Pregenerated sensors for OTOA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034990Ensembl transcript IDs: ENSMUST00000047025.15, ENSMUST00000163275.2, ENSMUST00000165409.8, ENSMUST00000170106.2
Found 250 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCGCCTGGGAGGCAGGCTCTCCTGTTGGGGACCCAGTGGAGGCTaGCCAGGTAGGGCTGGAACTCAGAGGATCGGTCTGCCAGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: KRLGGRLSCWGPSGG*PGRAGTQRIGLPGV Trigger: CACTCCTGGCAGACCGATCCTCTGAGTTCCAGCCCTACCTGGCCAGCCTCCACTGGGTCCCCAACAGGAGAGCCTGCCTCCCAGGCGCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163275.2 |
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| 3UTR CCA 90 bp | CAGGGTACAGCCAAGCCAAAGCGCCTGGGAGGCAGGCTCTCCTGTTaGGGACCCAGTGGAGGCTGGCCAGGTAGGGCTGGAACTCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: QGTAKPKRLGGRLSC*GPSGGWPGRAGTQR Trigger: CCTCTGAGTTCCAGCCCTACCTGGCCAGCCTCCACTGGGTCCCCAACAGGAGAGCCTGCCTCCCAGGCGCTTTGGCTTGGCTGTACCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163275.2 |
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| 3UTR GCA 90 bp | TACTGGAAGAGGGCCAGGAAGAGGTGGTCACTCATGGCATCGATGTaGGAGCACGGCACGCCCTTCACCAGCTGCCCGGCACTCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: YWKRARKRWSLMASM*EHGTPFTSCPALRS Trigger: GCTCCTGAGTGCCGGGCAGCTGGTGAAGGGCGTGCCGTGCTCGCACATCGATGCCATGAGTGACCACCTCTTCCTGGCCCTCTTCCAGTA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR CCA 90 bp | GAGGCAGCTGTTGCTCTGTTCACCTGTTGGGGACCCAGTGGAGGCTaGCCAGGTAGGGCTGGAACTCAGAGGATCGGTCTGCCAGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: EAAVALFTCWGPSGG*PGRAGTQRIGLPGV Trigger: CACTCCTGGCAGACCGATCCTCTGAGTTCCAGCCCTACCTGGCCAGCCTCCACTGGGTCCCCAACAGGTGAACAGAGCAACAGCTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
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| 3UTR TCA 90 bp | CATGCAGAGCAGCGGCCCAGGCTCTGGGGGAGATCCCTCTCTCAATaGAGGAGGCTGGCAAGTGGCACAGGAGGTGTCCCACAATGTCCA | + |
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Preference number: 1 (lower is better) Translates to: HAEQRPRLWGRSLSQ*RRLASGTGGVPQCP Trigger: TGGACATTGTGGGACACCTCCTGTGCCACTTGCCAGCCTCCTTCATTGAGAGAGGGATCTCCCCCAGAGCCTGGGCCGCTGCTCTGCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR GCA 90 bp | GCCCCAGCCTGTAACCTGGTTGAGGGTAGAGATGGCGCTGTGCACTaGATCGGAGGAGAGGGATTCCAGCTGACTGCTGGTCAGACCTAC | + |
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Preference number: 1 (lower is better) Translates to: APACNLVEGRDGAVH*IGGEGFQLTAGQTY Trigger: GTAGGTCTGACCAGCAGTCAGCTGGAATCCCTCTCCTCCGATGCAGTGCACAGCGCCATCTCTACCCTCAACCAGGTTACAGGCTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR GCA 90 bp | GAGATCCTTGTGGTCCATGCTGTAGAAGGCTTGCGTACCCACCCCTaGCAGCAGCACGCCCATCTGGCAGACGTTGTAGAAGGACAGCAC | + |
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Preference number: 1 (lower is better) Translates to: EILVVHAVEGLRTHP*QQHAHLADVVEGQH Trigger: GTGCTGTCCTTCTACAACGTCTGCCAGATGGGCGTGCTGCTGGCAGGGGTGGGTACGCAAGCCTTCTACAGCATGGACCACAAGGATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR CCA 90 bp | TGTTGTCAAAATACTGGAAGAGGGCCAGGAAGAGGTGGTCACTCATaGCATCGATGTGCGAGCACGGCACGCCCTTCACCAGCTGCCCGG | + |
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Preference number: 1 (lower is better) Translates to: CCQNTGRGPGRGGHS*HRCASTARPSPAAR Trigger: CCGGGCAGCTGGTGAAGGGCGTGCCGTGCTCGCACATCGATGCCATGAGTGACCACCTCTTCCTGGCCCTCTTCCAGTATTTTGACAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR CCA 90 bp | AGCGGCCCAGGCTCTGGGGGAGATCCCTCTCTCAATGAAGGAGGCTaGCAAGTGGCACAGGAGGTGTCCCACAATGTCCACAGTGTATTC | + |
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Preference number: 1 (lower is better) Translates to: SGPGSGGDPSLNEGG*QVAQEVSHNVHSVF Trigger: GAATACACTGTGGACATTGTGGGACACCTCCTGTGCCACTTGCCAGCCTCCTTCATTGAGAGAGGGATCTCCCCCAGAGCCTGGGCCGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR GCA 90 bp | CACCCAACATACATCAAGCCCGGAATCATGGGAACCTCTCCACCTTaGAGGGCAAGCCAAGGTTCAGAGAAGGGGAGTGGGAGTGGGGCT | + |
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Preference number: 1 (lower is better) Translates to: HPTYIKPGIMGTSPP*RASQGSEKGSGSGA Trigger: AGCCCCACTCCCACTCCCCTTCTCTGAACCTTGGCTTGCCCTGCAAGGTGGAGAGGTTCCCATGATTCCGGGCTTGATGTATGTTGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
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| 3UTR CCA 90 bp | CCGAGGACACCTTGCTGCTGGACAGGTGACAAATCAGACATATCCTaGGAAAGAGGGCTTCTCAGCACCTGCCAGAGATCCTTGTGGTCC | + |
|
Preference number: 1 (lower is better) Translates to: PRTPCCWTGDKSDIS*ERGLLSTCQRSLWS Trigger: GGACCACAAGGATCTCTGGCAGGTGCTGAGAAGCCCTCTTTCCCAGGATATGTCTGATTTGTCACCTGTCCAGCAGCAAGGTGTCCTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR CCA 90 bp | AGGGAGAAGTTGTTGTCAAAATACTGGAAGAGGGCCAGGAAGAGGTaGTCACTCATGGCATCGATGTGCGAGCACGGCACGCCCTTCACC | + |
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Preference number: 1 (lower is better) Translates to: REKLLSKYWKRARKR*SLMASMCEHGTPFT Trigger: GGTGAAGGGCGTGCCGTGCTCGCACATCGATGCCATGAGTGACCACCTCTTCCTGGCCCTCTTCCAGTATTTTGACAACAACTTCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR GCA 90 bp | GAAGTAGCATCTTCTGCTTCCATCAGCTTGCCGAGGACACCTTGCTaGTGGACAGGTGACAAATCAGACATATCCTGGGAAAGAGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: EVASSASISLPRTPC*WTGDKSDISWERGL Trigger: AAGCCCTCTTTCCCAGGATATGTCTGATTTGTCACCTGTCCAGCAGCAAGGTGTCCTCGGCAAGCTGATGGAAGCAGAAGATGCTACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR CCA 90 bp | AGATATCATCTGAAGAGGGAGTCACAACTCCATGACAACCAAAGGTaGGGTCAAAGCTGGGGCTCTCGTTACTGCTATTCTGAACAGACT | + |
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Preference number: 1 (lower is better) Translates to: RYHLKRESQLHDNQR*GQSWGSRYCYSEQT Trigger: AGTCTGTTCAGAATAGCAGTAACGAGAGCCCCAGCTTTGACCCCACCTTTGGTTGTCATGGAGTTGTGACTCCCTCTTCAGATGATATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR TCA 90 bp | GAGGACCTTGAAACTTCCCAGTATTTCCACGCCAAGCAATTGACCTaGTCTGGAGAAAGCAGGGAGAAGTTGTTGTCAAAATACTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: EDLETSQYFHAKQLT*SGESREKLLSKYWK Trigger: CTTCCAGTATTTTGACAACAACTTCTCCCTGCTTTCTCCAGATCAGGTCAATTGCTTGGCGTGGAAATACTGGGAAGTTTCAAGGTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR TCA 90 bp | GCATGGAGGACCTTGAAACTTCCCAGTATTTCCACGCCAAGCAATTaGCCTGATCTGGAGAAAGCAGGGAGAAGTTGTTGTCAAAATACT | + |
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Preference number: 1 (lower is better) Translates to: AWRTLKLPSISTPSN*PDLEKAGRSCCQNT Trigger: AGTATTTTGACAACAACTTCTCCCTGCTTTCTCCAGATCAGGTCAATTGCTTGGCGTGGAAATACTGGGAAGTTTCAAGGTCCTCCATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR GCA 90 bp | ACAATGTCCACAGTGTATTCATCAGCAATGACACCATCCAAGCACTaGTGCACCTTCCTGACGACCACACTCCTTTTGTCAGAATCTAAA | + |
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Preference number: 1 (lower is better) Translates to: TMSTVYSSAMTPSKH*CTFLTTTLLLSESK Trigger: TTTAGATTCTGACAAAAGGAGTGTGGTCGTCAGGAAGGTGCAGCAGTGCTTGGATGGTGTCATTGCTGATGAATACACTGTGGACATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR GCA 90 bp | GTGAATTCTGGGTCATACCCAGGGAATTTAAACACTGTCAACGTTTaGATCTTAAAACCACCTCAGGGATCTTTAAAAGACGTTAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: VNSGSYPGNLNTVNV*ILKPPQGSLKDVKG Trigger: TCCTTTAACGTCTTTTAAAGATCCCTGAGGTGGTTTTAAGATGCAAACGTTGACAGTGTTTAAATTCCCTGGGTATGACCCAGAATTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTCCCCACTGCTCCAGGAGCCTGACCCTCACCGCAGCCTTCTGCTCAGAGCTTTGCGTACCCACCCCTaGCAGCAGCACGCCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: RSPLLQEPDPHRSLLLRALRTHP*QQHAHL Trigger: CAGATGGGCGTGCTGCTGGCAGGGGTGGGTACGCAA...AGCTCTGAGCAGAAGGCTGCGGTGAGGGTCAGGCTCCTGGAGCAGTGGGGACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCCCACTGCTCCAGGAGCCTGACCCTCACCGCAGCCTTCTGCTCAGAGCTGCCTCTTACCCAGGCTaGTCAGAAACCGCACACAGC | + |
|
Preference number: 2 (lower is better) Translates to: RSPLLQEPDPHRSLLLRAASYPG*SETAHS Trigger: GCTGTGTGCGGTTTCTGATCAGCCTGGGTAAGAGGC...AGCTCTGAGCAGAAGGCTGCGGTGAGGGTCAGGCTCCTGGAGCAGTGGGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTCCCCACTGCTCCAGGAGCCTGACCCTCACCGCAGCCTTCTGCTCAGAGCTCAGCTTCTAAGACCATaGAGAGCAGCGGCCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: RSPLLQEPDPHRSLLLRAQLLRP*RAAAQA Trigger: AGCCTGGGCCGCTGCTCTGCATGGTCTTAGAAGCTG...AGCTCTGAGCAGAAGGCTGCGGTGAGGGTCAGGCTCCTGGAGCAGTGGGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTTGGGGACCCAGTGGAGGCTGGCCAGGTAGGGCTGGAACTCAGAGGATCACCGTGAGGGGAGGGTaGCCAAGAGGAATGGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: SCWGPSGGWPGRAGTQRITVRGG*PRGMVA Trigger: TGCCACCATTCCTCTTGGCCACCCTCCCCTCACGGT...GATCCTCTGAGTTCCAGCCCTACCTGGCCAGCCTCCACTGGGTCCCCAACAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163275.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTTGGGGACCCAGTGGAGGCTGGCCAGGTAGGGCTGGAACTCAGAGGATCAAGGAGGCTGGCAAGTaGCACAGGAGGTGTCCCACA | + |
