Pregenerated sensors for OTT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094885Ensembl transcript IDs: ENSMUST00000177554.2, ENSMUST00000177606.8, ENSMUST00000179348.8
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGCTTAAGTTCTCATTCTATTATTaGTCATCCTGGCTTCTCGAA | + |
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Preference number: 2 (lower is better) Translates to: IAFVHKTFLSLVWVPELKFSFYY*SSWLLE Trigger: TTCGAGAAGCCAGGATGAGCAATAATAGAATGAGAA...CTTAAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTAACATTGAATTCTCATTCTATTATTaGTCATCCTGGCTTCTCGAA | + |
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Preference number: 2 (lower is better) Translates to: WVPELKDYGKLHSFSNIEFSFYY*SSWLLE Trigger: TTCGAGAAGCCAGGATGAGCAATAATAGAATGAGAA...TTCAATGTTAGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| 3UTR-3UTR GCA 90 bp | GCATTCATCTTGCTCATCTCCTTGTTCTTTTATGCAAACAGTACTAAACACTTTTTCTCATTCTATTATTaGTCATCCTGGCTTCTCGAA | + |
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Preference number: 2 (lower is better) Translates to: AFILLISLFFYANSTKHFFSFYY*SSWLLE Trigger: TTCGAGAAGCCAGGATGAGCAATAATAGAATGAGAA...AAAGTGTTTAGTACTGTTTGCATAAAAGAACAAGGAGATGAGCAAGATGAATGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTTATCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTAACCAGCATTCATCTTaGTCATCTCCTTGTTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: FLSLVWVPELKDYGKLHSNQHSS*SSPCSF Trigger: AAAAGAACAAGGAGATGAGCAAGATGAATGCTGGTT...ACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGATAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| 3UTR-3UTR GCA 90 bp | TCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTAACCAGCATTCATCTTaGTCATCTCCTTGTTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SFTWIAFVHKTFLSLVWVNQHSS*SSPCSF Trigger: AAAAGAACAAGGAGATGAGCAAGATGAATGCTGGTT...AACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| 3UTR-3UTR CAA 90 bp | ACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGAAACCAGCATTCATCTaGCTCATCTCCTTGTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: TWIAFVHKTFLSLVWVPEKPAFI*LISLFF Trigger: AAAGAACAAGGAGATGAGCAAGATGAATGCTGGTTT...CTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| 3UTR-3UTR CAA 90 bp | CAGTTGAAGTCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTAAACCAGCATTCATCTaGCTCATCTCCTTGTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QLKSFTWIAFVHKTFLSLKPAFI*LISLFF Trigger: AAAGAACAAGGAGATGAGCAAGATGAATGCTGGTTT...AAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGACTTCAACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| 3UTR-3UTR CAA 90 bp | CAGTTGAAGTCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTCTTAAAACAACCCCATaGAAACCAGCATTCATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QLKSFTWIAFVHKTFLSLLKTTP*KPAFIL Trigger: CAAGATGAATGCTGGTTTCAATGGGGTTGTTTTAAG...AAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGACTTCAACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTTATCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTCTTAAAACAACCCCATaGAAACCAGCATTCATCTTG | + |
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Preference number: 3 (lower is better) Translates to: FLSLVWVPELKDYGKLHSLKTTP*KPAFIL Trigger: CAAGATGAATGCTGGTTTCAATGGGGTTGTTTTAAG...ACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGATAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR GCA 90 bp | CCCGAAGGAAAAGGCAGTTTAGTCTTCAGGTCTTCTCATTCTATTATTGCTCATCGTGGCCATGAGATCTaGCAATGTGGTGGTCATGAG | + |
