGTATGGGTGGCTTGAGACCTCTGGTCAAGTTCCCACAGAAACC | + |
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Preference number: 2 (lower is better) Translates to: SCIWGPGQNSKSVSA*YGWLETSGQVPTET Trigger: GGTTTCTGTGGGAACTTGACCAGAGGTCTCAAGCCACCCATACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGCTTGGCAGGAATGCTTaGGGTAGATGGTTGGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: AESCIWGPGQNSKSVSALLGRNA*GRWLES Trigger: GCTTTCCAACCATCTACCCCAAGCATTCCTGCCAAG...CAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTGGGAGGCTAAGGAAGAAAGGGCAGGCCTATGGGAGCAGAACTCCAAGGAAGGGAGGAGTGAAATATaGCCATTTACAACCACACAC | + |
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Preference number: 2 (lower is better) Translates to: PWEAKEERAGLWEQNSKEGRSEI*PFTTTH Trigger: GTGTGTGGTTGTAAATGGTCATATTTCACTCCTCCC...TTCCTTGGAGTTCTGCTCCCATAGGCCTGCCCTTTCTTCCTTAGCCTCCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTTGAAGGTTGGCAGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCAGGAGAAGGGAGGAGTaGAATATGACCATTTACAAC | + |
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Preference number: 2 (lower is better) Translates to: PLKVGRELYLGPWPEQQVRRREE*NMTIYN Trigger: GTTGTAAATGGTCATATTTCACTCCTCCCTTCTCCT...GACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCAGCACTTCACATTTATTGAGGGCCTGCCCCCAAGGAGCTCACAGCCTGGGGCTTGGGGTAGATGGTaGGAAAGCTGGGGACCCATC | + |
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Preference number: 3 (lower is better) Translates to: QQHFTFIEGLPPRSSQPGAWGRW*ESWGPI Trigger: GATGGGTCCCCAGCTTTCCAACCATCTACCCCAAGC...CCCAGGCTGTGAGCTCCTTGGGGGCAGGCCCTCAATAAATGTGAAGTGCTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR CCA 72 bp | CTTGGCAGGAATGCTTGGGGTAGATGGTTGGAAAGCTaGGGACCCATCCTCGGGAAAGGGACAGCCAGACAC | + |
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Preference number: 3 (lower is better) Translates to: LGRNAWGRWLES*GPILGKGTARH Trigger: GTGTCTGGCTGTCCCTTTCCCGAGGATGGGTCCCCAGCTTTCCAACCATCTACCCCAAGCATTCCTGCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR CCA 72 bp | AACCCTTGGGAGGCTAAGGAAGAAAGGGCAGGCCTATaGGAGCAGAACTCCAAGGAACCAGAAGGGGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: NPWEAKEERAGL*EQNSKEPEGAH Trigger: GTGGGCCCCTTCTGGTTCCTTGGAGTTCTGCTCCCATAGGCCTGCCCTTTCTTCCTTAGCCTCCCAAGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR TCA 72 bp | TCTCTCACCCCAGTACTCCTCAATCATGCAGGCCCTTaGAGGTTGGCAGAGAGTTGTATCTGGGGCCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: SLTPVLLNHAGP*RLAESCIWGPG Trigger: GCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGGCCTGCATGATTGAGGAGTACTGGGGTGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR CCA 72 bp | AGAACTCCAAGGAACCAGAAGGGGCCCACAGAGGCCTaGTCCCTTCCAACTTCTCTTGGCAGGAATGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: RTPRNQKGPTEA*SLPTSLGRNAW Trigger: CCAAGCATTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCTCTGTGGGCCCCTTCTGGTTCCTTGGAGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR CCA 72 bp | CAACTTCTCTTGGCAGGAATGCTTGGGGTAGATGGTTaGAAAGCTGGGGACCCATCCTCGGGAAAGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: QLLLAGMLGVDG*KAGDPSSGKGQ Trigger: CTGTCCCTTTCCCGAGGATGGGTCCCCAGCTTTCCAACCATCTACCCCAAGCATTCCTGCCAAGAGAAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR CCA 72 bp | CTTCCAACTTCTCTTGGCAGGAATGCTTGGGGTAGATaGTTGGAAAGCTGGGGACCCATCCTCGGGAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: LPTSLGRNAWGR*LESWGPILGKG Trigger: CCCTTTCCCGAGGATGGGTCCCCAGCTTTCCAACCATCTACCCCAAGCATTCCTGCCAAGAGAAGTTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR CCA 72 bp | CCCTTGAAGGTTGGCAGAGAGTTGTATCTGGGGCCCTaGCCAGAACAGCAAGTCTGTAAGTGCTTTGTATGG | + |
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Preference number: 3 (lower is better) Translates to: PLKVGRELYLGP*PEQQVCKCFVW Trigger: CCATACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR CCA 72 bp | GGCCAGAACAGCAAGTCTGTAAGTGCTTTGTATGGGTaGCTTGAGACCTCTGGTCAAGTTCCCACAGAAACC | + |
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Preference number: 3 (lower is better) Translates to: GQNSKSVSALYG*LETSGQVPTET Trigger: GGTTTCTGTGGGAACTTGACCAGAGGTCTCAAGCCACCCATACAAAGCACTTACAGACTTGCTGTTCTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| 3UTR TCA 72 bp | ACCAGCATCCCCTTTAATAAAACATGGAAGGTTCTATaGCAGGAGAAGGGAGGAGTGAAATATGACCATTTA | + |
