Pregenerated sensors for OTOP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018862Ensembl transcript IDs: ENSMUST00000019006.5, ENSMUST00000106543.8
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGTTGGGCCCTGCCTGGCAGCTAATGAATGAGCTCATTAGGAGATaGGCGTGTGGGGAGATGGGCAGGGCTGCCTGCCAAGCTTGGAGT | + |
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Preference number: 1 (lower is better) Translates to: LLGPAWQLMNELIRR*ACGEMGRAACQAWS Trigger: ACTCCAAGCTTGGCAGGCAGCCCTGCCCATCTCCCCACACGCCCATCTCCTAATGAGCTCATTCATTAGCTGCCAGGCAGGGCCCAACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR TCA 90 bp | GGGGAGATGGGCAGGGCTGCCTGCCAAGCTTGGAGTGCTGGGGTTTaGGCTCTCAGTTGGAGTTCTGAGCTTCTAGGATGTCCCACAGAA | + |
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Preference number: 1 (lower is better) Translates to: GEMGRAACQAWSAGV*ALSWSSELLGCPTE Trigger: TTCTGTGGGACATCCTAGAAGCTCAGAACTCCAACTGAGAGCTCAAACCCCAGCACTCCAAGCTTGGCAGGCAGCCCTGCCCATCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR CCA 90 bp | CATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTaGCCTGTTGTCAAGAGGCTCAGTTTCCAAGCCCCACCCTTGGTT | + |
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Preference number: 1 (lower is better) Translates to: HTDPHSLWQPPGVHP*PVVKRLSFQAPPLV Trigger: AACCAAGGGTGGGGCTTGGAAACTGAGCCTCTTGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR TCA 90 bp | GGCCTGTTGTCAAGAGGCTCAGTTTCCAAGCCCCACCCTTGGTTTTaGGCTCCAGGCAGTATCCTCTCCTCCTCAGTCAGGTTGAGGATA | + |
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Preference number: 1 (lower is better) Translates to: GLLSRGSVSKPHPWF*APGSILSSSVRLRI Trigger: TATCCTCAACCTGACTGAGGAGGAGAGGATACTGCCTGGAGCTCAAAACCAAGGGTGGGGCTTGGAAACTGAGCCTCTTGACAACAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR CCA 90 bp | ACAAACAGGGTTTATGGAAGCCGGAAAGAGTTGTTGGGCCCTGCCTaGCAGCTAATGAATGAGCTCATTAGGAGATGGGCGTGTGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: TNRVYGSRKELLGPA*QLMNELIRRWACGE Trigger: CTCCCCACACGCCCATCTCCTAATGAGCTCATTCATTAGCTGCCAGGCAGGGCCCAACAACTCTTTCCGGCTTCCATAAACCCTGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGGGCTGCCTGCCAAGCTTGGAGTGCTGGGGTTTGAGCTCTCAGTTGGAGCCCGGGGTACATCCTTaGCCTGTTGTCAAGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: GQGCLPSLECWGLSSQLEPGVHP*PVVKRL Trigger: GAGCCTCTTGACAACAGGCCAAGGATGTACCCCGGG...CTCCAACTGAGAGCTCAAACCCCAGCACTCCAAGCTTGGCAGGCAGCCCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR-3UTR TCA 90 bp | CTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCACCCCACCCTTGGTTTTaGGCTCCAGGCAGTATCCTC | + |
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Preference number: 2 (lower is better) Translates to: LTLTAFGSHPGYILGLLSPHPWF*APGSIL Trigger: GAGGATACTGCCTGGAGCTCAAAACCAAGGGTGGGG...TGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCAAGAGGAGGATAGGTCACTTTaGGAACCCCAGGCAGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: PSQPLAATRGTSLACCQEEDRSL*EPQAGF Trigger: GAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTC...CTCTTGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGGGCTGCCTGCCAAGCTTGGAGTGCTGGGGTTTGAGCTCTCAGTTGGAGCCGAGTTTCTTTTTCTaGCTTGGCACTTTCGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: GQGCLPSLECWGLSSQLEPSFFF*LGTFGV Trigger: AACCCCGAAAGTGCCAAGGCAGAAAAAGAAACTCGG...CTCCAACTGAGAGCTCAAACCCCAGCACTCCAAGCTTGGCAGGCAGCCCTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR-3UTR CCA 90 bp | CACAATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGAGGATAGGTCACTTTaGGAACCCCAGGCAGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: HNFILTLTAFGSHPGYILEDRSL*EPQAGF Trigger: GAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTC...AAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTCCGAGTTTCTTTTTCTaGCTTGGCACTTTCGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: SVRLRIGHFGNPRQVSAPPSFFF*LGTFGV Trigger: AACCCCGAAAGTGCCAAGGCAGAAAAAGAAACTCGG...AGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGACTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR-3UTR CAA 90 bp | CTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCATTCCAAGCCCCACCCTaGGTTTTGAGCTCCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: LTLTAFGSHPGYILGLLSFQAPP*VLSSRQ Trigger: CTGCCTGGAGCTCAAAACCAAGGGTGGGGCTTGGAA...TGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR CCA 72 bp | CCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTaGCCTGTTGTCAAGAGGCTCAGTTTCCAAGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: PHSLWQPPGVHP*PVVKRLSFQAP Trigger: TGGGGCTTGGAAACTGAGCCTCTTGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR-3UTR CAA 90 bp | TTGGGCCCTGCCTGGCAGCTAATGAATGAGCTCATTAGGAGATGGGCGTGTGGGTTCCAAGCCCCACCCTaGGTTTTGAGCTCCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: LGPAWQLMNELIRRWACGFQAPP*VLSSRQ Trigger: CTGCCTGGAGCTCAAAACCAAGGGTGGGGCTTGGAA...CCCACACGCCCATCTCCTAATGAGCTCATTCATTAGCTGCCAGGCAGGGCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR TCA 72 bp | AACCTCTTCCAGCCCCCAGACGCCACAATTTCATACTaGCCCTCACAGCCTTTGGCAGCCACCCGGGGTACA | + |
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Preference number: 3 (lower is better) Translates to: NLFQPPDATISY*PSQPLAATRGT Trigger: TGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATTGTGGCGTCTGGGGGCTGGAAGAGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR GCA 72 bp | GACGTGTCTGCCCAGATACTCCCGAGTTTCTTTTTCTaGCTTGGCACTTTCGGGGTTCCGCTGTGGCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: DVSAQILPSFFF*LGTFGVPLWLG Trigger: ACCCAGCCACAGCGGAACCCCGAAAGTGCCAAGGCAGAAAAAGAAACTCGGGAGTATCTGGGCAGACACGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR TCA 72 bp | TCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTCTTaGTGCGACGTGTCTGCCCAGATACTCCCGAGTTTC | + |
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Preference number: 3 (lower is better) Translates to: SLWEPQAGFCTS*CDVSAQILPSF Trigger: GAAACTCGGGAGTATCTGGGCAGACACGTCGCATCAAGAGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR GCA 72 bp | CCAGGCAGGTTTCTGCACCTCTTGATGCGACGTGTCTaGCCAGATACTCCCGAGTTTCTTTTTCTGCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: PGRFLHLLMRRV*PDTPEFLFLPW Trigger: CCAAGGCAGAAAAAGAAACTCGGGAGTATCTGGGCAGACACGTCGCATCAAGAGGTGCAGAAACCTGCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR CCA 72 bp | GTTTATGGAAGCCGGAAAGAGTTGTTGGGCCCTGCCTaGCAGCTAATGAATGAGCTCATTAGGAGATGGGCG | + |