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Preference number: 2 (lower is better) Translates to: SCWGPSGGWPGRAGTQRIKEAGK*HRRCPT Trigger: TGTGGGACACCTCCTGTGCCACTTGCCAGCCTCCTT...GATCCTCTGAGTTCCAGCCCTACCTGGCCAGCCTCCACTGGGTCCCCAACAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163275.2 |
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| 3UTR CAA 90 bp | TCTCAGCACCTGCCAGAGATCCTTGTGGTCCATGCTGTAGAAGGCTaGCGTACCCACCCCTGCCAGCAGCACGCCCATCTGGCAGACGTT | + |
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Preference number: 2 (lower is better) Translates to: SQHLPEILVVHAVEG*RTHPCQQHAHLADV Trigger: AACGTCTGCCAGATGGGCGTGCTGCTGGCAGGGGTGGGTACGCAAGCCTTCTACAGCATGGACCACAAGGATCTCTGGCAGGTGCTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR-3UTR TCA 90 bp | CGTACCCACCCCTGCCAGCAGCACGCCCATCTGGCAGACGTTGTAGAAGGACAGGAGAGGGATTCCAGCTaGCTGCTGGTCAGACCTACA | + |
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Preference number: 2 (lower is better) Translates to: RTHPCQQHAHLADVVEGQERDSS*LLVRPT Trigger: TGTAGGTCTGACCAGCAGTCAGCTGGAATCCCTCTC...CTGTCCTTCTACAACGTCTGCCAGATGGGCGTGCTGCTGGCAGGGGTGGGTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR-3UTR TCA 90 bp | CACGGCACGCCCTTCACCAGCTGCCCGGCACTCAGGAGCTCCTCTGGCCTTTCTATTTGGCAGACAAGATaGCAATCTGGCTTCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: HGTPFTSCPALRSSSGLSIWQTR*QSGFCP Trigger: GGGGCAGAAGCCAGATTGTCATCTTGTCTGCCAAAT...AGAAAGGCCAGAGGAGCTCCTGAGTGCCGGGCAGCTGGTGAAGGGCGTGCCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR-3UTR TCA 90 bp | TACAGCCAAGCCAAAGCGCCTGGGAGGCAGGCTCTCCTGTTGGGGACCCAGTGGTACCTCCGCGATGCCTaGAGTAGCATCTTCTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: YSQAKAPGRQALLLGTQWYLRDA*SSIFCF Trigger: GAAGCAGAAGATGCTACTTCAGGCATCGCGGAGGTA...CCACTGGGTCCCCAACAGGAGAGCCTGCCTCCCAGGCGCTTTGGCTTGGCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163275.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTGTTGGGGACCCAGTGGAGGCTGGCCAGGTAGGGCTGGAACTCAGAGGATCGAGCTAAGGTCCAGCTaGTCCAACTCACTCTCGCTG | + |
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Preference number: 2 (lower is better) Translates to: TCWGPSGGWPGRAGTQRIELRSS*SNSLSL Trigger: CAGCGAGAGTGAGTTGGAGCAGCTGGACCTTAGCTC...GATCCTCTGAGTTCCAGCCCTACCTGGCCAGCCTCCACTGGGTCCCCAACAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCCCACTGCTCCAGGAGCCTGACCCTCACCGCAGCCTTCTGCTCAGAGCTTCTGAAAGCAGCTTCTaGCTCTGCACACCTTCACCA | + |
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Preference number: 2 (lower is better) Translates to: RSPLLQEPDPHRSLLLRASESSF*LCTPSP Trigger: TGGTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGA...AGCTCTGAGCAGAAGGCTGCGGTGAGGGTCAGGCTCCTGGAGCAGTGGGGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163275.2 |
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| 3UTR-3UTR CCA 90 bp | CACGGCACGCCCTTCACCAGCTGCCCGGCACTCAGGAGCTCCTCTGGCCTTTCTATTCCAGCTGACTGCTaGTCAGACCTACAACTGCAT | + |
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Preference number: 2 (lower is better) Translates to: HGTPFTSCPALRSSSGLSIPADC*SDLQLH Trigger: ATGCAGTTGTAGGTCTGACCAGCAGTCAGCTGGAAT...AGAAAGGCCAGAGGAGCTCCTGAGTGCCGGGCAGCTGGTGAAGGGCGTGCCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR-3UTR CCA 90 bp | TACAGCCAAGCCAAAGCGCCTGGGAGGCAGGCTCTCCTGTTGGGGACCCAGTGGGACAAGATGACAATCTaGCTTCTGCCCCAGCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: YSQAKAPGRQALLLGTQWDKMTI*LLPQPV Trigger: TACAGGCTGGGGCAGAAGCCAGATTGTCATCTTGTC...CCACTGGGTCCCCAACAGGAGAGCCTGCCTCCCAGGCGCTTTGGCTTGGCTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163275.2 |
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| 3UTR CAA 90 bp | GCAGACAAGATGACAATCTGGCTTCTGCCCCAGCCTGTAACCTGGTaGAGGGTAGAGATGGCGCTGTGCACTGCATCGGAGGAGAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: ADKMTIWLLPQPVTW*RVEMALCTASEERD Trigger: ATCCCTCTCCTCCGATGCAGTGCACAGCGCCATCTCTACCCTCAACCAGGTTACAGGCTGGGGCAGAAGCCAGATTGTCATCTTGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR-3UTR TCA 90 bp | ACCTGTTGGGGACCCAGTGGAGGCTGGCCAGGTAGGGCTGGAACTCAGAGGATCGACAGCACCTTTTCCTaGGCCAAATATTTGGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: TCWGPSGGWPGRAGTQRIDSTFS*AKYLAD Trigger: GTCTGCCAAATATTTGGCTCAGGAAAAGGTGCTGTC...GATCCTCTGAGTTCCAGCCCTACCTGGCCAGCCTCCACTGGGTCCCCAACAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
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| 3UTR-3UTR TCA 90 bp | AACCTCTCCACCTTGCAGGGCAAGCCAAGGTTCAGAGAAGGGGAGTGGGAGTGGGCCAAGCAATTGACCTaGTCTGGAGAAAGCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: NLSTLQGKPRFREGEWEWAKQLT*SGESRE Trigger: CTCCCTGCTTTCTCCAGATCAGGTCAATTGCTTGGC...CCACTCCCACTCCCCTTCTCTGAACCTTGGCTTGCCCTGCAAGGTGGAGAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
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| 3UTR-3UTR TCA 90 bp | TACAGCCAAGCCAAAGCGCCTGGGAGGCAGGCTCTCCTGTTGGGGACCCAGTGGTCGTTACTGCTATTCTaGACAGACTCAAAGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: YSQAKAPGRQALLLGTQWSLLLF*TDSKTA Trigger: GGCTGTCTTTGAGTCTGTTCAGAATAGCAGTAACGA...CCACTGGGTCCCCAACAGGAGAGCCTGCCTCCCAGGCGCTTTGGCTTGGCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163275.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCCAGAGATCCTTGTGGTCCATGCTGTAGAAGGCTTGCGTACCCACCCCTGCGGGATTCCAGCTGACTaGTGGTCAGACCTACAACTG | + |
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Preference number: 2 (lower is better) Translates to: LPEILVVHAVEGLRTHPCGIPAD*WSDLQL Trigger: CAGTTGTAGGTCTGACCAGCAGTCAGCTGGAATCCC...GCAGGGGTGGGTACGCAAGCCTTCTACAGCATGGACCACAAGGATCTCTGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTCACCAGCTGCCCGGCACTCAGGAGCTCCTCTGGCCTTTCTGTGGTCTTTCAGGACACCTTGCTGCTaGACAGGTGACAAATCAGAC | + |
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Preference number: 2 (lower is better) Translates to: PSPAARHSGAPLAFLWSFRTPCC*TGDKSD Trigger: GTCTGATTTGTCACCTGTCCAGCAGCAAGGTGTCCT...GAAAGACCACAGAAAGGCCAGAGGAGCTCCTGAGTGCCGGGCAGCTGGTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTGCTCAGAGCTGAGAGCTGTACAGCTTCTAAGACCATGCAGAGCAGCGGCCGAGAGGGATTCCAGCTaGCTGCTGGTCAGACCTACA | + |
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Preference number: 2 (lower is better) Translates to: FCSELRAVQLLRPCRAAAERDSS*LLVRPT Trigger: TGTAGGTCTGACCAGCAGTCAGCTGGAATCCCTCTC...GGCCGCTGCTCTGCATGGTCTTAGAAGCTGTACAGCTCTCAGCTCTGAGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR-3UTR TCA 90 bp | AACCTCTCCACCTTGCAGGGCAAGCCAAGGTTCAGAGAAGGGGAGTGGGAGTGGATTTGGCAGACAAGATaGCAATCTGGCTTCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: NLSTLQGKPRFREGEWEWIWQTR*QSGFCP Trigger: GGGGCAGAAGCCAGATTGTCATCTTGTCTGCCAAAT...CCACTCCCACTCCCCTTCTCTGAACCTTGGCTTGCCCTGCAAGGTGGAGAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTGCTCAGAGCTGAGAGCTGTACAGCTTCTAAGACCATGCAGAGCAGCGGCCAGATCCCTCTCTCAATaGAGGAGGCTGGCAAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: FCSELRAVQLLRPCRAAARSLSQ*RRLASG Trigger: GCCACTTGCCAGCCTCCTTCATTGAGAGAGGGATCT...GGCCGCTGCTCTGCATGGTCTTAGAAGCTGTACAGCTCTCAGCTCTGAGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR-3UTR CCA 90 bp | AACCTCTCCACCTTGCAGGGCAAGCCAAGGTTCAGAGAAGGGGAGTGGGAGTGGAGAGGAATGGTGGCATaGAGGACCTTGAAACTTCCC | + |
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Preference number: 2 (lower is better) Translates to: NLSTLQGKPRFREGEWEWRGMVA*RTLKLP Trigger: GGGAAGTTTCAAGGTCCTCCATGCCACCATTCCTCT...CCACTCCCACTCCCCTTCTCTGAACCTTGGCTTGCCCTGCAAGGTGGAGAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGGAACTGAAGATGTACCTTTGAGAGCAGACACCCAACATACATCAAGCCCGCTCATGGCATCGATGTaGGAGCACGGCACGCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: VGTEDVPLRADTQHTSSPLMASM*EHGTPF Trigger: GAAGGGCGTGCCGTGCTCGCACATCGATGCCATGAG...CGGGCTTGATGTATGTTGGGTGTCTGCTCTCAAAGGTACATCTTCAGTTCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCAGAGATCCTTGTGGTCCATGCTGTAGAAGGCTTGCGTACCCACCCCTGATTCCAGCTGACTGCTaGTCAGACCTACAACTGCAT | + |
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Preference number: 2 (lower is better) Translates to: PARDPCGPCCRRLAYPPLIPADC*SDLQLH Trigger: ATGCAGTTGTAGGTCTGACCAGCAGTCAGCTGGAAT...CAGGGGTGGGTACGCAAGCCTTCTACAGCATGGACCACAAGGATCTCTGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTCACCAGCTGCCCGGCACTCAGGAGCTCCTCTGGCCTTTCTGTGGTCTTTCAAATCAGACATATCCTaGGAAAGAGGGCTTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PSPAARHSGAPLAFLWSFKSDIS*ERGLLS Trigger: GCTGAGAAGCCCTCTTTCCCAGGATATGTCTGATTT...GAAAGACCACAGAAAGGCCAGAGGAGCTCCTGAGTGCCGGGCAGCTGGTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCTCAGAGCTGAGAGCTGTACAGCTTCTAAGACCATGCAGAGCAGCGGCCACTCAGGAGCTCCTCTaGCCTTTCTGTGGTCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: FCSELRAVQLLRPCRAAATQELL*PFCGLS Trigger: GGAAAGACCACAGAAAGGCCAGAGGAGCTCCTGAGT...GGCCGCTGCTCTGCATGGTCTTAGAAGCTGTACAGCTCTCAGCTCTGAGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR CCA 90 bp | AACCTCTCCACCTTGCAGGGCAAGCCAAGGTTCAGAGAAGGGGAGTGGGAGTGGACACCCCAACCATCTTaGAAGCTGTTTGCTGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: NLSTLQGKPRFREGEWEWTPQPS*KLFAEG Trigger: TCCTTCAGCAAACAGCTTCCAAGATGGTTGGGGTGT...CCACTCCCACTCCCCTTCTCTGAACCTTGGCTTGCCCTGCAAGGTGGAGAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| 3UTR CAA 90 bp | GGTACCTCCGCGATGCCTGAAGTAGCATCTTCTGCTTCCATCAGCTaGCCGAGGACACCTTGCTGCTGGACAGGTGACAAATCAGACATA | + |
