Pregenerated sensors for OTOL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027788Ensembl transcript IDs: ENSMUST00000053013.6
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCATCATGGTAGGAAGCTCTATATCCAAATCAAGAAGGAGGACCTaGTATATAAACTTTGAAACCTCAAAGCCCACCCCTAGAGACACA | + |
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Preference number: 1 (lower is better) Translates to: TIMVGSSISKSRRRT*YINFETSKPTPRDT Trigger: TGTGTCTCTAGGGGTGGGCTTTGAGGTTTCAAAGTTTATATATCAGGTCCTCCTTCTTGATTTGGATATAGAGCTTCCTACCATGATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| 3UTR TCA 72 bp | GTAGGAAGCTCTATATCCAAATCAAGAAGGAGGACCTaGTATATAAACTTTGAAACCTCAAAGCCCACCCCT | + |
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Preference number: 3 (lower is better) Translates to: VGSSISKSRRRT*YINFETSKPTP Trigger: AGGGGTGGGCTTTGAGGTTTCAAAGTTTATATATCAGGTCCTCCTTCTTGATTTGGATATAGAGCTTCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR GCA 90 bp | GTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAAGAGGCCGAGGGGCCTaGGGTGGACTCAGCCATTGC | + |
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Preference number: 4 (lower is better) Translates to: VPENSRVYDHHGRKLYIQRGRGA*GGLSHC Trigger: GCAATGGCTGAGTCCACCGCAGGCCCCTCGGCCTCT...TTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CCA 90 bp | CATCATGGTAGGAAGCTCTATATCCAAATCAAGAAGGAGGACCTGATATATAAAAGGCAGGGGAGCCGGTaGTGGGCTCTGCCATGGCAG | + |
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Preference number: 4 (lower is better) Translates to: HHGRKLYIQIKKEDLIYKRQGSR*WALPWQ Trigger: CTGCCATGGCAGAGCCCACCACCGGCTCCCCTGCCT...TTTATATATCAGGTCCTCCTTCTTGATTTGGATATAGAGCTTCCTACCATGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR TCA 90 bp | GACCATCATGGTAGGAAGCTCTATATCCAAATCAAGAAGGAGGACCTGATATATCGCCTTTGGAACCCTTaGCACCCCGAGAGCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: DHHGRKLYIQIKKEDLIYRLWNP*HPESPS Trigger: AGAAGGGCTCTCGGGGTGTCAAGGGTTCCAAAGGCG...ATATATCAGGTCCTCCTTCTTGATTTGGATATAGAGCTTCCTACCATGATGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CCA 90 bp | TTGGGGCTCATGGTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCCTTTCTGGCCTTTaGGACCTTGAGGTCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LGLMVPENSRVYDHHGRKLLSGL*DLEVQW Trigger: CCACTGGACCTCAAGGTCCCAAAGGCCAGAAAGGAG...CTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAACCATGAGCCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR TCA 90 bp | AGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAATCAAGACCCCAGGCTCTCCAATaGAGCCATGGGCCCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: RIVEYMTIMVGSSISKSRPQALQ*SHGPQR Trigger: CCTCTGGGGCCCATGGCTTCATTGGAGAGCCTGGGG...TCTTGATTTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR TCA 90 bp | CTCATGGTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATGCGTCTCTCTGGATTTaGACTGCTTCCTGTTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LMVPENSRVYDHHGRKLYASLWI*TASCCG Trigger: CCCGCAACAGGAAGCAGTTCAAATCCAGAGAGACGC...ATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAACCATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR GCA 90 bp | CACCTCCTAATCCTTTCAAACAGTTCAACTCCCTGCAACCAAATATTAAAATATCTGGGTACCCCGGAATaGCACCTGCTCCTTGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: HLLILSNSSTPCNQILKYLGTPE*HLLLGP Trigger: GGGACCAAGGAGCAGGTGGCATTCCGGGGTACCCAG...ATATTTTAATATTTGGTTGCAGGGAGTTGAACTGTTTGAAAGGATTAGGAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CCA 90 bp | GAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAATCAAGGACCTTGAGGTCCAGTaGTTCCTGGGTGTCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: ENSRVYDHHGRKLYIQIKDLEVQ*FLGVLG Trigger: GCCCAGGACACCCAGGAACCACTGGACCTCAAGGTC...CTTGATTTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CCA 90 bp | AATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAATCAAGAAGTCTCCAATGAAGCCATaGGCCCCAGAGGCCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NSRVYDHHGRKLYIQIKKSPMKP*APEAPG Trigger: CCCTGGGGCCTCTGGGGCCCATGGCTTCATTGGAGA...CTTCTTGATTTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CCA 90 bp | CTCATGGTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATGCCCTTCTTCCCTGTTaGCCCTCGAACACCTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: LMVPENSRVYDHHGRKLYALLPC*PSNTFA Trigger: AGCAAAGGTGTTCGAGGGCCAACAGGGAAGAAGGGC...ATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAACCATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR TCA 90 bp | CACCTCCTAATCCTTTCAAACAGTTCAACTCCCTGCAACCAAATATTAAAATATTGGCCTTTGGGACCTTaGGGTCCAGTGGTTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: HLLILSNSSTPCNQILKYWPLGP*GPVVPG Trigger: CCCAGGAACCACTGGACCTCAAGGTCCCAAAGGCCA...ATATTTTAATATTTGGTTGCAGGGAGTTGAACTGTTTGAAAGGATTAGGAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR TCA 90 bp | GACCATCATGGTAGGAAGCTCTATATCCAAATCAAGAAGGAGGACCTGATATATCCCATTCCAGTCCTTTaGCACTTCCAGCCACACTTG | + |
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Preference number: 4 (lower is better) Translates to: DHHGRKLYIQIKKEDLIYPIPVL*HFQPHL Trigger: CAAGTGTGGCTGGAAGTGTCAAAGGACTGGAATGGG...ATATATCAGGTCCTCCTTCTTGATTTGGATATAGAGCTTCCTACCATGATGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CCA 90 bp | CATCATGGTAGGAAGCTCTATATCCAAATCAAGAAGGAGGACCTGATATATAAATGGTGGGCTCTGCCATaGCAGCCGTTTCCGTATGGA | + |
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Preference number: 4 (lower is better) Translates to: HHGRKLYIQIKKEDLIYKWWALP*QPFPYG Trigger: TCCATACGGAAACGGCTGCCATGGCAGAGCCCACCA...TTTATATATCAGGTCCTCCTTCTTGATTTGGATATAGAGCTTCCTACCATGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CCA 90 bp | ATATATTTGAACCTCTGGGTGCCATTCTTATTCAAACCACCACACAATTACTTAGGTTCCTGGGTGTCCTaGGCTGCCAGTGTCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: IYLNLWVPFLFKPPHNYLGSWVS*AASVTS Trigger: ACTGGTGACACTGGCAGCCCAGGACACCCAGGAACC...TAAGTAATTGTGTGGTGGTTTGAATAAGAATGGCACCCAGAGGTTCAAATATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CCA 90 bp | CACCTCCTAATCCTTTCAAACAGTTCAACTCCCTGCAACCAAATATTAAAATATAGGTCCAGTGGTTCCTaGGTGTCCTGGGCTGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: HLLILSNSSTPCNQILKYRSSGS*VSWAAS Trigger: ACTGGCAGCCCAGGACACCCAGGAACCACTGGACCT...ATATTTTAATATTTGGTTGCAGGGAGTTGAACTGTTTGAAAGGATTAGGAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR TCA 90 bp | AGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAATCAAGAGACCAGAATCGCCTCTaGGCCCTGGTAGACCATCTG | + |
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Preference number: 4 (lower is better) Translates to: RIVEYMTIMVGSSISKSRDQNRL*ALVDHL Trigger: CAGATGGTCTACCAGGGCTCAGAGGCGATTCTGGTC...TCTTGATTTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CCA 90 bp | AATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAATCAAGAAGTGCACCTTGCTCTCCTaGTTTTCCTGGGTACCCCGG | + |
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Preference number: 4 (lower is better) Translates to: NSRVYDHHGRKLYIQIKKCTLLS*FSWVPR Trigger: CCGGGGTACCCAGGAAAACCAGGAGAGCAAGGTGCA...CTTCTTGATTTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CCA 90 bp | CACCTCCTAATCCTTTCAAACAGTTCAACTCCCTGCAACCAAATATTAAAATATACTGAAAGCCGACTGTaGGACTTGTGTGGCCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: HLLILSNSSTPCNQILKYTESRL*DLCGLA Trigger: GGCGAGGCCACACAAGTCCCACAGTCGGCTTTCAGT...ATATTTTAATATTTGGTTGCAGGGAGTTGAACTGTTTGAAAGGATTAGGAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR TCA 90 bp | CTCATGGTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATCTCCTTTCTGCCCAGTaGCAAATGAACAACAATGGC | + |
