Pregenerated sensors for OTP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021685Ensembl transcript IDs: ENSMUST00000022195.13
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCTAAGTCCGCTCCAGCCACCCAATCCACTGCCATGTTCCTCCTaGGACGCCTTCCCTTCTACCCCCTCACAGCTGAGCTTAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: CLSPLQPPNPLPCSS*DAFPSTPSQLSLRK Trigger: TTTTCTTAAGCTCAGCTGTGAGGGGGTAGAAGGGAAGGCGTCTCAGGAGGAACATGGCAGTGGATTGGGTGGCTGGAGCGGACTTAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR GCA 90 bp | CAAACTATAACAACGAAAGCGGTCTTTTGCAAGCCAATCGAGGGTTaGATGGACAGTGACTGGATAGACAGGGTAGGGTGGTGGTCCGGG | + |
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Preference number: 1 (lower is better) Translates to: QTITTKAVFCKPIEG*MDSDWIDRVGWWSG Trigger: CCCGGACCACCACCCTACCCTGTCTATCCAGTCACTGTCCATGCAACCCTCGATTGGCTTGCAAAAGACCGCTTTCGTTGTTATAGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR GCA 90 bp | GAAAGGCCTATCAAAATGGGAAAGACCACCTCTTCATCACATAAGTaGCTAAGTCCGCTCCAGCCACCCAATCCACTGCCATGTTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: ERPIKMGKTTSSSHK*LSPLQPPNPLPCSS Trigger: GGAGGAACATGGCAGTGGATTGGGTGGCTGGAGCGGACTTAGGCACTTATGTGATGAAGAGGTGGTCTTTCCCATTTTGATAGGCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR TCA 90 bp | TGTTTCTGCCCACAAACCAGTCCATTGGTGTCTGATTTCAGATCCTaGGTCGACTCCCTGGTAAGTAAAATGGCGGGAAGGATGCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: CFCPQTSPLVSDFRS*VDSLVSKMAGRMLS Trigger: AGAAAGCATCCTTCCCGCCATTTTACTTACCAGGGAGTCGACTCAGGATCTGAAATCAGACACCAATGGACTGGTTTGTGGGCAGAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR TCA 90 bp | TTCTGTTCTCTGGGTTTGGATTTGACCAGCACATGCAGAAAGAGCTaGTTGTGTTTCTCTGTACAAAGTTGCAGGGTTGTAGATGTCCGC | + |
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Preference number: 1 (lower is better) Translates to: FCSLGLDLTSTCRKS*LCFSVQSCRVVDVR Trigger: GCGGACATCTACAACCCTGCAACTTTGTACAGAGAAACACAATCAGCTCTTTCTGCATGTGCTGGTCAAATCCAAACCCAGAGAACAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR GCA 90 bp | GGTAGCAATGCTTGTCCACCTTTAAGACAAAAATCCCTAGCATTGTaGTGTACCTTGAACACGTCCATGTGTGACCAAGATGCACTGTGT | + |
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Preference number: 1 (lower is better) Translates to: GSNACPPLRQKSLAL*CTLNTSMCDQDALC Trigger: ACACAGTGCATCTTGGTCACACATGGACGTGTTCAAGGTACAGCACAATGCTAGGGATTTTTGTCTTAAAGGTGGACAAGCATTGCTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR TCA 90 bp | GTTTGTTCATTCTTAGAAAGCGCTTCTGTTCTCTGGGTTTGGATTTaGCCAGCACATGCAGAAAGAGCTGATTGTGTTTCTCTGTACAAA | + |
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Preference number: 1 (lower is better) Translates to: VCSFLESASVLWVWI*PAHAERADCVSLYK Trigger: TTTGTACAGAGAAACACAATCAGCTCTTTCTGCATGTGCTGGTCAAATCCAAACCCAGAGAACAGAAGCGCTTTCTAAGAATGAACAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR-3UTR CCA 90 bp | GGGCGCGGGAGCAGGGACGTGAGGCTCGGGGAAAGACTGAGCCCAAAGGGAGGCGAAGTGTGGTCGGGGTaGCTGCCAGGCAGAGGCCGG | + |
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Preference number: 2 (lower is better) Translates to: GRGSRDVRLGERLSPKGGEVWSG*LPGRGR Trigger: CCGGCCTCTGCCTGGCAGCCACCCCGACCACACTTC...GCCTCCCTTTGGGCTCAGTCTTTCCCCGAGCCTCACGTCCCTGCTCCCGCGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR-3UTR GCA 90 bp | GCGCTTCTGTTCTCTGGGTTTGGATTTGACCAGCACATGCAGAAAGAGCTGATTTGTGGTCGGGGTGGCTaGCAGGCAGAGGCCGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: ALLFSGFGFDQHMQKELICGRGG*QAEAGR Trigger: CCTCCCGGCCTCTGCCTGGCAGCCACCCCGACCACA...AATCAGCTCTTTCTGCATGTGCTGGTCAAATCCAAACCCAGAGAACAGAAGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR CAA 90 bp | GACCAGCACATGCAGAAAGAGCTGATTGTGTTTCTCTGTACAAAGTaGCAGGGTTGTAGATGTCCGCCTGCACCCACCGGTGGCCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: DQHMQKELIVFLCTK*QGCRCPPAPTGGRQ Trigger: CTGCCGGCCACCGGTGGGTGCAGGCGGACATCTACAACCCTGCAACTTTGTACAGAGAAACACAATCAGCTCTTTCTGCATGTGCTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR-3UTR GCA 90 bp | GAAAAAGGAAGCAAACGAACGCCAGTCTTGAAGGATCTAGAAAAGAGATGTGGCGGGAAGGATGCTTTCTaGCGGGCGCGGGAGCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: EKGSKRTPVLKDLEKRCGGKDAF*RAREQG Trigger: TCCCTGCTCCCGCGCCCGGCAGAAAGCATCCTTCCC...GCCACATCTCTTTTCTAGATCCTTCAAGACTGGCGTTCGTTTGCTTCCTTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR-3UTR TCA 90 bp | CGTGAGCTATGGTGCGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGATTTCAGATCCTaGGTCGACTCCCTGGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: RELWCECVCVCVCVCVCVSDFRS*VDSLVS Trigger: ACTTACCAGGGAGTCGACTCAGGATCTGAAATCAGA...CACACACACACACACACACACACACACACACACACACTCGCACCATAGCTCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR-3UTR GCA 90 bp | GCGGTTGGTAGCAATGCTTGTCCACCTTTAAGACAAAAATCCCTAGCATTGTGCTGCACTGTGTGTGTTTaGGCGCGCGCGTGTAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: AVGSNACPPLRQKSLALCCTVCV*ARACSV Trigger: GACACTACACGCGCGCGCGCAAACACACACAGTGCA...GCACAATGCTAGGGATTTTTGTCTTAAAGGTGGACAAGCATTGCTACCAACCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR-3UTR TCA 90 bp | GAAAAAGGAAGCAAACGAACGCCAGTCTTGAAGGATCTAGAAAAGAGATGTGGCGGGTTGCATGGACAGTaGCTGGATAGACAGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: EKGSKRTPVLKDLEKRCGGLHGQ*LDRQGR Trigger: CCTACCCTGTCTATCCAGTCACTGTCCATGCAACCC...GCCACATCTCTTTTCTAGATCCTTCAAGACTGGCGTTCGTTTGCTTCCTTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR-3UTR CCA 90 bp | CGTGAGCTATGGTGCGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACAAACCAGTCCATTaGTGTCTGATTTCAGATCCT | + |