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Preference number: 3 (lower is better) Translates to: VYGSRKELLGPA*QLMNELIRRWA Trigger: CGCCCATCTCCTAATGAGCTCATTCATTAGCTGCCAGGCAGGGCCCAACAACTCTTTCCGGCTTCCATAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR GCA 90 bp | GGGCAGGGCTGCCTGCCAAGCTTGGAGTGCTGGGGTTTGAGCTCTCAGTTGGAGCAGAGGGGGCGGCGGTaGAGGCCCTCGATGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: GQGCLPSLECWGLSSQLEQRGRR*RPSMMK Trigger: CTTCATCATCGAGGGCCTGCACCGCCGCCCCCTCTG...CTCCAACTGAGAGCTCAAACCCCAGCACTCCAAGCTTGGCAGGCAGCCCTGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGGGCTGCCTGCCAAGCTTGGAGTGCTGGGGTTTGAGCTCTCAGTTGGAGAGCCCCTCACCCAGATaGGTCCCGCGTGGGGATCAC | + |
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Preference number: 4 (lower is better) Translates to: GQGCLPSLECWGLSSQLESPSPR*VPRGDH Trigger: GTGATCCCCACGCGGGACCCATCTGGGTGAGGGGCT...CTCCAACTGAGAGCTCAAACCCCAGCACTCCAAGCTTGGCAGGCAGCCCTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR CCA 90 bp | CCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCAAGAGAGCCCCTCACCCAGATaGGTCCCGCGTGGGGATCAC | + |
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Preference number: 4 (lower is better) Translates to: PSQPLAATRGTSLACCQESPSPR*VPRGDH Trigger: GTGATCCCCACGCGGGACCCATCTGGGTGAGGGGCT...CTCTTGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR CCA 90 bp | CCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCAAGAGCGCTCCTCCAGCCCATaGATGGCTGTACCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PSQPLAATRGTSLACCQERSSSP*MAVPAR Trigger: CCTGGCTGGTACAGCCATCCATGGGCTGGAGGAGCG...CTCTTGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR GCA 90 bp | TTGGGCCCTGCCTGGCAGCTAATGAATGAGCTCATTAGGAGATGGGCGTGTGGGAGCCCGGAGAAGAGCTaGCCGGCCTTCTGGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LGPAWQLMNELIRRWACGSPEKS*PAFWAC Trigger: ACAGGCCCAGAAGGCCGGGCAGCTCTTCTCCGGGCT...CCCACACGCCCATCTCCTAATGAGCTCATTCATTAGCTGCCAGGCAGGGCCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR GCA 90 bp | GGGCAGGGCTGCCTGCCAAGCTTGGAGTGCTGGGGTTTGAGCTCTCAGTTGGAGTGGAGAAGTAGGCGATaGCCATCTGGCCCAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GQGCLPSLECWGLSSQLEWRSRR*PSGPVQ Trigger: CTGCACTGGGCCAGATGGGCATCGCCTACTTCTCCA...CTCCAACTGAGAGCTCAAACCCCAGCACTCCAAGCTTGGCAGGCAGCCCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR CCA 90 bp | AATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCGGATGGGCACCTGTGTaGGCTGCCAGGCTGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: NFILTLTAFGSHPGYILGGWAPV*AARLRL Trigger: GAGCCGCAGCCTGGCAGCCCACACAGGTGCCCATCC...GCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGGGCTGCCTGCCAAGCTTGGAGTGCTGGGGTTTGAGCTCTCAGTTGGAGCAAAAGGCCCAGCAGTaGCCCAAAGATGGTCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: GQGCLPSLECWGLSSQLEQKAQQ*PKDGPV Trigger: CACGGGACCATCTTTGGGCCACTGCTGGGCCTTTTG...CTCCAACTGAGAGCTCAAACCCCAGCACTCCAAGCTTGGCAGGCAGCCCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| 3UTR CAA 72 bp | CCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTaGGCCTGTTGTCAAGAGGCTCAGTTTCCAAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: PSQPLAATRGTS*ACCQEAQFPSP Trigger: GGGGCTTGGAAACTGAGCCTCTTGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR CCA 90 bp | TCAGTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTGGATGGGCACCTGTGTaGGCTGCCAGGCTGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SVRLRIGHFGNPRQVSAPGWAPV*AARLRL Trigger: GAGCCGCAGCCTGGCAGCCCACACAGGTGCCCATCC...AGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR CCA 90 bp | CTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCAACGCCAGGCTCATGGTaGGCAGCACAGCCACATAGA | + |
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Preference number: 4 (lower is better) Translates to: LTLTAFGSHPGYILGLLSTPGSW*AAQPHR Trigger: TCTATGTGGCTGTGCTGCCCACCATGAGCCTGGCGT...TGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR TCA 90 bp | CTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCAGTTGGTCCCGTTACCTaGGAGGAGATAGGGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LTLTAFGSHPGYILGLLSVGPVT*EEIGQE Trigger: TTCCTGCCCTATCTCCTCTCAGGTAACGGGACCAAC...TGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019006.5 |
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| CDS-3UTR GCA 90 bp | CACAATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTAGCCCGGAGAAGAGCTaGCCGGCCTTCTGGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: HNFILTLTAFGSHPGYILSPEKS*PAFWAC Trigger: ACAGGCCCAGAAGGCCGGGCAGCTCTTCTCCGGGCT...AAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR GCA 90 bp | CACAATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTCAGAGGGGGCGGCGGTaGAGGCCCTCGATGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: HNFILTLTAFGSHPGYILQRGRR*RPSMMK Trigger: CTTCATCATCGAGGGCCTGCACCGCCGCCCCCTCTG...AAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR TCA 90 bp | CCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCAAGAGGGCAGTACTCAGTGCTaGAGGGGTAGAGCATCAGAT | + |
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Preference number: 4 (lower is better) Translates to: PSQPLAATRGTSLACCQEGSTQC*RGRASD Trigger: ATCTGATGCTCTACCCCTTCAGCACTGAGTACTGCC...CTCTTGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR TCA 90 bp | GTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTCTTGTGCAGGCGGAAGGGTaGTCTGTTGGGATGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: VRLRIGHFGNPRQVSAPLVQAEG*SVGMGT Trigger: GGTGCCCATCCCAACAGATCACCCTTCCGCCTGCAC...AAGAGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR GCA 90 bp | GTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTCTTGCCCATCTGGCCCAGTaGAGCGCCCATCAACAGCAC | + |
