Pregenerated sensors for OTOP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050201Ensembl transcript IDs: ENSMUST00000055490.9, ENSMUST00000106544.2
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTCAGAGATGGTATTTCCTGATCCTGTCTGGTCCTAGGGGATTCTaGAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: SQRWYFLILSGPRGF*REQFPCLRLPRLQG Trigger: ACCCTGGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCTAGGACCAGACAGGATCAGGAAATACCATCTCTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| 3UTR TCA 90 bp | GGCCATGTGGCTGGAATTAGAGATAGAGTCAGAGATGGTATTTCCTaGTCCTGTCTGGTCCTAGGGGATTCTGCAGGGAACAGTTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: GHVAGIRDRVRDGIS*SCLVLGDSAGNSFP Trigger: AGGGAAACTGTTCCCTGCAGAATCCCCTAGGACCAGACAGGATCAGGAAATACCATCTCTGACTCTATCTCTAATTCCAGCCACATGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| 3UTR CCA 90 bp | CTTGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTaGCTGGAATTAGAGATAGAGTCAGAGATGGTATTTCCTGATCCT | + |
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Preference number: 1 (lower is better) Translates to: LAGLLVSSPESTQAM*LELEIESEMVFPDP Trigger: AGGATCAGGAAATACCATCTCTGACTCTATCTCTAATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCTAGGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCGTGAAAATTCTAGTCTaGGGCAGGCAGGGAGCTAGT | + |
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Preference number: 2 (lower is better) Translates to: VLGDSAGNSFPASVSRGSVKILV*GRQGAS Trigger: ACTAGCTCCCTGCCTGCCCCAGACTAGAATTTTCAC...GGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCTAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCTTGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGTGCTGGAGTTCCTCTaGTCTGTCTCTCTGTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LLAGLLVSSPESTQAMWLVLEFL*SVSLWS Trigger: GCTCCACAGAGAGACAGAGCAGAGGAACTCCAGCAC...CAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCAAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| 3UTR-3UTR GCA 90 bp | TTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATTAGAGATAGTGCTGGAGTTCCTCTaGTCTGTCTCTCTGTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LLVSSPESTQAMWLELEIVLEFL*SVSLWS Trigger: GCTCCACAGAGAGACAGAGCAGAGGAACTCCAGCAC...TATCTCTAATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| 3UTR GCA 72 bp | TCTGGTCCTAGGGGATTCTGCAGGGAACAGTTTCCCTaGCTCCGTCTCCCGAGGCTCCAGGGTCATGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: SGPRGFCREQFP*LRLPRLQGHAG Trigger: TCCTGCATGACCCTGGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCTAGGACCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| 3UTR GCA 72 bp | TGGTATTTCCTGATCCTGTCTGGTCCTAGGGGATTCTaGAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGG | + |
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Preference number: 3 (lower is better) Translates to: WYFLILSGPRGF*REQFPCLRLPR Trigger: CCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCTAGGACCAGACAGGATCAGGAAATACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| 3UTR TCA 72 bp | GCTGGAATTAGAGATAGAGTCAGAGATGGTATTTCCTaGTCCTGTCTGGTCCTAGGGGATTCTGCAGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: AGIRDRVRDGIS*SCLVLGDSAGN Trigger: GTTCCCTGCAGAATCCCCTAGGACCAGACAGGATCAGGAAATACCATCTCTGACTCTATCTCTAATTCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| 3UTR CCA 72 bp | TTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTaGCTGGAATTAGAGATAGAGTCAGAGATGGTATTT | + |
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Preference number: 3 (lower is better) Translates to: LLVSSPESTQAM*LELEIESEMVF Trigger: AAATACCATCTCTGACTCTATCTCTAATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR TCA 90 bp | GGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCAGGGTCGAGCGTGGGACAGGTTaGGCGCCCCCTGCAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GDSAGNSFPASVSRGSRVERGTG*APPAGL Trigger: GAGACCTGCAGGGGGCGCTCAACCTGTCCCACGCTC...GACCCTGGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CCA 90 bp | CTGGTCCTAGGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCGACGGTGTGTGGCCGTaGCCGTGGGTGGAGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: LVLGDSAGNSFPASVSRGDGVWP*PWVEAS Trigger: GCTCGCCTCCACCCACGGCCACGGCCACACACCGTC...GCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCTAGGACCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR TCA 90 bp | CTGGTCCTAGGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCGAGCGTGGGACAGGTTaGGCGCCCCCTGCAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LVLGDSAGNSFPASVSRGERGTG*APPAGL Trigger: GAGACCTGCAGGGGGCGCTCAACCTGTCCCACGCTC...GCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCTAGGACCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CCA 90 bp | GTCCTAGGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCCACCGACGTCGCCAGTaGCACCTGGGGGCCGAGATG | + |