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Preference number: 4 (lower is better) Translates to: PEGKGSLVFRSSHSIIAHRGHEI*QCGGHE Trigger: CTCATGACCACCACATTGGCAGATCTCATGGCCACG...ATGAGCAATAATAGAATGAGAAGACCTGAAGACTAAACTGCCTTTTCCTTCGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | CCCGAAGGAAAAGGCAGTTTAGTCTTCAGGTCTTCTCATTCTATTATTGCTCATGTCATGACCTCTCTGTaGCTGGTTGTTCTGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PEGKGSLVFRSSHSIIAHVMTSL*LVVLTS Trigger: AGAGGTCAGAACAACCAGTCACAGAGAGGTCATGAC...ATGAGCAATAATAGAATGAGAAGACCTGAAGACTAAACTGCCTTTTCCTTCGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | ACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGGACATGAGATCTCTCTaGCTGAACAGGAGCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TWIAFVHKTFLSLVWVPEDMRSL*LNRSSP Trigger: AGGAGAGCTCCTGTTCAGTCAGAGAGATCTCATGTC...CTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | CCCGAAGGAAAAGGCAGTTTAGTCTTCAGGTCTTCTCATTCTATTATTGCTCATAGGATGTGGTCTCACTaGGAGTTGATTGTGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: PEGKGSLVFRSSHSIIAHRMWSH*ELIVWS Trigger: AGACCACACAATCAACTCTCAGTGAGACCACATCCT...ATGAGCAATAATAGAATGAGAAGACCTGAAGACTAAACTGCCTTTTCCTTCGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | CCCGAAGGAAAAGGCAGTTTAGTCTTCAGGTCTTCTCATTCTATTATTGCTCATCTCCCTCTTTGGACTTaGTTATCTCTCTCTGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PEGKGSLVFRSSHSIIAHLPLWT*LSLSVW Trigger: CCACACAGAGAGAGATAATCAAGTCCAAAGAGGGAG...ATGAGCAATAATAGAATGAGAAGACCTGAAGACTAAACTGCCTTTTCCTTCGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | ATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGCTTAAGGACATGAGATCTCTCTaGCTGAACAGGAGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IAFVHKTFLSLVWVPELKDMRSL*LNRSSP Trigger: AGGAGAGCTCCTGTTCAGTCAGAGAGATCTCATGTC...CTTAAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | ACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGTCTGAGTGGCCATGTTaGAGCCTAACTGCATGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TWIAFVHKTFLSLVWVPESEWPC*SLTAWF Trigger: AAACCATGCAGTTAGGCTTCAACATGGCCACTCAGA...CTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | ACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGCTCCCTCTTTGGACTTaGTTATCTCTCTCTGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TWIAFVHKTFLSLVWVPELPLWT*LSLSVW Trigger: CCACACAGAGAGAGATAATCAAGTCCAAAGAGGGAG...CTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | ACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGGTGATAAGCTCTCCCTaGGTGGTCATGATGAGATCT | + |
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Preference number: 4 (lower is better) Translates to: TWIAFVHKTFLSLVWVPEVISSP*VVMMRS Trigger: AGATCTCATCATGACCACTCAGGGAGAGCTTATCAC...CTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | TCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTGTCATGACCTCTCTGTaGCTGGTTGTTCTGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLVWVPELKDYGKLHSFSVMTSL*LVVLTS Trigger: AGAGGTCAGAACAACCAGTCACAGAGAGGTCATGAC...AGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR GCA 90 bp | TCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCGTGGCCATGAGATCTaGCAATGTGGTGGTCATGAG | + |
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Preference number: 4 (lower is better) Translates to: SFTWIAFVHKTFLSLVWVRGHEI*QCGGHE Trigger: CTCATGACCACCACATTGGCAGATCTCATGGCCACG...AACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR GCA 90 bp | GCATTCATCTTGCTCATCTCCTTGTTCTTTTATGCAAACAGTACTAAACACTTTCGTGGCCATGAGATCTaGCAATGTGGTGGTCATGAG | + |
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Preference number: 4 (lower is better) Translates to: AFILLISLFFYANSTKHFRGHEI*QCGGHE Trigger: CTCATGACCACCACATTGGCAGATCTCATGGCCACG...AAAGTGTTTAGTACTGTTTGCATAAAAGAACAAGGAGATGAGCAAGATGAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR GCA 90 bp | GCATTCATCTTGCTCATCTCCTTGTTCTTTTATGCAAACAGTACTAAACACTTTCACTCTCTTCAGCACTaGTGTAGCCGTCTTCTAGCG | + |