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Preference number: 4 (lower is better) Translates to: LMVPENSRVYDHHGRKLYLLSAQ*QMNNNG Trigger: GCCATTGTTGTTCATTTGTCACTGGGCAGAAAGGAG...ATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAACCATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR GCA 90 bp | GACCATCATGGTAGGAAGCTCTATATCCAAATCAAGAAGGAGGACCTGATATATCCGGGTTCTCCTTTCTaGCCAGTGACAAATGAACAA | + |
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Preference number: 4 (lower is better) Translates to: DHHGRKLYIQIKKEDLIYPGSPF*PVTNEQ Trigger: TTGTTCATTTGTCACTGGGCAGAAAGGAGAACCCGG...ATATATCAGGTCCTCCTTCTTGATTTGGATATAGAGCTTCCTACCATGATGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR TCA 90 bp | ATATATTTGAACCTCTGGGTGCCATTCTTATTCAAACCACCACACAATTACTTAACCCCTTTTGCCTTCTaGCCCAACATCTCCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: IYLNLWVPFLFKPPHNYLTPFAF*PNISSA Trigger: AGCAGAGGAGATGTTGGGTCAGAAGGCAAAAGGGGT...TAAGTAATTGTGTGGTGGTTTGAATAAGAATGGCACCCAGAGGTTCAAATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR TCA 90 bp | GAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAATCAAGCACTCAATTTCAGAATaGGGAGGAGGGAGGCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: ENSRVYDHHGRKLYIQIKHSISE*GGGRPD Trigger: ATCAGGCCTCCCTCCTCCTCATTCTGAAATTGAGTG...CTTGATTTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR TCA 90 bp | GTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAACTTCCAGCCACACTTaGTCTCCTGCACTCAATTTC | + |
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Preference number: 4 (lower is better) Translates to: VPENSRVYDHHGRKLYIQTSSHT*SPALNF Trigger: GAAATTGAGTGCAGGAGATCAAGTGTGGCTGGAAGT...TTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR GCA 90 bp | AGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAATCAAGATCTCTGGATTTGAACTaGTTCCTGTTGCGGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: RIVEYMTIMVGSSISKSRSLDLN*FLLRAT Trigger: CGTGGCCCGCAACAGGAAGCAGTTCAAATCCAGAGA...TCTTGATTTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CCA 90 bp | GAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAATCAAGTTCCTTTATCTCCCTTaGGACCAAGTGCACCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: ENSRVYDHHGRKLYIQIKFLYLP*DQVHLA Trigger: AGCAAGGTGCACTTGGTCCCAAGGGAGATAAAGGAA...CTTGATTTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR GCA 90 bp | AATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAATCAAGAAGGTATGGTGTGGTCTTTaGTTCTGTGGCCACATCATC | + |
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Preference number: 4 (lower is better) Translates to: NSRVYDHHGRKLYIQIKKVWCGL*FCGHII Trigger: GATGATGTGGCCACAGAAGCAAAGACCACACCATAC...CTTCTTGATTTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR TCA 90 bp | CACCTCCTAATCCTTTCAAACAGTTCAACTCCCTGCAACCAAATATTAAAATATCTGCCCAGTGACAAATaGACAACAATGGCAGCAATT | + |
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Preference number: 4 (lower is better) Translates to: HLLILSNSSTPCNQILKYLPSDK*TTMAAI Trigger: AATTGCTGCCATTGTTGTTCATTTGTCACTGGGCAG...ATATTTTAATATTTGGTTGCAGGGAGTTGAACTGTTTGAAAGGATTAGGAGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR GCA 90 bp | CATCATGGTAGGAAGCTCTATATCCAAATCAAGAAGGAGGACCTGATATATAAACCACACTTGATCTCCTaGACTCAATTTCAGAATGAG | + |