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Preference number: 4 (lower is better) Translates to: VLGDSAGNSFPASVSRGSHRRRQ*HLGAEM Trigger: CATCTCGGCCCCCAGGTGCCACTGGCGACGTCGGTG...GGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCTAGGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR GCA 90 bp | CTGGTCCTAGGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCAGGTTGAGCGCCCCCTaGAGGTCTCTGGGAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LVLGDSAGNSFPASVSRGRLSAP*RSLGEP Trigger: GGGCTCTCCCAGAGACCTGCAGGGGGCGCTCAACCT...GCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCTAGGACCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CCA 90 bp | GGAGCTAGTGCCAGCCTGATTCACTTCCAGGTGCTGGAGTTCCTCTGCTCTGTCGACGGTGTGTGGCCGTaGCCGTGGGTGGAGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: GASASLIHFQVLEFLCSVDGVWP*PWVEAS Trigger: GCTCGCCTCCACCCACGGCCACGGCCACACACCGTC...GACAGAGCAGAGGAACTCCAGCACCTGGAAGTGAATCAGGCTGGCACTAGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CCA 90 bp | ATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCAGGGTCATGCCCCCCTGCAGGTCTCTaGGAGAGCCCACCACCACAG | + |
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Preference number: 4 (lower is better) Translates to: ILQGTVSLPPSPEAPGSCPPAGL*ESPPPQ Trigger: CTGTGGTGGTGGGCTCTCCCAGAGACCTGCAGGGGG...GCATGACCCTGGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAAT 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR TCA 90 bp | CTGGTCCTAGGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCGCAGCATCATGGTGGTaGGCAGAGCGAACACGTCCG | + |
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Preference number: 4 (lower is better) Translates to: LVLGDSAGNSFPASVSRGAASWW*AERTRP Trigger: CGGACGTGTTCGCTCTGCTCACCACCATGATGCTGC...GCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCTAGGACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR TCA 90 bp | AGGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCAGGGTAAGGTAGGCAGATGTTaGCGATGGCCGCCCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: RGFCREQFPCLRLPRLQGKVGRC*RWPPRG Trigger: CCCTCTGGGCGGCCATCGTCAACATCTGCCTACCTT...ACCCTGGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CCA 90 bp | CTGGTCCTAGGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCCACCTCGGAGCCAGATaGGACCAGCATGAGCATCCC | + |
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Preference number: 4 (lower is better) Translates to: LVLGDSAGNSFPASVSRGHLGAR*DQHEHP Trigger: GGGATGCTCATGCTGGTCCCATCTGGCTCCGAGGTG...GCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCTAGGACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR TCA 90 bp | CTGGTCCTAGGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTTTCTAGGTTGGGAATaGCCAGCCTGGGGGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LVLGDSAGNSFPASVSRGFLGWE*PAWGWV Trigger: CACCCACCCCCAGGCTGGTCATTCCCAACCTAGAAA...GCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCTAGGACCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR GCA 90 bp | GGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCAGGGTCCTCATCCACTACGGCTaGCATCCAGATGGCGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: GDSAGNSFPASVSRGSRVLIHYG*HPDGEV Trigger: AACCTCGCCATCTGGATGGCAGCCGTAGTGGATGAG...GACCCTGGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR GCA 90 bp | AGGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCAGGGTGGGTGTGGCTGGTGTTaGCATGGGAACCACTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: RGFCREQFPCLRLPRLQGGCGWC*HGNHCR Trigger: CCTACAGTGGTTCCCATGGCAACACCAGCCACACCC...ACCCTGGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CCA 90 bp | AGGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCAGGGTGGAAGATCTGACAGATaGCTGTGCTGCAGAGGCACG | + |
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Preference number: 4 (lower is better) Translates to: RGFCREQFPCLRLPRLQGGRSDR*LCCRGT Trigger: CGTGCCTCTGCAGCACAGCCATCTGTCAGATCTTCC...ACCCTGGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR TCA 90 bp | ATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCAGGGTCATGCCCTTGCTGGAAGATCTaGCAGATGGCTGTGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: ILQGTVSLPPSPEAPGSCPCWKI*QMAVLQ Trigger: CTGCAGCACAGCCATCTGTCAGATCTTCCAGCAAGG...GCATGACCCTGGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR TCA 90 bp | GGAGCTAGTGCCAGCCTGATTCACTTCCAGGTGCTGGAGTTCCTCTGCTCTGTCCGTGTCGGGTTCTTATaGTGGTCCATGGCCCGACGG | + |
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Preference number: 4 (lower is better) Translates to: GASASLIHFQVLEFLCSVRVGFL*WSMARR Trigger: CCGTCGGGCCATGGACCATCATAAGAACCCGACACG...GACAGAGCAGAGGAACTCCAGCACCTGGAAGTGAATCAGGCTGGCACTAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR GCA 90 bp | GTGAAAATTCTAGTCTGGGGCAGGCAGGGAGCTAGTGCCAGCCTGATTCACTTCAGGTTGAGCGCCCCCTaGAGGTCTCTGGGAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: VKILVWGRQGASASLIHFRLSAP*RSLGEP Trigger: GGGCTCTCCCAGAGACCTGCAGGGGGCGCTCAACCT...GAAGTGAATCAGGCTGGCACTAGCTCCCTGCCTGCCCCAGACTAGAATTTTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CCA 90 bp | GGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCAGGGTCAGGTCCAGGTGGGTATaGATACAGTCTTTAGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: GDSAGNSFPASVSRGSRVRSRWV*IQSLAE Trigger: CTCCGCTAAAGACTGTATCCATACCCACCTGGACCT...GACCCTGGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CCA 90 bp | ATTCTAGTCTGGGGCAGGCAGGGAGCTAGTGCCAGCCTGATTCACTTCCAGGTGCTTGGCAGGGCTCCTTaGGGGGCATTTCACGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: ILVWGRQGASASLIHFQVLGRAP*GAFHEA Trigger: AGCCTCGTGAAATGCCCCCCAAGGAGCCCTGCCAAG...CACCTGGAAGTGAATCAGGCTGGCACTAGCTCCCTGCCTGCCCCAGACTAGAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CCA 90 bp | CTGGTCCTAGGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCATGACAAACACGGCTTaGATGATGGGGTGCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: LVLGDSAGNSFPASVSRGMTNTA*MMGCRI Trigger: GATCCTGCACCCCATCATCCAAGCCGTGTTTGTCAT...GCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCTAGGACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CCA 90 bp | TGCTTGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGCGGCTGCCATCCAGATaGCGAGGTTGGTGGCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: CLQVYWSHLQRVHRPCGWRLPSR*RGWWRG Trigger: CCCTCGCCACCAACCTCGCCATCTGGATGGCAGCCG...CCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR TCA 90 bp | TTAGTGAAAATTCTAGTCTGGGGCAGGCAGGGAGCTAGTGCCAGCCTGATTCACCGAGCAGCAGCACGTTaGCAGCCAACAGCACCGACA | + |