|
Preference number: 2 (lower is better) Translates to: GTSAMPEVASSASIS*PRTPCCWTGDKSDI Trigger: TATGTCTGATTTGTCACCTGTCCAGCAGCAAGGTGTCCTCGGCAAGCTGATGGAAGCAGAAGATGCTACTTCAGGCATCGCGGAGGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCACACTCCTTTTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCTTGCGTACCCACCCCTaGCAGCAGCACGCCCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: TTLLLSESKTKVSKRLLPLRTHP*QQHAHL Trigger: CAGATGGGCGTGCTGCTGGCAGGGGTGGGTACGCAA...GGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAAAAGGAGTGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGCTCAGAGCTGAGAGCTGTACAGCTTCTAAGACCATGCAGAGCAGCGGCCGACAAGATGACAATCTaGCTTCTGCCCCAGCCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: FCSELRAVQLLRPCRAAADKMTI*LLPQPV Trigger: TACAGGCTGGGGCAGAAGCCAGATTGTCATCTTGTC...GGCCGCTGCTCTGCATGGTCTTAGAAGCTGTACAGCTCTCAGCTCTGAGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGGGAACTGAAGATGTACCTTTGAGAGCAGACACCCAACATACATCAAGCCCGAGATCCCTCTCTCAATaGAGGAGGCTGGCAAGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: VGTEDVPLRADTQHTSSPRSLSQ*RRLASG Trigger: GCCACTTGCCAGCCTCCTTCATTGAGAGAGGGATCT...CGGGCTTGATGTATGTTGGGTGTCTGCTCTCAAAGGTACATCTTCAGTTCCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| 3UTR CAA 90 bp | ACACCATCCAAGCACTGCTGCACCTTCCTGACGACCACACTCCTTTaGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: TPSKHCCTFLTTTLL*SESKTKVSKRLLPR Trigger: CCTGGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAAAAGGAGTGTGGTCGTCAGGAAGGTGCAGCAGTGCTTGGATGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGGGAACTGAAGATGTACCTTTGAGAGCAGACACCCAACATACATCAAGCCCGTACCTCCGCGATGCCTaGAGTAGCATCTTCTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: VGTEDVPLRADTQHTSSPYLRDA*SSIFCF Trigger: GAAGCAGAAGATGCTACTTCAGGCATCGCGGAGGTA...CGGGCTTGATGTATGTTGGGTGTCTGCTCTCAAAGGTACATCTTCAGTTCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTTTTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCAGGCTGGCCAAGCAATTGACCTaGTCTGGAGAAAGCAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LLLSESKTKVSKRLLPRLAKQLT*SGESRE Trigger: CTCCCTGCTTTCTCCAGATCAGGTCAATTGCTTGGC...CAGCCTGGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAAAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTTTTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCAGGCTGGGGATTCCAGCTGACTaGTGGTCAGACCTACAACTG | + |
|
Preference number: 2 (lower is better) Translates to: LLLSESKTKVSKRLLPRLGIPAD*WSDLQL Trigger: CAGTTGTAGGTCTGACCAGCAGTCAGCTGGAATCCC...CAGCCTGGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAAAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTTTTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCAGGCTGGATCCTTGTGGTCCATaGTGTAGAAGGCTTGCGTAC | + |
|
Preference number: 2 (lower is better) Translates to: LLLSESKTKVSKRLLPRLDPCGP*CRRLAY Trigger: GTACGCAAGCCTTCTACAGCATGGACCACAAGGATC...CAGCCTGGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAAAAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCATACCCAGGGAATTTAAACACTGTCAACGTTTGCATCTTAAAACCACCTCAGGTGTCCATTCTGTCTaGTGGCCCAGGGATGCCACG | + |
|
Preference number: 2 (lower is better) Translates to: VIPREFKHCQRLHLKTTSGVHSV*WPRDAT Trigger: CGTGGCATCCCTGGGCCAGCAGACAGAATGGACACC...TGAGGTGGTTTTAAGATGCAAACGTTGACAGTGTTTAAATTCCCTGGGTATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCAGGCTGATCAGAACTCAGGAGCTCCTCTaGCCTTTCTGTGGTCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LSESKTKVSKRLLPRLIRTQELL*PFCGLS Trigger: GGAAAGACCACAGAAAGGCCAGAGGAGCTCCTGAGT...TCTGATCAGCCTGGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCATACCCAGGGAATTTAAACACTGTCAACGTTTGCATCTTAAAACCACCTCAACCGTGAGGGGAGGGTaGCCAAGAGGAATGGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: VIPREFKHCQRLHLKTTSTVRGG*PRGMVA Trigger: TGCCACCATTCCTCTTGGCCACCCTCCCCTCACGGT...TGAGGTGGTTTTAAGATGCAAACGTTGACAGTGTTTAAATTCCCTGGGTATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTTTTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCAGGCTGCCTACGAAGCTCCTTTaGCTTCAGGACTGTAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: LLLSESKTKVSKRLLPRLPTKLL*LQDCSI Trigger: AATGCTACAGTCCTGAAGGCAAAGGAGCTTCGTAGG...CAGCCTGGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAAAAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCAGGCTGATCAGAGACAGCACCTTTTCCTaGGCCAAATATTTGGCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LSESKTKVSKRLLPRLIRDSTFS*AKYLAD Trigger: GTCTGCCAAATATTTGGCTCAGGAAAAGGTGCTGTC...TCTGATCAGCCTGGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCAGGCTGATCAGATGGCATGGAGGACCTTaGAACTTCCCAGTATTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LSESKTKVSKRLLPRLIRWHGGP*NFPVFP Trigger: TGGAAATACTGGGAAGTTTCAAGGTCCTCCATGCCA...TCTGATCAGCCTGGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCAGGCTGATCAGACCTACGAAGCTCCTTTaGCTTCAGGACTGTAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: LSESKTKVSKRLLPRLIRPTKLL*LQDCSI Trigger: AATGCTACAGTCCTGAAGGCAAAGGAGCTTCGTAGG...TCTGATCAGCCTGGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCACACTCCTTTTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCGCAATTGACCTGATCTaGAGAAAGCAGGGAGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TTLLLSESKTKVSKRLLPAIDLI*RKQGEV Trigger: AACTTCTCCCTGCTTTCTCCAGATCAGGTCAATTGC...GGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAAAAGGAGTGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCATACCCAGGGAATTTAAACACTGTCAACGTTTGCATCTTAAAACCACCTCAAGGACACCTTGCTGCTaGACAGGTGACAAATCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: VIPREFKHCQRLHLKTTSRTPCC*TGDKSD Trigger: GTCTGATTTGTCACCTGTCCAGCAGCAAGGTGTCCT...TGAGGTGGTTTTAAGATGCAAACGTTGACAGTGTTTAAATTCCCTGGGTATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCATACCCAGGGAATTTAAACACTGTCAACGTTTGCATCTTAAAACCACCTCAAAGGAGCCAAGTCCTTaGTTGTCTCTGCTGTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: VIPREFKHCQRLHLKTTSKEPSP*LSLLSS Trigger: ACTGGACAGCAGAGACAACCAAGGACTTGGCTCCTT...TGAGGTGGTTTTAAGATGCAAACGTTGACAGTGTTTAAATTCCCTGGGTATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| 3UTR CCA 72 bp | GCCAAGCCAAAGCGCCTGGGAGGCAGGCTCTCCTGTTaGGGACCCAGTGGAGGCTGGCCAGGTAGGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: AKPKRLGGRLSC*GPSGGWPGRAG Trigger: TCCAGCCCTACCTGGCCAGCCTCCACTGGGTCCCCAACAGGAGAGCCTGCCTCCCAGGCGCTTTGGCTTGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163275.2 |
||
| 3UTR GCA 72 bp | GCATCGATGTGCGAGCACGGCACGCCCTTCACCAGCTaGCCGGCACTCAGGAGCTCCTCTGGCCTTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ASMCEHGTPFTS*PALRSSSGLSV Trigger: CACAGAAAGGCCAGAGGAGCTCCTGAGTGCCGGGCAGCTGGTGAAGGGCGTGCCGTGCTCGCACATCGATGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR CCA 72 bp | AGTGGGGCTGAGGCAGCTGTTGCTCTGTTCACCTGTTaGGGACCCAGTGGAGGCTGGCCAGGTAGGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SGAEAAVALFTC*GPSGGWPGRAG Trigger: TCCAGCCCTACCTGGCCAGCCTCCACTGGGTCCCCAACAGGTGAACAGAGCAACAGCTGCCTCAGCCCCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| 3UTR GCA 72 bp | GTTGTCTCTGCTGTCCAGTTCTCAGGAGGTCCCCACTaGTCCAGGAGCCTGACCCTCACCGCAGCCTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VVSAVQFSGGPH*SRSLTLTAAFC Trigger: GCAGAAGGCTGCGGTGAGGGTCAGGCTCCTGGAGCAGTGGGGACCTCCTGAGAACTGGACAGCAGAGACAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR CCA 72 bp | GTTGCTCTGTTCACCTGTTGGGGACCCAGTGGAGGCTaGCCAGGTAGGGCTGGAACTCAGAGGATCGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VALFTCWGPSGG*PGRAGTQRIGL Trigger: CAGACCGATCCTCTGAGTTCCAGCCCTACCTGGCCAGCCTCCACTGGGTCCCCAACAGGTGAACAGAGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| 3UTR GCA 72 bp | GGCTTCTCAGCACCTGCCAGAGATCCTTGTGGTCCATaGTGTAGAAGGCTTGCGTACCCACCCCTGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GFSAPARDPCGP*CRRLAYPPLPA Trigger: TGCTGGCAGGGGTGGGTACGCAAGCCTTCTACAGCATGGACCACAAGGATCTCTGGCAGGTGCTGAGAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCCAGAGATCCTTGTGGTCCATGCTGTAGAAGGCTTGCGTACCCACCCCTGCAGCCTGTAACCTGGTaGAGGGTAGAGATGGCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PARDPCGPCCRRLAYPPLQPVTW*RVEMAL Trigger: CAGCGCCATCTCTACCCTCAACCAGGTTACAGGCTG...CAGGGGTGGGTACGCAAGCCTTCTACAGCATGGACCACAAGGATCTCTGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGTTGGGGACCCAGTGGAGGCTGGCCAGGTAGGGCTGGAACTCAGAGGATCGTGGCATGGAGGACCTaGAAACTTCCCAGTATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TCWGPSGGWPGRAGTQRIVAWRT*KLPSIS Trigger: GGAAATACTGGGAAGTTTCAAGGTCCTCCATGCCAC...GATCCTCTGAGTTCCAGCCCTACCTGGCCAGCCTCCACTGGGTCCCCAACAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| 3UTR CCA 72 bp | GCCCTTCACCAGCTGCCCGGCACTCAGGAGCTCCTCTaGCCTTTCTGTGGTCTTTCCCAGAAACTCATACAG | + |