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Preference number: 3 (lower is better) Translates to: TSIPFNKTWKVL*QEKGGVKYDHL Trigger: TAAATGGTCATATTTCACTCCTCCCTTCTCCTGTCATAGAACCTTCCATGTTTTATTAAAGGGGATGCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR TCA 90 bp | TACATGTCTAGCGCCTGGCAGGGGAGGCAGGCGGGGCACAACAGGCCAGCCGGTGAGTTCCAGCCGCTCTaGCACCAGAGGATTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: YMSSAWQGRQAGHNRPAGEFQPL*HQRILH Trigger: GTGCAGAATCCTCTGGTGTCAGAGCGGCTGGAACTC...ACCGGCTGGCCTGTTGTGCCCCGCCTGCCTCCCCTGCCAGGCGCTAGACATGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR GCA 90 bp | AGCAGCACTTCACATTTATTGAGGGCCTGCCCCCAAGGAGCTCACAGCCTGGGCCGTGTGGGTTGGTGGTaGCGCCCTCGCCGCGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SSTSHLLRACPQGAHSLGRVGWW*RPRRGP Trigger: TGGACCGCGGCGAGGGCGGCACCACCAACCCACACG...GCCCAGGCTGTGAGCTCCTTGGGGGCAGGCCCTCAATAAATGTGAAGTGCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR GCA 90 bp | GCCCTTGAAGGTTGGCAGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCGTGTGGGTTGGTGGTaGCGCCCTCGCCGCGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ALEGWQRVVSGALARTASRVGWW*RPRRGP Trigger: TGGACCGCGGCGAGGGCGGCACCACCAACCCACACG...ACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CCA 90 bp | AAGGGGCCCACAGAGGCCTGGTCCCTTCCAACTTCTCTTGGCAGGAATGCTTGGAGACGTGTGGGTTGGTaGTGCCGCCCTCGCCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: KGPTEAWSLPTSLGRNAWRRVGW*CRPRRG Trigger: ACCGCGGCGAGGGCGGCACCACCAACCCACACGTCT...CCAAGCATTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCTCTGTGGGCCCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CCA 90 bp | TACATGTCTAGCGCCTGGCAGGGGAGGCAGGCGGGGCACAACAGGCCAGCCGGTTCCATGTACTCCACTTaGATGGACACACTGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: YMSSAWQGRQAGHNRPAGSMYST*MDTLRA Trigger: GGCCCTCAGTGTGTCCATCCAAGTGGAGTACATGGA...ACCGGCTGGCCTGTTGTGCCCCGCCTGCCTCCCCTGCCAGGCGCTAGACATGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR TCA 90 bp | GAACCAGAAGGGGCCCACAGAGGCCTGGTCCCTTCCAACTTCTCTTGGCAGGAACTTGGATGGACACACTaGGGGCCTGGGCCAGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: EPEGAHRGLVPSNFSWQELGWTH*GPGPGL Trigger: TAGCCCTGGCCCAGGCCCTCAGTGTGTCCATCCAAG...TTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCTCTGTGGGCCCCTTCTGGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CCA 90 bp | AGAAACCCTTGGGAGGCTAAGGAAGAAAGGGCAGGCCTATGGGAGCAGAACTCCAGACGTGTGGGTTGGTaGTGCCGCCCTCGCCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: RNPWEAKEERAGLWEQNSRRVGW*CRPRRG Trigger: ACCGCGGCGAGGGCGGCACCACCAACCCACACGTCT...GGAGTTCTGCTCCCATAGGCCTGCCCTTTCTTCCTTAGCCTCCCAAGGGTTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CCA 90 bp | AGAAACCCTTGGGAGGCTAAGGAAGAAAGGGCAGGCCTATGGGAGCAGAACTCCGGAAGACGTGTGGGTTaGTGGTGCCGCCCTCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: RNPWEAKEERAGLWEQNSGRRVG*WCRPRR Trigger: GCGGCGAGGGCGGCACCACCAACCCACACGTCTTCC...GGAGTTCTGCTCCCATAGGCCTGCCCTTTCTTCCTTAGCCTCCCAAGGGTTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CCA 90 bp | GGCAGGAATGCTTGGGGTAGATGGTTGGAAAGCTGGGGACCCATCCTCGGGAAACTCGGGGAAGACGTGTaGGTTGGTGGTGCCGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: GRNAWGRWLESWGPILGKLGEDV*VGGAAL Trigger: GAGGGCGGCACCACCAACCCACACGTCTTCCCCGAG...TTTCCCGAGGATGGGTCCCCAGCTTTCCAACCATCTACCCCAAGCATTCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR TCA 90 bp | GAGCAGAACTCCAAGGAACCAGAAGGGGCCCACAGAGGCCTGGTCCCTTCCAACCAGCAGGTCAGCTACTaGGGTCTGCTTCTCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: EQNSKEPEGAHRGLVPSNQQVSY*GLLLHL Trigger: CAGGTGGAGAAGCAGACCTCAGTAGCTGACCTGCTG...GTTGGAAGGGACCAGGCCTCTGTGGGCCCCTTCTGGTTCCTTGGAGTTCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR TCA 90 bp | AAGGGGCCCACAGAGGCCTGGTCCCTTCCAACTTCTCTTGGCAGGAATGCTTGGCCTGGGCCAGGGCTATaGTGTGGATGTGGTCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: KGPTEAWSLPTSLGRNAWPGPGL*CGCGRS Trigger: AGAGCGACCACATCCACATCATAGCCCTGGCCCAGG...CCAAGCATTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCTCTGTGGGCCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR TCA 90 bp | GCCCTTGAAGGTTGGCAGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTTGGATGGACACACTaGGGGCCTGGGCCAGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: ALEGWQRVVSGALARTASLGWTH*GPGPGL Trigger: TAGCCCTGGCCCAGGCCCTCAGTGTGTCCATCCAAG...ACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGCACTTCACATTTATTGAGGGCCTGCCCCCAAGGAGCTCACAGCCTGGGAGAGAAGGTAGACCTTaGGCTCGGAGCCCTCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: QQHFTFIEGLPPRSSQPGREGRP*ARSPRG Trigger: TCCCCGAGGGCTCCGAGCCCAAGGTCTACCTTCTCT...CCCAGGCTGTGAGCTCCTTGGGGGCAGGCCCTCAATAAATGTGAAGTGCTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR TCA 90 bp | AAGGGGCCCACAGAGGCCTGGTCCCTTCCAACTTCTCTTGGCAGGAATGCTTGGGAGTTCCAGCCGCTCTaGCACCAGAGGATTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: KGPTEAWSLPTSLGRNAWEFQPL*HQRILH Trigger: GTGCAGAATCCTCTGGTGTCAGAGCGGCTGGAACTC...CCAAGCATTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCTCTGTGGGCCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CCA 90 bp | GAAAGAAAGAAAACCCTCTGTACATGTCTAGCGCCTGGCAGGGGAGGCAGGCGGCGCTCTCCTTGCACATaGGTTCCACCTCCTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERKKTLCTCLAPGRGGRRRSPCT*VPPPAG Trigger: GCCAGCAGGAGGTGGAACCCATGTGCAAGGAGAGCG...CCGCCTGCCTCCCCTGCCAGGCGCTAGACATGTACAGAGGGTTTTCTTTCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTGAAGGTTGGCAGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCCGCTCTCCTTGCACATaGGTTCCACCTCCTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLKVGRELYLGPWPEQQVRSPCT*VPPPAG Trigger: GCCAGCAGGAGGTGGAACCCATGTGCAAGGAGAGCG...GACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR TCA 90 bp | ATCATGCAGGCCCTTGAAGGTTGGCAGAGAGTTGTATCTGGGGCCCTGGCCAGAGTAGGTAGCCTGAGGTaGGCAGTCGCAGGTAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: IMQALEGWQRVVSGALARVGSLR*AVAGRP Trigger: TGGTCTACCTGCGACTGCTCACCTCAGGCTACCTAC...TCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGGCCTGCATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR TCA 90 bp | ATCATGCAGGCCCTTGAAGGTTGGCAGAGAGTTGTATCTGGGGCCCTGGCCAGATCCGGCCACCCTCGATaGAGTGCTCGAAGAACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IMQALEGWQRVVSGALARSGHPR*SARRTC Trigger: GCAAGTTCTTCGAGCACTTCATCGAGGGTGGCCGGA...TCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGGCCTGCATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGAAGGGGCCCACAGAGGCCTGGTCCCTTCCAACTTCTCTTGGCAGGAATGGCCAGGGCTATGATGTaGATGTGGTCGCTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRRGPQRPGPFQLLLAGMARAMM*MWSLSL Trigger: CAAGGAGAGCGACCACATCCACATCATAGCCCTGGC...CATTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCTCTGTGGGCCCCTTCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGTATGGAAGACGTGTGGGTTaGTGGTGCCGCCCTCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ESCIWGPGQNSKSVSALYGRRVG*WCRPRR Trigger: GCGGCGAGGGCGGCACCACCAACCCACACGTCTTCC...ATACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGTATGGGCTCGGGGAAGACGTGTaGGTTGGTGGTGCCGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SCIWGPGQNSKSVSALYGLGEDV*VGGAAL Trigger: GAGGGCGGCACCACCAACCCACACGTCTTCCCCGAG...CCCATACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGTCAAGTTCCCACAGAAACCCTTGGGAGGCTAAGGAAGAAAGGGCAGGCCAGAGAAGGTAGACCTTaGGCTCGGAGCCCTCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGQVPTETLGRLRKKGQAREGRP*ARSPRG Trigger: TCCCCGAGGGCTCCGAGCCCAAGGTCTACCTTCTCT...GGCCTGCCCTTTCTTCCTTAGCCTCCCAAGGGTTTCTGTGGGAACTTGACCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGGGAGGCTAAGGAAGAAAGGGCAGGCCTATGGGAGCAGAACTCCAAGGAAGTAGGTAGCCTGAGGTaGGCAGTCGCAGGTAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: PWEAKEERAGLWEQNSKEVGSLR*AVAGRP Trigger: TGGTCTACCTGCGACTGCTCACCTCAGGCTACCTAC...TTCCTTGGAGTTCTGCTCCCATAGGCCTGCCCTTTCTTCCTTAGCCTCCCAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTTGAAGGTTGGCAGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTTGTGGTCGCTCTCCTTaGACATGGGTTCCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALEGWQRVVSGALARTASCGRSP*TWVPPP Trigger: AGGAGGTGGAACCCATGTGCAAGGAGAGCGACCACA...ACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGAAAGAAAACCCTCTGTACATGTCTAGCGCCTGGCAGGGGAGGCAGGCGGGCCAGGGCTATGATGTaGATGTGGTCGCTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERKKTLCTCLAPGRGGRRARAMM*MWSLSL Trigger: CAAGGAGAGCGACCACATCCACATCATAGCCCTGGC...CCGCCTGCCTCCCCTGCCAGGCGCTAGACATGTACAGAGGGTTTTCTTTCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| 