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Preference number: 2 (lower is better) Translates to: RELWCECVCVCVCVCVCVHKPVH*CLISDP Trigger: AGGATCTGAAATCAGACACCAATGGACTGGTTTGTG...CACACACACACACACACACACACACACACACACACACTCGCACCATAGCTCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR CAA 90 bp | GCTTGTCCACCTTTAAGACAAAAATCCCTAGCATTGTGCTGTACCTaGAACACGTCCATGTGTGACCAAGATGCACTGTGTGTGTTTGCG | + |
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Preference number: 2 (lower is better) Translates to: ACPPLRQKSLALCCT*NTSMCDQDALCVFA Trigger: CGCAAACACACACAGTGCATCTTGGTCACACATGGACGTGTTCAAGGTACAGCACAATGCTAGGGATTTTTGTCTTAAAGGTGGACAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR CAA 90 bp | GTTGGTAGCAATGCTTGTCCACCTTTAAGACAAAAATCCCTAGCATaGTGCTGTACCTTGAACACGTCCATGTGTGACCAAGATGCACTG | + |
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Preference number: 2 (lower is better) Translates to: VGSNACPPLRQKSLA*CCTLNTSMCDQDAL Trigger: CAGTGCATCTTGGTCACACATGGACGTGTTCAAGGTACAGCACAATGCTAGGGATTTTTGTCTTAAAGGTGGACAAGCATTGCTACCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR-3UTR TCA 90 bp | GAAAAAGGAAGCAAACGAACGCCAGTCTTGAAGGATCTAGAAAAGAGATGTGGCCAGTCCATTGGTGTCTaGTTTCAGATCCTGAGTCGA | + |
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Preference number: 2 (lower is better) Translates to: EKGSKRTPVLKDLEKRCGQSIGV*FQILSR Trigger: TCGACTCAGGATCTGAAATCAGACACCAATGGACTG...GCCACATCTCTTTTCTAGATCCTTCAAGACTGGCGTTCGTTTGCTTCCTTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR TCA 72 bp | CCTAGCATTGTGCTGTACCTTGAACACGTCCATGTGTaGCCAAGATGCACTGTGTGTGTTTGCGCGCGCGCG | + |
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Preference number: 3 (lower is better) Translates to: PSIVLYLEHVHV*PRCTVCVCARA Trigger: CGCGCGCGCGCAAACACACACAGTGCATCTTGGTCACACATGGACGTGTTCAAGGTACAGCACAATGCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR TCA 72 bp | GGTCTTTTGCAAGCCAATCGAGGGTTGCATGGACAGTaGCTGGATAGACAGGGTAGGGTGGTGGTCCGGGAA | + |
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Preference number: 3 (lower is better) Translates to: GLLQANRGLHGQ*LDRQGRVVVRE Trigger: TTCCCGGACCACCACCCTACCCTGTCTATCCAGTCACTGTCCATGCAACCCTCGATTGGCTTGCAAAAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR-3UTR CAA 90 bp | GGTTGCATGGACAGTGACTGGATAGACAGGGTAGGGTGGTGGTCCGGGAAAGAAGCATTGTGCTGTACCTaGAACACGTCCATGTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: GCMDSDWIDRVGWWSGKEALCCT*NTSMCD Trigger: GTCACACATGGACGTGTTCAAGGTACAGCACAATGC...TTCTTTCCCGGACCACCACCCTACCCTGTCTATCCAGTCACTGTCCATGCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR GCA 72 bp | ACAACGAAAGCGGTCTTTTGCAAGCCAATCGAGGGTTaGATGGACAGTGACTGGATAGACAGGGTAGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: TTKAVFCKPIEG*MDSDWIDRVGW Trigger: CCACCCTACCCTGTCTATCCAGTCACTGTCCATGCAACCCTCGATTGGCTTGCAAAAGACCGCTTTCGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR-3UTR CAA 90 bp | CGTGAGCTATGGTGCGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCACAAACCAGTCCATaGGTGTCTGATTTCAGATCC | + |
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Preference number: 3 (lower is better) Translates to: RELWCECVCVCVCVCVCVPQTSP*VSDFRS Trigger: GGATCTGAAATCAGACACCAATGGACTGGTTTGTGG...CACACACACACACACACACACACACACACACACACACTCGCACCATAGCTCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR-3UTR CAA 90 bp | GCGCTTCTGTTCTCTGGGTTTGGATTTGACCAGCACATGCAGAAAGAGCTGATTCCTCAAATGAGGCGGTaGGTAGCAATGCTTGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: ALLFSGFGFDQHMQKELIPQMRR*VAMLVH Trigger: GTGGACAAGCATTGCTACCAACCGCCTCATTTGAGG...AATCAGCTCTTTCTGCATGTGCTGGTCAAATCCAAACCCAGAGAACAGAAGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR TCA 72 bp | CCACAAACCAGTCCATTGGTGTCTGATTTCAGATCCTaGGTCGACTCCCTGGTAAGTAAAATGGCGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: PQTSPLVSDFRS*VDSLVSKMAGR Trigger: CCTTCCCGCCATTTTACTTACCAGGGAGTCGACTCAGGATCTGAAATCAGACACCAATGGACTGGTTTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR GCA 72 bp | ATCAAAATGGGAAAGACCACCTCTTCATCACATAAGTaGCTAAGTCCGCTCCAGCCACCCAATCCACTGCCA | + |
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Preference number: 3 (lower is better) Translates to: IKMGKTTSSSHK*LSPLQPPNPLP Trigger: TGGCAGTGGATTGGGTGGCTGGAGCGGACTTAGGCACTTATGTGATGAAGAGGTGGTCTTTCCCATTTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTTTCTaGCCACAAACCAGTCCATTGGTGTCTGATTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVCACF*PQTSPLVSDFR Trigger: TCTGAAATCAGACACCAATGGACTGGTTTGTGGGCAGAAACACGCACACACACACACACACACACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR TCA 72 bp | CTGGGTTTGGATTTGACCAGCACATGCAGAAAGAGCTaGTTGTGTTTCTCTGTACAAAGTTGCAGGGTTGTA | + |