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Preference number: 4 (lower is better) Translates to: LVKILVWGRQGASASLIHRAAAR*QPTAPT Trigger: TGTCGGTGCTGTTGGCTGTCAACGTGCTGCTGCTCG...GTGAATCAGGCTGGCACTAGCTCCCTGCCTGCCCCAGACTAGAATTTTCACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR TCA 90 bp | TTAGTGAAAATTCTAGTCTGGGGCAGGCAGGGAGCTAGTGCCAGCCTGATTCACGCAGCATCATGGTGGTaGGCAGAGCGAACACGTCCG | + |
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Preference number: 4 (lower is better) Translates to: LVKILVWGRQGASASLIHAASWW*AERTRP Trigger: CGGACGTGTTCGCTCTGCTCACCACCATGATGCTGC...GTGAATCAGGCTGGCACTAGCTCCCTGCCTGCCCCAGACTAGAATTTTCACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR TCA 90 bp | TGCTTGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGGCTTTGAGTCAGGGTTaGGGCGGGTGTGGCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: CLQVYWSHLQRVHRPCGWALSQG*GGCGWC Trigger: ACACCAGCCACACCCGCCTCAACCCTGACTCAAAGC...CCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR TCA 90 bp | ATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCAGGGTCATGCCCACATTCTTCCACATaGCATACAGCATGGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: ILQGTVSLPPSPEAPGSCPHSST*HTAWWK Trigger: CTTCCACCATGCTGTATGTCATGTGGAAGAATGTGG...GCATGACCCTGGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CCA 90 bp | TGCTTGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGCACCTCGGAGCCAGATaGGACCAGCATGAGCATCCC | + |
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Preference number: 4 (lower is better) Translates to: CLQVYWSHLQRVHRPCGWHLGAR*DQHEHP Trigger: GGGATGCTCATGCTGGTCCCATCTGGCTCCGAGGTG...CCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CCA 90 bp | ATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCAGGGTCATGCTCTTATGATGGTCCATaGCCCGACGGTCAAAACGAT | + |
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Preference number: 4 (lower is better) Translates to: ILQGTVSLPPSPEAPGSCSYDGP*PDGQND Trigger: ATCGTTTTGACCGTCGGGCCATGGACCATCATAAGA...GCATGACCCTGGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CCA 90 bp | ATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATTAGAGATAGAGTCAGAGATCACCGACGTCGCCAGTaGCACCTGGGGGCCGAGATG | + |
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Preference number: 4 (lower is better) Translates to: ISREYTGHVAGIRDRVRDHRRRQ*HLGAEM Trigger: CATCTCGGCCCCCAGGTGCCACTGGCGACGTCGGTG...ATCTCTGACTCTATCTCTAATTCCAGCCACATGGCCTGTGTACTCTCTGGAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR TCA 90 bp | GTGAAAATTCTAGTCTGGGGCAGGCAGGGAGCTAGTGCCAGCCTGATTCACTTCCCTTGCTGGAAGATCTaGCAGATGGCTGTGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VKILVWGRQGASASLIHFPCWKI*QMAVLQ Trigger: CTGCAGCACAGCCATCTGTCAGATCTTCCAGCAAGG...GAAGTGAATCAGGCTGGCACTAGCTCCCTGCCTGCCCCAGACTAGAATTTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR TCA 90 bp | TTGCTTGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGAAGGTAGGCAGATGTTaGCGATGGCCGCCCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLAGLLVSSPESTQAMWLKVGRC*RWPPRG Trigger: CCCTCTGGGCGGCCATCGTCAACATCTGCCTACCTT...CAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCAAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CCA 90 bp | GGAGCTAGTGCCAGCCTGATTCACTTCCAGGTGCTGGAGTTCCTCTGCTCTGTCAGGTCCAGGTGGGTATaGATACAGTCTTTAGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: GASASLIHFQVLEFLCSVRSRWV*IQSLAE Trigger: CTCCGCTAAAGACTGTATCCATACCCACCTGGACCT...GACAGAGCAGAGGAACTCCAGCACCTGGAAGTGAATCAGGCTGGCACTAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CCA 90 bp | TGGCTGGAATTAGAGATAGAGTCAGAGATGGTATTTCCTGATCCTGTCTGGTCCCGGCTGCCATCCAGATaGCGAGGTTGGTGGCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: WLELEIESEMVFPDPVWSRLPSR*RGWWRG Trigger: CCCTCGCCACCAACCTCGCCATCTGGATGGCAGCCG...GGACCAGACAGGATCAGGAAATACCATCTCTGACTCTATCTCTAATTCCAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR TCA 90 bp | AGATGGTATTTCCTGATCCTGTCTGGTCCTAGGGGATTCTGCAGGGAACAGTTTCGAGCAGCAGCACGTTaGCAGCCAACAGCACCGACA | + |