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Preference number: 4 (lower is better) Translates to: AFILLISLFFYANSTKHFHSLQH*CSRLLA Trigger: CGCTAGAAGACGGCTACAGCAGTGCTGAAGAGAGTG...AAAGTGTTTAGTACTGTTTGCATAAAAGAACAAGGAGATGAGCAAGATGAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR GCA 90 bp | CAGTTGAAGTCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTCACTCTCTTCAGCACTaGTGTAGCCGTCTTCTAGCG | + |
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Preference number: 4 (lower is better) Translates to: QLKSFTWIAFVHKTFLSLHSLQH*CSRLLA Trigger: CGCTAGAAGACGGCTACAGCAGTGCTGAAGAGAGTG...AAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGACTTCAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | TGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTAACATTGAAGACATGAGATCTCTCTaGCTGAACAGGAGCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: WVPELKDYGKLHSFSNIEDMRSL*LNRSSP Trigger: AGGAGAGCTCCTGTTCAGTCAGAGAGATCTCATGTC...TTCAATGTTAGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | TGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTAACATTGAAATGAAGTGGTCTACCTaGGAGGTCAGGATGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: WVPELKDYGKLHSFSNIEMKWST*EVRMWS Trigger: AGACCACATCCTGACCTCTCAGGTAGACCACTTCAT...TTCAATGTTAGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | CAGTTGAAGTCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTATGAAGTGGTCTACCTaGGAGGTCAGGATGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QLKSFTWIAFVHKTFLSLMKWST*EVRMWS Trigger: AGACCACATCCTGACCTCTCAGGTAGACCACTTCAT...AAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGACTTCAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | TCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTATGAAGTGGTCTACCTaGGAGGTCAGGATGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SFTWIAFVHKTFLSLVWVMKWST*EVRMWS Trigger: AGACCACATCCTGACCTCTCAGGTAGACCACTTCAT...AACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | TCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTTCTGAGTGGCCATGTTaGAGCCTAACTGCATGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SLVWVPELKDYGKLHSFSSEWPC*SLTAWF Trigger: AAACCATGCAGTTAGGCTTCAACATGGCCACTCAGA...AGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | ATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGCTTAAGGTGATAAGCTCTCCCTaGGTGGTCATGATGAGATCT | + |
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Preference number: 4 (lower is better) Translates to: IAFVHKTFLSLVWVPELKVISSP*VVMMRS Trigger: AGATCTCATCATGACCACTCAGGGAGAGCTTATCAC...CTTAAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | ATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGCTTAAGGTTCTGACCTCTCCATaGCTGGTTAAGATCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IAFVHKTFLSLVWVPELKVLTSP*LVKISP Trigger: TGGAGAGATCTTAACCAGTCATGGAGAGGTCAGAAC...CTTAAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | CAGTTGAAGTCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTCATGACCTCTCTGTaGCTGGTTGTTCTGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: QLKSFTWIAFVHKTFLSLVMTSL*LVVLTS Trigger: AGAGGTCAGAACAACCAGTCACAGAGAGGTCATGAC...AAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGACTTCAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | CCCGAAGGAAAAGGCAGTTTAGTCTTCAGGTCTTCTCATTCTATTATTGCTCATGGCCATGTAAACTCCTaGAGAACAATTGGATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: PEGKGSLVFRSSHSIIAHGHVNS*RTIGFF Trigger: AAAGAATCCAATTGTTCTTCAGGAGTTTACATGGCC...ATGAGCAATAATAGAATGAGAAGACCTGAAGACTAAACTGCCTTTTCCTTCGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | TTCTTATCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTCCTGAATCGATTACATaGTCTTCTGGAATCGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: FLSLVWVPELKDYGKLHSPESIT*SSGIVA Trigger: GGCCACGATTCCAGAAGATCATGTAATCGATTCAGG...ACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGATAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | CAGTTGAAGTCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTCCTGAATCGATTACATaGTCTTCTGGAATCGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: QLKSFTWIAFVHKTFLSLPESIT*SSGIVA Trigger: GGCCACGATTCCAGAAGATCATGTAATCGATTCAGG...AAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGACTTCAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | GCATTCATCTTGCTCATCTCCTTGTTCTTTTATGCAAACAGTACTAAACACTTTCCTGAATCGATTACATaGTCTTCTGGAATCGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: AFILLISLFFYANSTKHFPESIT*SSGIVA Trigger: GGCCACGATTCCAGAAGATCATGTAATCGATTCAGG...AAAGTGTTTAGTACTGTTTGCATAAAAGAACAAGGAGATGAGCAAGATGAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | CAGTTGAAGTCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTATTGTGTGGTCTATCTaGGAGGTCATGGTGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QLKSFTWIAFVHKTFLSLIVWSI*EVMVWS Trigger: AGACCACACCATGACCTCTCAGATAGACCACACAAT...AAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGACTTCAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | TTCTTATCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTATTGTGTGGTCTATCTaGGAGGTCATGGTGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: FLSLVWVPELKDYGKLHSIVWSI*EVMVWS Trigger: AGACCACACCATGACCTCTCAGATAGACCACACAAT...ACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGATAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | GCATTCATCTTGCTCATCTCCTTGTTCTTTTATGCAAACAGTACTAAACACTTTATTGTGTGGTCTATCTaGGAGGTCATGGTGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: AFILLISLFFYANSTKHFIVWSI*EVMVWS Trigger: AGACCACACCATGACCTCTCAGATAGACCACACAAT...AAAGTGTTTAGTACTGTTTGCATAAAAGAACAAGGAGATGAGCAAGATGAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | CAGTTGAAGTCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTAGGATGTGGTCTCACTaGGAGTTGATTGTGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QLKSFTWIAFVHKTFLSLRMWSH*ELIVWS Trigger: AGACCACACAATCAACTCTCAGTGAGACCACATCCT...AAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGACTTCAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | TGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTAACATTGAAAGGATGTGGTCTCACTaGGAGTTGATTGTGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: WVPELKDYGKLHSFSNIERMWSH*ELIVWS Trigger: AGACCACACAATCAACTCTCAGTGAGACCACATCCT...TTCAATGTTAGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | CAGTTGAAGTCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTTCTGAGTGGCCATGTTaGAGCCTAACTGCATGGTTT | + |
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Preference number: 4 (lower is better) Translates to: QLKSFTWIAFVHKTFLSLSEWPC*SLTAWF Trigger: AAACCATGCAGTTAGGCTTCAACATGGCCACTCAGA...AAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGACTTCAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS-3UTR TCA 90 bp | TTCTTATCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTCTCCCTCTTTGGACTTaGTTATCTCTCTCTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLSLVWVPELKDYGKLHSLPLWT*LSLSVW Trigger: CCACACAGAGAGAGATAATCAAGTCCAAAGAGGGAG...ACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGATAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | TCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTGTGATAAGCTCTCCCTaGGTGGTCATGATGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SFTWIAFVHKTFLSLVWVVISSP*VVMMRS Trigger: AGATCTCATCATGACCACTCAGGGAGAGCTTATCAC...AACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTAACATTGAAGTTCTGACCTCTCCATaGCTGGTTAAGATCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVPELKDYGKLHSFSNIEVLTSP*LVKISP