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Preference number: 4 (lower is better) Translates to: HHGRKLYIQIKKEDLIYKPHLIS*TQFQNE Trigger: CTCATTCTGAAATTGAGTGCAGGAGATCAAGTGTGG...TTTATATATCAGGTCCTCCTTCTTGATTTGGATATAGAGCTTCCTACCATGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CCA 90 bp | AGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAATCAAGAATTTGGTGTATGGTGTaGTCTTTGCTTCTGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RIVEYMTIMVGSSISKSRIWCMV*SLLLWP Trigger: TGGCCACAGAAGCAAAGACCACACCATACACCAAAT...TCTTGATTTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CCA 90 bp | GTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAACGTAAATTTGGTGTATaGTGTGGTCTTTGCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: VPENSRVYDHHGRKLYIQRKFGV*CGLCFC Trigger: ACAGAAGCAAAGACCACACCATACACCAAATTTACG...TTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CCA 90 bp | CATCATGGTAGGAAGCTCTATATCCAAATCAAGAAGGAGGACCTGATATATAAAACTAAAAGTTTCCTCTaGGTACAGAAGGAACCCACT | + |
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Preference number: 4 (lower is better) Translates to: HHGRKLYIQIKKEDLIYKTKSFL*VQKEPT Trigger: AGTGGGTTCCTTCTGTACCCAGAGGAAACTTTTAGT...TTTATATATCAGGTCCTCCTTCTTGATTTGGATATAGAGCTTCCTACCATGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CCA 90 bp | CGAAGGGAAGGAGACGGGTTGTGGCAGAGGCCGAGGGGCCTGCGGTaGACTCAGCCATTGCCAAGGCAGGGGAGCCGGTGGTGGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: RREGDGLWQRPRGLR*TQPLPRQGSRWWAL Trigger: CAGAGCCCACCACCGGCTCCCCTGCCTTGGCAATGGCTGAGTCCACCGCAGGCCCCTCGGCCTCTGCCACAACCCGTCTCCTTCCCTTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CCA 90 bp | CTCGCCTTTGGAACCCTTGACACCCCGAGAGCCCTTCTTCCCTGTTaGCCCTCGAACACCTTTGCTTCCAAGCTCACCCTTTGGTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: LAFGTLDTPRALLPC*PSNTFASKLTLWSR Trigger: GCGGGACCAAAGGGTGAGCTTGGAAGCAAAGGTGTTCGAGGGCCAACAGGGAAGAAGGGCTCTCGGGGTGTCAAGGGTTCCAAAGGCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CAA 90 bp | TTGGGGCTCATGGTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGAGGGAAGGAGACGGGTaGTGGCAGAGGCCGAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LGLMVPENSRVYDHHGRKREGDG*WQRPRG Trigger: GCCCCTCGGCCTCTGCCACAACCCGTCTCCTTCCCT...CTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAACCATGAGCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS GCA 90 bp | ATTCCCACACAGTTCTCCCTTAGAGCCTTTTTGTCCTTTCGTTCCTaGCGGGCCGATGGTTCCTTTATCTCCCTTGGGACCAAGTGCACC | + |
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Preference number: 5 (lower is better) Translates to: IPTQFSLRAFLSFRS*RADGSFISLGTKCT Trigger: GGTGCACTTGGTCCCAAGGGAGATAAAGGAACCATCGGCCCGGCAGGAACGAAAGGACAAAAAGGCTCTAAGGGAGAACTGTGTGGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS TCA 90 bp | GATGCTGTCATCCTCGGGGCCGACATACAGCCCATTCCAGTCCTTTaGCACTTCCAGCCACACTTGATCTCCTGCACTCAATTTCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: DAVILGADIQPIPVL*HFQPHLISCTQFQN Trigger: ATTCTGAAATTGAGTGCAGGAGATCAAGTGTGGCTGGAAGTGTCAAAGGACTGGAATGGGCTGTATGTCGGCCCCGAGGATGACAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CAA 90 bp | GTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAACGGTGGACTCAGCCATaGCCAAGGCAGGGGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: VPENSRVYDHHGRKLYIQRWTQP*PRQGSR Trigger: CCGGCTCCCCTGCCTTGGCAATGGCTGAGTCCACCG...TTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CAA 90 bp | CTCATGGTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATCCACCCTTCTCGCCCTaGGCCCCAGGCTCTCCAATG | + |
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Preference number: 5 (lower is better) Translates to: LMVPENSRVYDHHGRKLYPPFSP*APGSPM Trigger: CATTGGAGAGCCTGGGGCCAAGGGCGAGAAGGGTGG...ATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAACCATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS TCA 90 bp | TTGACACTTCCAGCCACACTTGATCTCCTGCACTCAATTTCAGAATaGGGAGGAGGGAGGCCTGATCTACTTGCTGACCATAGAGCGTCT | + |