3UTR CAA 72 bp | AGGGGCCCACAGAGGCCTGGTCCCTTCCAACTTCTCTaGGCAGGAATGCTTGGGGTAGATGGTTGGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGPQRPGPFQLL*AGMLGVDGWKA Trigger: AGCTTTCCAACCATCTACCCCAAGCATTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCTCTGTGGGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR TCA 90 bp | TGGTCAAGTTCCCACAGAAACCCTTGGGAGGCTAAGGAAGAAAGGGCAGGCCTAAGGTGCTCTGGTCATTaGAGGAGGCCAGCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSSSHRNPWEAKEERAGLRCSGH*RRPAGQ Trigger: CTGACCTGCTGGCCTCCTTCAATGACCAGAGCACCT...TAGGCCTGCCCTTTCTTCCTTAGCCTCCCAAGGGTTTCTGTGGGAACTTGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR TCA 90 bp | AGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGTATGGGCCTGGGCCAGGGCTATaGTGTGGATGTGGTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCIWGPGQNSKSVSALYGPGPGL*CGCGRS Trigger: AGAGCGACCACATCCACATCATAGCCCTGGCCCAGG...CCCATACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTGAAGGTTGGCAGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCACCGCTGCAGTTCCTTaGTGTCATCTAGCAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLKVGRELYLGPWPEQQVTAAVP*CHLAVP Trigger: AGGCACTGCTAGATGACAGCAAGGAACTGCAGCGGT...GACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR GCA 90 bp | GGACAGGCAAGCTCTACTAGAGTGTCTCTCTCACACCAGGTCAGCTCCTCCAGGAGTGCTCGAAGAACTTaGTCTCCCGCTGTAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQASSTRVSLSHQVSSSRSARRT*SPAVGS Trigger: GCTACCTACAGCGGGAGAGCAAGTTCTTCGAGCACT...CCTGGAGGAGCTGACCTGGTGTGAGAGAGACACTCTAGTAGAGCTTGCCTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGGGAGGCTAAGGAAGAAAGGGCAGGCCTATGGGAGCAGAACTCCAAGGAATGTGGTCGCTCTCCTTaGACATGGGTTCCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PWEAKEERAGLWEQNSKECGRSP*TWVPPP Trigger: AGGAGGTGGAACCCATGTGCAAGGAGAGCGACCACA...TTCCTTGGAGTTCTGCTCCCATAGGCCTGCCCTTTCTTCCTTAGCCTCCCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGAAAGAAAACCCTCTGTACATGTCTAGCGCCTGGCAGGGGAGGCAGGCGGGGTTCCACCTCCTGCTaGCAGAACTCCTTAACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ERKKTLCTCLAPGRGGRRGSTSC*QNSLTV Trigger: GACTGTTAAGGAGTTCTGCCAGCAGGAGGTGGAACC...CCGCCTGCCTCCCCTGCCAGGCGCTAGACATGTACAGAGGGTTTTCTTTCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGAAGGGGCCCACAGAGGCCTGGTCCCTTCCAACTTCTCTTGGCAGGAATGGCTATGATGTGGATGTaGTCGCTCTCCTTGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: TRRGPQRPGPFQLLLAGMAMMWM*SLSLHM Trigger: CATGTGCAAGGAGAGCGACCACATCCACATCATAGC...CATTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCTCTGTGGGCCCCTTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | ATCATGCAGGCCCTTGAAGGTTGGCAGAGAGTTGTATCTGGGGCCCTGGCCAGATCCATGTACTCCACTTaGATGGACACACTGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IMQALEGWQRVVSGALARSMYST*MDTLRA Trigger: GGCCCTCAGTGTGTCCATCCAAGTGGAGTACATGGA...TCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGGCCTGCATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| 3UTR CAA 72 bp | TGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTaGTATGGGTGGCTTGAGACCTCTGGTCAAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WGPGQNSKSVSA*YGWLETSGQVP Trigger: GGGAACTTGACCAGAGGTCTCAAGCCACCCATACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| 3UTR CAA 72 bp | CCTCAATCATGCAGGCCCTTGAAGGTTGGCAGAGAGTaGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQSCRPLKVGRE*YLGPWPEQQVC Trigger: ACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGGCCTGCATGATTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| 3UTR CAA 72 bp | ATCTCTCACCCCAGTACTCCTCAATCATGCAGGCCCTaGAAGGTTGGCAGAGAGTTGTATCTGGGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISHPSTPQSCRP*KVGRELYLGPW Trigger: CCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGGCCTGCATGATTGAGGAGTACTGGGGTGAGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR TCA 90 bp | AGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGTATGGGAGGTGCTCTGGTCATTaGAGGAGGCCAGCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCIWGPGQNSKSVSALYGRCSGH*RRPAGQ Trigger: CTGACCTGCTGGCCTCCTTCAATGACCAGAGCACCT...CCCATACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTTGAAGGTTGGCAGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTGACCACAAGGTAGTCTaGGGTGCTCTGGTCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALEGWQRVVSGALARTASDHKVV*GALVIE