Trigger: TGGAGAGATCTTAACCAGTCATGGAGAGGTCAGAAC...TTCAATGTTAGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | GCATTCATCTTGCTCATCTCCTTGTTCTTTTATGCAAACAGTACTAAACACTTTGTTCTGACCTCTCCATaGCTGGTTAAGATCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFILLISLFFYANSTKHFVLTSP*LVKISP Trigger: TGGAGAGATCTTAACCAGTCATGGAGAGGTCAGAAC...AAAGTGTTTAGTACTGTTTGCATAAAAGAACAAGGAGATGAGCAAGATGAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CCA 90 bp | CCCGAAGGAAAAGGCAGTTTAGTCTTCAGGTCTTCTCATTCTATTATTGCTCATTGTCTCTCTTCTGATTaGTTTCCATTCCTCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PEGKGSLVFRSSHSIIAHCLSSD*FPFLLV Trigger: AACAAGGAGGAATGGAAACCAATCAGAAGAGAGACA...ATGAGCAATAATAGAATGAGAAGACCTGAAGACTAAACTGCCTTTTCCTTCGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | ACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGGTTAAGATCTCTCCATaGCTGGTTGTTATCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TWIAFVHKTFLSLVWVPEVKISP*LVVIRS Trigger: AGATCTGATAACAACCAGTCATGGAGAGATCTTAAC...CTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGCTTAAGGTTATGAGCTCTCCATaGCTGATCATTATGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IAFVHKTFLSLVWVPELKVMSSP*LIIMTS Trigger: AGAGGTCATAATGATCAGTCATGGAGAGCTCATAAC...CTTAAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CCA 90 bp | ACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGTGTCTCTCTTCTGATTaGTTTCCATTCCTCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TWIAFVHKTFLSLVWVPECLSSD*FPFLLV Trigger: AACAAGGAGGAATGGAAACCAATCAGAAGAGAGACA...CTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | ACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGTTAGACTTTCTAGGTTaGCTTGTCTTGTCAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TWIAFVHKTFLSLVWVPELDFLG*LVLSDE Trigger: TTCATCTGACAAGACAAGTCAACCTAGAAAGTCTAA...CTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGCTTAAGGTTAAGATCTCTCCATaGCTGGTTGTTATCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: IAFVHKTFLSLVWVPELKVKISP*LVVIRS Trigger: AGATCTGATAACAACCAGTCATGGAGAGATCTTAAC...CTTAAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | TCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTGTTATGAGCTCTCCATaGCTGATCATTATGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFTWIAFVHKTFLSLVWVVMSSP*LIIMTS Trigger: AGAGGTCATAATGATCAGTCATGGAGAGCTCATAAC...AACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | GCATTCATCTTGCTCATCTCCTTGTTCTTTTATGCAAACAGTACTAAACACTTTGTTATGAGCTCTCCATaGCTGATCATTATGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AFILLISLFFYANSTKHFVMSSP*LIIMTS Trigger: AGAGGTCATAATGATCAGTCATGGAGAGCTCATAAC...AAAGTGTTTAGTACTGTTTGCATAAAAGAACAAGGAGATGAGCAAGATGAATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | TCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTTATCTTTCTCTTTCATaGAGCATCCATGACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLVWVPELKDYGKLHSFSYLSLS*SIHDWM Trigger: CATCCAGTCATGGATGCTTCATGAAAGAGAAAGATA...AGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGCTTAAGTATCTTTCTCTTTCATaGAGCATCCATGACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: IAFVHKTFLSLVWVPELKYLSLS*SIHDWM Trigger: CATCCAGTCATGGATGCTTCATGAAAGAGAAAGATA...CTTAAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CCA 90 bp | TCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTTGTCTCTCTTCTGATTaGTTTCCATTCCTCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLVWVPELKDYGKLHSFSCLSSD*FPFLLV Trigger: AACAAGGAGGAATGGAAACCAATCAGAAGAGAGACA...AGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGCTTAAGAGATCTCTCCATGACTaGTTGTTATCAGATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IAFVHKTFLSLVWVPELKRSLHD*LLSDLH