|
Preference number: 3 (lower is better) Translates to: ALHQLPGTQELL*PFCGLSQKLIQ Trigger: CTGTATGAGTTTCTGGGAAAGACCACAGAAAGGCCAGAGGAGCTCCTGAGTGCCGGGCAGCTGGTGAAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR CCA 72 bp | AATACTGGAAGAGGGCCAGGAAGAGGTGGTCACTCATaGCATCGATGTGCGAGCACGGCACGCCCTTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: NTGRGPGRGGHS*HRCASTARPSP Trigger: TGGTGAAGGGCGTGCCGTGCTCGCACATCGATGCCATGAGTGACCACCTCTTCCTGGCCCTCTTCCAGTATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR TCA 72 bp | GCGCTGTGCACTGCATCGGAGGAGAGGGATTCCAGCTaGCTGCTGGTCAGACCTACAACTGCATCTGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: ALCTASEERDSS*LLVRPTTASDR Trigger: TCTGTCAGATGCAGTTGTAGGTCTGACCAGCAGTCAGCTGGAATCCCTCTCCTCCGATGCAGTGCACAGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR GCA 72 bp | TGTAACCTGGTTGAGGGTAGAGATGGCGCTGTGCACTaGATCGGAGGAGAGGGATTCCAGCTGACTGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: CNLVEGRDGAVH*IGGEGFQLTAG Trigger: ACCAGCAGTCAGCTGGAATCCCTCTCCTCCGATGCAGTGCACAGCGCCATCTCTACCCTCAACCAGGTTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR GCA 72 bp | TACATCAAGCCCGGAATCATGGGAACCTCTCCACCTTaGAGGGCAAGCCAAGGTTCAGAGAAGGGGAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: YIKPGIMGTSPP*RASQGSEKGSG Trigger: CCCACTCCCCTTCTCTGAACCTTGGCTTGCCCTGCAAGGTGGAGAGGTTCCCATGATTCCGGGCTTGATGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| 3UTR CCA 72 bp | ACCGTGAGGGGAGGGTGGCCAAGAGGAATGGTGGCATaGAGGACCTTGAAACTTCCCAGTATTTCCACGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TVRGGWPRGMVA*RTLKLPSISTP Trigger: TGGCGTGGAAATACTGGGAAGTTTCAAGGTCCTCCATGCCACCATTCCTCTTGGCCACCCTCCCCTCACGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR GCA 72 bp | TGTGCACTGCATCGGAGGAGAGGGATTCCAGCTGACTaGTGGTCAGACCTACAACTGCATCTGACAGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CALHRRRGIPAD*WSDLQLHLTES Trigger: GCTCTCTGTCAGATGCAGTTGTAGGTCTGACCAGCAGTCAGCTGGAATCCCTCTCCTCCGATGCAGTGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR CCA 72 bp | AAGATGACAATCTGGCTTCTGCCCCAGCCTGTAACCTaGTTGAGGGTAGAGATGGCGCTGTGCACTGCATCG | + |
|
Preference number: 3 (lower is better) Translates to: KMTIWLLPQPVT*LRVEMALCTAS Trigger: CGATGCAGTGCACAGCGCCATCTCTACCCTCAACCAGGTTACAGGCTGGGGCAGAAGCCAGATTGTCATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCAGGCTGATCAGACAGCCTGTAACCTGGTaGAGGGTAGAGATGGCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSESKTKVSKRLLPRLIRQPVTW*RVEMAL Trigger: CAGCGCCATCTCTACCCTCAACCAGGTTACAGGCTG...TCTGATCAGCCTGGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCTCAGAGCTGAGAGCTGTACAGCTTCTAAGACCATGCAGAGCAGCGGCCAGCAGGGAGAAGTTGTaGTCAAAATACTGGAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: FCSELRAVQLLRPCRAAASREKL*SKYWKR Trigger: CCTCTTCCAGTATTTTGACAACAACTTCTCCCTGCT...GGCCGCTGCTCTGCATGGTCTTAGAAGCTGTACAGCTCTCAGCTCTGAGCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTTTTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCAGGCTGACCTTCACCAGCTTCTaGCAACACTCAACAGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLLSESKTKVSKRLLPRLTFTSF*QHSTGH Trigger: GTGGCCTGTTGAGTGTTGCAAGAAGCTGGTGAAGGT...CAGCCTGGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAAAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163275.2 |
||
| 3UTR TCA 72 bp | TTGAAGATATCATCTGAAGAGGGAGTCACAACTCCATaGCAACCAAAGGTGGGGTCAAAGCTGGGGCTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: LKISSEEGVTTP*QPKVGSKLGLS Trigger: CGAGAGCCCCAGCTTTGACCCCACCTTTGGTTGTCATGGAGTTGTGACTCCCTCTTCAGATGATATCTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR GCA 72 bp | ATACAGGAACAGGGCCTGGCTCCTACGAAGCTCCTTTaGCTTCAGGACTGTAGCATTGAATCGAGATTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: IQEQGLAPTKLL*LQDCSIESRFF Trigger: AAAGAATCTCGATTCAATGCTACAGTCCTGAAGGCAAAGGAGCTTCGTAGGAGCCAGGCCCTGTTCCTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGAACTGAAGATGTACCTTTGAGAGCAGACACCCAACATACATCAAGCCCGACGACCACACTCCTTTaGTCAGAATCTAAAACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VGTEDVPLRADTQHTSSPTTTLL*SESKTK Trigger: TTTGGTTTTAGATTCTGACAAAAGGAGTGTGGTCGT...CGGGCTTGATGTATGTTGGGTGTCTGCTCTCAAAGGTACATCTTCAGTTCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| 3UTR TCA 72 bp | TTAAAGGAAAATTGGTGGGAACTGAAGATGTACCTTTaGGAGCAGACACCCAACATACATCAAGCCCGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LKENWWELKMYL*EQTPNIHQARN Trigger: ATTCCGGGCTTGATGTATGTTGGGTGTCTGCTCTCAAAGGTACATCTTCAGTTCCCACCAATTTTCCTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| 3UTR GCA 72 bp | GGGTCATACCCAGGGAATTTAAACACTGTCAACGTTTaGATCTTAAAACCACCTCAGGGATCTTTAAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GSYPGNLNTVNV*ILKPPQGSLKD Trigger: GTCTTTTAAAGATCCCTGAGGTGGTTTTAAGATGCAAACGTTGACAGTGTTTAAATTCCCTGGGTATGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACGCAGCTGTGCCGAGCTaGGCTGCAGGCGCTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHAAVPS*AAGAGS Trigger: ACTCCCAGCGCCTGCAGCTCAGCTCGGCACAGCTGC...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | AGGTCCCCACTGCTCCAGGAGCCTGACCCTCACCGCAGCCTTCTGCTCAGAGCTCACTTGAGCATCTGGTaGAGAAGGACTTGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLQEPDPHRSLLLRAHLSIW*RRTWAR Trigger: CCTGGCCCAAGTCCTTCTCCACCAGATGCTCAAGTG...AGCTCTGAGCAGAAGGCTGCGGTGAGGGTCAGGCTCCTGGAGCAGTGGGGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTCAGAGCTGAGAGCTGTACAGCTTCTAAGACCATGCAGAGCAGCGGCCTTCTGGACGCCAGCCTaGAAGCCCCGGAGGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FCSELRAVQLLRPCRAAAFWTPA*KPRRRL Trigger: CAGCCGCCTCCGGGGCTTCCAGGCTGGCGTCCAGAA...GGCCGCTGCTCTGCATGGTCTTAGAAGCTGTACAGCTCTCAGCTCTGAGCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| 3UTR CAA 72 bp | CTGCCAGAGATCCTTGTGGTCCATGCTGTAGAAGGCTaGCGTACCCACCCCTGCCAGCAGCACGCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPEILVVHAVEG*RTHPCQQHAHL Trigger: CAGATGGGCGTGCTGCTGGCAGGGGTGGGTACGCAAGCCTTCTACAGCATGGACCACAAGGATCTCTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTTGCCGGAGGACCCTCTaGGCACCCTGCCCAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLCRRTL*APCPGP Trigger: AGGTCCTGGGCAGGGTGCTCAGAGGGTCCTCCGGCA...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACTGTGCCGAGCTGAGCTaGAGGCGCTGGGAGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHCAELS*RRWEWV Trigger: AACCCACTCCCAGCGCCTGCAGCTCAGCTCGGCACA...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTTTCTGGACGCCAGCCTaGAAGCCCCGGAGGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLFWTPA*KPRRRL Trigger: CAGCCGCCTCCGGGGCTTCCAGGCTGGCGTCCAGAA...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTCATGGCATCGATGTaGGAGCACGGCACGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHLMASM*EHGTPF Trigger: GAAGGGCGTGCCGTGCTCGCACATCGATGCCATGAG...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACGGTGTCCATTCTGTCTaGTGGCCCAGGGATGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHGVHSV*WPRDAT Trigger: CGTGGCATCCCTGGGCCAGCAGACAGAATGGACACC...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACGCCCTCTGGAGGCTCTaGAGCTGTGCCGAGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGKGLPRLKAASDSAHLHALWRL*SCAELS Trigger: GCTCAGCTCGGCACAGCTGCAGAGCCTCCAGAGGGC...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACGGACTTGGGCCAGGGTaGCATCCAGCAGCTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHGLGPG*HPAAPN Trigger: GTTTGGAGCTGCTGGATGCCACCCTGGCCCAAGTCC...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACTTGGCCTTGAGCTTCTaGACGCCAGCCTGGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHLALSF*TPAWKP Trigger: GGGCTTCCAGGCTGGCGTCCAGAAGCTCAAGGCCAA...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACACCGTGAGGGGAGGGTaGCCAAGAGGAATGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHTVRGG*PRGMVA Trigger: TGCCACCATTCCTCTTGGCCACCCTCCCCTCACGGT...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTGGCAGGCTCTCCTGTTaGGGACCCAGTGGAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLGRLSC*GPSGGW Trigger: CCAGCCTCCACTGGGTCCCCAACAGGAGAGCCTGCC...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACTTGCGTACCCACCCCTaGCAGCAGCACGCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGKGLPRLKAASDSAHLHLRTHP*QQHAHL Trigger: CAGATGGGCGTGCTGCTGGCAGGGGTGGGTACGCAA...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTTCAGGAGGTCCCCACTaGTCCAGGAGCCTGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLSGGPH*SRSLTL Trigger: GAGGGTCAGGCTCCTGGAGCAGTGGGGACCTCCTGA...