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Preference number: 5 (lower is better) Translates to: LTLPATLDLLHSISE*GGGRPDLLADHRAS Trigger: AGACGCTCTATGGTCAGCAAGTAGATCAGGCCTCCCTCCTCCTCATTCTGAAATTGAGTGCAGGAGATCAAGTGTGGCTGGAAGTGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CAA 90 bp | GTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAACTGGCCTTTGGGACCTaGAGGTCCAGTGGTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: VPENSRVYDHHGRKLYIQLAFGT*RSSGSW Trigger: CCAGGAACCACTGGACCTCAAGGTCCCAAAGGCCAG...TTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CAA 90 bp | CTCATGGTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATGGGACCAAGTGCACCTaGCTCTCCTGGTTTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: LMVPENSRVYDHHGRKLYGTKCT*LSWFSW Trigger: CCAGGAAAACCAGGAGAGCAAGGTGCACTTGGTCCC...ATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAACCATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CAA 90 bp | TTGGGGCTCATGGTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGGTTCCTTTATCTCCCTaGGGACCAAGTGCACCTTGC | + |
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Preference number: 5 (lower is better) Translates to: LGLMVPENSRVYDHHGRKVPLSP*GPSAPC Trigger: GCAAGGTGCACTTGGTCCCAAGGGAGATAAAGGAAC...CTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAACCATGAGCCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CCA 90 bp | CCGTTTCCGTATGGACGGTTTCTTCTCCATCCAGAAAGAAGCCACTaGACGGCTTTAAGCCCTTCAACATCTCTTTTCCTTCAGATTTCT | + |
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Preference number: 5 (lower is better) Translates to: PFPYGRFLLHPERSH*TALSPSTSLFLQIS Trigger: AGAAATCTGAAGGAAAAGAGATGTTGAAGGGCTTAAAGCCGTCCAGTGGCTTCTTTCTGGATGGAGAAGAAACCGTCCATACGGAAACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CAA 90 bp | GACCATCATGGTAGGAAGCTCTATATCCAAATCAAGAAGGAGGACCTGATATATGGAGGCCTGATCTACTaGCTGACCATAGAGCGTCTC | + |
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Preference number: 5 (lower is better) Translates to: DHHGRKLYIQIKKEDLIYGGLIY*LTIERL Trigger: GAGACGCTCTATGGTCAGCAAGTAGATCAGGCCTCC...ATATATCAGGTCCTCCTTCTTGATTTGGATATAGAGCTTCCTACCATGATGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CAA 90 bp | TTGGGGCTCATGGTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGTGTATGGTGTGGTCTTaGCTTCTGTGGCCACATCAT | + |
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Preference number: 5 (lower is better) Translates to: LGLMVPENSRVYDHHGRKCMVWS*LLWPHH Trigger: ATGATGTGGCCACAGAAGCAAAGACCACACCATACA...CTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAACCATGAGCCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CAA 90 bp | GTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAGGGGGAGGGAAGGGCTaGGATAAAAGGGCACTGAAA | + |
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Preference number: 5 (lower is better) Translates to: VPENSRVYDHHGRKLYIQGGGKG*DKRALK Trigger: TTTCAGTGCCCTTTTATCCAAGCCCTTCCCTCCCCC...TTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS TCA 90 bp | TTGTTTTCCCATCTTTCCGGGTTCTCCTTTCTGCCCAGTGACAAATaGACAACAATGGCAGCAATTCAAAACGAAACCAGTTGTGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LFSHLSGFSFLPSDK*TTMAAIQNETSCVQ Trigger: CTGGACACAACTGGTTTCGTTTTGAATTGCTGCCATTGTTGTTCATTTGTCACTGGGCAGAAAGGAGAACCCGGAAAGATGGGAAAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS GCA 90 bp | TCTCCTTTAGGGCCTTGTTTTCCCATCTTTCCGGGTTCTCCTTTCTaGCCAGTGACAAATGAACAACAATGGCAGCAATTCAAAACGAAA | + |