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Preference number: 4 (lower is better) Translates to: RWYFLILSGPRGFCREQFRAAAR*QPTAPT Trigger: TGTCGGTGCTGTTGGCTGTCAACGTGCTGCTGCTCG...AAACTGTTCCCTGCAGAATCCCCTAGGACCAGACAGGATCAGGAAATACCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR TCA 90 bp | TTGCTTGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGTGGGGTGCAGGATCTTaGTGGCCGACTGGCACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLAGLLVSSPESTQAMWLWGAGS*WPTGTQ Trigger: TTGAGTGCCAGTCGGCCATCAAGATCCTGCACCCCA...CAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCAAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR TCA 90 bp | TGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATTGCTTTGAGTCAGGGTTaGGGCGGGTGTGGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CRFIGLISREYTGHVAGIALSQG*GGCGWC Trigger: ACACCAGCCACACCCGCCTCAACCCTGACTCAAAGC...AATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR TCA 90 bp | TGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATTCGTGTCGGGTTCTTATaGTGGTCCATGGCCCGACGG | + |
|
Preference number: 4 (lower is better) Translates to: CRFIGLISREYTGHVAGIRVGFL*WSMARR Trigger: CCGTCGGGCCATGGACCATCATAAGAACCCGACACG...AATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR TCA 90 bp | GTGAAAATTCTAGTCTGGGGCAGGCAGGGAGCTAGTGCCAGCCTGATTCACTTCTTCTGGAAGGTGTGCTaGGCGATCATGAGTAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VKILVWGRQGASASLIHFFWKVC*AIMSRA Trigger: CGCTCTACTCATGATCGCTCAGCACACCTTCCAGAA...GAAGTGAATCAGGCTGGCACTAGCTCCCTGCCTGCCCCAGACTAGAATTTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR CCA 90 bp | TTAGTGAAAATTCTAGTCTGGGGCAGGCAGGGAGCTAGTGCCAGCCTGATTCACGGAAGATCTGACAGATaGCTGTGCTGCAGAGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LVKILVWGRQGASASLIHGRSDR*LCCRGT Trigger: CGTGCCTCTGCAGCACAGCCATCTGTCAGATCTTCC...GTGAATCAGGCTGGCACTAGCTCCCTGCCTGCCCCAGACTAGAATTTTCACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR TCA 90 bp | AGATGGTATTTCCTGATCCTGTCTGGTCCTAGGGGATTCTGCAGGGAACAGTTTTTTCTAGGTTGGGAATaGCCAGCCTGGGGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RWYFLILSGPRGFCREQFFLGWE*PAWGWV Trigger: CACCCACCCCCAGGCTGGTCATTCCCAACCTAGAAA...AAACTGTTCCCTGCAGAATCCCCTAGGACCAGACAGGATCAGGAAATACCATCT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTGGAATTAGAGATAGAGTCAGAGATGGTATTTCCTGATCCTGTCTGGTCCCTTGGCAGGGCTCCTTaGGGGGCATTTCACGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WLELEIESEMVFPDPVWSLGRAP*GAFHEA Trigger: AGCCTCGTGAAATGCCCCCCAAGGAGCCCTGCCAAG...GGACCAGACAGGATCAGGAAATACCATCTCTGACTCTATCTCTAATTCCAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR CCA 90 bp | TGGTATTTCCTGATCCTGTCTGGTCCTAGGGGATTCTGCAGGGAACAGTTTCCCAGACCTCCAGTAGACTaGAGACAGCGTGCATTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: WYFLILSGPRGFCREQFPRPPVD*RQRAFG Trigger: ACCGAATGCACGCTGTCTCCAGTCTACTGGAGGTCT...GGGAAACTGTTCCCTGCAGAATCCCCTAGGACCAGACAGGATCAGGAAATACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR GCA 90 bp | TCATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATTAGAGATAGAGTCAGAGGCTTGGATGATGGGGTaGAGGATCTTGATGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSPESTQAMWLELEIESEAWMMG*RILMAD Trigger: GTCGGCCATCAAGATCCTGCACCCCATCATCCAAGC...CTCTGACTCTATCTCTAATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR GCA 90 bp | TCATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATTAGAGATAGAGTCAGAGCTCATCCACTACGGCTaGCATCCAGATGGCGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSPESTQAMWLELEIESELIHYG*HPDGEV Trigger: AACCTCGCCATCTGGATGGCAGCCGTAGTGGATGAG...CTCTGACTCTATCTCTAATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR TCA 90 bp | TCATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATTAGAGATAGAGTCAGAGGGACCTCATAAAGGATaGAGACAGCCAACCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPESTQAMWLELEIESEGPHKG*RQPTPP Trigger: TGGTGGGGTTGGCTGTCTTCATCCTTTATGAGGTCC...CTCTGACTCTATCTCTAATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTGGAATTAGAGATAGAGTCAGAGATGGTATTTCCTGATCCTGTCTGGTCCGCTTGGATGATGGGGTaGAGGATCTTGATGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: WLELEIESEMVFPDPVWSAWMMG*RILMAD Trigger: GTCGGCCATCAAGATCCTGCACCCCATCATCCAAGC...GGACCAGACAGGATCAGGAAATACCATCTCTGACTCTATCTCTAATTCCAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR TCA 90 bp | ATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATTAGAGATAGAGTCAGAGATGGACCTCATAAAGGATaGAGACAGCCAACCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ISREYTGHVAGIRDRVRDGPHKG*RQPTPP Trigger: TGGTGGGGTTGGCTGTCTTCATCCTTTATGAGGTCC...ATCTCTGACTCTATCTCTAATTCCAGCCACATGGCCTGTGTACTCTCTGGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTTGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGAAAACGATAGATGACTaGACCACTCAGGCTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLAGLLVSSPESTQAMWLKTIDD*TTQADQ Trigger: CTGGTCAGCCTGAGTGGTTCAGTCATCTATCGTTTT...CAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR TCA 90 bp | ATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATTAGAGATAGAGTCAGAGATTTCTGGAAGGTGTGCTaGGCGATCATGAGTAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ISREYTGHVAGIRDRVRDFWKVC*AIMSRA Trigger: CGCTCTACTCATGATCGCTCAGCACACCTTCCAGAA...ATCTCTGACTCTATCTCTAATTCCAGCCACATGGCCTGTGTACTCTCTGGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR TCA 90 bp | TTGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATATAGCCACTGCTTCCTaGGGACTTTCTAGGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQVYWSHLQRVHRPCGWNIATAS*GLSRLG Trigger: TCCCAACCTAGAAAGTCCTCAGGAAGCAGTGGCTAT...ATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR TCA 90 bp | TCATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATTAGAGATAGAGTCAGAGATAGCCACTGCTTCCTaGGGACTTTCTAGGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSPESTQAMWLELEIESEIATAS*GLSRLG