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Preference number: 4 (lower is better) Translates to: VRLRIGHFGNPRQVSAPLAHLAQ*SAHQQH Trigger: GTGCTGTTGATGGGCGCTGCACTGGGCCAGATGGGC...AAGAGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR GCA 90 bp | AATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCCCCGACAGAGTGCATaGGGTAGAACACACCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NFILTLTAFGSHPGYILGPRQSA*GRTHPG Trigger: CCCTGGGTGTGTTCTACCGCATGCACTCTGTCGGGG...GCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR CCA 90 bp | CACAATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCACGCCAGGCTCATaGTGGGCAGCACAGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: HNFILTLTAFGSHPGYILGTPGS*WAAQPH Trigger: ATGTGGCTGTGCTGCCCACCATGAGCCTGGCGTGCC...AAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR CCA 90 bp | TCAGTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTGGCACGCCAGGCTCATaGTGGGCAGCACAGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: SVRLRIGHFGNPRQVSAPGTPGS*WAAQPH Trigger: ATGTGGCTGTGCTGCCCACCATGAGCCTGGCGTGCC...AGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR CCA 90 bp | TTGGGCCCTGCCTGGCAGCTAATGAATGAGCTCATTAGGAGATGGGCGTGTGGGCCCGTTCTCAAACTCTaGGTGTATGCCGAAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: LGPAWQLMNELIRRWACGPVLKL*VYAEGG Trigger: CCCGCCTTCGGCATACACCCAGAGTTTGAGAACGGG...CCCACACGCCCATCTCCTAATGAGCTCATTCATTAGCTGCCAGGCAGGGCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR TCA 90 bp | GGGCAGGGCTGCCTGCCAAGCTTGGAGTGCTGGGGTTTGAGCTCTCAGTTGGAGAAGTTGGTCTGCACCTaGACACAGTCCTTACAGTGT | + |
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Preference number: 4 (lower is better) Translates to: GQGCLPSLECWGLSSQLEKLVCT*TQSLQC Trigger: ACACTGTAAGGACTGTGTTCAGGTGCAGACCAACTT...CTCCAACTGAGAGCTCAAACCCCAGCACTCCAAGCTTGGCAGGCAGCCCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR TCA 90 bp | CGATCAAACAAACAGGGTTTATGGAAGCCGGAAAGAGTTGTTGGGCCCTGCCTGGTGCAGGCGGAAGGGTaGTCTGTTGGGATGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: RSNKQGLWKPERVVGPCLVQAEG*SVGMGT Trigger: GGTGCCCATCCCAACAGATCACCCTTCCGCCTGCAC...CAGGCAGGGCCCAACAACTCTTTCCGGCTTCCATAAACCCTGTTTGTTTGATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR GCA 90 bp | GGGCAGGGCTGCCTGCCAAGCTTGGAGTGCTGGGGTTTGAGCTCTCAGTTGGAGCTTAGTCTCCATGTCTaGTTGGTCATAGGAGGATGC | + |
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Preference number: 4 (lower is better) Translates to: GQGCLPSLECWGLSSQLELSLHV*LVIGGC Trigger: GCATCCTCCTATGACCAAGCAGACATGGAGACTAAG...CTCCAACTGAGAGCTCAAACCCCAGCACTCCAAGCTTGGCAGGCAGCCCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR GCA 90 bp | GTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTCTTATCACGGTACAGGACTaGGTGGGGCTTCCGGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: VRLRIGHFGNPRQVSAPLITVQD*VGLPGG Trigger: ACCACCCGGAAGCCCCACGCAGTCCTGTACCGTGAT...AAGAGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS-3UTR GCA 90 bp | CACAATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTATCACGGTACAGGACTaGGTGGGGCTTCCGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HNFILTLTAFGSHPGYILITVQD*VGLPGG Trigger: ACCACCCGGAAGCCCCACGCAGTCCTGTACCGTGAT...AAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR GCA 90 bp | CGATCAAACAAACAGGGTTTATGGAAGCCGGAAAGAGTTGTTGGGCCCTGCCTGGCCCATCTGGCCCAGTaGAGCGCCCATCAACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSNKQGLWKPERVVGPCLAHLAQ*SAHQQH Trigger: GTGCTGTTGATGGGCGCTGCACTGGGCCAGATGGGC...CAGGCAGGGCCCAACAACTCTTTCCGGCTTCCATAAACCCTGTTTGTTTGATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CCA 90 bp | CACAATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTCTTCTGGAGAAGGCATaGGTGCAGGCTCAGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HNFILTLTAFGSHPGYILLLEKA*VQAQQG Trigger: CCCCTGCTGAGCCTGCACCCATGCCTTCTCCAGAAG...AAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCAAGAGGGTGCATGGAGTCATTaGTCACAGCCAAAACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PSQPLAATRGTSLACCQEGAWSH*SQPKPT Trigger: TGTGGGTTTTGGCTGTGACCAATGACTCCATGCACC...CTCTTGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CCA 90 bp | CTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCACAATCTCACGGTGCATaGAGTCATTGGTCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTLTAFGSHPGYILGLLSQSHGA*SHWSQP Trigger: TGGCTGTGACCAATGACTCCATGCACCGTGAGATTG...TGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCAAGAGCAATCTCACGGTGCATaGAGTCATTGGTCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSQPLAATRGTSLACCQEQSHGA*SHWSQP Trigger: TGGCTGTGACCAATGACTCCATGCACCGTGAGATTG...CTCTTGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR TCA 90 bp | AATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCGCACACTGTGGTGTTaGGGCACATGCAAGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFILTLTAFGSHPGYILGRTLWC*GTCKCW Trigger: CCAACACTTGCATGTGCCTCAACACCACAGTGTGCG...GCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGCCCTGCCTGGCAGCTAATGAATGAGCTCATTAGGAGATGGGCGTGTGGGACGCATAGTAGAGGGTaGAGTACTGGCGGGCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LGPAWQLMNELIRRWACGTHSRG*STGGLC Trigger: ACATAGCCCGCCAGTACTTCACCCTCTACTATGCGT...CCCACACGCCCATCTCCTAATGAGCTCATTCATTAGCTGCCAGGCAGGGCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGCCCTGCCTGGCAGCTAATGAATGAGCTCATTAGGAGATGGGCGTGTGGGTCCCTCAGTGGTCTTTaGTTCTGGAGAAGGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGPAWQLMNELIRRWACGSLSGL*FWRRHG Trigger: CCCATGCCTTCTCCAGAAGCAAAGACCACTGAGGGA...CCCACACGCCCATCTCCTAATGAGCTCATTCATTAGCTGCCAGGCAGGGCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR GCA 90 bp | CACAATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGAGAGGACCTTCAGTaGAGCCAGCAGGATCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: HNFILTLTAFGSHPGYILGEDLQ*SQQDPH Trigger: GTGTGGATCCTGCTGGCTGCACTGAAGGTCCTCTCC...AAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTGGAGAGGACCTTCAGTaGAGCCAGCAGGATCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SVRLRIGHFGNPRQVSAPGEDLQ*SQQDPH Trigger: GTGTGGATCCTGCTGGCTGCACTGAAGGTCCTCTCC...AGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR GCA 90 bp | AGTATCCTCTCCTCCTCAGTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGTGGAGAAGTAGGCGATaGCCATCTGGCCCAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SILSSSVRLRIGHFGNPRWRSRR*PSGPVQ Trigger: CTGCACTGGGCCAGATGGGCATCGCCTACTTCTCCA...CCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGACTGAGGAGGAGAGGATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR GCA 90 bp | CGATCAAACAAACAGGGTTTATGGAAGCCGGAAAGAGTTGTTGGGCCCTGCCTGCCCCGACAGAGTGCATaGGGTAGAACACACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSNKQGLWKPERVVGPCLPRQSA*GRTHPG