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Preference number: 5 (lower is better) Translates to: SPLGPCFPIFPGSPF*PVTNEQQWQQFKTK Trigger: TTTCGTTTTGAATTGCTGCCATTGTTGTTCATTTGTCACTGGGCAGAAAGGAGAACCCGGAAAGATGGGAAAACAAGGCCCTAAAGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CAA 90 bp | AGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAATCAAGAAGCCCTTCTTCCCTGTaGGCCCTCGAACACCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: RIVEYMTIMVGSSISKSRSPSSL*ALEHLC Trigger: GCAAAGGTGTTCGAGGGCCAACAGGGAAGAAGGGCT...TCTTGATTTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CAA 90 bp | GTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAAGCGTCTCTCTGGATTaGAACTGCTTCCTGTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: VPENSRVYDHHGRKLYIQSVSLD*NCFLLR Trigger: CCGCAACAGGAAGCAGTTCAAATCCAGAGAGACGCT...TTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CAA 90 bp | GTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAGCCCATTCCAGTCCTTaGACACTTCCAGCCACACTT | + |
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Preference number: 5 (lower is better) Translates to: VPENSRVYDHHGRKLYIQAHSSP*TLPATL Trigger: AAGTGTGGCTGGAAGTGTCAAAGGACTGGAATGGGC...TTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CAA 90 bp | CTCATGGTTCCAGAGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATCACTTCCAGCCACACTaGATCTCCTGCACTCAATTT | + |
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Preference number: 5 (lower is better) Translates to: LMVPENSRVYDHHGRKLYHFQPH*ISCTQF Trigger: AAATTGAGTGCAGGAGATCAAGTGTGGCTGGAAGTG...ATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCTCTGGAACCATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CAA 90 bp | AATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAATCAAGAAGTCATTAGAGAGAATCTaGTCAAACTTGATGGGAACG | + |
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Preference number: 5 (lower is better) Translates to: NSRVYDHHGRKLYIQIKKSLERI*SNLMGT Trigger: CGTTCCCATCAAGTTTGACAAGATTCTCTCTAATGA...CTTCTTGATTTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS-3UTR CAA 90 bp | AGAATAGTAGAGTATATGACCATCATGGTAGGAAGCTCTATATCCAAATCAAGAGATTTCTTCGTAAATTaGGTGTATGGTGTGGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: RIVEYMTIMVGSSISKSRDFFVN*VYGVVF Trigger: AAAGACCACACCATACACCAAATTTACGAAGAAATC...TCTTGATTTGGATATAGAGCTTCCTACCATGATGGTCATATACTCTACTATTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS GCA 72 bp | GGCAGAGGCCGAGGGGCCTGCGGTGGACTCAGCCATTaGCAAGGCAGGGGAGCCGGTGGTGGGCTCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: GRGRGACGGLSH*QGRGAGGGLCH Trigger: ATGGCAGAGCCCACCACCGGCTCCCCTGCCTTGGCAATGGCTGAGTCCACCGCAGGCCCCTCGGCCTCTGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CCA 72 bp | GGAGACGGGTTGTGGCAGAGGCCGAGGGGCCTGCGGTaGACTCAGCCATTGCCAAGGCAGGGGAGCCGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GDGLWQRPRGLR*TQPLPRQGSRW Trigger: CCACCGGCTCCCCTGCCTTGGCAATGGCTGAGTCCACCGCAGGCCCCTCGGCCTCTGCCACAACCCGTCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CAA 72 bp | TGGCAGAGGCCGAGGGGCCTGCGGTGGACTCAGCCATaGCCAAGGCAGGGGAGCCGGTGGTGGGCTCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: WQRPRGLRWTQP*PRQGSRWWALP Trigger: TGGCAGAGCCCACCACCGGCTCCCCTGCCTTGGCAATGGCTGAGTCCACCGCAGGCCCCTCGGCCTCTGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CCA 72 bp | CCAGAGAGAAGCTCTCGAAGGGAAGGAGACGGGTTGTaGCAGAGGCCGAGGGGCCTGCGGTGGACTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PERSSRREGDGL*QRPRGLRWTQP Trigger: TGGCTGAGTCCACCGCAGGCCCCTCGGCCTCTGCCACAACCCGTCTCCTTCCCTTCGAGAGCTTCTCTCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CAA 90 bp | AACCAGTTGTGTCCAGAGAGAAGCTCTCGAAGGGAAGGAGACGGGTaGTGGCAGAGGCCGAGGGGCCTGCGGTGGACTCAGCCATTGCCA | + |