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Preference number: 3 (lower is better) Translates to: LGLDLTSTCRKS*LCFSVQSCRVV Trigger: TACAACCCTGCAACTTTGTACAGAGAAACACAATCAGCTCTTTCTGCATGTGCTGGTCAAATCCAAACCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR GCA 72 bp | GCTTGTCCACCTTTAAGACAAAAATCCCTAGCATTGTaGTGTACCTTGAACACGTCCATGTGTGACCAAGAT | + |
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Preference number: 3 (lower is better) Translates to: ACPPLRQKSLAL*CTLNTSMCDQD Trigger: ATCTTGGTCACACATGGACGTGTTCAAGGTACAGCACAATGCTAGGGATTTTTGTCTTAAAGGTGGACAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GGCGGGAAGGATGCTTTCTGCCGGGCGCGGGAGCAGGGACGTGAGGCTCGGGGAGGGTTGGGGCCGCCCTaGGGCCCCGGCTGCTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GGKDAFCRAREQGREARGGLGPP*GPGCLS Trigger: AGACAAGCAGCCGGGGCCCCAGGGCGGCCCCAACCC...TCCCCGAGCCTCACGTCCCTGCTCCCGCGCCCGGCAGAAAGCATCCTTCCCGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR GCA 90 bp | GGGCGCGGGAGCAGGGACGTGAGGCTCGGGGAAAGACTGAGCCCAAAGGGAGGCGCGAGCCGGAGACGTTaGTGGGGCCGGGGAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GRGSRDVRLGERLSPKGGASRRR*WGRGGR Trigger: CCTCCCTCCCCGGCCCCAGCAACGTCTCCGGCTCGC...GCCTCCCTTTGGGCTCAGTCTTTCCCCGAGCCTCACGTCCCTGCTCCCGCGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR GCA 90 bp | GGCGGGAAGGATGCTTTCTGCCGGGCGCGGGAGCAGGGACGTGAGGCTCGGGGACGGGTCCGAGTTGGGTaGCAGGTCCCCTGGATGACC | + |
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Preference number: 4 (lower is better) Translates to: GGKDAFCRAREQGREARGRVRVG*QVPWMT Trigger: GGTCATCCAGGGGACCTGGCACCCAACTCGGACCCG...TCCCCGAGCCTCACGTCCCTGCTCCCGCGCCCGGCAGAAAGCATCCTTCCCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | AGGATGCTTTCTGCCGGGCGCGGGAGCAGGGACGTGAGGCTCGGGGAAAGACTGGCAGCCCCGCGCCGTTaGAGCCCGCCAGGCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: RMLSAGRGSRDVRLGERLAAPRR*SPPGCW Trigger: CCAACAGCCTGGCGGGCTCCAACGGCGCGGGGCTGC...CAGTCTTTCCCCGAGCCTCACGTCCCTGCTCCCGCGCCCGGCAGAAAGCATCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR GCA 90 bp | AGGATGCTTTCTGCCGGGCGCGGGAGCAGGGACGTGAGGCTCGGGGAAAGACTGGGCGCAGGGAGGCGATaGTCGTGCCCCGCCACACGT | + |
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Preference number: 4 (lower is better) Translates to: RMLSAGRGSRDVRLGERLGAGRR*SCPATR Trigger: ACGTGTGGCGGGGCACGAGCATCGCCTCCCTGCGCC...CAGTCTTTCCCCGAGCCTCACGTCCCTGCTCCCGCGCCCGGCAGAAAGCATCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GGGCGCGGGAGCAGGGACGTGAGGCTCGGGGAAAGACTGAGCCCAAAGGGAGGCCGACCGGGTCCGAGTTaGGTGCCAGGTCCCCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: GRGSRDVRLGERLSPKGGRPGPS*VPGPLD Trigger: ATCCAGGGGACCTGGCACCCAACTCGGACCCGGTCG...GCCTCCCTTTGGGCTCAGTCTTTCCCCGAGCCTCACGTCCCTGCTCCCGCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GGCGGGAAGGATGCTTTCTGCCGGGCGCGGGAGCAGGGACGTGAGGCTCGGGGATGTTGGACAAGCCCATaGAGTTGGGCGGTGGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: GGKDAFCRAREQGREARGCWTSP*SWAVAR Trigger: CCGGGCCACCGCCCAACTCCATGGGCTTGTCCAACA...TCCCCGAGCCTCACGTCCCTGCTCCCGCGCCCGGCAGAAAGCATCCTTCCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | TCTGTACAAAGTTGCAGGGTTGTAGATGTCCGCCTGCACCCACCGGTGGCCGGCGGCGGCAGCGGCAGCTaGGACACGCCAGGCATGGCG | + |
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Preference number: 4 (lower is better) Translates to: SVQSCRVVDVRLHPPVAGGGSGS*DTPGMA Trigger: CGCCATGCCTGGCGTGTCCCAGCTGCCGCTGCCGCC...GCCGGCCACCGGTGGGTGCAGGCGGACATCTACAACCCTGCAACTTTGTACAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | AGGATGCTTTCTGCCGGGCGCGGGAGCAGGGACGTGAGGCTCGGGGAAAGACTGCTTTCATACCTAGCCTaGCGTCCAGGAGGTCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: RMLSAGRGSRDVRLGERLLSYLA*RPGGRR Trigger: ACGCCGACCTCCTGGACGCCAGGCTAGGTATGAAAG...CAGTCTTTCCCCGAGCCTCACGTCCCTGCTCCCGCGCCCGGCAGAAAGCATCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | TCTGTACAAAGTTGCAGGGTTGTAGATGTCCGCCTGCACCCACCGGTGGCCGGCCCCCGGCTGCTTGTCTaGGTCTTTGGCGCTCACCGC | + |
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Preference number: 4 (lower is better) Translates to: SVQSCRVVDVRLHPPVAGPRLLV*VFGAHR Trigger: GCGGTGAGCGCCAAAGACCCAGACAAGCAGCCGGGG...GCCGGCCACCGGTGGGTGCAGGCGGACATCTACAACCCTGCAACTTTGTACAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GGTTGCATGGACAGTGACTGGATAGACAGGGTAGGGTGGTGGTCCGGGAAAGAAGTTGGCCGGCTTGGCTaGGGTTGGGGCCGCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GCMDSDWIDRVGWWSGKEVGRLG*GWGRPG Trigger: CCCAGGGCGGCCCCAACCCCAGCCAAGCCGGCCAAC...TTCTTTCCCGGACCACCACCCTACCCTGTCTATCCAGTCACTGTCCATGCAACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR GCA 90 bp | CGTGAGCTATGGTGCGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCCCGGCCGCCAGGCTaGACTGGGACAGCGACTGCG | + |