Trigger: CCCTGGGTGTGTTCTACCGCATGCACTCTGTCGGGG...CAGGCAGGGCCCAACAACTCTTTCCGGCTTCCATAAACCCTGTTTGTTTGATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTCAAAAGGCCCAGCAGTaGCCCAAAGATGGTCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVRLRIGHFGNPRQVSAPQKAQQ*PKDGPV Trigger: CACGGGACCATCTTTGGGCCACTGCTGGGCCTTTTG...AGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTCTTCCCGTTCTCAAACTCTaGGTGTATGCCGAAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRLRIGHFGNPRQVSAPLPVLKL*VYAEGG Trigger: CCCGCCTTCGGCATACACCCAGAGTTTGAGAACGGG...AAGAGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| 3UTR CAA 72 bp | GTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTCTaGATGCGACGTGTCTGCCCAGATACTCCCGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTLGTPGRFLHL*MRRVCPDTPEF Trigger: AAACTCGGGAGTATCTGGGCAGACACGTCGCATCAAGAGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| 3UTR CAA 72 bp | CCTGTTGTCAAGAGGCTCAGTTTCCAAGCCCCACCCTaGGTTTTGAGCTCCAGGCAGTATCCTCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVVKRLSFQAPP*VLSSRQYPLLL Trigger: GAGGAGGAGAGGATACTGCCTGGAGCTCAAAACCAAGGGTGGGGCTTGGAAACTGAGCCTCTTGACAACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR TCA 90 bp | AATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCGGCAGTACTCAGTGCTaGAGGGGTAGAGCATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NFILTLTAFGSHPGYILGGSTQC*RGRASD Trigger: ATCTGATGCTCTACCCCTTCAGCACTGAGTACTGCC...GCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR TCA 90 bp | GTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTCTTTGCGTGTGGGGTTTTTaGGCGTGTCCAATTCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VRLRIGHFGNPRQVSAPLCVWGF*ACPIRA Trigger: AGCGCGAATTGGACACGCTCAAAAACCCCACACGCA...AAGAGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CCA 90 bp | CGATCAAACAAACAGGGTTTATGGAAGCCGGAAAGAGTTGTTGGGCCCTGCCTGACGCCAGGCTCATGGTaGGCAGCACAGCCACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSNKQGLWKPERVVGPCLTPGSW*AAQPHR Trigger: TCTATGTGGCTGTGCTGCCCACCATGAGCCTGGCGT...CAGGCAGGGCCCAACAACTCTTTCCGGCTTCCATAAACCCTGTTTGTTTGATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR TCA 90 bp | CGATCAAACAAACAGGGTTTATGGAAGCCGGAAAGAGTTGTTGGGCCCTGCCTGCGCACACTGTGGTGTTaGGGCACATGCAAGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSNKQGLWKPERVVGPCLRTLWC*GTCKCW Trigger: CCAACACTTGCATGTGCCTCAACACCACAGTGTGCG...CAGGCAGGGCCCAACAACTCTTTCCGGCTTCCATAAACCCTGTTTGTTTGATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR TCA 90 bp | CACAATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTTCACGTTCTTCCACATaGCGAAGAGCACAGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HNFILTLTAFGSHPGYILSRSST*RRAQHS Trigger: GCTGTGCTGTGCTCTTCGTCATGTGGAAGAACGTGA...AAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTACGCATAGTAGAGGGTaGAGTACTGGCGGGCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: SVRLRIGHFGNPRQVSAPTHSRG*STGGLC Trigger: ACATAGCCCGCCAGTACTTCACCCTCTACTATGCGT...AGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR TCA 90 bp | CGATCAAACAAACAGGGTTTATGGAAGCCGGAAAGAGTTGTTGGGCCCTGCCTGTGCGTGTGGGGTTTTTaGGCGTGTCCAATTCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSNKQGLWKPERVVGPCLCVWGF*ACPIRA Trigger: AGCGCGAATTGGACACGCTCAAAAACCCCACACGCA...CAGGCAGGGCCCAACAACTCTTTCCGGCTTCCATAAACCCTGTTTGTTTGATCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR GCA 90 bp | CGATCAAACAAACAGGGTTTATGGAAGCCGGAAAGAGTTGTTGGGCCCTGCCTGAACAGCAGGGAGAAATaGCGAGCCAGCCAGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSNKQGLWKPERVVGPCLNSREK*RASQDF Trigger: GAAGTCCTGGCTGGCTCGGCATTTCTCCCTGCTGTT...CAGGCAGGGCCCAACAACTCTTTCCGGCTTCCATAAACCCTGTTTGTTTGATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR GCA 90 bp | AATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCGCCTCAATCTCACGGTaGATGGAGTCATTGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: NFILTLTAFGSHPGYILGASISR*MESLVT Trigger: TGTGACCAATGACTCCATGCACCGTGAGATTGAGGC...GCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CCA 90 bp | CACAATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTAGTGGTCTTTGCTTCTaGAGAAGGCATGGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HNFILTLTAFGSHPGYILSGLCF*RRHGCR Trigger: CCTGCACCCATGCCTTCTCCAGAAGCAAAGACCACT...AAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTAGTGGTCTTTGCTTCTaGAGAAGGCATGGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVRLRIGHFGNPRQVSAPSGLCF*RRHGCR Trigger: CCTGCACCCATGCCTTCTCCAGAAGCAAAGACCACT...AGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR TCA 90 bp | CTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCACAGAGCACCCATGTCTaGATAATCATAAAGACAATC | + |
|
Preference number: 4 (lower is better) Translates to: LTLTAFGSHPGYILGLLSQSTHV*IIIKTI Trigger: GATTGTCTTTATGATTATTCAGACATGGGTGCTCTG...TGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCAAGAGCAGAGCACCCATGTCTaGATAATCATAAAGACAATC | + |
|
Preference number: 4 (lower is better) Translates to: PSQPLAATRGTSLACCQEQSTHV*IIIKTI Trigger: GATTGTCTTTATGATTATTCAGACATGGGTGCTCTG...CTCTTGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR TCA 90 bp | CGATCAAACAAACAGGGTTTATGGAAGCCGGAAAGAGTTGTTGGGCCCTGCCTGTCACGTTCTTCCACATaGCGAAGAGCACAGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSNKQGLWKPERVVGPCLSRSST*RRAQHS Trigger: GCTGTGCTGTGCTCTTCGTCATGTGGAAGAACGTGA...CAGGCAGGGCCCAACAACTCTTTCCGGCTTCCATAAACCCTGTTTGTTTGATCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR GCA 90 bp | CGATCAAACAAACAGGGTTTATGGAAGCCGGAAAGAGTTGTTGGGCCCTGCCTGTCCCTCAGTGGTCTTTaGTTCTGGAGAAGGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSNKQGLWKPERVVGPCLSLSGL*FWRRHG Trigger: CCCATGCCTTCTCCAGAAGCAAAGACCACTGAGGGA...CAGGCAGGGCCCAACAACTCTTTCCGGCTTCCATAAACCCTGTTTGTTTGATCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR TCA 90 bp | AGTATCCTCTCCTCCTCAGTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGAAGTTGGTCTGCACCTaGACACAGTCCTTACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SILSSSVRLRIGHFGNPRKLVCT*TQSLQC Trigger: ACACTGTAAGGACTGTGTTCAGGTGCAGACCAACTT...CCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGACTGAGGAGGAGAGGATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTCTTCTTAGTCTCCATGTCTaGTTGGTCATAGGAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: VRLRIGHFGNPRQVSAPLLSLHV*LVIGGC Trigger: GCATCCTCCTATGACCAAGCAGACATGGAGACTAAG...AAGAGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR GCA 90 bp | CGATCAAACAAACAGGGTTTATGGAAGCCGGAAAGAGTTGTTGGGCCCTGCCTGGCCTCAATCTCACGGTaGATGGAGTCATTGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RSNKQGLWKPERVVGPCLASISR*MESLVT Trigger: TGTGACCAATGACTCCATGCACCGTGAGATTGAGGC...CAGGCAGGGCCCAACAACTCTTTCCGGCTTCCATAAACCCTGTTTGTTTGATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CCA 90 bp | AATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCCACTCGCTTCGATTTaGAAGAGCACAAAGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: NFILTLTAFGSHPGYILGPLASI*KSTKTH Trigger: ATGTGTCTTTGTGCTCTTCCAAATCGAAGCGAGTGG...GCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR TCA 90 bp | AATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCATGATGAAGAGATTCTaGGTGATGTGCTGCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: NFILTLTAFGSHPGYILGMMKRF*VMCCRI Trigger: AATCCTGCAGCACATCACTCAGAATCTCTTCATCAT...GCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTCTTCCACTCGCTTCGATTTaGAAGAGCACAAAGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: VRLRIGHFGNPRQVSAPLPLASI*KSTKTH Trigger: ATGTGTCTTTGTGCTCTTCCAAATCGAAGCGAGTGG...AAGAGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR TCA 90 bp | GTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTCTTATGATGAAGAGATTCTaGGTGATGTGCTGCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VRLRIGHFGNPRQVSAPLMMKRF*VMCCRI Trigger: AATCCTGCAGCACATCACTCAGAATCTCTTCATCAT...AAGAGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS CCA 90 bp | CTGCCGAAGAGCACCAGGGAGCCCCTCACCCAGATGGGTCCCGCGTaGGGATCACGGTACAGGACTGCGTGGGGCTTCCGGGTGGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: LPKSTREPLTQMGPA*GSRYRTAWGFRVVP Trigger: GGGTACCACCCGGAAGCCCCACGCAGTCCTGTACCGTGATCCCCACGCGGGACCCATCTGGGTGAGGGGCTCCCTGGTGCTCTTCGGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS TCA 90 bp | AAGGCCCAGCAGTGGCCCAAAGATGGTCCCGTGCAGGCGGAAGGGTaGTCTGTTGGGATGGGCACCTGTGTGGGCTGCCAGGCTGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KAQQWPKDGPVQAEG*SVGMGTCVGCQAAA Trigger: AGCCGCAGCCTGGCAGCCCACACAGGTGCCCATCCCAACAGATCACCCTTCCGCCTGCACGGGACCATCTTTGGGCCACTGCTGGGCCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS GCA 90 bp | CCACCCAGGAATACCACATTGAGAGCCAGGAGCCCGGAGAAGAGCTaGCCGGCCTTCTGGGCCTGTCGGTCTCTCCGCAACAGCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPRNTTLRARSPEKS*PAFWACRSLRNSRE Trigger: CTCCCTGCTGTTGCGGAGAGACCGACAGGCCCAGAAGGCCGGGCAGCTCTTCTCCGGGCTCCTGGCTCTCAATGTGGTATTCCTGGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS CCA 90 bp | GCAGTGGCCCAAAGATGGTCCCGTGCAGGCGGAAGGGTGATCTGTTaGGATGGGCACCTGTGTGGGCTGCCAGGCTGCGGCTCACGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AVAQRWSRAGGRVIC*DGHLCGLPGCGSRS Trigger: AGAACGTGAGCCGCAGCCTGGCAGCCCACACAGGTGCCCATCCCAACAGATCACCCTTCCGCCTGCACGGGACCATCTTTGGGCCACTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS CCA 90 bp | GTCCCGCGTGGGGATCACGGTACAGGACTGCGTGGGGCTTCCGGGTaGTACCCACTGTGTAGTAGAGGAGCCACAACAGGGAGAGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: VPRGDHGTGLRGASG*YPLCSRGATTGRGP Trigger: AGGTCCTCTCCCTGTTGTGGCTCCTCTACTACACAGTGGGTACCACCCGGAAGCCCCACGCAGTCCTGTACCGTGATCCCCACGCGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS CCA 90 bp | GTCCCGTGCAGGCGGAAGGGTGATCTGTTGGGATGGGCACCTGTGTaGGCTGCCAGGCTGCGGCTCACGTTCTTCCACATGACGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VPCRRKGDLLGWAPV*AARLRLTFFHMTKS Trigger: GCTCTTCGTCATGTGGAAGAACGTGAGCCGCAGCCTGGCAGCCCACACAGGTGCCCATCCCAACAGATCACCCTTCCGCCTGCACGGGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS CCA 90 bp | CGTGTGGGGTTTTTGAGCGTGTCCAATTCGCGCTCCTCCAGCCCATaGATGGCTGTACCAGCCAGGCACGCCAGGCTCATGGTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVGFLSVSNSRSSSP*MAVPARHARLMVGS Trigger: GCTGCCCACCATGAGCCTGGCGTGCCTGGCTGGTACAGCCATCCATGGGCTGGAGGAGCGCGAATTGGACACGCTCAAAAACCCCACACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS CCA 90 bp | ATACGCCAGCCACCAGTGCCAAAAGGCCCAGCAGTGGCCCAAAGATaGTCCCGTGCAGGCGGAAGGGTGATCTGTTGGGATGGGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: IRQPPVPKGPAVAQR*SRAGGRVICWDGHL Trigger: CAGGTGCCCATCCCAACAGATCACCCTTCCGCCTGCACGGGACCATCTTTGGGCCACTGCTGGGCCTTTTGGCACTGGTGGCTGGCGTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS TCA 90 bp | CAGCGCCCATCAACAGCACCACATCCAGGCTGCGTGTGGGGTTTTTaGGCGTGTCCAATTCGCGCTCCTCCAGCCCATGGATGGCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QRPSTAPHPGCVWGF*ACPIRAPPAHGWLY Trigger: GTACAGCCATCCATGGGCTGGAGGAGCGCGAATTGGACACGCTCAAAAACCCCACACGCAGCCTGGATGTGGTGCTGTTGATGGGCGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS GCA 90 bp | CGCTTCGATTTGGAAGAGCACAAAGACACATACGCCAGCCACCAGTaGCAAAAGGCCCAGCAGTGGCCCAAAGATGGTCCCGTGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RFDLEEHKDTYASHQ*QKAQQWPKDGPVQA Trigger: CGCCTGCACGGGACCATCTTTGGGCCACTGCTGGGCCTTTTGGCACTGGTGGCTGGCGTATGTGTCTTTGTGCTCTTCCAAATCGAAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCAAGAGCTCCCTCAGTGGTCTTaGCTTCTGGAGAAGGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PSQPLAATRGTSLACCQELPQWS*LLEKAW Trigger: CCATGCCTTCTCCAGAAGCAAAGACCACTGAGGGAG...CTCTTGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | CTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCACTCCCTCAGTGGTCTTaGCTTCTGGAGAAGGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LTLTAFGSHPGYILGLLSLPQWS*LLEKAW Trigger: CCATGCCTTCTCCAGAAGCAAAGACCACTGAGGGAG...TGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGGCTGCCTGCCAAGCTTGGAGTGCTGGGGTTTGAGCTCTCAGTTGGAGAGTCTCCATGTCTGCTaGGTCATAGGAGGATGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQGCLPSLECWGLSSQLESLHVC*VIGGCS Trigger: GGAGCATCCTCCTATGACCAAGCAGACATGGAGACT...CTCCAACTGAGAGCTCAAACCCCAGCACTCCAAGCTTGGCAGGCAGCCCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS GCA 90 bp | ACCCACTGTGTAGTAGAGGAGCCACAACAGGGAGAGGACCTTCAGTaGAGCCAGCAGGATCCACACGTCCCCCAGAGTGACAGACACCTT | + |
|