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Preference number: 6 (lower is better) Translates to: NQLCPERSSRREGDG*WQRPRGLRWTQPLP Trigger: TGGCAATGGCTGAGTCCACCGCAGGCCCCTCGGCCTCTGCCACAACCCGTCTCCTTCCCTTCGAGAGCTTCTCTCTGGACACAACTGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS TCA 72 bp | ACTGTGGGACTTGTGTGGCCTCGCCTTTGGAACCCTTaGCACCCCGAGAGCCCTTCTTCCCTGTTGGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: TVGLVWPRLWNP*HPESPSSLLAL Trigger: GAGGGCCAACAGGGAAGAAGGGCTCTCGGGGTGTCAAGGGTTCCAAAGGCGAGGCCACACAAGTCCCACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS GCA 72 bp | GAGAGCCCTTCTTCCCTGTTGGCCCTCGAACACCTTTaGTTCCAAGCTCACCCTTTGGTCCCGCAGGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: ESPSSLLALEHL*FQAHPLVPQVR Trigger: CCGGACCTGCGGGACCAAAGGGTGAGCTTGGAAGCAAAGGTGTTCGAGGGCCAACAGGGAAGAAGGGCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CCA 72 bp | CTTGGGACCAAGTGCACCTTGCTCTCCTGGTTTTCCTaGGTACCCCGGAATGCCACCTGCTCCTTGGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LGTKCTLLSWFS*VPRNATCSLVP Trigger: GGGGACCAAGGAGCAGGTGGCATTCCGGGGTACCCAGGAAAACCAGGAGAGCAAGGTGCACTTGGTCCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CAA 72 bp | CGAGAGCCCTTCTTCCCTGTTGGCCCTCGAACACCTTaGCTTCCAAGCTCACCCTTTGGTCCCGCAGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: REPFFPVGPRTP*LPSSPFGPAGP Trigger: CGGACCTGCGGGACCAAAGGGTGAGCTTGGAAGCAAAGGTGTTCGAGGGCCAACAGGGAAGAAGGGCTCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CAA 72 bp | GACTGTGGGACTTGTGTGGCCTCGCCTTTGGAACCCTaGACACCCCGAGAGCCCTTCTTCCCTGTTGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: DCGTCVASPLEP*TPREPFFPVGP Trigger: AGGGCCAACAGGGAAGAAGGGCTCTCGGGGTGTCAAGGGTTCCAAAGGCGAGGCCACACAAGTCCCACAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CAA 90 bp | CTGAAAGCCGACTGTGGGACTTGTGTGGCCTCGCCTTTGGAACCCTaGACACCCCGAGAGCCCTTCTTCCCTGTTGGCCCTCGAACACCT | + |
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Preference number: 6 (lower is better) Translates to: LKADCGTCVASPLEP*TPREPFFPVGPRTP Trigger: AGGTGTTCGAGGGCCAACAGGGAAGAAGGGCTCTCGGGGTGTCAAGGGTTCCAAAGGCGAGGCCACACAAGTCCCACAGTCGGCTTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CCA 72 bp | TTTGGGACCTTGAGGTCCAGTGGTTCCTGGGTGTCCTaGGCTGCCAGTGTCACCAGTCTCTCCTTTAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: FGTLRSSGSWVS*AASVTSLSFRA Trigger: GGCCCTAAAGGAGAGACTGGTGACACTGGCAGCCCAGGACACCCAGGAACCACTGGACCTCAAGGTCCCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CAA 90 bp | TTGACACCCCGAGAGCCCTTCTTCCCTGTTGGCCCTCGAACACCTTaGCTTCCAAGCTCACCCTTTGGTCCCGCAGGTCCGGTGAAACCA | + |
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Preference number: 6 (lower is better) Translates to: LTPREPFFPVGPRTP*LPSSPFGPAGPVKP Trigger: TGGTTTCACCGGACCTGCGGGACCAAAGGGTGAGCTTGGAAGCAAAGGTGTTCGAGGGCCAACAGGGAAGAAGGGCTCTCGGGGTGTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CAA 90 bp | AAAAGGGCACTGAAAGCCGACTGTGGGACTTGTGTGGCCTCGCCTTaGGAACCCTTGACACCCCGAGAGCCCTTCTTCCCTGTTGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: KRALKADCGTCVASP*EPLTPREPFFPVGP Trigger: AGGGCCAACAGGGAAGAAGGGCTCTCGGGGTGTCAAGGGTTCCAAAGGCGAGGCCACACAAGTCCCACAGTCGGCTTTCAGTGCCCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CCA 72 bp | GGAACCCTTGACACCCCGAGAGCCCTTCTTCCCTGTTaGCCCTCGAACACCTTTGCTTCCAAGCTCACCCTT | + |
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Preference number: 6 (lower is better) Translates to: GTLDTPRALLPC*PSNTFASKLTL Trigger: AAGGGTGAGCTTGGAAGCAAAGGTGTTCGAGGGCCAACAGGGAAGAAGGGCTCTCGGGGTGTCAAGGGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CAA 72 bp | TTCGTTCCTGCCGGGCCGATGGTTCCTTTATCTCCCTaGGGACCAAGTGCACCTTGCTCTCCTGGTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: FVPAGPMVPLSP*GPSAPCSPGFP Trigger: AGGAAAACCAGGAGAGCAAGGTGCACTTGGTCCCAAGGGAGATAAAGGAACCATCGGCCCGGCAGGAACGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CAA 72 bp | CATCCTCGGGGCCGACATACAGCCCATTCCAGTCCTTaGACACTTCCAGCCACACTTGATCTCCTGCACTCA | + |