Trigger: ATGGAGATCTGATAACAACCAGTCATGGAGAGATCT...CTTAAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CCA 90 bp | TCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTAGATCTCTCCATGACTaGTTGTTATCAGATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLVWVPELKDYGKLHSFSRSLHD*LLSDLH Trigger: ATGGAGATCTGATAACAACCAGTCATGGAGAGATCT...AGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CCA 90 bp | TCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTTCCATTTCTTCCTCTTaGACCATGGTATCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLVWVPELKDYGKLHSFSSISSS*TMVSFS Trigger: AGAGAAAGATACCATGGTCCAAGAGGAAGAAATGGA...AGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGCTTAAGTCCATTTCTTCCTCTTaGACCATGGTATCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IAFVHKTFLSLVWVPELKSISSS*TMVSFS Trigger: AGAGAAAGATACCATGGTCCAAGAGGAAGAAATGGA...CTTAAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGCTTAAGTTAGACTTTCTAGGTTaGCTTGTCTTGTCAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: IAFVHKTFLSLVWVPELKLDFLG*LVLSDE Trigger: TTCATCTGACAAGACAAGTCAACCTAGAAAGTCTAA...CTTAAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | GCATTCATCTTGCTCATCTCCTTGTTCTTTTATGCAAACAGTACTAAACACTTTGGCCATGTAAACTCCTaGAGAACAATTGGATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AFILLISLFFYANSTKHFGHVNS*RTIGFF Trigger: AAAGAATCCAATTGTTCTTCAGGAGTTTACATGGCC...AAAGTGTTTAGTACTGTTTGCATAAAAGAACAAGGAGATGAGCAAGATGAATGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | GCATTCATCTTGCTCATCTCCTTGTTCTTTTATGCAAACAGTACTAAACACTTTGTTAAGATCTCTCCATaGCTGGTTGTTATCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: AFILLISLFFYANSTKHFVKISP*LVVIRS Trigger: AGATCTGATAACAACCAGTCATGGAGAGATCTTAAC...AAAGTGTTTAGTACTGTTTGCATAAAAGAACAAGGAGATGAGCAAGATGAATGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | TCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTTATCTTTCTCTTTCATaGAGCATCCATGACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SFTWIAFVHKTFLSLVWVYLSLS*SIHDWM Trigger: CATCCAGTCATGGATGCTTCATGAAAGAGAAAGATA...AACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CCA 90 bp | TCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTCTCCTGAAGAACAATTaGATTCTTTCTTGTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLVWVPELKDYGKLHSFSLLKNN*ILSCCS Trigger: GCTACAACAAGAAAGAATCCAATTGTTCTTCAGGAG...AGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CCA 90 bp | GCATTCATCTTGCTCATCTCCTTGTTCTTTTATGCAAACAGTACTAAACACTTTAGATCTCTCCATGACTaGTTGTTATCAGATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AFILLISLFFYANSTKHFRSLHD*LLSDLH Trigger: ATGGAGATCTGATAACAACCAGTCATGGAGAGATCT...AAAGTGTTTAGTACTGTTTGCATAAAAGAACAAGGAGATGAGCAAGATGAATGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTATCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTCCATTTCTTCCTCTTaGACCATGGTATCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLSLVWVPELKDYGKLHSSISSS*TMVSFS Trigger: AGAGAAAGATACCATGGTCCAAGAGGAAGAAATGGA...ACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGATAAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR TCA 90 bp | GCATTCATCTTGCTCATCTCCTTGTTCTTTTATGCAAACAGTACTAAACACTTTTTAGACTTTCTAGGTTaGCTTGTCTTGTCAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: AFILLISLFFYANSTKHFLDFLG*LVLSDE Trigger: TTCATCTGACAAGACAAGTCAACCTAGAAAGTCTAA...AAAGTGTTTAGTACTGTTTGCATAAAAGAACAAGGAGATGAGCAAGATGAATGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTATCACTTGTATGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTCTCCTGAAGAACAATTaGATTCTTTCTTGTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLSLVWVPELKDYGKLHSLLKNN*ILSCCS Trigger: GCTACAACAAGAAAGAATCCAATTGTTCTTCAGGAG...ACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGATAAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| 3UTR CAA 72 bp | CATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTaGTATGGGTTCCAGAGCTTAAGGATTATGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HGLLLCIKPSYH*YGFQSLRIMVN Trigger: ATTTACCATAATCCTTAAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS GCA 90 bp | TCACGTCTGTGTCCTCTCCCTCGCGGATGTCCAGGGAAAAATGCTTaGCCTCTGGAGCTTTCTGACTGTATGTCATTCTCCTCATTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SRLCPLPRGCPGKNA*PLELSDCMSFSSLY Trigger: ATACAATGAGGAGAATGACATACAGTCAGAAAGCTCCAGAGGGCAAGCATTTTTCCCTGGACATCCGCGAGGGAGAGGACACAGACGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS CCA 90 bp | TGTGTCCTCTCCCTCGCGGATGTCCAGGGAAAAATGCTTGCCCTCTaGAGCTTTCTGACTGTATGTCATTCTCCTCATTGTATTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CVLSLADVQGKMLAL*SFLTVCHSPHCILL Trigger: AAGAAGAATACAATGAGGAGAATGACATACAGTCAGAAAGCTCCAGAGGGCAAGCATTTTTCCCTGGACATCCGCGAGGGAGAGGACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS TCA 90 bp | CCCTCGCGGATGTCCAGGGAAAAATGCTTGCCCTCTGGAGCTTTCTaGCTGTATGTCATTCTCCTCATTGTATTCTTCTTCAGAATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSRMSREKCLPSGAF*LYVILLIVFFFRIS Trigger: GCTAATTCTGAAGAAGAATACAATGAGGAGAATGACATACAGTCAGAAAGCTCCAGAGGGCAAGCATTTTTCCCTGGACATCCGCGAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS GCA 90 bp | AGCGACAGGTTAGTCTGTCAAAACTTTCATCACTCTCTTCAGCACTaGTGTAGCCGTCTTCTAGCGCTACATTCAGTTCAACTGTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SDRLVCQNFHHSLQH*CSRLLALHSVQLSH Trigger: ATGAGACAGTTGAACTGAATGTAGCGCTAGAAGACGGCTACAGCAGTGCTGAAGAGAGTGATGAAAGTTTTGACAGACTAACCTGTCGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS TCA 90 bp | TGCCAATGTGGTGGTCATGAGATTGGGAGAGGCCATGTAAACTCCTaGAGAACAATTGGATTCTTTCTTGTTGTAGCTGTCTCTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CQCGGHEIGRGHVNS*RTIGFFLVVAVSLL Trigger: CAGAAGAGAGACAGCTACAACAAGAAAGAATCCAATTGTTCTTCAGGAGTTTACATGGCCTCTCCCAATCTCATGACCACCACATTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CAA 90 bp | ACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGGTCCATTTCTTCCTCTaGGACCATGGTATCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TWIAFVHKTFLSLVWVPEVHFFL*DHGIFL Trigger: GAGAAAGATACCATGGTCCAAGAGGAAGAAATGGAC...CTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CAA 90 bp | ATTGCTTTTGTGCATAAAACCTTCTTATCACTTGTATGGGTTCCAGAGCTTAAGTCTCCCTCTTTGGACTaGATTATCTCTCTCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IAFVHKTFLSLVWVPELKSPSLD*IISLCV Trigger: CACACAGAGAGAGATAATCAAGTCCAAAGAGGGAGA...CTTAAGCTCTGGAACCCATACAAGTGATAAGAAGGTTTTATGCACAAAAGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTTCCAGAGCTTAAGGATTATGGTAAATTACACAGTTTCTCTAACATTGAATCTCCCTCTTTGGACTaGATTATCTCTCTCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WVPELKDYGKLHSFSNIESPSLD*IISLCV Trigger: CACACAGAGAGAGATAATCAAGTCCAAAGAGGGAGA...TTCAATGTTAGAGAAACTGTGTAATTTACCATAATCCTTAAGCTCTGGAACCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CAA 90 bp | GCATTCATCTTGCTCATCTCCTTGTTCTTTTATGCAAACAGTACTAAACACTTTTCTCCCTCTTTGGACTaGATTATCTCTCTCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AFILLISLFFYANSTKHFSPSLD*IISLCV Trigger: CACACAGAGAGAGATAATCAAGTCCAAAGAGGGAGA...AAAGTGTTTAGTACTGTTTGCATAAAAGAACAAGGAGATGAGCAAGATGAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CAA 90 bp | GCATTCATCTTGCTCATCTCCTTGTTCTTTTATGCAAACAGTACTAAACACTTTTCTCTCCATGACTGGTaGTTATCAGATCTCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: AFILLISLFFYANSTKHFSLHDW*LSDLHD Trigger: GTCATGGAGATCTGATAACAACCAGTCATGGAGAGA...AAAGTGTTTAGTACTGTTTGCATAAAAGAACAAGGAGATGAGCAAGATGAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTGAAGTCATTCACATGGATTGCTTTTGTGCATAAAACCTTCTTATCACTTTCTCTCCATGACTGGTaGTTATCAGATCTCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: QLKSFTWIAFVHKTFLSLSLHDW*LSDLHD Trigger: GTCATGGAGATCTGATAACAACCAGTCATGGAGAGA...AAGTGATAAGAAGGTTTTATGCACAAAAGCAATCCATGTGAATGACTTCAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