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Preference number: 4 (lower is better) Translates to: RELWCECVCVCVCVCVCVARPPG*TGTATA Trigger: CGCAGTCGCTGTCCCAGTGCAGCCTGGCGGCCGGGC...CACACACACACACACACACACACACACACACACACACTCGCACCATAGCTCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GGTTGCATGGACAGTGACTGGATAGACAGGGTAGGGTGGTGGTCCGGGAAAGAAACAGCGACTGCGCCATaGCCTGCTGGCGGCCGAGCG | + |
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Preference number: 4 (lower is better) Translates to: GCMDSDWIDRVGWWSGKETATAP*PAGGRA Trigger: CGCTCGGCCGCCAGCAGGCCATGGCGCAGTCGCTGT...TTCTTTCCCGGACCACCACCCTACCCTGTCTATCCAGTCACTGTCCATGCAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR GCA 90 bp | GAAGGACGCGATAGGACGACCACAAAACAACCAAGGGCACAGAGCAGCGAGAAGCACTGGGACAGCGACTaGGCCATGGCCTGCTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: EGRDRTTTKQPRAQSSEKHWDSD*AMACWR Trigger: CCGCCAGCAGGCCATGGCGCAGTCGCTGTCCCAGTG...CTTCTCGCTGCTCTGTGCCCTTGGTTGTTTTGTGGTCGTCCTATCGCGTCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR GCA 90 bp | GAAGGACGCGATAGGACGACCACAAAACAACCAAGGGCACAGAGCAGCGAGAAGTGCTGTCCGGAGAGCTaGAGAGCTGGGGCGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: EGRDRTTTKQPRAQSSEKCCPES*RAGASR Trigger: CCGGCTCGCCCCAGCTCTGCAGCTCTCCGGACAGCA...CTTCTCGCTGCTCTGTGCCCTTGGTTGTTTTGTGGTCGTCCTATCGCGTCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GGTTGCATGGACAGTGACTGGATAGACAGGGTAGGGTGGTGGTCCGGGAAAGAAGGGCAGCAGCGTGCCTaGCGCGCGGAACACGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: GCMDSDWIDRVGWWSGKEGQQRA*RAEHVG Trigger: ACCAACGTGTTCCGCGCGCCAGGCACGCTGCTGCCC...TTCTTTCCCGGACCACCACCCTACCCTGTCTATCCAGTCACTGTCCATGCAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | CGCGATAGGACGACCACAAAACAACCAAGGGCACAGAGCAGCGAGAAGAGAAGACATGGAGTTGGGCGGTaGCCCGGCCGCCAGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: RDRTTTKQPRAQSSEKRRHGVGR*PGRQAA Trigger: TGCAGCCTGGCGGCCGGGCCACCGCCCAACTCCATG...TCTTCTCTTCTCGCTGCTCTGTGCCCTTGGTTGTTTTGTGGTCGTCCTATCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR GCA 90 bp | CGCGATAGGACGACCACAAAACAACCAAGGGCACAGAGCAGCGAGAAGAGAAGATGTGCTCGAGCGCCTTaGGGCGCAGGGAGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RDRTTTKQPRAQSSEKRRCARAP*GAGRRC Trigger: GCATCGCCTCCCTGCGCCGCAAGGCGCTCGAGCACA...TCTTCTCTTCTCGCTGCTCTGTGCCCTTGGTTGTTTTGTGGTCGTCCTATCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GGTTGCATGGACAGTGACTGGATAGACAGGGTAGGGTGGTGGTCCGGGAAAGAAGGGTGCCAGGTCCCCTaGATGACCCCCAGGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GCMDSDWIDRVGWWSGKEGCQVP*MTPRVR Trigger: TCTGACCCTGGGGGTCATCCAGGGGACCTGGCACCC...TTCTTTCCCGGACCACCACCCTACCCTGTCTATCCAGTCACTGTCCATGCAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR GCA 90 bp | CGTGAGCTATGGTGCGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCCGCCACACGTCGCTaGTGTCCGGAGAGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RELWCECVCVCVCVCVCVPATRR*CPESCR Trigger: TCTGCAGCTCTCCGGACAGCAGCGACGTGTGGCGGG...CACACACACACACACACACACACACACACACACACACTCGCACCATAGCTCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GCGCTTCTGTTCTCTGGGTTTGGATTTGACCAGCACATGCAGAAAGAGCTGATTCGCCCGGCAGCAGAGTaGCTCCTTCGACCGGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ALLFSGFGFDQHMQKELIRPAAE*LLRPGP Trigger: CGGACCCGGTCGAAGGAGCCACTCTGCTGCCGGGCG...AATCAGCTCTTTCTGCATGTGCTGGTCAAATCCAAACCCAGAGAACAGAAGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GAAGGACGCGATAGGACGACCACAAAACAACCAAGGGCACAGAGCAGCGAGAAGAGCCCGCCAGGCTGTTaGACAAGCCCATGGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGRDRTTTKQPRAQSSEKSPPGC*TSPWSW Trigger: CCAACTCCATGGGCTTGTCCAACAGCCTGGCGGGCT...CTTCTCGCTGCTCTGTGCCCTTGGTTGTTTTGTGGTCGTCCTATCGCGTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR TCA 90 bp | CCTATCAAAATGGGAAAGACCACCTCTTCATCACATAAGTGCCTAAGTCCGCTCGCCAGGTCCCCTGGATaGCCCCCAGGGTCAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PIKMGKTTSSSHKCLSPLARSPG*PPGSEP Trigger: GGGCTCTGACCCTGGGGGTCATCCAGGGGACCTGGC...GAGCGGACTTAGGCACTTATGTGATGAAGAGGTGGTCTTTCCCATTTTGATAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR GCA 90 bp | GGTTGCATGGACAGTGACTGGATAGACAGGGTAGGGTGGTGGTCCGGGAAAGAATGTTTCTGTTGGCCCTaGTGTTGGCCGGCTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCMDSDWIDRVGWWSGKECFCWP*CWPAWL Trigger: CAGCCAAGCCGGCCAACAGCAGGGCCAACAGAAACA...TTCTTTCCCGGACCACCACCCTACCCTGTCTATCCAGTCACTGTCCATGCAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GAAGGACGCGATAGGACGACCACAAAACAACCAAGGGCACAGAGCAGCGAGAAGCGCTTCTGTTTCTGTTaGCCCTGCTGTTGGCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGRDRTTTKQPRAQSSEKRFCFC*PCCWPA Trigger: AGCCGGCCAACAGCAGGGCCAACAGAAACAGAAGCG...CTTCTCGCTGCTCTGTGCCCTTGGTTGTTTTGTGGTCGTCCTATCGCGTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GAAGGACGCGATAGGACGACCACAAAACAACCAAGGGCACAGAGCAGCGAGAAGGCGCGCGGAACACGTTaGTGGTCTTCTTGCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGRDRTTTKQPRAQSSEKARGTR*WSSCAS Trigger: AGAAGCGCAAGAAGACCACCAACGTGTTCCGCGCGC...CTTCTCGCTGCTCTGTGCCCTTGGTTGTTTTGTGGTCGTCCTATCGCGTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR GCA 90 bp | GAAAAAGGAAGCAAACGAACGCCAGTCTTGAAGGATCTAGAAAAGAGATGTGGCGGGAGGCGATGCTCGTaGCCCGCCACACGTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKGSKRTPVLKDLEKRCGGRRCS*PATRRC Trigger: GCAGCGACGTGTGGCGGGGCACGAGCATCGCCTCCC...GCCACATCTCTTTTCTAGATCCTTCAAGACTGGCGTTCGTTTGCTTCCTTTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