Trigger: TCCCAACCTAGAAAGTCCTCAGGAAGCAGTGGCTAT...CTCTGACTCTATCTCTAATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGGCATTCGGTAGAAGATaGCAAAAGGTAGGCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: CLQVYWSHLQRVHRPCGWAFGRR*QKVGRC Trigger: ACATCTGCCTACCTTTTGGCATCTTCTACCGAATGC...CCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTTGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGATCTTGATGGCCGACTaGCACTCAAAGAAACTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLAGLLVSSPESTQAMWLILMAD*HSKKLE Trigger: TTCCAGTTTCTTTGAGTGCCAGTCGGCCATCAAGAT...CAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCAAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR TCA 90 bp | TTGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATGGCTGTACTCGATGTTaGAGGGATACAGGTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LQVYWSHLQRVHRPCGWNGCTRC*RDTGRN Trigger: ATTTCTACCTGTATCCCTTCAACATCGAGTACAGCC...ATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTGGAATTAGAGATAGAGTCAGAGATGGTATTTCCTGATCCTGTCTGGTCCCCACATTCTTCCACATaGCATACAGCATGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WLELEIESEMVFPDPVWSPHSST*HTAWWK Trigger: CTTCCACCATGCTGTATGTCATGTGGAAGAATGTGG...GGACCAGACAGGATCAGGAAATACCATCTCTGACTCTATCTCTAATTCCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR TCA 90 bp | ATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATTAGAGATAGAGTCAGAGATAAAACGATAGATGACTaGACCACTCAGGCTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISREYTGHVAGIRDRVRDKTIDD*TTQADQ Trigger: CTGGTCAGCCTGAGTGGTTCAGTCATCTATCGTTTT...ATCTCTGACTCTATCTCTAATTCCAGCCACATGGCCTGTGTACTCTCTGGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR GCA 90 bp | AGATGGTATTTCCTGATCCTGTCTGGTCCTAGGGGATTCTGCAGGGAACAGTTTGCATTCGGTAGAAGATaGCAAAAGGTAGGCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: RWYFLILSGPRGFCREQFAFGRR*QKVGRC Trigger: ACATCTGCCTACCTTTTGGCATCTTCTACCGAATGC...AAACTGTTCCCTGCAGAATCCCCTAGGACCAGACAGGATCAGGAAATACCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR CCA 90 bp | AGATGGTATTTCCTGATCCTGTCTGGTCCTAGGGGATTCTGCAGGGAACAGTTTATCTTGATGGCCGACTaGCACTCAAAGAAACTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RWYFLILSGPRGFCREQFILMAD*HSKKLE Trigger: TTCCAGTTTCTTTGAGTGCCAGTCGGCCATCAAGAT...AAACTGTTCCCTGCAGAATCCCCTAGGACCAGACAGGATCAGGAAATACCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTGGAATTAGAGATAGAGTCAGAGATGGTATTTCCTGATCCTGTCTGGTCCTCTTATGATGGTCCATaGCCCGACGGTCAAAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: WLELEIESEMVFPDPVWSSYDGP*PDGQND Trigger: ATCGTTTTGACCGTCGGGCCATGGACCATCATAAGA...GGACCAGACAGGATCAGGAAATACCATCTCTGACTCTATCTCTAATTCCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS TCA 90 bp | GCAGGCCCAAGACTGGGCCGGCAAAGAAGGTCTCCCGGAACAGGCTaGCCCTGGACGGTGTGTGGCCGTGGCCGTGGGTGGAGGCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGPRLGRQRRSPGTG*PWTVCGRGRGWRRA Trigger: TGCTCGCCTCCACCCACGGCCACGGCCACACACCGTCCAGGGTCAGCCTGTTCCGGGAGACCTTCTTTGCCGGCCCAGTCTTGGGCCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS CCA 90 bp | CCGGCAAAGAAGGTCTCCCGGAACAGGCTGACCCTGGACGGTGTGTaGCCGTGGCCGTGGGTGGAGGCGAGCAGCCTTCCCACATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PAKKVSRNRLTLDGV*PWPWVEASSLPTFF Trigger: GAAGAATGTGGGAAGGCTGCTCGCCTCCACCCACGGCCACGGCCACACACCGTCCAGGGTCAGCCTGTTCCGGGAGACCTTCTTTGCCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS CCA 90 bp | GTCTCCCGGAACAGGCTGACCCTGGACGGTGTGTGGCCGTGGCCGTaGGTGGAGGCGAGCAGCCTTCCCACATTCTTCCACATGACATAC | + |
|
Preference number: 5 (lower is better) Translates to: VSRNRLTLDGVWPWP*VEASSLPTFFHMTY Trigger: GTATGTCATGTGGAAGAATGTGGGAAGGCTGCTCGCCTCCACCCACGGCCACGGCCACACACCGTCCAGGGTCAGCCTGTTCCGGGAGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR CAA 90 bp | AGGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCAGGGTTCCACCTCCACGGTATaGCTGAAGTGCGGGCGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RGFCREQFPCLRLPRLQGSTSTV*LKCGRA Trigger: CGCTCGCCCGCACTTCAGCAATACCGTGGAGGTGGA...ACCCTGGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTCCTAGGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCACCTCCACGGTATaGCTGAAGTGCGGGCGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LVLGDSAGNSFPASVSRGSTSTV*LKCGRA Trigger: CGCTCGCCCGCACTTCAGCAATACCGTGGAGGTGGA...GCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCTAGGACCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS TCA 90 bp | CGTCGCCAGTGGCACCTGGGGGCCGAGATGATAGCCACTGCTTCCTaGGGACTTTCTAGGTTGGGAATGACCAGCCTGGGGGTGGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RRQWHLGAEMIATAS*GLSRLGMTSLGVGG Trigger: TCCACCCACCCCCAGGCTGGTCATTCCCAACCTAGAAAGTCCTCAGGAAGCAGTGGCTATCATCTCGGCCCCCAGGTGCCACTGGCGACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS GCA 90 bp | CAGCATGAGCATCCCGGTAAGGCACCGCGTCTGGACAGCGAGCGGTaGGGAGGAGGTAGAAGACTATCCATAGCGCGGCCAGCAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: QHEHPGKAPRLDSER*GGGRRLSIARPAAS Trigger: TGATGCTGCTGGCCGCGCTATGGATAGTCTTCTACCTCCTCCGCACCGCTCGCTGTCCAGACGCGGTGCCTTACCGGGATGCTCATGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR CAA 90 bp | GGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCAGGGTCAAAGGTAGGCAGATGTaGACGATGGCCGCCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GDSAGNSFPASVSRGSRVKGRQM*TMAAQR Trigger: CCTCTGGGCGGCCATCGTCAACATCTGCCTACCTTT...GACCCTGGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR CAA 90 bp | GTCCTAGGGGATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCATGGGGTGCAGGATCTaGATGGCCGACTGGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: VLGDSAGNSFPASVSRGSMGCRI*MADWHS Trigger: TGAGTGCCAGTCGGCCATCAAGATCCTGCACCCCAT...GGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAATCCCCTAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCTAGTGCCAGCCTGATTCACTTCCAGGTGCTGGAGTTCCTCTGCTCTGTCGCGAGCAGCAGCACGTaGACAGCCAACAGCACCGAC | + |