||
| CDS-3UTR CAA 90 bp | GCATTCATCTTGCTCATCTCCTTGTTCTTTTATGCAAACAGTACTAAACACTTTGTCCATTTCTTCCTCTaGGACCATGGTATCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AFILLISLFFYANSTKHFVHFFL*DHGIFL Trigger: GAGAAAGATACCATGGTCCAAGAGGAAGAAATGGAC...AAAGTGTTTAGTACTGTTTGCATAAAAGAACAAGGAGATGAGCAAGATGAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS TCA 72 bp | CTACCTGAGAGGTCAGGATGTGGTCTCACTGAGAGTTaGTTGTGTGGTCTATCTGAGAGGTCATGGTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: LPERSGCGLTES*LCGLSERSWCG Trigger: ACCACACCATGACCTCTCAGATAGACCACACAATCAACTCTCAGTGAGACCACATCCTGACCTCTCAGGTAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS TCA 72 bp | AGACGATCTGTCAATTTCTGGCTCAGATCCTGGTGGTaGTGCATCCCTTGGTCCATTTCTTCCTCTTGGACC | + |
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Preference number: 6 (lower is better) Translates to: RRSVNFWLRSWW*CIPWSISSSWT Trigger: GGTCCAAGAGGAAGAAATGGACCAAGGGATGCATCACCACCAGGATCTGAGCCAGAAATTGACAGATCGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS GCA 72 bp | GATTACATGATCTTCTGGAATCGTGGCCATGAGATCTaGCAATGTGGTGGTCATGAGATTGGGAGAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: DYMIFWNRGHEI*QCGGHEIGRGH Trigger: ATGGCCTCTCCCAATCTCATGACCACCACATTGGCAGATCTCATGGCCACGATTCCAGAAGATCATGTAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS CAA 72 bp | TATCAGATCTCCATGACTGGTTGTTATGAGCTCTCCTaGCATGGCCGTGATAAGCTCTCCCTGAGTGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: YQISMTGCYELS*HGRDKLSLSGH Trigger: ATGACCACTCAGGGAGAGCTTATCACGGCCATGCAAGGAGAGCTCATAACAACCAGTCATGGAGATCTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS CAA 72 bp | CTGGTGGTGATGCATCCCTTGGTCCATTTCTTCCTCTaGGACCATGGTATCTTTCTCTTTCATGAAGCATCC | + |
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Preference number: 6 (lower is better) Translates to: LVVMHPLVHFFL*DHGIFLFHEAS Trigger: GGATGCTTCATGAAAGAGAAAGATACCATGGTCCAAGAGGAAGAAATGGACCAAGGGATGCATCACCACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS TCA 72 bp | ATTATCTCTCTCTGTGTGGCCAGGATGAGCTATCCCTaGGTTGTTAGGAAGAACTCTCTCTGTATGGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: IISLCVARMSYP*VVRKNSLCMGK Trigger: CTTACCCATACAGAGAGAGTTCTTCCTAACAACTCAGGGATAGCTCATCCTGGCCACACAGAGAGAGATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS GCA 72 bp | TTAGTCTGTCAAAACTTTCATCACTCTCTTCAGCACTaGTGTAGCCGTCTTCTAGCGCTACATTCAGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: LVCQNFHHSLQH*CSRLLALHSVQ Trigger: TTGAACTGAATGTAGCGCTAGAAGACGGCTACAGCAGTGCTGAAGAGAGTGATGAAAGTTTTGACAGACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS TCA 72 bp | TTTCTTCCTCTTGGACCATGGTATCTTTCTCTTTCATaGAGCATCCATGACTGGATGCTACTAGATCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: FLPLGPWYLSLS*SIHDWMLLDLN Trigger: ATTGAGATCTAGTAGCATCCAGTCATGGATGCTTCATGAAAGAGAAAGATACCATGGTCCAAGAGGAAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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| CDS TCA 72 bp | ATTGGTTTCCATTCCTCCTTGTTAGACTTTCTAGGTTaGCTTGTCTTGTCAGATGAAGTAGAGGATGATTTG | + |
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Preference number: 6 (lower is better) Translates to: IGFHSSLLDFLG*LVLSDEVEDDL Trigger: CAAATCATCCTCTACTTCATCTGACAAGACAAGTCAACCTAGAAAGTCTAACAAGGAGGAATGGAAACCAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000177554.2 ENSMUST00000177606.8 ENSMUST00000179348.8 |
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