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | AACCTCTCCACCTTGCAGGGCAAGCCAAGGTTCAGAGAAGGGGAGTGGGAGTGGCACTTGAGCATCTGGTaGAGAAGGACTTGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLSTLQGKPRFREGEWEWHLSIW*RRTWAR Trigger: CCTGGCCCAAGTCCTTCTCCACCAGATGCTCAAGTG...CCACTCCCACTCCCCTTCTCTGAACCTTGGCTTGCCCTGCAAGGTGGAGAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTCAGAGCTGAGAGCTGTACAGCTTCTAAGACCATGCAGAGCAGCGGCCTTGGCCTTGAGCTTCTaGACGCCAGCCTGGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FCSELRAVQLLRPCRAAALALSF*TPAWKP Trigger: GGGCTTCCAGGCTGGCGTCCAGAAGCTCAAGGCCAA...GGCCGCTGCTCTGCATGGTCTTAGAAGCTGTACAGCTCTCAGCTCTGAGCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTGGACCCAGTGGAGGCTaGCCAGGTAGGGCTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLGPSGG*PGRAGT Trigger: AGTTCCAGCCCTACCTGGCCAGCCTCCACTGGGTCC...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR TCA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACCCAGGTGTGCTTCCATaGCTGCCTGCAGGCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGKGLPRLKAASDSAHLHPGVLP*LPAGWE Trigger: TTCCCAGCCTGCAGGCAGTCATGGAAGCACACCTGG...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR TCA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACTTCACACCAGGGCTCTaGAGGGCCTCGTCCCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SGKGLPRLKAASDSAHLHFTPGL*RASSRM Trigger: CATTCGGGACGAGGCCCTTCAGAGCCCTGGTGTGAA...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACGATCCTCTCCAGAAATaGCTGGGCCAGTTCAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHDPLQK*LGQFRG Trigger: ACCCCTGAACTGGCCCAGGCATTTCTGGAGAGGATC...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACGTGGGTTACAGAGGCTaGATTCTGAGGACCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHVGYRG*ILRTQG Trigger: TCCCTGGGTCCTCAGAATGCAGCCTCTGTAACCCAC...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS-3UTR CCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTGGACTTGGGCCAGGGTaGCATCCAGCAGCTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLGLGPG*HPAAPN Trigger: GTTTGGAGCTGCTGGATGCCACCCTGGCCCAAGTCC...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCACTTGAGCATCTGGTaGAGAAGGACTTGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHHLSIW*RRTWAR Trigger: CCTGGCCCAAGTCCTTCTCCACCAGATGCTCAAGTG...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTTTTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCAGGCTGTTCTGGACGCCAGCCTaGAAGCCCCGGAGGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSESKTKVSKRLLPRLFWTPA*KPRRRL Trigger: CAGCCGCCTCCGGGGCTTCCAGGCTGGCGTCCAGAA...CAGCCTGGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAAAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCCAAGCCAAAGCGCCTaGGAGGCAGGCTCTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLPSQSA*EAGSPV Trigger: AACAGGAGAGCCTGCCTCCCAGGCGCTTTGGCTTGG...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| 3UTR CAA 72 bp | ATGACAATCTGGCTTCTGCCCCAGCCTGTAACCTGGTaGAGGGTAGAGATGGCGCTGTGCACTGCATCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MTIWLLPQPVTW*RVEMALCTASE Trigger: CTCCGATGCAGTGCACAGCGCCATCTCTACCCTCAACCAGGTTACAGGCTGGGGCAGAAGCCAGATTGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| 3UTR CAA 72 bp | TCTTGCAACACTCAACAGGCCACTCGGCATCAGGACTaGGCCGTCAGAAGCAGCAGGGTACAGCCAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SCNTQQATRHQD*AVRSSRVQPSQ Trigger: TTGGCTTGGCTGTACCCTGCTGCTTCTGACGGCCAAGTCCTGATGCCGAGTGGCCTGTTGAGTGTTGCAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163275.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACGCAGGCTGGGAATGGTaGAGGCCACATTCTTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHAGWEW*RPHSLS Trigger: ACTCAAAGAATGTGGCCTTCACCATTCCCAGCCTGC...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR TCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACTACCTCCGCGATGCCTaGAGTAGCATCTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHYLRDA*SSIFCF Trigger: GAAGCAGAAGATGCTACTTCAGGCATCGCGGAGGTA...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR TCA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACGCCTCTTACCCAGGCTaGTCAGAAACCGCACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGKGLPRLKAASDSAHLHASYPG*SETAHS Trigger: GCTGTGTGCGGTTTCTGATCAGCCTGGGTAAGAGGC...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR TCA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACACAGAGGCTGCATTCTaGGGACCCAGGGAAGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: SGKGLPRLKAASDSAHLHTEAAF*GPREAI Trigger: GATCGCTTCCCTGGGTCCTCAGAATGCAGCCTCTGT...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACATGGCGGTGTGGAACTaGTGGTTATCAGTAGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHMAVWN*WLSVAL Trigger: GAGGGCTACTGATAACCAGCAGTTCCACACCGCCAT...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACTTAAAGGCATCCTCGTaGAGGTCCTGGGGTAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHLKASS*RSWGSL Trigger: AAGGCTACCCCAGGACCTGCACGAGGATGCCTTTAA...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCAGCTTCTAAGACCATaGAGAGCAGCGGCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLQLLRP*RAAAQA Trigger: AGCCTGGGCCGCTGCTCTGCATGGTCTTAGAAGCTG...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACAAGTGTCCTCCTCCATaGAGAGAAGAACCTCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHKCPPP*REEPRG Trigger: ACCCCGAGGTTCTTCTCTGCATGGAGGAGGACACTT...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTAAGGAGGCTGGCAAGTaGCACAGGAGGTGTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLKEAGK*HRRCPT Trigger: TGTGGGACACCTCCTGTGCCACTTGCCAGCCTCCTT...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTGAGAGGGATTCCAGCTaGCTGCTGGTCAGACCTACA | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLERDSS*LLVRPT Trigger: TGTAGGTCTGACCAGCAGTCAGCTGGAATCCCTCTC...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR TCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACATTTGGCAGACAAGATaGCAATCTGGCTTCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHIWQTR*QSGFCP Trigger: GGGGCAGAAGCCAGATTGTCATCTTGTCTGCCAAAT...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTAGATCCCTCTCTCAATaGAGGAGGCTGGCAAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLRSLSQ*RRLASG Trigger: GCCACTTGCCAGCCTCCTTCATTGAGAGAGGGATCT...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACAATGGATGTAAATCCTaGCTGGGGCTTGGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHNGCKS*LGLGSL Trigger: GAGAGAGCCAAGCCCCAGGCAGGATTTACATCCATT...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACTCTGTGGGACAGGTCTaGAGTCCAGACATGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: SGKGLPRLKAASDSAHLHSVGQV*SPDMGP Trigger: AGGTCCCATGTCTGGACTGCAGACCTGTCCCACAGA...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTTCTGTAATGTCTGGCTaGAGGAAGCTGCCGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLSVMSG*RKLPED Trigger: GTCCTCCGGCAGCTTCCTGCAGCCAGACATTACAGA...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCCATCCAAGCACTGCTaGACCTTCCTGACGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLPSKHC*TFLTTT Trigger: TGTGGTCGTCAGGAAGGTGCAGCAGTGCTTGGATGG...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACCTCACCGCAGCCTTCTaGTCAGAGCTGAGAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGKGLPRLKAASDSAHLHLTAAF*SELRAV Trigger: TACAGCTCTCAGCTCTGAGCAGAAGGCTGCGGTGAG...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTGAGCTAAGGTCCAGCTaGTCCAACTCACTCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLELRSS*SNSLSL Trigger: CAGCGAGAGTGAGTTGGAGCAGCTGGACCTTAGCTC...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACAGGACACCTTGCTGCTaGACAGGTGACAAATCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHRTPCC*TGDKSD Trigger: GTCTGATTTGTCACCTGTCCAGCAGCAAGGTGTCCT...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| 3UTR CAA 72 bp | GCGATGCCTGAAGTAGCATCTTCTGCTTCCATCAGCTaGCCGAGGACACCTTGCTGCTGGACAGGTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: AMPEVASSASIS*PRTPCCWTGDK Trigger: TTTGTCACCTGTCCAGCAGCAAGGTGTCCTCGGCAAGCTGATGGAAGCAGAAGATGCTACTTCAGGCATCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTGCCAAGCAATTGACCTaGTCTGGAGAAAGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLAKQLT*SGESRE Trigger: CTCCCTGCTTTCTCCAGATCAGGTCAATTGCTTGGC...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTGGCAAGTCCCAAACCTaGATTGCCTTCTCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLGKSQT*IAFSFR Trigger: CCTGAAGGAGAAGGCAATTCAGGTTTGGGACTTGCC...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTGGGATTCCAGCTGACTaGTGGTCAGACCTACAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLGIPAD*WSDLQL Trigger: CAGTTGTAGGTCTGACCAGCAGTCAGCTGGAATCCC...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCCTACGAAGCTCCTTTaGCTTCAGGACTGTAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHPTKLL*LQDCSI Trigger: AATGCTACAGTCCTGAAGGCAAAGGAGCTTCGTAGG...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACGTCCTTGGTTGTCTCTaGTGTCCAGTTCTCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGKGLPRLKAASDSAHLHVLGCL*CPVLRR Trigger: CCTCCTGAGAACTGGACAGCAGAGACAACCAAGGAC...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCCAGAAGGCATTTCATaGCGGTGTGGAACTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLPEGIS*RCGTAG Trigger: ACCAGCAGTTCCACACCGCCATGAAATGCCTTCTGG...