||
| CDS-3UTR GCA 90 bp | CGTGAGCTATGGTGCGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAATTCGTTGAGCTGTaGTGGGGTGAAGCGTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RELWCECVCVCVCVCVCVQFVEL*WGEACP Trigger: CGGACACGCTTCACCCCAGCACAGCTCAACGAATTG...CACACACACACACACACACACACACACACACACACACTCGCACCATAGCTCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GCGCTTCTGTTCTCTGGGTTTGGATTTGACCAGCACATGCAGAAAGAGCTGATTCCCAGCGGGTGTCGTTaGCGTGGAAAGAGCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALLFSGFGFDQHMQKELIPSGCR*RGKSTG Trigger: GCCTGTGCTCTTTCCACGCCAACGACACCCGCTGGG...AATCAGCTCTTTCTGCATGTGCTGGTCAAATCCAAACCCAGAGAACAGAAGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GAAAAAGGAAGCAAACGAACGCCAGTCTTGAAGGATCTAGAAAAGAGATGTGGCGCCGCCAGGCTGCACTaGGACAGCGACTGCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EKGSKRTPVLKDLEKRCGAARLH*DSDCAM Trigger: CATGGCGCAGTCGCTGTCCCAGTGCAGCCTGGCGGC...GCCACATCTCTTTTCTAGATCCTTCAAGACTGGCGTTCGTTTGCTTCCTTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
||
| CDS-3UTR CCA 90 bp | CCTATCAAAATGGGAAAGACCACCTCTTCATCACATAAGTGCCTAAGTCCGCTCGGAGAGCTGCAGAGCTaGGGCGAGCCGGAGACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PIKMGKTTSSSHKCLSPLGELQS*GEPETL Trigger: CAACGTCTCCGGCTCGCCCCAGCTCTGCAGCTCTCC...GAGCGGACTTAGGCACTTATGTGATGAAGAGGTGGTCTTTCCCATTTTGATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | CCTATCAAAATGGGAAAGACCACCTCTTCATCACATAAGTGCCTAAGTCCGCTCTGTTGGCCCTGCTGTTaGCCGGCTTGGCTGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PIKMGKTTSSSHKCLSPLCWPCC*PAWLGL Trigger: CAACCCCAGCCAAGCCGGCCAACAGCAGGGCCAACA...GAGCGGACTTAGGCACTTATGTGATGAAGAGGTGGTCTTTCCCATTTTGATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GCGCTTCTGTTCTCTGGGTTTGGATTTGACCAGCACATGCAGAAAGAGCTGATTCGGGTGTCGTTGGCGTaGAAAGAGCACAGGCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ALLFSGFGFDQHMQKELIRVSLA*KEHRLS Trigger: CGACAGCCTGTGCTCTTTCCACGCCAACGACACCCG...AATCAGCTCTTTCTGCATGTGCTGGTCAAATCCAAACCCAGAGAACAGAAGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR GCA 90 bp | GAAAAAGGAAGCAAACGAACGCCAGTCTTGAAGGATCTAGAAAAGAGATGTGGCCTCATGGAGACTGTGTaGTCGAGCGCCTTGCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EKGSKRTPVLKDLEKRCGLMETV*SSALRR Trigger: GCGCCGCAAGGCGCTCGAGCACACAGTCTCCATGAG...GCCACATCTCTTTTCTAGATCCTTCAAGACTGGCGTTCGTTTGCTTCCTTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GCGCTTCTGTTCTCTGGGTTTGGATTTGACCAGCACATGCAGAAAGAGCTGATTTTCGTTGAGCTGTGCTaGGGTGAAGCGTGTCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLFSGFGFDQHMQKELIFVELC*GEACPV Trigger: CACCGGACACGCTTCACCCCAGCACAGCTCAACGAA...AATCAGCTCTTTCTGCATGTGCTGGTCAAATCCAAACCCAGAGAACAGAAGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CCA 90 bp | GCGGTTGGTAGCAATGCTTGTCCACCTTTAAGACAAAAATCCCTAGCATTGTGCCGCGGAACACGTTGGTaGTCTTCTTGCGCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AVGSNACPPLRQKSLALCRGTRW*SSCASS Trigger: GGAAGAAGCGCAAGAAGACCACCAACGTGTTCCGCG...GCACAATGCTAGGGATTTTTGTCTTAAAGGTGGACAAGCATTGCTACCAACCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR GCA 90 bp | GAAAAAGGAAGCAAACGAACGCCAGTCTTGAAGGATCTAGAAAAGAGATGTGGCCGTTGGTGGTCTTCTTaGGCTTCTTCCACTTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EKGSKRTPVLKDLEKRCGRWWSS*ASSTWR Trigger: GCGCCAAGTGGAAGAAGCGCAAGAAGACCACCAACG...GCCACATCTCTTTTCTAGATCCTTCAAGACTGGCGTTCGTTTGCTTCCTTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| 3UTR CAA 72 bp | CCTTTAAGACAAAAATCCCTAGCATTGTGCTGTACCTaGAACACGTCCATGTGTGACCAAGATGCACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLRQKSLALCCT*NTSMCDQDALC Trigger: ACACAGTGCATCTTGGTCACACATGGACGTGTTCAAGGTACAGCACAATGCTAGGGATTTTTGTCTTAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
||
| CDS GCA 90 bp | GGCCCGGCCGCCAGGCTGCACTGGGACAGCGACTGCGCCATGGCCTaGTGGCGGCCGAGCGCGGGCGGCAGCGGCAGCTGGGACACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPAARLHWDSDCAMA*WRPSAGGSGSWDTP Trigger: TGGCGTGTCCCAGCTGCCGCTGCCGCCCGCGCTCGGCCGCCAGCAGGCCATGGCGCAGTCGCTGTCCCAGTGCAGCCTGGCGGCCGGGCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 90 bp | TGCGCCATGGCCTGCTGGCGGCCGAGCGCGGGCGGCAGCGGCAGCTaGGACACGCCAGGCATGGCGGCCGCCGCCCAGCGGGTGTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CAMACWRPSAGGSGS*DTPGMAAAAQRVSL Trigger: CAACGACACCCGCTGGGCGGCGGCCGCCATGCCTGGCGTGTCCCAGCTGCCGCTGCCGCCCGCGCTCGGCCGCCAGCAGGCCATGGCGCA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 90 bp | GCGGTGGCCCGGCCGCCAGGCTGCACTGGGACAGCGACTGCGCCATaGCCTGCTGGCGGCCGAGCGCGGGCGGCAGCGGCAGCTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: AVARPPGCTGTATAP*PAGGRARAAAAAGT Trigger: TGTCCCAGCTGCCGCTGCCGCCCGCGCTCGGCCGCCAGCAGGCCATGGCGCAGTCGCTGTCCCAGTGCAGCCTGGCGGCCGGGCCACCGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 90 bp | GGCGGCCGAGCGCGGGCGGCAGCGGCAGCTGGGACACGCCAGGCATaGCGGCCGCCGCCCAGCGGGTGTCGTTGGCGTGGAAAGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: GGRARAAAAAGTRQA*RPPPSGCRWRGKST Trigger: TGTGCTCTTTCCACGCCAACGACACCCGCTGGGCGGCGGCCGCCATGCCTGGCGTGTCCCAGCTGCCGCTGCCGCCCGCGCTCGGCCGCC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 90 bp | GCTGGGACACGCCAGGCATGGCGGCCGCCGCCCAGCGGGTGTCGTTaGCGTGGAAAGAGCACAGGCTGTCGCCCATGGCGGCGGCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGTRQAWRPPPSGCR*RGKSTGCRPWRRPR Trigger: CCGCGGCCGCCGCCATGGGCGACAGCCTGTGCTCTTTCCACGCCAACGACACCCGCTGGGCGGCGGCCGCCATGCCTGGCGTGTCCCAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CAA 90 bp | GGCGGGAAGGATGCTTTCTGCCGGGCGCGGGAGCAGGGACGTGAGGCTCGGGGAGGCGAGCCGGAGACGTaGCTGGGGCCGGGGAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGKDAFCRAREQGREARGGEPET*LGPGRE Trigger: CTCCCTCCCCGGCCCCAGCAACGTCTCCGGCTCGCC...TCCCCGAGCCTCACGTCCCTGCTCCCGCGCCCGGCAGAAAGCATCCTTCCCGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 90 bp | CCGCGCCGTTGGAGCCCGCCAGGCTGTTGGACAAGCCCATGGAGTTaGGCGGTGGCCCGGCCGCCAGGCTGCACTGGGACAGCGACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PRRWSPPGCWTSPWS*AVARPPGCTGTATA Trigger: CGCAGTCGCTGTCCCAGTGCAGCCTGGCGGCCGGGCCACCGCCCAACTCCATGGGCTTGTCCAACAGCCTGGCGGGCTCCAACGGCGCGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 90 bp | AGAGGTGCGACTGCAGCCCCGCGCCGTTGGAGCCCGCCAGGCTGTTaGACAAGCCCATGGAGTTGGGCGGTGGCCCGGCCGCCAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGATAAPRRWSPPGC*TSPWSWAVARPPGC Trigger: GCAGCCTGGCGGCCGGGCCACCGCCCAACTCCATGGGCTTGTCCAACAGCCTGGCGGGCTCCAACGGCGCGGGGCTGCAGTCGCACCTCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS GCA 90 bp | CCTTGCGGCGCAGGGAGGCGATGCTCGTGCCCCGCCACACGTCGCTaGTGTCCGGAGAGCTGCAGAGCTGGGGCGAGCCGGAGACGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PCGAGRRCSCPATRR*CPESCRAGASRRRC Trigger: GCAACGTCTCCGGCTCGCCCCAGCTCTGCAGCTCTCCGGACAGCAGCGACGTGTGGCGGGGCACGAGCATCGCCTCCCTGCGCCGCAAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 90 bp | GTTGGAGCCCGCCAGGCTGTTGGACAAGCCCATGGAGTTGGGCGGTaGCCCGGCCGCCAGGCTGCACTGGGACAGCGACTGCGCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VGARQAVGQAHGVGR*PGRQAALGQRLRHG Trigger: GCCATGGCGCAGTCGCTGTCCCAGTGCAGCCTGGCGGCCGGGCCACCGCCCAACTCCATGGGCTTGTCCAACAGCCTGGCGGGCTCCAAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 90 bp | CGGGGAAGGCGGGCTGGTAGAGGTGCGACTGCAGCCCCGCGCCGTTaGAGCCCGCCAGGCTGTTGGACAAGCCCATGGAGTTGGGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGRRAGRGATAAPRR*SPPGCWTSPWSWAV Trigger: CACCGCCCAACTCCATGGGCTTGTCCAACAGCCTGGCGGGCTCCAACGGCGCGGGGCTGCAGTCGCACCTCTACCAGCCCGCCTTCCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS GCA 90 bp | AGACTGTGTGCTCGAGCGCCTTGCGGCGCAGGGAGGCGATGCTCGTaGCCCGCCACACGTCGCTGCTGTCCGGAGAGCTGCAGAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLCARAPCGAGRRCS*PATRRCCPESCRAG Trigger: CCCAGCTCTGCAGCTCTCCGGACAGCAGCGACGTGTGGCGGGGCACGAGCATCGCCTCCCTGCGCCGCAAGGCGCTCGAGCACACAGTCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS GCA 90 bp | TCATGGAGACTGTGTGCTCGAGCGCCTTGCGGCGCAGGGAGGCGATaGTCGTGCCCCGCCACACGTCGCTGCTGTCCGGAGAGCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SWRLCARAPCGAGRR*SCPATRRCCPESCR Trigger: TCTGCAGCTCTCCGGACAGCAGCGACGTGTGGCGGGGCACGAGCATCGCCTCCCTGCGCCGCAAGGCGCTCGAGCACACAGTCTCCATGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 90 bp | AGCCGACGGGAACTGGGGCAGCCCCGGCGTGGGCAGCAGCGTGCCTaGCGCGCGGAACACGTTGGTGGTCTTCTTGCGCTTCTTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: SRRELGQPRRGQQRA*RAEHVGGLLALLPL Trigger: AAGTGGAAGAAGCGCAAGAAGACCACCAACGTGTTCCGCGCGCCAGGCACGCTGCTGCCCACGCCGGGGCTGCCCCAGTTCCCGTCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CAA 90 bp | AGGATGCTTTCTGCCGGGCGCGGGAGCAGGGACGTGAGGCTCGGGGAAAGACTGTCGACCGGGTCCGAGTaGGGTGCCAGGTCCCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RMLSAGRGSRDVRLGERLSTGSE*GARSPG Trigger: TCCAGGGGACCTGGCACCCAACTCGGACCCGGTCGA...CAGTCTTTCCCCGAGCCTCACGTCCCTGCTCCCGCGCCCGGCAGAAAGCATCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CAA 90 bp | AGGATGCTTTCTGCCGGGCGCGGGAGCAGGGACGTGAGGCTCGGGGAAAGACTGGCCCAGCGGGTGTCGTaGGCGTGGAAAGAGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RMLSAGRGSRDVRLGERLAQRVS*AWKEHR Trigger: CCTGTGCTCTTTCCACGCCAACGACACCCGCTGGGC...CAGTCTTTCCCCGAGCCTCACGTCCCTGCTCCCGCGCCCGGCAGAAAGCATCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CAA 90 bp | GGCGGGAAGGATGCTTTCTGCCGGGCGCGGGAGCAGGGACGTGAGGCTCGGGGAACGTTGGTGGTCTTCTaGCGCTTCTTCCACTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GGKDAFCRAREQGREARGTLVVF*RFFHLA Trigger: CGCCAAGTGGAAGAAGCGCAAGAAGACCACCAACGT...TCCCCGAGCCTCACGTCCCTGCTCCCGCGCCCGGCAGAAAGCATCCTTCCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CAA 