|
Preference number: 5 (lower is better) Translates to: GASASLIHFQVLEFLCSVASSST*TANSTD Trigger: GTCGGTGCTGTTGGCTGTCAACGTGCTGCTGCTCGC...GACAGAGCAGAGGAACTCCAGCACCTGGAAGTGAATCAGGCTGGCACTAGCTCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCTAGTGCCAGCCTGATTCACTTCCAGGTGCTGGAGTTCCTCTGCTCTGTCCGCTTTGAGTCAGGGTaGAGGCGGGTGTGGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GASASLIHFQVLEFLCSVRFESG*RRVWLV Trigger: CACCAGCCACACCCGCCTCAACCCTGACTCAAAGCG...GACAGAGCAGAGGAACTCCAGCACCTGGAAGTGAATCAGGCTGGCACTAGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS TCA 90 bp | ACGGGTCTTCTTCAGCTGCACCTCCTGCACGCTTTGAGTCAGGGTTaGGGCGGGTGTGGCTGGTGTTGCCATGGGAACCACTGTAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TGLLQLHLLHALSQG*GGCGWCCHGNHCRS Trigger: ACTCCTACAGTGGTTCCCATGGCAACACCAGCCACACCCGCCTCAACCCTGACTCAAAGCGTGCAGGAGGTGCAGCTGAAGAAGACCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS TCA 90 bp | GTCGGGTGTGGCCTCTCTCTCCACTCACCTGGACCTCATAAAGGATaGAGACAGCCAACCCCACCACAAAGAGGAGCAGGCCCAAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: VGCGLSLHSPGPHKG*RQPTPPQRGAGPRL Trigger: CAGTCTTGGGCCTGCTCCTCTTTGTGGTGGGGTTGGCTGTCTTCATCCTTTATGAGGTCCAGGTGAGTGGAGAGAGAGGCCACACCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAAATTCTAGTCTGGGGCAGGCAGGGAGCTAGTGCCAGCCTGATTCACTTCGCGAGCAGCAGCACGTaGACAGCCAACAGCACCGAC | + |
|
Preference number: 5 (lower is better) Translates to: VKILVWGRQGASASLIHFASSST*TANSTD Trigger: GTCGGTGCTGTTGGCTGTCAACGTGCTGCTGCTCGC...GAAGTGAATCAGGCTGGCACTAGCTCCCTGCCTGCCCCAGACTAGAATTTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCTAGTGCCAGCCTGATTCACTTCCAGGTGCTGGAGTTCCTCTGCTCTGTCATCCAGATGGCGAGGTaGGTGGCGAGGGTGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: GASASLIHFQVLEFLCSVIQMAR*VARVNM Trigger: CATGTTCACCCTCGCCACCAACCTCGCCATCTGGAT...GACAGAGCAGAGGAACTCCAGCACCTGGAAGTGAATCAGGCTGGCACTAGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAAATTCTAGTCTGGGGCAGGCAGGGAGCTAGTGCCAGCCTGATTCACTTCGTAGGAGATAGCGTATaGGCCCAGGGCGGCGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VKILVWGRQGASASLIHFVGDSV*AQGGAH Trigger: ATGGGCGCCGCCCTGGGCCAATACGCTATCTCCTAC...GAAGTGAATCAGGCTGGCACTAGCTCCCTGCCTGCCCCAGACTAGAATTTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS GCA 90 bp | ACAGGTAGAAATAGCCTTGCTGGAAGATCTGACAGATGGCTGTGCTaGAGAGGCACGGGTCTTCTTCAGCTGCACCTCCTGCACGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGRNSLAGRSDRWLC*RGTGLLQLHLLHAL Trigger: CAAAGCGTGCAGGAGGTGCAGCTGAAGAAGACCCGTGCCTCTGCAGCACAGCCATCTGTCAGATCTTCCAGCAAGGCTATTTCTACCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
||
| CDS GCA 90 bp | GATACAGGTAGAAATAGCCTTGCTGGAAGATCTGACAGATGGCTGTaGTGCAGAGGCACGGGTCTTCTTCAGCTGCACCTCCTGCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: DTGRNSLAGRSDRWL*CRGTGLLQLHLLHA Trigger: AGCGTGCAGGAGGTGCAGCTGAAGAAGACCCGTGCCTCTGCAGCACAGCCATCTGTCAGATCTTCCAGCAAGGCTATTTCTACCTGTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CAA 90 bp | TGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATTCGCTTTGAGTCAGGGTaGAGGCGGGTGTGGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: CRFIGLISREYTGHVAGIRFESG*RRVWLV Trigger: CACCAGCCACACCCGCCTCAACCCTGACTCAAAGCG...AATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CAA 90 bp | ATTCTGCAGGGAACAGTTTCCCTGCCTCCGTCTCCCGAGGCTCCAGGGTCATGCCAGGTAGAAATAGCCTaGCTGGAAGATCTGACAGAT | + |
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Preference number: 5 (lower is better) Translates to: ILQGTVSLPPSPEAPGSCQVEIA*LEDLTD Trigger: ATCTGTCAGATCTTCCAGCAAGGCTATTTCTACCTG...GCATGACCCTGGAGCCTCGGGAGACGGAGGCAGGGAAACTGTTCCCTGCAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CAA 90 bp | TGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATTGTAGGAGATAGCGTATaGGCCCAGGGCGGCGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: CRFIGLISREYTGHVAGIVGDSV*AQGGAH Trigger: ATGGGCGCCGCCCTGGGCCAATACGCTATCTCCTAC...AATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CAA 90 bp | TGGCTGGAATTAGAGATAGAGTCAGAGATGGTATTTCCTGATCCTGTCTGGTCCTACACCGCCACCTTGTaGAAGGCACCGCCGCTGATG | + |
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Preference number: 5 (lower is better) Translates to: WLELEIESEMVFPDPVWSYTATL*KAPPLM Trigger: CATCAGCGGCGGTGCCTTCAACAAGGTGGCGGTGTA...GGACCAGACAGGATCAGGAAATACCATCTCTGACTCTATCTCTAATTCCAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CAA 90 bp | TGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATTATCCAGATGGCGAGGTaGGTGGCGAGGGTGAACATG | + |