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | CTCCTTTTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCAGGCTGTTGGCCTTGAGCTTCTaGACGCCAGCCTGGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSESKTKVSKRLLPRLLALSF*TPAWKP Trigger: GGGCTTCCAGGCTGGCGTCCAGAAGCTCAAGGCCAA...CAGCCTGGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAAAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACATTCCAGCTGACTGCTaGTCAGACCTACAACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHIPADC*SDLQLH Trigger: ATGCAGTTGTAGGTCTGACCAGCAGTCAGCTGGAAT...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTACTCAGGAGCTCCTCTaGCCTTTCTGTGGTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLTQELL*PFCGLS Trigger: GGAAAGACCACAGAAAGGCCAGAGGAGCTCCTGAGT...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACACACCCCAACCATCTTaGAAGCTGTTTGCTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHTPQPS*KLFAEG Trigger: TCCTTCAGCAAACAGCTTCCAAGATGGTTGGGGTGT...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCATGACAACCAAAGGTaGGGTCAAAGCTGGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLHDNQR*GQSWGS Trigger: AGAGCCCCAGCTTTGACCCCACCTTTGGTTGTCATG...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| 3UTR CAA 72 bp | AAGCAGCTTCTGACTCTGCACACCTTCACCAGCTTCTaGCAACACTCAACAGGCCACTCGGCATCAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: KQLLTLHTFTSF*QHSTGHSASGL Trigger: AAGTCCTGATGCCGAGTGGCCTGTTGAGTGTTGCAAGAAGCTGGTGAAGGTGTGCAGAGTCAGAAGCTGCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163275.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACTGTATTCATCAGCAATaGCACCATCCAAGCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHCIHQQ*HHPSTA Trigger: AGCAGTGCTTGGATGGTGTCATTGCTGATGAATACA...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTGATCCTTGTGGTCCATaGTGTAGAAGGCTTGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLDPCGP*CRRLAY Trigger: GTACGCAAGCCTTCTACAGCATGGACCACAAGGATC...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTGTCCCAAACCTGAATTaGCTTCTCCTTCAGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLVPNLN*LLLQGH Trigger: ATGGCCCTGAAGGAGAAGGCAATTCAGGTTTGGGAC...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTGATGTAAATCCTGCCTaGGGCTTGGCTCTCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLDVNPA*GLALSD Trigger: ATCAGAGAGAGCCAAGCCCCAGGCAGGATTTACATC...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCATTTCATGGCGGTGTaGAACTGCTGGTTATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHHFMAV*NCWLSV Trigger: TACTGATAACCAGCAGTTCCACACCGCCATGAAATG...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACGACAAGATGACAATCTaGCTTCTGCCCCAGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGKGLPRLKAASDSAHLHDKMTI*LLPQPV Trigger: TACAGGCTGGGGCAGAAGCCAGATTGTCATCTTGTC...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACAAATCAGACATATCCTaGGAAAGAGGGCTTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHKSDIS*ERGLLS Trigger: GCTGAGAAGCCCTCTTTCCCAGGATATGTCTGATTT...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTAGAGGAATGGTGGCATaGAGGACCTTGAAACTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLRGMVA*RTLKLP Trigger: GGGAAGTTTCAAGGTCCTCCATGCCACCATTCCTCT...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTAAGGAGCCAAGTCCTTaGTTGTCTCTGCTGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLKEPSP*LSLLSS Trigger: ACTGGACAGCAGAGACAACCAAGGACTTGGCTCCTT...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTGGATTTAGCCTGTCCTaGTGTCCATTCTGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLGFSLS*CPFCLL Trigger: CAGCAGACAGAATGGACACCAGGACAGGCTAAATCC...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR TCA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACGAAGGCCACATTCTTTaGGTTCAGATAGGCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGKGLPRLKAASDSAHLHEGHIL*VQIGKD Trigger: GTCCTTGCCTATCTGAACTCAAAGAATGTGGCCTTC...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTGACAGCACCTTTTCCTaGGCCAAATATTTGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLDSTFS*AKYLAD Trigger: GTCTGCCAAATATTTGGCTCAGGAAAAGGTGCTGTC...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTTGGCATGGAGGACCTTaGAACTTCCCAGTATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLWHGGP*NFPVFP Trigger: TGGAAATACTGGGAAGTTTCAAGGTCCTCCATGCCA...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACGAGGTCTTTGAACACTaGGGACAGGTTCTTAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGKGLPRLKAASDSAHLHEVFEH*GQVLKG Trigger: GCCTTTAAGAACCTGTCCGCAGTGTTCAAAGACCTC...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| 3UTR CAA 72 bp | CTGAGAAAAACGCTAAGAAAGGAGCCAAGTCCTTGGTaGTCTCTGCTGTCCAGTTCTCAGGAGGTCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LRKTLRKEPSPW*SLLSSSQEVPT Trigger: AGTGGGGACCTCCTGAGAACTGGACAGCAGAGACAACCAAGGACTTGGCTCCTTTCTTAGCGTTTTTCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACTTGGAAGCTGTTTGCTaGAGGATTTCAGGAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHLEAVC*RISGNF Trigger: AAAGTTTCCTGAAATCCTTCAGCAAACAGCTTCCAA...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTTCGTTACTGCTATTCTaGACAGACTCAAAGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLSLLLF*TDSKTA Trigger: GGCTGTCTTTGAGTCTGTTCAGAATAGCAGTAACGA...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR TCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCACTGCCCTGAATTCTaGGGTCTTTATAAGTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHHCPEF*GLYKLY Trigger: ATACAACTTATAAAGACCTCAGAATTCAGGGCAGTG...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACTCTTCCGCCATTTTCTaGAACAATGGATGTAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHSSAIF*NNGCKS Trigger: GGATTTACATCCATTGTTGCAGAAAATGGCGGAAGA...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACTCTTCAAGAAATGCCTaGAGAATGGATTTAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKGLPRLKAASDSAHSSRNA*RMDLAC Trigger: ACAGGCTAAATCCATTCTGCAGGCATTTCTTGAAGA...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTTTGTTGTCAAAATACTaGAAGAGGGCCAGGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLLLSKY*KRARKR Trigger: CCTCTTCCTGGCCCTCTTCCAGTATTTTGACAACAA...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTGCAATTGACCTGATCTaGAGAAAGCAGGGAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLAIDLI*RKQGEV Trigger: AACTTCTCCCTGCTTTCTCCAGATCAGGTCAATTGC...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| 3UTR CAA 72 bp | AAGCACTGCTGCACCTTCCTGACGACCACACTCCTTTaGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KHCCTFLTTTLL*SESKTKVSKRL Trigger: GAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAAAAGGAGTGTGGTCGTCAGGAAGGTGCAGCAGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTTTTGTGGCAACAGTGTaGAGTTCATCTCCTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLFVATV*SSSPEK Trigger: TTTCTCAGGAGATGAACTGCACACTGTTGCCACAAA...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACTTTCAGGAAACTTTGTaGCAACAGTGTGCAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGKGLPRLKAASDSAHLHFQETL*QQCAVH Trigger: ATGAACTGCACACTGTTGCCACAAAGTTTCCTGAAA...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTGGTGAACCATGTATCTaGCCAAAATCCATAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLGEPCI*PKSITF Trigger: AAAAGTTATGGATTTTGGGCAGATACATGGTTCACC...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCCCAAATACAACTTCTaGTTTCTTCTTAAATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSGKGLPRLKAASDSAHLPKYNF*FLLKSS Trigger: GCTGGATTTAAGAAGAAAGCAGAAGTTGTATTTGGG...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| 3UTR CAA 72 bp | GTTAAAGGAAAATTGGTGGGAACTGAAGATGTACCTTaGAGAGCAGACACCCAACATACATCAAGCCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKGKLVGTEDVP*RADTQHTSSPE Trigger: TTCCGGGCTTGATGTATGTTGGGTGTCTGCTCTCAAAGGTACATCTTCAGTTCCCACCAATTTTCCTTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| 3UTR CAA 72 bp | TGGGTCATACCCAGGGAATTTAAACACTGTCAACGTTaGCATCTTAAAACCACCTCAGGGATCTTTAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVIPREFKHCQR*HLKTTSGIFKR Trigger: TCTTTTAAAGATCCCTGAGGTGGTTTTAAGATGCAAACGTTGACAGTGTTTAAATTCCCTGGGTATGACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| CDS CCA 90 bp | ACGCCAGCCTGGAAGCCCCGGAGGCGGCTGCACTTGAGCATCTGGTaGAGAAGGACTTGGGCCAGGGTGGCATCCAGCAGCTCCAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: TPAWKPRRRLHLSIW*RRTWARVASSSSKP Trigger: TGGTTTGGAGCTGCTGGATGCCACCCTGGCCCAAGTCCTTCTCCACCAGATGCTCAAGTGCAGCCGCCTCCGGGGCTTCCAGGCTGGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS CCA 90 bp | TGGACGCCAGCCTGGAAGCCCCGGAGGCGGCTGCACTTGAGCATCTaGTGGAGAAGGACTTGGGCCAGGGTGGCATCCAGCAGCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: WTPAWKPRRRLHLSI*WRRTWARVASSSSK Trigger: TTTGGAGCTGCTGGATGCCACCCTGGCCCAAGTCCTTCTCCACCAGATGCTCAAGTGCAGCCGCCTCCGGGGCTTCCAGGCTGGCGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS CCA 90 bp | GTAGCAATGTCCAAGAGGTTGGCCTTGAGCTTCTGGACGCCAGCCTaGAAGCCCCGGAGGCGGCTGCACTTGAGCATCTGGTGGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VAMSKRLALSFWTPA*KPRRRLHLSIWWRR Trigger: CCTTCTCCACCAGATGCTCAAGTGCAGCCGCCTCCGGGGCTTCCAGGCTGGCGTCCAGAAGCTCAAGGCCAACCTCTTGGACATTGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACAGGCAGGCTCTCCTGTaGGGGACCCAGTGGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSSGKGLPRLKAASDSAHRQALL*GTQWRL Trigger: CAGCCTCCACTGGGTCCCCAACAGGAGAGCCTGCCT...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CAA 90 bp | AACCTCTCCACCTTGCAGGGCAAGCCAAGGTTCAGAGAAGGGGAGTGGGAGTGGTCCAAGAGGTTGGCCTaGAGCTTCTGGACGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NLSTLQGKPRFREGEWEWSKRLA*SFWTPA Trigger: GGCTGGCGTCCAGAAGCTCAAGGCCAACCTCTTGGA...CCACTCCCACTCCCCTTCTCTGAACCTTGGCTTGCCCTGCAAGGTGGAGAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