90 bp | GGTTGCATGGACAGTGACTGGATAGACAGGGTAGGGTGGTGGTCCGGGAAAGAATGCAGCCCCGCGCCGTaGGAGCCCGCCAGGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GCMDSDWIDRVGWWSGKECSPAP*EPARLL Trigger: CAACAGCCTGGCGGGCTCCAACGGCGCGGGGCTGCA...TTCTTTCCCGGACCACCACCCTACCCTGTCTATCCAGTCACTGTCCATGCAACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 90 bp | CTCCTCTCCAATTCGTTGAGCTGTGCTGGGGTGAAGCGTGTCCGGTaGCGCTTCTGTTTCTGTTGGCCCTGCTGTTGGCCGGCTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLSNSLSCAGVKRVR*RFCFCWPCCWPAWL Trigger: CAGCCAAGCCGGCCAACAGCAGGGCCAACAGAAACAGAAGCGCCACCGGACACGCTTCACCCCAGCACAGCTCAACGAATTGGAGAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CAA 90 bp | GAAGGACGCGATAGGACGACCACAAAACAACCAAGGGCACAGAGCAGCGAGAAGTGGGGCCCCGGCTGCTaGTCTGGGTCTTTGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EGRDRTTTKQPRAQSSEKWGPGC*SGSLAL Trigger: GAGCGCCAAAGACCCAGACAAGCAGCCGGGGCCCCA...CTTCTCGCTGCTCTGTGCCCTTGGTTGTTTTGTGGTCGTCCTATCGCGTCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
||
| CDS-3UTR CAA 90 bp | CGCGATAGGACGACCACAAAACAACCAAGGGCACAGAGCAGCGAGAAGAGAAGAGTGTGCTCGAGCGCCTaGCGGCGCAGGGAGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: RDRTTTKQPRAQSSEKRRVCSSA*RRREAM Trigger: CATCGCCTCCCTGCGCCGCAAGGCGCTCGAGCACAC...TCTTCTCTTCTCGCTGCTCTGTGCCCTTGGTTGTTTTGTGGTCGTCCTATCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS-3UTR CAA 90 bp | GAAAAAGGAAGCAAACGAACGCCAGTCTTGAAGGATCTAGAAAAGAGATGTGGCGACAAGCCCATGGAGTaGGGCGGTGGCCCGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: EKGSKRTPVLKDLEKRCGDKPME*GGGPAA Trigger: GGCGGCCGGGCCACCGCCCAACTCCATGGGCTTGTC...GCCACATCTCTTTTCTAGATCCTTCAAGACTGGCGTTCGTTTGCTTCCTTTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
||
| CDS-3UTR CAA 90 bp | GGTTGCATGGACAGTGACTGGATAGACAGGGTAGGGTGGTGGTCCGGGAAAGAACTCCTCTCCAATTCGTaGAGCTGTGCTGGGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GCMDSDWIDRVGWWSGKELLSNS*SCAGVK Trigger: CTTCACCCCAGCACAGCTCAACGAATTGGAGAGGAG...TTCTTTCCCGGACCACCACCCTACCCTGTCTATCCAGTCACTGTCCATGCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
||
| CDS-3UTR CAA 90 bp | GCGGTTGGTAGCAATGCTTGTCCACCTTTAAGACAAAAATCCCTAGCATTGTGCCTGTTGGCCCTGCTGTaGGCCGGCTTGGCTGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AVGSNACPPLRQKSLALCLLALL*AGLAGV Trigger: AACCCCAGCCAAGCCGGCCAACAGCAGGGCCAACAG...GCACAATGCTAGGGATTTTTGTCTTAAAGGTGGACAAGCATTGCTACCAACCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
||
| CDS-3UTR CAA 90 bp | CCTATCAAAATGGGAAAGACCACCTCTTCATCACATAAGTGCCTAAGTCCGCTCGAGCCCGCCAGGCTGTaGGACAAGCCCATGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PIKMGKTTSSSHKCLSPLEPARL*DKPMEL Trigger: CAACTCCATGGGCTTGTCCAACAGCCTGGCGGGCTC...GAGCGGACTTAGGCACTTATGTGATGAAGAGGTGGTCTTTCCCATTTTGATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
||
| CDS-3UTR CAA 90 bp | GAAAAAGGAAGCAAACGAACGCCAGTCTTGAAGGATCTAGAAAAGAGATGTGGCTGCTTGTCTGGGTCTTaGGCGCTCACCGCCAGCGAA | + |
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Preference number: 5 (lower is better) Translates to: EKGSKRTPVLKDLEKRCGCLSGS*ALTASE Trigger: TTCGCTGGCGGTGAGCGCCAAAGACCCAGACAAGCA...GCCACATCTCTTTTCTAGATCCTTCAAGACTGGCGTTCGTTTGCTTCCTTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 72 bp | GCGCGGGCGGCAGCGGCAGCTGGGACACGCCAGGCATaGCGGCCGCCGCCCAGCGGGTGTCGTTGGCGTGGA | + |
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Preference number: 6 (lower is better) Translates to: ARAAAAAGTRQA*RPPPSGCRWRG Trigger: TCCACGCCAACGACACCCGCTGGGCGGCGGCCGCCATGCCTGGCGTGTCCCAGCTGCCGCTGCCGCCCGCGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS GCA 72 bp | GCCAGGCTGCACTGGGACAGCGACTGCGCCATGGCCTaGTGGCGGCCGAGCGCGGGCGGCAGCGGCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ARLHWDSDCAMA*WRPSAGGSGSW Trigger: CCAGCTGCCGCTGCCGCCCGCGCTCGGCCGCCAGCAGGCCATGGCGCAGTCGCTGTCCCAGTGCAGCCTGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CAA 90 bp | AGCTGGGACACGCCAGGCATGGCGGCCGCCGCCCAGCGGGTGTCGTaGGCGTGGAAAGAGCACAGGCTGTCGCCCATGGCGGCGGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: SWDTPGMAAAAQRVS*AWKEHRLSPMAAAA Trigger: CGCGGCCGCCGCCATGGGCGACAGCCTGTGCTCTTTCCACGCCAACGACACCCGCTGGGCGGCGGCCGCCATGCCTGGCGTGTCCCAGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS GCA 72 bp | GCTCGAGCGCCTTGCGGCGCAGGGAGGCGATGCTCGTaGCCCGCCACACGTCGCTGCTGTCCGGAGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ARAPCGAGRRCS*PATRRCCPESC Trigger: GCAGCTCTCCGGACAGCAGCGACGTGTGGCGGGGCACGAGCATCGCCTCCCTGCGCCGCAAGGCGCTCGAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 72 bp | CGCCAGGCATGGCGGCCGCCGCCCAGCGGGTGTCGTTaGCGTGGAAAGAGCACAGGCTGTCGCCCATGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RQAWRPPPSGCR*RGKSTGCRPWR Trigger: CCGCCATGGGCGACAGCCTGTGCTCTTTCCACGCCAACGACACCCGCTGGGCGGCGGCCGCCATGCCTGGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 72 bp | ACTGCAGCCCCGCGCCGTTGGAGCCCGCCAGGCTGTTaGACAAGCCCATGGAGTTGGGCGGTGGCCCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: TAAPRRWSPPGC*TSPWSWAVARP Trigger: CGGCCGGGCCACCGCCCAACTCCATGGGCTTGTCCAACAGCCTGGCGGGCTCCAACGGCGCGGGGCTGCAGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CAA 90 bp | CCCGCGCCGTTGGAGCCCGCCAGGCTGTTGGACAAGCCCATGGAGTaGGGCGGTGGCCCGGCCGCCAGGCTGCACTGGGACAGCGACTGC | + |