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Preference number: 5 (lower is better) Translates to: CRFIGLISREYTGHVAGIIQMAR*VARVNM Trigger: CATGTTCACCCTCGCCACCAACCTCGCCATCTGGAT...AATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CAA 90 bp | TTGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATAAAGGTAGGCAGATGTaGACGATGGCCGCCCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: LQVYWSHLQRVHRPCGWNKGRQM*TMAAQR Trigger: CCTCTGGGCGGCCATCGTCAACATCTGCCTACCTTT...ATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS TCA 90 bp | GTTCTTATGATGGTCCATGGCCCGACGGTCAAAACGATAGATGACTaGACCACTCAGGCTGACCAGAGTCATGAGCCCCAGACAGACAAT | + |
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Preference number: 5 (lower is better) Translates to: VLMMVHGPTVKTIDD*TTQADQSHEPQTDN Trigger: ATTGTCTGTCTGGGGCTCATGACTCTGGTCAGCCTGAGTGGTTCAGTCATCTATCGTTTTGACCGTCGGGCCATGGACCATCATAAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CAA 90 bp | TTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATTAGAGATATACACCGCCACCTTGTaGAAGGCACCGCCGCTGATG | + |
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Preference number: 5 (lower is better) Translates to: LLVSSPESTQAMWLELEIYTATL*KAPPLM Trigger: CATCAGCGGCGGTGCCTTCAACAAGGTGGCGGTGTA...TATCTCTAATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CAA 90 bp | TTAGTGAAAATTCTAGTCTGGGGCAGGCAGGGAGCTAGTGCCAGCCTGATTCACAATGACAAACACGGCTaGGATGATGGGGTGCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: LVKILVWGRQGASASLIHNDKHG*DDGVQD Trigger: ATCCTGCACCCCATCATCCAAGCCGTGTTTGTCATT...GTGAATCAGGCTGGCACTAGCTCCCTGCCTGCCCCAGACTAGAATTTTCACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CAA 90 bp | TTGCTTGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGAATGACAAACACGGCTaGGATGATGGGGTGCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: LLAGLLVSSPESTQAMWLNDKHG*DDGVQD Trigger: ATCCTGCACCCCATCATCCAAGCCGTGTTTGTCATT...CAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCAAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS-3UTR CAA 90 bp | TTGCAGGTTTATTGGTCTCATCTCCAGAGAGTACACAGGCCATGTGGCTGGAATCAGGTAGAAATAGCCTaGCTGGAAGATCTGACAGAT | + |
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Preference number: 5 (lower is better) Translates to: LQVYWSHLQRVHRPCGWNQVEIA*LEDLTD Trigger: ATCTGTCAGATCTTCCAGCAAGGCTATTTCTACCTG...ATTCCAGCCACATGGCCTGTGTACTCTCTGGAGATGAGACCAATAAACCTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CAA 72 bp | CCGCCGCTGATGAGCGTGCAGGCGAGCAGCAGCACGTaGACAGCCAACAGCACCGACAGCAGGCGGCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: PPLMSVQASSST*TANSTDSRRPP Trigger: GGGCGGCCGCCTGCTGTCGGTGCTGTTGGCTGTCAACGTGCTGCTGCTCGCCTGCACGCTCATCAGCGGCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CCA 72 bp | TCCCGGAACAGGCTGACCCTGGACGGTGTGTGGCCGTaGCCGTGGGTGGAGGCGAGCAGCCTTCCCACATTC | + |
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Preference number: 6 (lower is better) Translates to: SRNRLTLDGVWP*PWVEASSLPTF Trigger: GAATGTGGGAAGGCTGCTCGCCTCCACCCACGGCCACGGCCACACACCGTCCAGGGTCAGCCTGTTCCGGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CCA 72 bp | AACAGGCTGACCCTGGACGGTGTGTGGCCGTGGCCGTaGGTGGAGGCGAGCAGCCTTCCCACATTCTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: NRLTLDGVWPWP*VEASSLPTFFH Trigger: GTGGAAGAATGTGGGAAGGCTGCTCGCCTCCACCCACGGCCACGGCCACACACCGTCCAGGGTCAGCCTGTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CAA 90 bp | TTGAAGGCACCGCCGCTGATGAGCGTGCAGGCGAGCAGCAGCACGTaGACAGCCAACAGCACCGACAGCAGGCGGCCGCCCTTTTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LKAPPLMSVQASSST*TANSTDSRRPPFFH Trigger: GTGGAAAAAGGGCGGCCGCCTGCTGTCGGTGCTGTTGGCTGTCAACGTGCTGCTGCTCGCCTGCACGCTCATCAGCGGCGGTGCCTTCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS GCA 72 bp | CATCCCGGTAAGGCACCGCGTCTGGACAGCGAGCGGTaGGGAGGAGGTAGAAGACTATCCATAGCGCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: HPGKAPRLDSER*GGGRRLSIARP Trigger: TGGCCGCGCTATGGATAGTCTTCTACCTCCTCCGCACCGCTCGCTGTCCAGACGCGGTGCCTTACCGGGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CAA 90 bp | GTGGTGAGCAGAGCGAACACGTCCGTGTCATACACCGCCACCTTGTaGAAGGCACCGCCGCTGATGAGCGTGCAGGCGAGCAGCAGCACG | + |
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Preference number: 6 (lower is better) Translates to: VVSRANTSVSYTATL*KAPPLMSVQASSST Trigger: CGTGCTGCTGCTCGCCTGCACGCTCATCAGCGGCGGTGCCTTCAACAAGGTGGCGGTGTATGACACGGACGTGTTCGCTCTGCTCACCAC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CAA 90 bp | ATGGTGGTGAGCAGAGCGAACACGTCCGTGTCATACACCGCCACCTaGTTGAAGGCACCGCCGCTGATGAGCGTGCAGGCGAGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: MVVSRANTSVSYTAT*LKAPPLMSVQASSS Trigger: GCTGCTGCTCGCCTGCACGCTCATCAGCGGCGGTGCCTTCAACAAGGTGGCGGTGTATGACACGGACGTGTTCGCTCTGCTCACCACCAT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS TCA 72 bp | GCACGGGTCTTCTTCAGCTGCACCTCCTGCACGCTTTaGGTCAGGGTTGAGGCGGGTGTGGCTGGTGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: ARVFFSCTSCTL*VRVEAGVAGVA Trigger: GGCAACACCAGCCACACCCGCCTCAACCCTGACTCAAAGCGTGCAGGAGGTGCAGCTGAAGAAGACCCGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CCA 72 bp | GGGACCAGCATGAGCATCCCGGTAAGGCACCGCGTCTaGACAGCGAGCGGTGCGGAGGAGGTAGAAGACTAT | + |