Preference number: 5 (lower is better) Translates to: THCVVEEPQQGEDLQ*SQQDPHVPQSDRHL Trigger: AAGGTGTCTGTCACTCTGGGGGACGTGTGGATCCTGCTGGCTGCACTGAAGGTCCTCTCCCTGTTGTGGCTCCTCTACTACACAGTGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS GCA 90 bp | TCACGTCATAACCCATTCGAAATATGTTCAGGCAGACGGTACAGCTaGCGAAGAGCACCAGGGAGCCCCTCACCCAGATGGGTCCCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SRHNPFEICSGRRYS*RRAPGSPSPRWVPR Trigger: ACGCGGGACCCATCTGGGTGAGGGGCTCCCTGGTGCTCTTCGGCAGCTGTACCGTCTGCCTGAACATATTTCGAATGGGTTATGACGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCTGTTGTCAAGAGAGTCTCCATGTCTGCTaGGTCATAGGAGGATGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSQPLAATRGTSLACCQESLHVC*VIGGCS Trigger: GGAGCATCCTCCTATGACCAAGCAGACATGGAGACT...CTCTTGACAACAGGCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | AATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCCCCAGGAATACCACATaGAGAGCCAGGAGCCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NFILTLTAFGSHPGYILGPRNTT*RARSPE Trigger: CTCCGGGCTCCTGGCTCTCAATGTGGTATTCCTGGG...GCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS TCA 90 bp | GGCTCATGGTGGGCAGCACAGCCACATAGAACGCATAGTAGAGGGTaGAGTACTGGCGGGCTATGTCAGGGCCACTCGCTTCGATTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSWWAAQPHRTHSRG*STGGLCQGHSLRFG Trigger: TCCAAATCGAAGCGAGTGGCCCTGACATAGCCCGCCAGTACTTCACCCTCTACTATGCGTTCTATGTGGCTGTGCTGCCCACCATGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS GCA 90 bp | GGACCCCGCATGCTTAGTCTCCATGTCTGCTTGGTCATAGGAGGATaGTCCCTCAGTGGTCTTTGCTTCTGGAGAAGGCATGGGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPRMLSLHVCLVIGG*SLSGLCFWRRHGCR Trigger: CCTGCACCCATGCCTTCTCCAGAAGCAAAGACCACTGAGGGAGCATCCTCCTATGACCAAGCAGACATGGAGACTAAGCATGCGGGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | AGTATCCTCTCCTCCTCAGTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCGGAAGGGTGATCTGTaGGGATGGGCACCTGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SILSSSVRLRIGHFGNPRRKGDL*GWAPVW Trigger: CCACACAGGTGCCCATCCCAACAGATCACCCTTCCG...CCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGACTGAGGAGGAGAGGATACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | CACAATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTCGGAAGGGTGATCTGTaGGGATGGGCACCTGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HNFILTLTAFGSHPGYILRKGDL*GWAPVW Trigger: CCACACAGGTGCCCATCCCAACAGATCACCCTTCCG...AAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | TTGGGCCCTGCCTGGCAGCTAATGAATGAGCTCATTAGGAGATGGGCGTGTGGGATCCTGCGTTTCCAGTaGAGGTGGCTGAAGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGPAWQLMNELIRRWACGILRFQ*RWLKEW Trigger: CCACTCCTTCAGCCACCTCAACTGGAAACGCAGGAT...CCCACACGCCCATCTCCTAATGAGCTCATTCATTAGCTGCCAGGCAGGGCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS CCA 90 bp | AGGGTGAAGTACTGGCGGGCTATGTCAGGGCCACTCGCTTCGATTTaGAAGAGCACAAAGACACATACGCCAGCCACCAGTGCCAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RVKYWRAMSGPLASI*KSTKTHTPATSAKR Trigger: CCTTTTGGCACTGGTGGCTGGCGTATGTGTCTTTGTGCTCTTCCAAATCGAAGCGAGTGGCCCTGACATAGCCCGCCAGTACTTCACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS TCA 90 bp | GCACACTGTGGTGTTGAGGCACATGCAAGTGTTGGTCCCGTTACCTaGGAGGAGATAGGGCAGGAAAAGACAGCATCTCAGGCAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AHCGVEAHASVGPVT*EEIGQEKTASQAGP Trigger: AGGACCTGCCTGAGATGCTGTCTTTTCCTGCCCTATCTCCTCTCAGGTAACGGGACCAACACTTGCATGTGCCTCAACACCACAGTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019006.5 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGGCTGCCTGCCAAGCTTGGAGTGCTGGGGTTTGAGCTCTCAGTTGGAGAGAGTGACAGACACCTaGTTGAATATCATGCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: GQGCLPSLECWGLSSQLERVTDT*LNIMLQ Trigger: CTGTAGCATGATATTCAACAAGGTGTCTGTCACTCT...CTCCAACTGAGAGCTCAAACCCCAGCACTCCAAGCTTGGCAGGCAGCCCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | CACAATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTCGGTGCATGGAGTCATaGGTCACAGCCAAAACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HNFILTLTAFGSHPGYILRCMES*VTAKTH Trigger: GTGGGTTTTGGCTGTGACCAATGACTCCATGCACCG...AAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | CGATCAAACAAACAGGGTTTATGGAAGCCGGAAAGAGTTGTTGGGCCCTGCCTGCGGTGCATGGAGTCATaGGTCACAGCCAAAACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSNKQGLWKPERVVGPCLRCMES*VTAKTH Trigger: GTGGGTTTTGGCTGTGACCAATGACTCCATGCACCG...CAGGCAGGGCCCAACAACTCTTTCCGGCTTCCATAAACCCTGTTTGTTTGATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | AATTTCATACTGACCCTCACAGCCTTTGGCAGCCACCCGGGGTACATCCTTGGCGCCACTCGCTTCGATTaGGAAGAGCACAAAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: NFILTLTAFGSHPGYILGATRFD*EEHKDT Trigger: TGTGTCTTTGTGCTCTTCCAAATCGAAGCGAGTGGC...GCCAAGGATGTACCCCGGGTGGCTGCCAAAGGCTGTGAGGGTCAGTATGAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | CGATCAAACAAACAGGGTTTATGGAAGCCGGAAAGAGTTGTTGGGCCCTGCCTGATCCTGCGTTTCCAGTaGAGGTGGCTGAAGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSNKQGLWKPERVVGPCLILRFQ*RWLKEW Trigger: CCACTCCTTCAGCCACCTCAACTGGAAACGCAGGAT...CAGGCAGGGCCCAACAACTCTTTCCGGCTTCCATAAACCCTGTTTGTTTGATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS GCA 90 bp | GAGAACTTCTCCATGAGGGCGTCGAGCTCAGCCTCAATCTCACGGTaGATGGAGTCATTGGTCACAGCCAAAACCCACATCAGCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ENFSMRASSSASISR*MESLVTAKTHISKF Trigger: AAACTTGCTGATGTGGGTTTTGGCTGTGACCAATGACTCCATGCACCGTGAGATTGAGGCTGAGCTCGACGCCCTCATGGAGAAGTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTCTTGCCACTCGCTTCGATTaGGAAGAGCACAAAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: VRLRIGHFGNPRQVSAPLATRFD*EEHKDT Trigger: TGTGTCTTTGTGCTCTTCCAAATCGAAGCGAGTGGC...AAGAGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTAAGAGAGAGATCTCCTaGAGCATCCTGCGTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVRLRIGHFGNPRQVSAPKREIS*SILRFQ Trigger: CTGGAAACGCAGGATGCTCAAGGAGATCTCTCTCTT...AGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGCAGGTTTCTGCACCTCTTGTGACAGACACCTTGTaGAATATCATGCTACAGATA | + |
|
Preference number: 5 (lower is better) Translates to: VRLRIGHFGNPRQVSAPLVTDTL*NIMLQI Trigger: TATCTGTAGCATGATATTCAACAAGGTGTCTGTCAC...AAGAGGTGCAGAAACCTGCCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS-3UTR CAA 90 bp | AGTATCCTCTCCTCCTCAGTCAGGTTGAGGATAGGTCACTTTGGGAACCCCAGGGTGACAGACACCTTGTaGAATATCATGCTACAGATA | + |
|