||
| CDS TCA 90 bp | CGTTCCAACGTGATGAGAAAGAGGCTGCGGTTCACACCAGGGCTCTaGAGGGCCTCGTCCCGAATGTCTCCCAAGTTGATGACGACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSNVMRKRLRFTPGL*RASSRMSPKLMTTS Trigger: GGACGTCGTCATCAACTTGGGAGACATTCGGGACGAGGCCCTTCAGAGCCCTGGTGTGAACCGCAGCCTCTTTCTCATCACGTTGGAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS CCA 90 bp | TGGCGCTGTGCACTGCATCGGAGGAGAGGGATTCCAGCTGACTGCTaGTCAGACCTACAACTGCATCTGACAGAGAGCCTAGGGTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: WRCALHRRRGIPADC*SDLQLHLTESLGSR Trigger: ACGAGACCCTAGGCTCTCTGTCAGATGCAGTTGTAGGTCTGACCAGCAGTCAGCTGGAATCCCTCTCCTCCGATGCAGTGCACAGCGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CAA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCTGGTGGAGAAGGACTaGGGCCAGGGTGGCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSGKGLPRLKAASDSAHLLVEKD*GQGGIQ Trigger: CTGGATGCCACCCTGGCCCAAGTCCTTCTCCACCAG...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 |
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| CDS-3UTR CAA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACCTGGTGGAGAAGGACTaGGGCCAGGGTGGCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGKGLPRLKAASDSAHLHLVEKD*GQGGIQ Trigger: CTGGATGCCACCCTGGCCCAAGTCCTTCTCCACCAG...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 |
||
| CDS TCA 90 bp | GTAGAGATGGCGCTGTGCACTGCATCGGAGGAGAGGGATTCCAGCTaGCTGCTGGTCAGACCTACAACTGCATCTGACAGAGAGCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VEMALCTASEERDSS*LLVRPTTASDREPR Trigger: CCTAGGCTCTCTGTCAGATGCAGTTGTAGGTCTGACCAGCAGTCAGCTGGAATCCCTCTCCTCCGATGCAGTGCACAGCGCCATCTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS GCA 90 bp | AGATGGCGCTGTGCACTGCATCGGAGGAGAGGGATTCCAGCTGACTaGTGGTCAGACCTACAACTGCATCTGACAGAGAGCCTAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RWRCALHRRRGIPAD*WSDLQLHLTESLGS Trigger: AGACCCTAGGCTCTCTGTCAGATGCAGTTGTAGGTCTGACCAGCAGTCAGCTGGAATCCCTCTCCTCCGATGCAGTGCACAGCGCCATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS CCA 90 bp | AGCACCCTGCCCAGGACCTCCACACACTCCAAGGCATTCAGCACCTaGAAACAGCGTTCCAACGTGATGAGAAAGAGGCTGCGGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: STLPRTSTHSKAFST*KQRSNVMRKRLRFT Trigger: TGTGAACCGCAGCCTCTTTCTCATCACGTTGGAACGCTGTTTCCAGGTGCTGAATGCCTTGGAGTGTGTGGAGGTCCTGGGCAGGGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACTCCAAGAGGTTGGCCTaGAGCTTCTGGACGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGKGLPRLKAASDSAHLHSKRLA*SFWTPA Trigger: GGCTGGCGTCCAGAAGCTCAAGGCCAACCTCTTGGA...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 |
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| CDS-3UTR CAA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACGCAATGTCCAAGAGGTaGGCCTTGAGCTTCTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: GSSGKGLPRLKAASDSAHAMSKR*ALSFWT Trigger: CGTCCAGAAGCTCAAGGCCAACCTCTTGGACATTGC...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 |
||
| CDS GCA 90 bp | TGGCCCCATTTGTCTTCCAGAAGGCATTTCATGGCGGTGTGGAACTaGTGGTTATCAGTAGCCCTCAGGTCCTCCAGCAGCTTCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WPHLSSRRHFMAVWN*WLSVALRSSSSFCG Trigger: GCCACAGAAGCTGCTGGAGGACCTGAGGGCTACTGATAACCAGCAGTTCCACACCGCCATGAAATGCCTTCTGGAAGACAAATGGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
||
| CDS CCA 90 bp | CCCCATTTGTCTTCCAGAAGGCATTTCATGGCGGTGTGGAACTGCTaGTTATCAGTAGCCCTCAGGTCCTCCAGCAGCTTCTGTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHLSSRRHFMAVWNC*LSVALRSSSSFCGW Trigger: CCAGCCACAGAAGCTGCTGGAGGACCTGAGGGCTACTGATAACCAGCAGTTCCACACCGCCATGAAATGCCTTCTGGAAGACAAATGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
||
| CDS CCA 90 bp | TCCAGGTGGCCCCATTTGTCTTCCAGAAGGCATTTCATGGCGGTGTaGAACTGCTGGTTATCAGTAGCCCTCAGGTCCTCCAGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRWPHLSSRRHFMAV*NCWLSVALRSSSSF Trigger: GAAGCTGCTGGAGGACCTGAGGGCTACTGATAACCAGCAGTTCCACACCGCCATGAAATGCCTTCTGGAAGACAAATGGGGCCACCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS CCA 90 bp | TTGAACACTGCGGACAGGTTCTTAAAGGCATCCTCGTGCAGGTCCTaGGGTAGCCTTTCTGTAATGTCTGGCTGCAGGAAGCTGCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LNTADRFLKASSCRS*GSLSVMSGCRKLPE Trigger: CTCCGGCAGCTTCCTGCAGCCAGACATTACAGAAAGGCTACCCCAGGACCTGCACGAGGATGCCTTTAAGAACCTGTCCGCAGTGTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CAA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTAATCCTGCCTGGGGCTaGGCTCTCTCTGATAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSGKGLPRLKAASDSAHLNPAWG*ALSDRH Trigger: GTGCCTATCAGAGAGAGCCAAGCCCCAGGCAGGATT...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS-3UTR CAA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCAGCCTGTAACCTGGTaGAGGGTAGAGATGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSGKGLPRLKAASDSAHLQPVTW*RVEMAL Trigger: CAGCGCCATCTCTACCCTCAACCAGGTTACAGGCTG...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS TCA 90 bp | TGGAACAGCGGATCCTCTCCAGAAATGCCTGGGCCAGTTCAGGGGTaGTGTCATACACCATGTCCAACTGCTTGGTGGCGTTGTCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: WNSGSSPEMPGPVQG*CHTPCPTAWWRCHS Trigger: GCTATGACAACGCCACCAAGCAGTTGGACATGGTGTATGACATCACCCCTGAACTGGCCCAGGCATTTCTGGAGAGGATCCGCTGTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS CCA 90 bp | TCCCGAATGTCTCCCAAGTTGATGACGACGTCCTCCAGATCCAGGTaGCCCCATTTGTCTTCCAGAAGGCATTTCATGGCGGTGTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SRMSPKLMTTSSRSR*PHLSSRRHFMAVWN Trigger: GTTCCACACCGCCATGAAATGCCTTCTGGAAGACAAATGGGGCCACCTGGATCTGGAGGACGTCGTCATCAACTTGGGAGACATTCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS-3UTR CAA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACGAGCCTAGGGTCTCGTaGAGGGTCTGGTTCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SGKGLPRLKAASDSAHLHEPRVS*RVWFSV Trigger: TACAGAGAACCAGACCCTCAACGAGACCCTAGGCTC...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS-3UTR CAA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACGTGGCATGGAGGACCTaGAAACTTCCCAGTATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSSGKGLPRLKAASDSAHVAWRT*KLPSIS Trigger: GGAAATACTGGGAAGTTTCAAGGTCCTCCATGCCAC...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS-3UTR CAA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTTCCGTGGACAGCTCTTaGAATACCTCACCAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSGKGLPRLKAASDSAHLSVDSS*NTSPGR Trigger: CCTGCCTGGTGAGGTATTCAAAGAGCTGTCCACGGA...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS TCA 90 bp | TTCCATGACTGCCTGCAGGCTGGGAATGGTGAAGGCCACATTCTTTaGGTTCAGATAGGCAAGGACTCTGTGGGACAGGTCTGCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FHDCLQAGNGEGHIL*VQIGKDSVGQVCSP Trigger: TGGACTGCAGACCTGTCCCACAGAGTCCTTGCCTATCTGAACTCAAAGAATGTGGCCTTCACCATTCCCAGCCTGCAGGCAGTCATGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS GCA 90 bp | GATGTTCCTCACGTCAAAGCTGGAACAGCGGATCCTCTCCAGAAATaGCTGGGCCAGTTCAGGGGTGATGTCATACACCATGTCCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: DVPHVKAGTADPLQK*LGQFRGDVIHHVQL Trigger: CAGTTGGACATGGTGTATGACATCACCCCTGAACTGGCCCAGGCATTTCTGGAGAGGATCCGCTGTTCCAGCTTTGACGTGAGGAACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS CCA 90 bp | CCTACAACTGCATCTGACAGAGAGCCTAGGGTCTCGTTGAGGGTCTaGTTCTCTGTAGCAATGTCCAAGAGGTTGGCCTTGAGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PTTASDREPRVSLRV*FSVAMSKRLALSFW Trigger: CCAGAAGCTCAAGGCCAACCTCTTGGACATTGCTACAGAGAACCAGACCCTCAACGAGACCCTAGGCTCTCTGTCAGATGCAGTTGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS-3UTR CAA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACTCCAGGTGGCCCCATTaGTCTTCCAGAAGGCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGKGLPRLKAASDSAHLHSRWPH*SSRRHF Trigger: GAAATGCCTTCTGGAAGACAAATGGGGCCACCTGGA...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS-3UTR CAA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCGAATGTCTCCCAAGTaGATGACGACGTCCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSGKGLPRLKAASDSAHLRMSPK*MTTSSR Trigger: TCTGGAGGACGTCGTCATCAACTTGGGAGACATTCG...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS-3UTR CAA 90 bp | CTCCTTTTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCAGGCTGTCCAAGAGGTTGGCCTaGAGCTTCTGGACGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLSESKTKVSKRLLPRLSKRLA*SFWTPA Trigger: GGCTGGCGTCCAGAAGCTCAAGGCCAACCTCTTGGA...CAGCCTGGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAAAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| CDS-3UTR CAA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACAGTCCCAAACCTGAATaGCCTTCTCCTTCAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGKGLPRLKAASDSAHLHSPKPE*PSPSGP Trigger: TGGCCCTGAAGGAGAAGGCAATTCAGGTTTGGGACT...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS-3UTR CAA 90 bp | GTGGGAACTGAAGATGTACCTTTGAGAGCAGACACCCAACATACATCAAGCCCGGCAATGTCCAAGAGGTaGGCCTTGAGCTTCTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: VGTEDVPLRADTQHTSSPAMSKR*ALSFWT Trigger: CGTCCAGAAGCTCAAGGCCAACCTCTTGGACATTGC...CGGGCTTGATGTATGTTGGGTGTCTGCTCTCAAAGGTACATCTTCAGTTCCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165409.8 |