Trigger: TTCAATGACCAGAGCACCTCAGACTACCTTGTGGTC...ACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGTCAAGTTCCCACAGAAACCCTTGGGAGGCTAAGGAAGAAAGGGCAGGCCAGTGCTCGAAGAACTTaGTCTCCCGCTGTAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGQVPTETLGRLRKKGQASARRT*SPAVGS Trigger: GCTACCTACAGCGGGAGAGCAAGTTCTTCGAGCACT...GGCCTGCCCTTTCTTCCTTAGCCTCCCAAGGGTTTCTGTGGGAACTTGACCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGTAGGAGTCGCTACCCAGTaGCTCCTGCTTCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RELYLGPWPEQQVCKCFVGVATQ*LLLLLL Trigger: CAGCAGCAGAAGCAGGAGCCACTGGGTAGCGACTCC...TACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025679.11 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGGTCCCTTCCAACTTCTCTTGGCAGGAATGCTTGGGGTAGATGGTTGGGGTTCCACCTCCTGCTaGCAGAACTCCTTAACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPGPFQLLLAGMLGVDGWGSTSC*QNSLTV Trigger: GACTGTTAAGGAGTTCTGCCAGCAGGAGGTGGAACC...CCAACCATCTACCCCAAGCATTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGAAAGAAAACCCTCTGTACATGTCTAGCGCCTGGCAGGGGAGGCAGGCGGGCTATGATGTGGATGTaGTCGCTCTCCTTGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: ERKKTLCTCLAPGRGGRRAMMWM*SLSLHM Trigger: CATGTGCAAGGAGAGCGACCACATCCACATCATAGC...CCGCCTGCCTCCCCTGCCAGGCGCTAGACATGTACAGAGGGTTTTCTTTCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGTATTCCGGCCACCCTCGATaGAGTGCTCGAAGAACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESCIWGPGQNSKSVSALYSGHPR*SARRTC Trigger: GCAAGTTCTTCGAGCACTTCATCGAGGGTGGCCGGA...ATACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR GCA 90 bp | TCTCACCCCAGTACTCCTCAATCATGCAGGCCCTTGAAGGTTGGCAGAGAGTTGACCGCTGCAGTTCCTTaGTGTCATCTAGCAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHPSTPQSCRPLKVGRELTAAVP*CHLAVP Trigger: AGGCACTGCTAGATGACAGCAAGGAACTGCAGCGGT...CAACTCTCTGCCAACCTTCAAGGGCCTGCATGATTGAGGAGTACTGGGGTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGTCAAGTTCCCACAGAAACCCTTGGGAGGCTAAGGAAGAAAGGGCAGGCCACGGCTTTGAACCGCTaGAGTTCCTTGCTGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SGQVPTETLGRLRKKGQATALNR*SSLLSS Trigger: AGATGACAGCAAGGAACTGCAGCGGTTCAAAGCCGT...GGCCTGCCCTTTCTTCCTTAGCCTCCCAAGGGTTTCTGTGGGAACTTGACCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGGGAGGCTAAGGAAGAAAGGGCAGGCCTATGGGAGCAGAACTCCAAGGAATCAGCTACTGAGGTCTaGTTCTCCACCTGCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: PWEAKEERAGLWEQNSKESATEV*FSTCSI Trigger: TATCGAGCAGGTGGAGAAGCAGACCTCAGTAGCTGA...TTCCTTGGAGTTCTGCTCCCATAGGCCTGCCCTTTCTTCCTTAGCCTCCCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGAAGGGGCCCACAGAGGCCTGGTCCCTTCCAACTTCTCTTGGCAGGAATGAATTCAGTGAAGCCCTaGGATACCAGGTCCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TRRGPQRPGPFQLLLAGMNSVKP*DTRSSL Trigger: TAAAGAGGACCTGGTATCCCAGGGCTTCACTGAATT...CATTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCTCTGTGGGCCCCTTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR TCA 90 bp | GGACAGGCAAGCTCTACTAGAGTGTCTCTCTCACACCAGGTCAGCTCCTCCAGGGGTCTTCCGTATGTATaGGTACTTTTTGTGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQASSTRVSLSHQVSSSRGLPYV*VLFVEV Trigger: GACCTCCACAAAAAGTACTCATACATACGGAAGACC...CCTGGAGGAGCTGACCTGGTGTGAGAGAGACACTCTAGTAGAGCTTGCCTGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGGACCACAAGGTAGTCTaGGGTGCTCTGGTCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AESCIWGPGQNSKSVSALDHKVV*GALVIE Trigger: TTCAATGACCAGAGCACCTCAGACTACCTTGTGGTC...CAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGTATGGGACGGCTTTGAACCGCTaGAGTTCCTTGCTGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SCIWGPGQNSKSVSALYGTALNR*SSLLSS Trigger: AGATGACAGCAAGGAACTGCAGCGGTTCAAAGCCGT...CCCATACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGTACCACCCTCGATGAAGTaGTCGAAGAACTTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RELYLGPWPEQQVCKCFVPPSMK*SKNLLS Trigger: GGAGAGCAAGTTCTTCGAGCACTTCATCGAGGGTGG...TACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGGGAGGCTAAGGAAGAAAGGGCAGGCCTATGGGAGCAGAACTCCAAGGAAAATTCAGTGAAGCCCTaGGATACCAGGTCCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PWEAKEERAGLWEQNSKENSVKP*DTRSSL Trigger: TAAAGAGGACCTGGTATCCCAGGGCTTCACTGAATT...TTCCTTGGAGTTCTGCTCCCATAGGCCTGCCCTTTCTTCCTTAGCCTCCCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGAAGGGGCCCACAGAGGCCTGGTCCCTTCCAACTTCTCTTGGCAGGAATGTCCATGAACGTGTTGTaGAAGTCTTCAATTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TRRGPQRPGPFQLLLAGMSMNVL*KSSIVN Trigger: ATTCACAATTGAAGACTTCCACAACACGTTCATGGA...CATTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCTCTGTGGGCCCCTTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGTATGGTCTTCCGTATGTATaGGTACTTTTTGTGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESCIWGPGQNSKSVSALYGLPYV*VLFVEV Trigger: GACCTCCACAAAAAGTACTCATACATACGGAAGACC...ATACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGTATGAGTACTTTTTGTaGAGGTCCTTGATCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AESCIWGPGQNSKSVSALYEYFL*RSLIFC Trigger: ACAGAAGATCAAGGACCTCCACAAAAAGTACTCATA...CAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGTCCATGAACGTGTTGTaGAAGTCTTCAATTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AESCIWGPGQNSKSVSALSMNVL*KSSIVN Trigger: ATTCACAATTGAAGACTTCCACAACACGTTCATGGA...CAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGTATGGGTATGAGTACTTTTTGTaGAGGTCCTTGATCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCIWGPGQNSKSVSALYGYEYFL*RSLIFC Trigger: ACAGAAGATCAAGGACCTCCACAAAAAGTACTCATA...CCCATACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS GCA 90 bp | AGACCTTGGGCTCGGAGCCCTCGGGGAAGACGTGTGGGTTGGTGGTaGCGCCCTCGCCGCGGTCCATGTACTCCACTTGGATGGACACAC | + |
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Preference number: 5 (lower is better) Translates to: RPWARSPRGRRVGWW*RPRRGPCTPLGWTH Trigger: GTGTGTCCATCCAAGTGGAGTACATGGACCGCGGCGAGGGCGGCACCACCAACCCACACGTCTTCCCCGAGGGCTCCGAGCCCAAGGTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS CCA 90 bp | GGTAGACCTTGGGCTCGGAGCCCTCGGGGAAGACGTGTGGGTTGGTaGTGCCGCCCTCGCCGCGGTCCATGTACTCCACTTGGATGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GRPWARSPRGRRVGW*CRPRRGPCTPLGWT Trigger: TGTCCATCCAAGTGGAGTACATGGACCGCGGCGAGGGCGGCACCACCAACCCACACGTCTTCCCCGAGGGCTCCGAGCCCAAGGTCTACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS CCA 90 bp | GAAGGTAGACCTTGGGCTCGGAGCCCTCGGGGAAGACGTGTGGGTTaGTGGTGCCGCCCTCGCCGCGGTCCATGTACTCCACTTGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: EGRPWARSPRGRRVG*WCRPRRGPCTPLGW Trigger: CCATCCAAGTGGAGTACATGGACCGCGGCGAGGGCGGCACCACCAACCCACACGTCTTCCCCGAGGGCTCCGAGCCCAAGGTCTACCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS CCA 90 bp | GTAGAGAAGGTAGACCTTGGGCTCGGAGCCCTCGGGGAAGACGTGTaGGTTGGTGGTGCCGCCCTCGCCGCGGTCCATGTACTCCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: VEKVDLGLGALGEDV*VGGAALAAVHVLHL Trigger: CAAGTGGAGTACATGGACCGCGGCGAGGGCGGCACCACCAACCCACACGTCTTCCCCGAGGGCTCCGAGCCCAAGGTCTACCTTCTCTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CAA 90 bp | GAAAGAAAGAAAACCCTCTGTACATGTCTAGCGCCTGGCAGGGGAGGCAGGCGGGGGAAGACGTGTGGGTaGGTGGTGCCGCCCTCGCCG | + |
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Preference number: 5 (lower is better) Translates to: ERKKTLCTCLAPGRGGRRGKTCG*VVPPSP Trigger: CGGCGAGGGCGGCACCACCAACCCACACGTCTTCCC...CCGCCTGCCTCCCCTGCCAGGCGCTAGACATGTACAGAGGGTTTTCTTTCTTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CAA 90 bp | TACATGTCTAGCGCCTGGCAGGGGAGGCAGGCGGGGCACAACAGGCCAGCCGGTCTGCACAGCAATCTCTaGCTGAATTCGGTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YMSSAWQGRQAGHNRPAGLHSNL*LNSVLL Trigger: CAGCAGGACCGAATTCAGCAAGAGATTGCTGTGCAG...ACCGGCTGGCCTGTTGTGCCCCGCCTGCCTCCCCTGCCAGGCGCTAGACATGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CAA 90 bp | TCTCACCCCAGTACTCCTCAATCATGCAGGCCCTTGAAGGTTGGCAGAGAGTTGGGGAAGACGTGTGGGTaGGTGGTGCCGCCCTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SHPSTPQSCRPLKVGRELGKTCG*VVPPSP Trigger: CGGCGAGGGCGGCACCACCAACCCACACGTCTTCCC...CAACTCTCTGCCAACCTTCAAGGGCCTGCATGATTGAGGAGTACTGGGGTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS CCA 90 bp | TCCACTTGGATGGACACACTGAGGGCCTGGGCCAGGGCTATGATGTaGATGTGGTCGCTCTCCTTGCACATGGGTTCCACCTCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: STWMDTLRAWARAMM*MWSLSLHMGSTSCW Trigger: CCAGCAGGAGGTGGAACCCATGTGCAAGGAGAGCGACCACATCCACATCATAGCCCTGGCCCAGGCCCTCAGTGTGTCCATCCAAGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS CCA 90 bp | TGTAGAGGATATCGTAGTGTCCAGGTCGGTAGAGAAGGTAGACCTTaGGCTCGGAGCCCTCGGGGAAGACGTGTGGGTTGGTGGTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CRGYRSVQVGREGRP*ARSPRGRRVGWWCR