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Preference number: 6 (lower is better) Translates to: GTSMSIPVRHRV*TASGAEEVEDY Trigger: ATAGTCTTCTACCTCCTCCGCACCGCTCGCTGTCCAGACGCGGTGCCTTACCGGGATGCTCATGCTGGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CCA 72 bp | AGCCAACCCCACCACAAAGAGGAGCAGGCCCAAGACTaGGCCGGCAAAGAAGGTCTCCCGGAACAGGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SQPHHKEEQAQD*AGKEGLPEQAD Trigger: GTCAGCCTGTTCCGGGAGACCTTCTTTGCCGGCCCAGTCTTGGGCCTGCTCCTCTTTGTGGTGGGGTTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CAA 72 bp | AGAGCGAACACGTCCGTGTCATACACCGCCACCTTGTaGAAGGCACCGCCGCTGATGAGCGTGCAGGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: RANTSVSYTATL*KAPPLMSVQAS Trigger: GCTCGCCTGCACGCTCATCAGCGGCGGTGCCTTCAACAAGGTGGCGGTGTATGACACGGACGTGTTCGCTCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CAA 72 bp | AGCAGAGCGAACACGTCCGTGTCATACACCGCCACCTaGTTGAAGGCACCGCCGCTGATGAGCGTGCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: SRANTSVSYTAT*LKAPPLMSVQA Trigger: CGCCTGCACGCTCATCAGCGGCGGTGCCTTCAACAAGGTGGCGGTGTATGACACGGACGTGTTCGCTCTGCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CAA 72 bp | GACTCATCCACTACGGCTGCCATCCAGATGGCGAGGTaGGTGGCGAGGGTGAACATGAGCCCACACCGGGTC | + |
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Preference number: 6 (lower is better) Translates to: DSSTTAAIQMAR*VARVNMSPHRV Trigger: GACCCGGTGTGGGCTCATGTTCACCCTCGCCACCAACCTCGCCATCTGGATGGCAGCCGTAGTGGATGAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS TCA 72 bp | CTTCAGCTGCACCTCCTGCACGCTTTGAGTCAGGGTTaGGGCGGGTGTGGCTGGTGTTGCCATGGGAACCAC | + |
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Preference number: 6 (lower is better) Translates to: LQLHLLHALSQG*GGCGWCCHGNH Trigger: GTGGTTCCCATGGCAACACCAGCCACACCCGCCTCAACCCTGACTCAAAGCGTGCAGGAGGTGCAGCTGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS TCA 72 bp | TGGCACCTGGGGGCCGAGATGATAGCCACTGCTTCCTaGGGACTTTCTAGGTTGGGAATGACCAGCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: WHLGAEMIATAS*GLSRLGMTSLG Trigger: CCCCAGGCTGGTCATTCCCAACCTAGAAAGTCCTCAGGAAGCAGTGGCTATCATCTCGGCCCCCAGGTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CCA 72 bp | AACAGAGAGATGTCTTTCAGGCACCGACGTCGCCAGTaGCACCTGGGGGCCGAGATGATAGCCACTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: NREMSFRHRRRQ*HLGAEMIATAS Trigger: GGAAGCAGTGGCTATCATCTCGGCCCCCAGGTGCCACTGGCGACGTCGGTGCCTGAAAGACATCTCTCTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CAA 72 bp | TCTTCAGCTGCACCTCCTGCACGCTTTGAGTCAGGGTaGAGGCGGGTGTGGCTGGTGTTGCCATGGGAACCA | + |
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Preference number: 6 (lower is better) Translates to: SSAAPPARFESG*RRVWLVLPWEP Trigger: TGGTTCCCATGGCAACACCAGCCACACCCGCCTCAACCCTGACTCAAAGCGTGCAGGAGGTGCAGCTGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS TCA 72 bp | AGACTATCCATAGCGCGGCCAGCAGCATCATGGTGGTaGGCAGAGCGAACACGTCCGTGTCATACACCGCCA | + |
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Preference number: 6 (lower is better) Translates to: RLSIARPAASWW*AERTRPCHTPP Trigger: TGGCGGTGTATGACACGGACGTGTTCGCTCTGCTCACCACCATGATGCTGCTGGCCGCGCTATGGATAGTCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS TCA 72 bp | GGCCTCTCTCTCCACTCACCTGGACCTCATAAAGGATaGAGACAGCCAACCCCACCACAAAGAGGAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: GLSLHSPGPHKG*RQPTPPQRGAG Trigger: GCCTGCTCCTCTTTGTGGTGGGGTTGGCTGTCTTCATCCTTTATGAGGTCCAGGTGAGTGGAGAGAGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CCA 72 bp | AGGGTGAACATGAGCCCACACCGGGTCAGGTCCAGGTaGGTATGGATACAGTCTTTAGCGGAGATCCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: RVNMSPHRVRSR*VWIQSLAEIQR Trigger: TCTCTGGATCTCCGCTAAAGACTGTATCCATACCCACCTGGACCTGACCCGGTGTGGGCTCATGTTCACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CCA 72 bp | ACAGGTAGAAATAGCCTTGCTGGAAGATCTGACAGATaGCTGTGCTGCAGAGGCACGGGTCTTCTTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: TGRNSLAGRSDR*LCCRGTGLLQL Trigger: CAGCTGAAGAAGACCCGTGCCTCTGCAGCACAGCCATCTGTCAGATCTTCCAGCAAGGCTATTTCTACCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CAA 90 bp | AGCGGAGATCCAGAGAAAGTAAGTCTGGACAATGACAAACACGGCTaGGATGATGGGGTGCAGGATCTTGATGGCCGACTGGCACTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SGDPEKVSLDNDKHG*DDGVQDLDGRLALK Trigger: TTTGAGTGCCAGTCGGCCATCAAGATCCTGCACCCCATCATCCAAGCCGTGTTTGTCATTGTCCAGACTTACTTTCTCTGGATCTCCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CAA 90 bp | AAAGAGGCTGTACTCGATGTTGAAGGGATACAGGTAGAAATAGCCTaGCTGGAAGATCTGACAGATGGCTGTGCTGCAGAGGCACGGGTC | + |
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Preference number: 6 (lower is better) Translates to: KEAVLDVEGIQVEIA*LEDLTDGCAAEARV Trigger: GACCCGTGCCTCTGCAGCACAGCCATCTGTCAGATCTTCCAGCAAGGCTATTTCTACCTGTATCCCTTCAACATCGAGTACAGCCTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS CAA 72 bp | GTACTCGATGTTGAAGGGATACAGGTAGAAATAGCCTaGCTGGAAGATCTGACAGATGGCTGTGCTGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: VLDVEGIQVEIA*LEDLTDGCAAE Trigger: CTCTGCAGCACAGCCATCTGTCAGATCTTCCAGCAAGGCTATTTCTACCTGTATCCCTTCAACATCGAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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| CDS TCA 72 bp | ACAGCATGGTGGAAGCAAAGAGGCTGTACTCGATGTTaGAGGGATACAGGTAGAAATAGCCTTGCTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: TAWWKQRGCTRC*RDTGRNSLAGR Trigger: TCTTCCAGCAAGGCTATTTCTACCTGTATCCCTTCAACATCGAGTACAGCCTCTTTGCTTCCACCATGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055490.9 ENSMUST00000106544.2 |
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