Preference number: 5 (lower is better) Translates to: SILSSSVRLRIGHFGNPRVTDTL*NIMLQI Trigger: TATCTGTAGCATGATATTCAACAAGGTGTCTGTCAC...CCTGGGGTTCCCAAAGTGACCTATCCTCAACCTGACTGAGGAGGAGAGGATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS CCA 72 bp | AGCACCAGGGAGCCCCTCACCCAGATGGGTCCCGCGTaGGGATCACGGTACAGGACTGCGTGGGGCTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: STREPLTQMGPA*GSRYRTAWGFR Trigger: CCGGAAGCCCCACGCAGTCCTGTACCGTGATCCCCACGCGGGACCCATCTGGGTGAGGGGCTCCCTGGTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS CCA 72 bp | ATGGTCCCGTGCAGGCGGAAGGGTGATCTGTTGGGATaGGCACCTGTGTGGGCTGCCAGGCTGCGGCTCACG | + |
|
Preference number: 6 (lower is better) Translates to: MVPCRRKGDLLG*APVWAARLRLT Trigger: CGTGAGCCGCAGCCTGGCAGCCCACACAGGTGCCCATCCCAACAGATCACCCTTCCGCCTGCACGGGACCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS CCA 72 bp | CAAAGATGGTCCCGTGCAGGCGGAAGGGTGATCTGTTaGGATGGGCACCTGTGTGGGCTGCCAGGCTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: QRWSRAGGRVIC*DGHLCGLPGCG Trigger: GCCGCAGCCTGGCAGCCCACACAGGTGCCCATCCCAACAGATCACCCTTCCGCCTGCACGGGACCATCTTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS CAA 72 bp | CCAAAGATGGTCCCGTGCAGGCGGAAGGGTGATCTGTaGGGATGGGCACCTGTGTGGGCTGCCAGGCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PKMVPCRRKGDL*GWAPVWAARLR Trigger: CCGCAGCCTGGCAGCCCACACAGGTGCCCATCCCAACAGATCACCCTTCCGCCTGCACGGGACCATCTTTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS CAA 90 bp | AGCAGTGGCCCAAAGATGGTCCCGTGCAGGCGGAAGGGTGATCTGTaGGGATGGGCACCTGTGTGGGCTGCCAGGCTGCGGCTCACGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSGPKMVPCRRKGDL*GWAPVWAARLRLTF Trigger: GAACGTGAGCCGCAGCCTGGCAGCCCACACAGGTGCCCATCCCAACAGATCACCCTTCCGCCTGCACGGGACCATCTTTGGGCCACTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS TCA 72 bp | CAGTGGCCCAAAGATGGTCCCGTGCAGGCGGAAGGGTaGTCTGTTGGGATGGGCACCTGTGTGGGCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QWPKDGPVQAEG*SVGMGTCVGCQ Trigger: CTGGCAGCCCACACAGGTGCCCATCCCAACAGATCACCCTTCCGCCTGCACGGGACCATCTTTGGGCCACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS GCA 72 bp | CCAGATGGGTCCCGCGTGGGGATCACGGTACAGGACTaGGTGGGGCTTCCGGGTGGTACCCACTGTGTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: PDGSRVGITVQD*VGLPGGTHCVV Trigger: TACTACACAGTGGGTACCACCCGGAAGCCCCACGCAGTCCTGTACCGTGATCCCCACGCGGGACCCATCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS GCA 72 bp | TCCCGCAGGGAGCCTCTGCGGGGTAGCTCAACATCCTaGTTCTCCATCACACCTGAGACCGCAGGCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRREPLRGSSTS*FSITPETAGSQ Trigger: CTGGGAGCCTGCGGTCTCAGGTGTGATGGAGAAGCAGGATGTTGAGCTACCCCGCAGAGGCTCCCTGCGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS GCA 72 bp | AATACCACATTGAGAGCCAGGAGCCCGGAGAAGAGCTaGCCGGCCTTCTGGGCCTGTCGGTCTCTCCGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: NTTLRARSPEKS*PAFWACRSLRN Trigger: GTTGCGGAGAGACCGACAGGCCCAGAAGGCCGGGCAGCTCTTCTCCGGGCTCCTGGCTCTCAATGTGGTATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS GCA 72 bp | CACGATGGAGAAGTAGGCGATGCCCATCTGGCCCAGTaGAGCGCCCATCAACAGCACCACATCCAGGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: HDGEVGDAHLAQ*SAHQQHHIQAA Trigger: CGCAGCCTGGATGTGGTGCTGTTGATGGGCGCTGCACTGGGCCAGATGGGCATCGCCTACTTCTCCATCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS GCA 72 bp | TCCGTAGGTCCTGACCCAGCTCCCGCAGGGAGCCTCTaGGGGGTAGCTCAACATCCTGCTTCTCCATCACAC | + |
|
Preference number: 6 (lower is better) Translates to: SVGPDPAPAGSL*GVAQHPASPSH Trigger: GTGTGATGGAGAAGCAGGATGTTGAGCTACCCCGCAGAGGCTCCCTGCGGGAGCTGGGTCAGGACCTACGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS CCA 72 bp | AGGCGGAAGGGTGATCTGTTGGGATGGGCACCTGTGTaGGCTGCCAGGCTGCGGCTCACGTTCTTCCACATG | + |
|
Preference number: 6 (lower is better) Translates to: RRKGDLLGWAPV*AARLRLTFFHM Trigger: CATGTGGAAGAACGTGAGCCGCAGCCTGGCAGCCCACACAGGTGCCCATCCCAACAGATCACCCTTCCGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS CCA 72 bp | CCACCAGTGCCAAAAGGCCCAGCAGTGGCCCAAAGATaGTCCCGTGCAGGCGGAAGGGTGATCTGTTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PPVPKGPAVAQR*SRAGGRVICWD Trigger: ATCCCAACAGATCACCCTTCCGCCTGCACGGGACCATCTTTGGGCCACTGCTGGGCCTTTTGGCACTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS CAA 90 bp | GCAGCGCCCATCAACAGCACCACATCCAGGCTGCGTGTGGGGTTTTaGAGCGTGTCCAATTCGCGCTCCTCCAGCCCATGGATGGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: AAPINSTTSRLRVGF*SVSNSRSSSPWMAV Trigger: TACAGCCATCCATGGGCTGGAGGAGCGCGAATTGGACACGCTCAAAAACCCCACACGCAGCCTGGATGTGGTGCTGTTGATGGGCGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
||
| CDS GCA 72 bp | GTAGTAGAGGAGCCACAACAGGGAGAGGACCTTCAGTaGAGCCAGCAGGATCCACACGTCCCCCAGAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: VVEEPQQGEDLQ*SQQDPHVPQSD Trigger: GTCACTCTGGGGGACGTGTGGATCCTGCTGGCTGCACTGAAGGTCCTCTCCCTGTTGTGGCTCCTCTACTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS CCA 72 bp | TTTTTGAGCGTGTCCAATTCGCGCTCCTCCAGCCCATaGATGGCTGTACCAGCCAGGCACGCCAGGCTCATG | + |
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Preference number: 6 (lower is better) Translates to: FLSVSNSRSSSP*MAVPARHARLM Trigger: CATGAGCCTGGCGTGCCTGGCTGGTACAGCCATCCATGGGCTGGAGGAGCGCGAATTGGACACGCTCAAAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS CCA 72 bp | ATGCTCCCTCAGTGGTCTTTGCTTCTGGAGAAGGCATaGGTGCAGGCTCAGCAGGGGCTGAAGTCTGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: MLPQWSLLLEKA*VQAQQGLKSAK Trigger: CTTCGCAGACTTCAGCCCCTGCTGAGCCTGCACCCATGCCTTCTCCAGAAGCAAAGACCACTGAGGGAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS CCA 72 bp | CATGGATGGCTGTACCAGCCAGGCACGCCAGGCTCATaGTGGGCAGCACAGCCACATAGAACGCATAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: HGWLYQPGTPGS*WAAQPHRTHSR Trigger: TCTACTATGCGTTCTATGTGGCTGTGCTGCCCACCATGAGCCTGGCGTGCCTGGCTGGTACAGCCATCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS CAA 90 bp | TCTCCATGTCTGCTTGGTCATAGGAGGATGCTCCCTCAGTGGTCTTaGCTTCTGGAGAAGGCATGGGTGCAGGCTCAGCAGGGGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SPCLLGHRRMLPQWS*LLEKAWVQAQQGLK Trigger: CTTCAGCCCCTGCTGAGCCTGCACCCATGCCTTCTCCAGAAGCAAAGACCACTGAGGGAGCATCCTCCTATGACCAAGCAGACATGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS TCA 72 bp | TGGGCAGCACAGCCACATAGAACGCATAGTAGAGGGTaGAGTACTGGCGGGCTATGTCAGGGCCACTCGCTT | + |