Trigger: GCGGCACCACCAACCCACACGTCTTCCCCGAGGGCTCCGAGCCCAAGGTCTACCTTCTCTACCGACCTGGACACTACGATATCCTCTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CAA 90 bp | GAGCAGAACTCCAAGGAACCAGAAGGGGCCCACAGAGGCCTGGTCCCTTCCAACAACCGCTGCAGTTCCTaGCTGTCATCTAGCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EQNSKEPEGAHRGLVPSNNRCSS*LSSSSA Trigger: GGCACTGCTAGATGACAGCAAGGAACTGCAGCGGTT...GTTGGAAGGGACCAGGCCTCTGTGGGCCCCTTCTGGTTCCTTGGAGTTCTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CAA 90 bp | CAGCAGCACTTCACATTTATTGAGGGCCTGCCCCCAAGGAGCTCACAGCCTGGGGAGGTGCTCTGGTCATaGAAGGAGGCCAGCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QQHFTFIEGLPPRSSQPGEVLWS*KEASRS Trigger: TGACCTGCTGGCCTCCTTCAATGACCAGAGCACCTC...CCCAGGCTGTGAGCTCCTTGGGGGCAGGCCCTCAATAAATGTGAAGTGCTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CAA 90 bp | ACCAGAAGGGGCCCACAGAGGCCTGGTCCCTTCCAACTTCTCTTGGCAGGAATGGAGGTGCTCTGGTCATaGAAGGAGGCCAGCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TRRGPQRPGPFQLLLAGMEVLWS*KEASRS Trigger: TGACCTGCTGGCCTCCTTCAATGACCAGAGCACCTC...CATTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCTCTGTGGGCCCCTTCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CAA 90 bp | CCCTTGAAGGTTGGCAGAGAGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCATGTGGTCGCTCTCCTaGCACATGGGTTCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLKVGRELYLGPWPEQQVMWSLS*HMGSTS Trigger: GGAGGTGGAACCCATGTGCAAGGAGAGCGACCACAT...GACTTGCTGTTCTGGCCAGGGCCCCAGATACAACTCTCTGCCAACCTTCAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CAA 90 bp | CAGCGGCAGCAGCACTTCACATTTATTGAGGGCCTGCCCCCAAGGAGCTCACAGGTCCATGTACTCCACTaGGATGGACACACTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRQQHFTFIEGLPPRSSQVHVLH*DGHTEG Trigger: GCCCTCAGTGTGTCCATCCAAGTGGAGTACATGGAC...CTGTGAGCTCCTTGGGGGCAGGCCCTCAATAAATGTGAAGTGCTGCTGCCGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025679.11 |
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| CDS-3UTR CAA 90 bp | AAGGGGCCCACAGAGGCCTGGTCCCTTCCAACTTCTCTTGGCAGGAATGCTTGGGTCCATGTACTCCACTaGGATGGACACACTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KGPTEAWSLPTSLGRNAWVHVLH*DGHTEG Trigger: GCCCTCAGTGTGTCCATCCAAGTGGAGTACATGGAC...CCAAGCATTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCTCTGTGGGCCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CAA 90 bp | ACCAGAAGGGGCCCACAGAGGCCTGGTCCCTTCCAACTTCTCTTGGCAGGAATGCTGCACAGCAATCTCTaGCTGAATTCGGTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TRRGPQRPGPFQLLLAGMLHSNL*LNSVLL Trigger: CAGCAGGACCGAATTCAGCAAGAGATTGCTGTGCAG...CATTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCTCTGTGGGCCCCTTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CAA 90 bp | AGTTGTATCTGGGGCCCTGGCCAGAACAGCAAGTCTGTAAGTGCTTTGTATGGGATGTGGTCGCTCTCCTaGCACATGGGTTCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCIWGPGQNSKSVSALYGMWSLS*HMGSTS Trigger: GGAGGTGGAACCCATGTGCAAGGAGAGCGACCACAT...CCCATACAAAGCACTTACAGACTTGCTGTTCTGGCCAGGGCCCCAGATACAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS-3UTR CAA 90 bp | GAAAGAAAGAAAACCCTCTGTACATGTCTAGCGCCTGGCAGGGGAGGCAGGCGGATGTATGAGTACTTTTaGTGGAGGTCCTTGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ERKKTLCTCLAPGRGGRRMYEYF*WRSLIF Trigger: GAAGATCAAGGACCTCCACAAAAAGTACTCATACAT...CCGCCTGCCTCCCCTGCCAGGCGCTAGACATGTACAGAGGGTTTTCTTTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS TCA 90 bp | CGCTCGGTAGAAGCAGTTGCCATCAGGCCGGGTCTTCCGTATGTATaGGTACTTTTTGTGGAGGTCCTTGATCTTCTGTTGGTAGATGTT | + |
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Preference number: 5 (lower is better) Translates to: RSVEAVAIRPGLPYV*VLFVEVLDLLLVDV Trigger: AACATCTACCAACAGAAGATCAAGGACCTCCACAAAAAGTACTCATACATACGGAAGACCCGGCCTGATGGCAACTGCTTCTACCGAGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 ENSMUST00000142085.2 |