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Preference number: 6 (lower is better) Translates to: PAPLEPARLLDKPME*GGGPAARLHWDSDC Trigger: GCAGTCGCTGTCCCAGTGCAGCCTGGCGGCCGGGCCACCGCCCAACTCCATGGGCTTGTCCAACAGCCTGGCGGGCTCCAACGGCGCGGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS GCA 72 bp | CTGTGTGCTCGAGCGCCTTGCGGCGCAGGGAGGCGATaGTCGTGCCCCGCCACACGTCGCTGCTGTCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: LCARAPCGAGRR*SCPATRRCCPE Trigger: CTCCGGACAGCAGCGACGTGTGGCGGGGCACGAGCATCGCCTCCCTGCGCCGCAAGGCGCTCGAGCACACAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CAA 72 bp | ACGCCAGGCATGGCGGCCGCCGCCCAGCGGGTGTCGTaGGCGTGGAAAGAGCACAGGCTGTCGCCCATGGCG | + |
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Preference number: 6 (lower is better) Translates to: TPGMAAAAQRVS*AWKEHRLSPMA Trigger: CGCCATGGGCGACAGCCTGTGCTCTTTCCACGCCAACGACACCCGCTGGGCGGCGGCCGCCATGCCTGGCGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 72 bp | CGCCAGGCTGTTGGACAAGCCCATGGAGTTGGGCGGTaGCCCGGCCGCCAGGCTGCACTGGGACAGCGACTG | + |
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Preference number: 6 (lower is better) Translates to: RQAVGQAHGVGR*PGRQAALGQRL Trigger: CAGTCGCTGTCCCAGTGCAGCCTGGCGGCCGGGCCACCGCCCAACTCCATGGGCTTGTCCAACAGCCTGGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 72 bp | CCGGCAGCAGAGTGGCTCCTTCGACCGGGTCCGAGTTaGGTGCCAGGTCCCCTGGATGACCCCCAGGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PAAEWLLRPGPS*VPGPLDDPQGQ Trigger: CTGACCCTGGGGGTCATCCAGGGGACCTGGCACCCAACTCGGACCCGGTCGAAGGAGCCACTCTGCTGCCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 72 bp | GAACTGGGGCAGCCCCGGCGTGGGCAGCAGCGTGCCTaGCGCGCGGAACACGTTGGTGGTCTTCTTGCGCTT | + |
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Preference number: 6 (lower is better) Translates to: ELGQPRRGQQRA*RAEHVGGLLAL Trigger: AAGCGCAAGAAGACCACCAACGTGTTCCGCGCGCCAGGCACGCTGCTGCCCACGCCGGGGCTGCCCCAGTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 72 bp | CGGGCTGGTAGAGGTGCGACTGCAGCCCCGCGCCGTTaGAGCCCGCCAGGCTGTTGGACAAGCCCATGGAGT | + |
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Preference number: 6 (lower is better) Translates to: RAGRGATAAPRR*SPPGCWTSPWS Trigger: ACTCCATGGGCTTGTCCAACAGCCTGGCGGGCTCCAACGGCGCGGGGCTGCAGTCGCACCTCTACCAGCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS GCA 72 bp | CAGCAGAGTGGCTCCTTCGACCGGGTCCGAGTTGGGTaGCAGGTCCCCTGGATGACCCCCAGGGTCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: QQSGSFDRVRVG*QVPWMTPRVRA Trigger: GGCTCTGACCCTGGGGGTCATCCAGGGGACCTGGCACCCAACTCGGACCCGGTCGAAGGAGCCACTCTGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS GCA 72 bp | AAGCGTGTCCGGTGGCGCTTCTGTTTCTGTTGGCCCTaGTGTTGGCCGGCTTGGCTGGGGTTGGGGCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: KRVRWRFCFCWP*CWPAWLGLGPP Trigger: GGGCGGCCCCAACCCCAGCCAAGCCGGCCAACAGCAGGGCCAACAGAAACAGAAGCGCCACCGGACACGCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 72 bp | GCGTGGGCAGCAGCGTGCCTGGCGCGCGGAACACGTTaGTGGTCTTCTTGCGCTTCTTCCACTTGGCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: AWAAACLARGTR*WSSCASSTWRG Trigger: GCCGCGCCAAGTGGAAGAAGCGCAAGAAGACCACCAACGTGTTCCGCGCGCCAGGCACGCTGCTGCCCACGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CAA 72 bp | GGCGTGGGCAGCAGCGTGCCTGGCGCGCGGAACACGTaGGTGGTCTTCTTGCGCTTCTTCCACTTGGCGCGG | + |
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Preference number: 6 (lower is better) Translates to: GVGSSVPGARNT*VVFLRFFHLAR Trigger: CCGCGCCAAGTGGAAGAAGCGCAAGAAGACCACCAACGTGTTCCGCGCGCCAGGCACGCTGCTGCCCACGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 72 bp | TGGGCAGCAGCGTGCCTGGCGCGCGGAACACGTTGGTaGTCTTCTTGCGCTTCTTCCACTTGGCGCGGCGAT | + |
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Preference number: 6 (lower is better) Translates to: WAAACLARGTRW*SSCASSTWRGD Trigger: ATCGCCGCGCCAAGTGGAAGAAGCGCAAGAAGACCACCAACGTGTTCCGCGCGCCAGGCACGCTGCTGCCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS CCA 72 bp | AATTCGTTGAGCTGTGCTGGGGTGAAGCGTGTCCGGTaGCGCTTCTGTTTCTGTTGGCCCTGCTGTTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: NSLSCAGVKRVR*RFCFCWPCCWP Trigger: CGGCCAACAGCAGGGCCAACAGAAACAGAAGCGCCACCGGACACGCTTCACCCCAGCACAGCTCAACGAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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| CDS GCA 72 bp | AGTCTTGGCGAAGCTCCTCTCCAATTCGTTGAGCTGTaGTGGGGTGAAGCGTGTCCGGTGGCGCTTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: SLGEAPLQFVEL*WGEACPVALLF Trigger: AAACAGAAGCGCCACCGGACACGCTTCACCCCAGCACAGCTCAACGAATTGGAGAGGAGCTTCGCCAAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022195.13 |
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