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Preference number: 6 (lower is better) Translates to: WAAQPHRTHSRG*STGGLCQGHSL Trigger: AAGCGAGTGGCCCTGACATAGCCCGCCAGTACTTCACCCTCTACTATGCGTTCTATGTGGCTGTGCTGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS TCA 72 bp | GGTGTTGAGGCACATGCAAGTGTTGGTCCCGTTACCTaGGAACTTCTCCATGAGGGCGTCGAGCTCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GVEAHASVGPVT*ELLHEGVELSL Trigger: GAGGCTGAGCTCGACGCCCTCATGGAGAAGTTCTCAGGTAACGGGACCAACACTTGCATGTGCCTCAACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106543.8 |
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| CDS GCA 72 bp | AACCCATTCGAAATATGTTCAGGCAGACGGTACAGCTaGCGAAGAGCACCAGGGAGCCCCTCACCCAGATGG | + |
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Preference number: 6 (lower is better) Translates to: NPFEICSGRRYS*RRAPGSPSPRW Trigger: CCATCTGGGTGAGGGGCTCCCTGGTGCTCTTCGGCAGCTGTACCGTCTGCCTGAACATATTTCGAATGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS CAA 72 bp | GTACTGGCGGGCTATGTCAGGGCCACTCGCTTCGATTaGGAAGAGCACAAAGACACATACGCCAGCCACCAG | + |
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Preference number: 6 (lower is better) Translates to: VLAGYVRATRFD*EEHKDTYASHQ Trigger: CTGGTGGCTGGCGTATGTGTCTTTGTGCTCTTCCAAATCGAAGCGAGTGGCCCTGACATAGCCCGCCAGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS CAA 90 bp | GAGGGTGAAGTACTGGCGGGCTATGTCAGGGCCACTCGCTTCGATTaGGAAGAGCACAAAGACACATACGCCAGCCACCAGTGCCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: EGEVLAGYVRATRFD*EEHKDTYASHQCQK Trigger: CTTTTGGCACTGGTGGCTGGCGTATGTGTCTTTGTGCTCTTCCAAATCGAAGCGAGTGGCCCTGACATAGCCCGCCAGTACTTCACCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS TCA 72 bp | AAGACAGCATCTCAGGCAGGTCCTGCACTGAAGAACTaGGAACTTCTCCATGAGGGCGTCGAGCTCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: KTASQAGPALKN*ELLHEGVELSL Trigger: GAGGCTGAGCTCGACGCCCTCATGGAGAAGTTCTCAGTTCTTCAGTGCAGGACCTGCCTGAGATGCTGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019006.5 |
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| CDS TCA 72 bp | GGCAGGAAAAGACAGCATCTCAGGCAGGTCCTGCACTaGAGAACTGAGAACTTCTCCATGAGGGCGTCGAGC | + |
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Preference number: 6 (lower is better) Translates to: GRKRQHLRQVLH*RTENFSMRASS Trigger: GCTCGACGCCCTCATGGAGAAGTTCTCAGTTCTTCAGTGCAGGACCTGCCTGAGATGCTGTCTTTTCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019006.5 |
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| CDS TCA 72 bp | GATAGCCCTTCCGGAAGACCTCGCACACTGTGGTGTTaGGGCACATGCAAGTGTTGGTCCCGTTACCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: DSPSGRPRTLWC*GTCKCWSRYLR Trigger: TCTCAGGTAACGGGACCAACACTTGCATGTGCCTCAACACCACAGTGTGCGAGGTCTTCCGGAAGGGCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS GCA 72 bp | TCCATGAGGGCGTCGAGCTCAGCCTCAATCTCACGGTaGATGGAGTCATTGGTCACAGCCAAAACCCACATC | + |
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Preference number: 6 (lower is better) Translates to: SMRASSSASISR*MESLVTAKTHI Trigger: GATGTGGGTTTTGGCTGTGACCAATGACTCCATGCACCGTGAGATTGAGGCTGAGCTCGACGCCCTCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS CCA 72 bp | CCATGTCTGCTTGGTCATAGGAGGATGCTCCCTCAGTaGTCTTTGCTTCTGGAGAAGGCATGGGTGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: PCLLGHRRMLPQ*SLLLEKAWVQA Trigger: AGCCTGCACCCATGCCTTCTCCAGAAGCAAAGACCACTGAGGGAGCATCCTCCTATGACCAAGCAGACATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS CCA 72 bp | TACTGGCGGGCTATGTCAGGGCCACTCGCTTCGATTTaGAAGAGCACAAAGACACATACGCCAGCCACCAGT | + |
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Preference number: 6 (lower is better) Translates to: YWRAMSGPLASI*KSTKTHTPATS Trigger: ACTGGTGGCTGGCGTATGTGTCTTTGTGCTCTTCCAAATCGAAGCGAGTGGCCCTGACATAGCCCGCCAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS TCA 72 bp | AGCATGAGTCCACACCTGGTGAAGTTGGTCTGCACCTaGACACAGTCCTTACAGTGTCTCCAGAGCACCCAT | + |
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Preference number: 6 (lower is better) Translates to: SMSPHLVKLVCT*TQSLQCLQSTH Trigger: ATGGGTGCTCTGGAGACACTGTAAGGACTGTGTTCAGGTGCAGACCAACTTCACCAGGTGTGGACTCATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS TCA 72 bp | GGTGTTGAGGCACATGCAAGTGTTGGTCCCGTTACCTaGGAGGAGATAGGGCAGGAAAAGACAGCATCTCAG | + |
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Preference number: 6 (lower is better) Translates to: GVEAHASVGPVT*EEIGQEKTASQ Trigger: CTGAGATGCTGTCTTTTCCTGCCCTATCTCCTCTCAGGTAACGGGACCAACACTTGCATGTGCCTCAACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019006.5 |
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| CDS CCA 72 bp | CGAGCTCAGCCTCAATCTCACGGTGCATGGAGTCATTaGTCACAGCCAAAACCCACATCAGCAAGTTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: RAQPQSHGAWSH*SQPKPTSASLW Trigger: CCACAAACTTGCTGATGTGGGTTTTGGCTGTGACCAATGACTCCATGCACCGTGAGATTGAGGCTGAGCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS CAA 90 bp | ATCCACAGTGTGATGTTGCAGAGGATGAGGAAGAGAGAGATCTCCTaGAGCATCCTGCGTTTCCAGTTGAGGTGGCTGAAGGAGTGGATG | + |
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Preference number: 6 (lower is better) Translates to: IHSVMLQRMRKREIS*SILRFQLRWLKEWM Trigger: CATCCACTCCTTCAGCCACCTCAACTGGAAACGCAGGATGCTCAAGGAGATCTCTCTCTTCCTCATCCTCTGCAACATCACACTGTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS CAA 72 bp | TCGAGCTCAGCCTCAATCTCACGGTGCATGGAGTCATaGGTCACAGCCAAAACCCACATCAGCAAGTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSSASISRCMES*VTAKTHISKFV Trigger: CACAAACTTGCTGATGTGGGTTTTGGCTGTGACCAATGACTCCATGCACCGTGAGATTGAGGCTGAGCTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS CAA 72 bp | GTGATGTTGCAGAGGATGAGGAAGAGAGAGATCTCCTaGAGCATCCTGCGTTTCCAGTTGAGGTGGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: VMLQRMRKREIS*SILRFQLRWLK Trigger: CTTCAGCCACCTCAACTGGAAACGCAGGATGCTCAAGGAGATCTCTCTCTTCCTCATCCTCTGCAACATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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| CDS GCA 72 bp | ATGCTTAGTCTCCATGTCTGCTTGGTCATAGGAGGATaGTCCCTCAGTGGTCTTTGCTTCTGGAGAAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: MLSLHVCLVIGG*SLSGLCFWRRH Trigger: ATGCCTTCTCCAGAAGCAAAGACCACTGAGGGAGCATCCTCCTATGACCAAGCAGACATGGAGACTAAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019006.5 ENSMUST00000106543.8 |
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