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Preference number: 6 (lower is better) Translates to: HPRGRHTAHSSP*TLPATLDLLHS Trigger: TGAGTGCAGGAGATCAAGTGTGGCTGGAAGTGTCAAAGGACTGGAATGGGCTGTATGTCGGCCCCGAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS TCA 72 bp | ATCCTCGGGGCCGACATACAGCCCATTCCAGTCCTTTaGCACTTCCAGCCACACTTGATCTCCTGCACTCAA | + |
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Preference number: 6 (lower is better) Translates to: ILGADIQPIPVL*HFQPHLISCTQ Trigger: TTGAGTGCAGGAGATCAAGTGTGGCTGGAAGTGTCAAAGGACTGGAATGGGCTGTATGTCGGCCCCGAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS TCA 72 bp | TGCTTCCAAGCTCACCCTTTGGTCCCGCAGGTCCGGTaGAACCAGGAGAACCTATCTCTCCTTTTTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: CFQAHPLVPQVR*NQENLSLLFLL Trigger: AAGGAGAAAAAGGAGAGATAGGTTCTCCTGGTTTCACCGGACCTGCGGGACCAAAGGGTGAGCTTGGAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CAA 72 bp | AGTGCCATTCCCACACAGTTCTCCCTTAGAGCCTTTTaGTCCTTTCGTTCCTGCCGGGCCGATGGTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SAIPTQFSLRAF*SFRSCRADGSF Trigger: AAAGGAACCATCGGCCCGGCAGGAACGAAAGGACAAAAAGGCTCTAAGGGAGAACTGTGTGGGAATGGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CAA 90 bp | CTCTCCTTTAGTGCCATTCCCACACAGTTCTCCCTTAGAGCCTTTTaGTCCTTTCGTTCCTGCCGGGCCGATGGTTCCTTTATCTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: LSFSAIPTQFSLRAF*SFRSCRADGSFISL Trigger: AAGGGAGATAAAGGAACCATCGGCCCGGCAGGAACGAAAGGACAAAAAGGCTCTAAGGGAGAACTGTGTGGGAATGGCACTAAAGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CAA 90 bp | AGATGCTGTCATCCTCGGGGCCGACATACAGCCCATTCCAGTCCTTaGACACTTCCAGCCACACTTGATCTCCTGCACTCAATTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: RCCHPRGRHTAHSSP*TLPATLDLLHSISE Trigger: TTCTGAAATTGAGTGCAGGAGATCAAGTGTGGCTGGAAGTGTCAAAGGACTGGAATGGGCTGTATGTCGGCCCCGAGGATGACAGCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS TCA 72 bp | AGCCCATTCCAGTCCTTTGACACTTCCAGCCACACTTaGTCTCCTGCACTCAATTTCAGAATGAGGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SPFQSFDTSSHT*SPALNFRMRRR Trigger: CCTCCTCCTCATTCTGAAATTGAGTGCAGGAGATCAAGTGTGGCTGGAAGTGTCAAAGGACTGGAATGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CAA 90 bp | AGGAACACTACAGTTAAATTTCCCAGTGACGGGGCTGTAATCCCCTaGGTCATTAGAGAGAATCTTGTCAAACTTGATGGGAACGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: RNTTVKFPSDGAVIP*VIRENLVKLDGNVG Trigger: CCCAACGTTCCCATCAAGTTTGACAAGATTCTCTCTAATGACCAAGGGGATTACAGCCCCGTCACTGGGAAATTTAACTGTAGTGTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CAA 72 bp | ATGAACAACAATGGCAGCAATTCAAAACGAAACCAGTaGTGTCCAGAGAGAAGCTCTCGAAGGGAAGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: MNNNGSNSKRNQ*CPERSSRREGD Trigger: GTCTCCTTCCCTTCGAGAGCTTCTCTCTGGACACAACTGGTTTCGTTTTGAATTGCTGCCATTGTTGTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS CAA 72 bp | ACAGTTAAATTTCCCAGTGACGGGGCTGTAATCCCCTaGGTCATTAGAGAGAATCTTGTCAAACTTGATGGG | + |
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Preference number: 6 (lower is better) Translates to: TVKFPSDGAVIP*VIRENLVKLDG Trigger: CCCATCAAGTTTGACAAGATTCTCTCTAATGACCAAGGGGATTACAGCCCCGTCACTGGGAAATTTAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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| CDS GCA 72 bp | AGATTTCTTCGTAAATTTGGTGTATGGTGTGGTCTTTaGTTCTGTGGCCACATCATCCATAGCCAAAATAGT | + |
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Preference number: 6 (lower is better) Translates to: RFLRKFGVWCGL*FCGHIIHSQNS Trigger: ACTATTTTGGCTATGGATGATGTGGCCACAGAAGCAAAGACCACACCATACACCAAATTTACGAAGAAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053013.6 |
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