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| CDS-3UTR CAA 90 bp | AGGCCTGGTCCCTTCCAACTTCTCTTGGCAGGAATGCTTGGGGTAGATGGTTGGATGTATGAGTACTTTTaGTGGAGGTCCTTGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RPGPFQLLLAGMLGVDGWMYEYF*WRSLIF Trigger: GAAGATCAAGGACCTCCACAAAAAGTACTCATACAT...CCAACCATCTACCCCAAGCATTCCTGCCAAGAGAAGTTGGAAGGGACCAGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS CCA 72 bp | CCTTGGGCTCGGAGCCCTCGGGGAAGACGTGTGGGTTaGTGGTGCCGCCCTCGCCGCGGTCCATGTACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PWARSPRGRRVG*WCRPRRGPCTP Trigger: TGGAGTACATGGACCGCGGCGAGGGCGGCACCACCAACCCACACGTCTTCCCCGAGGGCTCCGAGCCCAAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS CAA 72 bp | ACCTTGGGCTCGGAGCCCTCGGGGAAGACGTGTGGGTaGGTGGTGCCGCCCTCGCCGCGGTCCATGTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLGSEPSGKTCG*VVPPSPRSMYS Trigger: GGAGTACATGGACCGCGGCGAGGGCGGCACCACCAACCCACACGTCTTCCCCGAGGGCTCCGAGCCCAAGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS GCA 72 bp | GCTCGGAGCCCTCGGGGAAGACGTGTGGGTTGGTGGTaGCGCCCTCGCCGCGGTCCATGTACTCCACTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ARSPRGRRVGWW*RPRRGPCTPLG Trigger: TCCAAGTGGAGTACATGGACCGCGGCGAGGGCGGCACCACCAACCCACACGTCTTCCCCGAGGGCTCCGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS CCA 72 bp | TGGGCTCGGAGCCCTCGGGGAAGACGTGTGGGTTGGTaGTGCCGCCCTCGCCGCGGTCCATGTACTCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: WARSPRGRRVGW*CRPRRGPCTPL Trigger: AAGTGGAGTACATGGACCGCGGCGAGGGCGGCACCACCAACCCACACGTCTTCCCCGAGGGCTCCGAGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS CCA 72 bp | GTAGACCTTGGGCTCGGAGCCCTCGGGGAAGACGTGTaGGTTGGTGGTGCCGCCCTCGCCGCGGTCCATGTA | + |
|
Preference number: 6 (lower is better) Translates to: VDLGLGALGEDV*VGGAALAAVHV Trigger: TACATGGACCGCGGCGAGGGCGGCACCACCAACCCACACGTCTTCCCCGAGGGCTCCGAGCCCAAGGTCTAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS CAA 90 bp | GTGTGGGTTGGTGGTGCCGCCCTCGCCGCGGTCCATGTACTCCACTaGGATGGACACACTGAGGGCCTGGGCCAGGGCTATGATGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VWVGGAALAAVHVLH*DGHTEGLGQGYDVD Trigger: ATCCACATCATAGCCCTGGCCCAGGCCCTCAGTGTGTCCATCCAAGTGGAGTACATGGACCGCGGCGAGGGCGGCACCACCAACCCACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS CCA 72 bp | GGCCAAACAGTTAACACCTTCGGAGTCGCTACCCAGTaGCTCCTGCTTCTGCTGCTGAGGTTCCTCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GQTVNTFGVATQ*LLLLLLRFLRR Trigger: GCGGCGGAGGAACCTCAGCAGCAGAAGCAGGAGCCACTGGGTAGCGACTCCGAAGGTGTTAACTGTTTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025679.11 |
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| CDS CCA 72 bp | TATCGTAGTGTCCAGGTCGGTAGAGAAGGTAGACCTTaGGCTCGGAGCCCTCGGGGAAGACGTGTGGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: YRSVQVGREGRP*ARSPRGRRVGW Trigger: CCAACCCACACGTCTTCCCCGAGGGCTCCGAGCCCAAGGTCTACCTTCTCTACCGACCTGGACACTACGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS TCA 72 bp | CGAAGAACTTGCTCTCCCGCTGTAGGTAGCCTGAGGTaGGCAGTCGCAGGTAGACCACAAGGTAGTCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRTCSPAVGSLR*AVAGRPQGSLR Trigger: CCTCAGACTACCTTGTGGTCTACCTGCGACTGCTCACCTCAGGCTACCTACAGCGGGAGAGCAAGTTCTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS GCA 72 bp | CCAGGTGGGAGAAGCCAAACGCTCGGTAGAAGCAGTTaGCATCAGGCCGGGTCTTCCGTATGTATGAGTACT | + |
|
Preference number: 6 (lower is better) Translates to: PGGRSQTLGRSS*HQAGSSVCMST Trigger: AGTACTCATACATACGGAAGACCCGGCCTGATGGCAACTGCTTCTACCGAGCGTTTGGCTTCTCCCACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 ENSMUST00000142085.2 |
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| CDS CAA 72 bp | TCAGTGAAGCCCTGGGATACCAGGTCCTCTTTACTCTaGGCAGACACGGCTTTGAACCGCTGCAGTTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SVKPWDTRSSLL*ADTALNRCSSL Trigger: CAAGGAACTGCAGCGGTTCAAAGCCGTGTCTGCCAAGAGTAAAGAGGACCTGGTATCCCAGGGCTTCACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS CAA 90 bp | ATTGTGAATTCAGTGAAGCCCTGGGATACCAGGTCCTCTTTACTCTaGGCAGACACGGCTTTGAACCGCTGCAGTTCCTTGCTGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: IVNSVKPWDTRSSLL*ADTALNRCSSLLSS Trigger: AGATGACAGCAAGGAACTGCAGCGGTTCAAAGCCGTGTCTGCCAAGAGTAAAGAGGACCTGGTATCCCAGGGCTTCACTGAATTCACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 |
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| CDS TCA 72 bp | GAAGCAGTTGCCATCAGGCCGGGTCTTCCGTATGTATaGGTACTTTTTGTGGAGGTCCTTGATCTTCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: EAVAIRPGLPYV*VLFVEVLDLLL Trigger: CAACAGAAGATCAAGGACCTCCACAAAAAGTACTCATACATACGGAAGACCCGGCCTGATGGCAACTGCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025679.11 ENSMUST00000123594.8 ENSMUST00000142085.2 |
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