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| CDS-3UTR CAA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACGGATTTCAGGAAACTTaGTGGCAACAGTGTGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSSGKGLPRLKAASDSAHGFQET*WQQCAV Trigger: AACTGCACACTGTTGCCACAAAGTTTCCTGAAATCC...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS-3UTR CAA 90 bp | CTCCTTTTGTCAGAATCTAAAACCAAAGTCTCCAAGCGCCTCTTACCCAGGCTGGCAATGTCCAAGAGGTaGGCCTTGAGCTTCTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LLLSESKTKVSKRLLPRLAMSKR*ALSFWT Trigger: CGTCCAGAAGCTCAAGGCCAACCTCTTGGACATTGC...CAGCCTGGGTAAGAGGCGCTTGGAGACTTTGGTTTTAGATTCTGACAAAAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| CDS-3UTR CAA 90 bp | TCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTAGCAGGGAGAAGTTGTaGTCAAAATACTGGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSGKGLPRLKAASDSAHLSREKL*SKYWKR Trigger: CCTCTTCCAGTATTTTGACAACAACTTCTCCCTGCT...AAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS-3UTR CAA 90 bp | GGCTCCTCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACACGACCACACTCCTTTaGTCAGAATCTAAAACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GSSGKGLPRLKAASDSAHTTTLL*SESKTK Trigger: TTTGGTTTTAGATTCTGACAAAAGGAGTGTGGTCGT...GTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGAGGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
||
| CDS-3UTR CAA 90 bp | TCAGGTAAAGGTCTCCCCCGTCTGAAAGCAGCTTCTGACTCTGCACACCTTCACGAAAGCAGGGAGAAGTaGTTGTCAAAATACTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SGKGLPRLKAASDSAHLHESREK*LSKYWK Trigger: CTTCCAGTATTTTGACAACAACTTCTCCCTGCTTTC...GTGAAGGTGTGCAGAGTCAGAAGCTGCTTTCAGACGGGGGAGACCTTTACCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS TCA 90 bp | CCAATTTCTATAGGGCTAATGTTCATAATTTCTTCAAACGATAGGTaGACCATGTATCTGCCCAAAATCCATAACTTTTCTGCACTGACC | + |
|
Preference number: 5 (lower is better) Translates to: PISIGLMFIISSNDR*TMYLPKIHNFSALT Trigger: GGTCAGTGCAGAAAAGTTATGGATTTTGGGCAGATACATGGTTCACCTATCGTTTGAAGAAATTATGAACATTAGCCCTATAGAAATTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS TCA 72 bp | GGACGCCAGCCTGGAAGCCCCGGAGGCGGCTGCACTTaGGCATCTGGTGGAGAAGGACTTGGGCCAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GRQPGSPGGGCT*ASGGEGLGPGW Trigger: CCACCCTGGCCCAAGTCCTTCTCCACCAGATGCTCAAGTGCAGCCGCCTCCGGGGCTTCCAGGCTGGCGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| CDS CCA 72 bp | GCCTGGAAGCCCCGGAGGCGGCTGCACTTGAGCATCTaGTGGAGAAGGACTTGGGCCAGGGTGGCATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AWKPRRRLHLSI*WRRTWARVASS Trigger: GCTGGATGCCACCCTGGCCCAAGTCCTTCTCCACCAGATGCTCAAGTGCAGCCGCCTCCGGGGCTTCCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS CAA 72 bp | TGGACGCCAGCCTGGAAGCCCCGGAGGCGGCTGCACTaGAGCATCTGGTGGAGAAGGACTTGGGCCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WTPAWKPRRRLH*SIWWRRTWARV Trigger: CACCCTGGCCCAAGTCCTTCTCCACCAGATGCTCAAGTGCAGCCGCCTCCGGGGCTTCCAGGCTGGCGTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS CCA 72 bp | TGGAAGCCCCGGAGGCGGCTGCACTTGAGCATCTGGTaGAGAAGGACTTGGGCCAGGGTGGCATCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WKPRRRLHLSIW*RRTWARVASSS Trigger: GCTGCTGGATGCCACCCTGGCCCAAGTCCTTCTCCACCAGATGCTCAAGTGCAGCCGCCTCCGGGGCTTCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS CAA 90 bp | TTGAGCTTCTGGACGCCAGCCTGGAAGCCCCGGAGGCGGCTGCACTaGAGCATCTGGTGGAGAAGGACTTGGGCCAGGGTGGCATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSFWTPAWKPRRRLH*SIWWRRTWARVASS Trigger: GCTGGATGCCACCCTGGCCCAAGTCCTTCTCCACCAGATGCTCAAGTGCAGCCGCCTCCGGGGCTTCCAGGCTGGCGTCCAGAAGCTCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS CCA 72 bp | TCCAAGAGGTTGGCCTTGAGCTTCTGGACGCCAGCCTaGAAGCCCCGGAGGCGGCTGCACTTGAGCATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SKRLALSFWTPA*KPRRRLHLSIW Trigger: CCAGATGCTCAAGTGCAGCCGCCTCCGGGGCTTCCAGGCTGGCGTCCAGAAGCTCAAGGCCAACCTCTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS CCA 72 bp | TCTGTAGCAATGTCCAAGAGGTTGGCCTTGAGCTTCTaGACGCCAGCCTGGAAGCCCCGGAGGCGGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SVAMSKRLALSF*TPAWKPRRRLH Trigger: GTGCAGCCGCCTCCGGGGCTTCCAGGCTGGCGTCCAGAAGCTCAAGGCCAACCTCTTGGACATTGCTACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 ENSMUST00000165409.8 |
||
| CDS GCA 72 bp | TGCAGGTCCTGGGGTAGCCTTTCTGTAATGTCTGGCTaGAGGAAGCTGCCGGAGGACCCTCTGAGCACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CRSWGSLSVMSG*RKLPEDPLSTL Trigger: CAGGGTGCTCAGAGGGTCCTCCGGCAGCTTCCTGCAGCCAGACATTACAGAAAGGCTACCCCAGGACCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
||
| CDS CCA 72 bp | AGGCGGCTGCACTTGAGCATCTGGTGGAGAAGGACTTaGGCCAGGGTGGCATCCAGCAGCTCCAAACCATCA | + |
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Preference number: 6 (lower is better) Translates to: RRLHLSIWWRRT*ARVASSSSKPS Trigger: TGATGGTTTGGAGCTGCTGGATGCCACCCTGGCCCAAGTCCTTCTCCACCAGATGCTCAAGTGCAGCCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| CDS CAA 90 bp | GAAGCCCCGGAGGCGGCTGCACTTGAGCATCTGGTGGAGAAGGACTaGGGCCAGGGTGGCATCCAGCAGCTCCAAACCATCATAGAAACA | + |
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Preference number: 6 (lower is better) Translates to: EAPEAAALEHLVEKD*GQGGIQQLQTIIET Trigger: TGTTTCTATGATGGTTTGGAGCTGCTGGATGCCACCCTGGCCCAAGTCCTTCTCCACCAGATGCTCAAGTGCAGCCGCCTCCGGGGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047025.15 ENSMUST00000163275.2 ENSMUST00000165409.8 |
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| CDS TCA 72 bp | GTGATGAGAAAGAGGCTGCGGTTCACACCAGGGCTCTaGAGGGCCTCGTCCCGAATGTCTCCCAAGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: VMRKRLRFTPGL*RASSRMSPKLM Trigger: CATCAACTTGGGAGACATTCGGGACGAGGCCCTTCAGAGCCCTGGTGTGAACCGCAGCCTCTTTCTCATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS TCA 72 bp | GGATCCTCTCCAGAAATGCCTGGGCCAGTTCAGGGGTaGTGTCATACACCATGTCCAACTGCTTGGTGGCGT | + |
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Preference number: 6 (lower is better) Translates to: GSSPEMPGPVQG*CHTPCPTAWWR Trigger: ACGCCACCAAGCAGTTGGACATGGTGTATGACATCACCCCTGAACTGGCCCAGGCATTTCTGGAGAGGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS CCA 72 bp | CCCAGGACCTCCACACACTCCAAGGCATTCAGCACCTaGAAACAGCGTTCCAACGTGATGAGAAAGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PRTSTHSKAFST*KQRSNVMRKRL Trigger: CAGCCTCTTTCTCATCACGTTGGAACGCTGTTTCCAGGTGCTGAATGCCTTGGAGTGTGTGGAGGTCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS CCA 72 bp | GCGGACAGGTTCTTAAAGGCATCCTCGTGCAGGTCCTaGGGTAGCCTTTCTGTAATGTCTGGCTGCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ADRFLKASSCRS*GSLSVMSGCRK Trigger: CTTCCTGCAGCCAGACATTACAGAAAGGCTACCCCAGGACCTGCACGAGGATGCCTTTAAGAACCTGTCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS CCA 72 bp | GCACTGCATCGGAGGAGAGGGATTCCAGCTGACTGCTaGTCAGACCTACAACTGCATCTGACAGAGAGCCTA | + |
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Preference number: 6 (lower is better) Translates to: ALHRRRGIPADC*SDLQLHLTESL Trigger: TAGGCTCTCTGTCAGATGCAGTTGTAGGTCTGACCAGCAGTCAGCTGGAATCCCTCTCCTCCGATGCAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS GCA 72 bp | CAGCTTCTGTGGCTGGTACAGATACTGTTCCAGGTGTaGTTCCATGACTGCCTGCAGGCTGGGAATGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: QLLWLVQILFQV*FHDCLQAGNGE Trigger: TTCACCATTCCCAGCCTGCAGGCAGTCATGGAAGCACACCTGGAACAGTATCTGTACCAGCCACAGAAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS GCA 72 bp | TTGTCTTCCAGAAGGCATTTCATGGCGGTGTGGAACTaGTGGTTATCAGTAGCCCTCAGGTCCTCCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LSSRRHFMAVWN*WLSVALRSSSS Trigger: GCTGCTGGAGGACCTGAGGGCTACTGATAACCAGCAGTTCCACACCGCCATGAAATGCCTTCTGGAAGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS CCA 72 bp | CCGCCATTTTCTGCAACAATGGATGTAAATCCTGCCTaGGGCTTGGCTCTCTCTGATAGGCACCTCCATGGC | + |
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Preference number: 6 (lower is better) Translates to: PPFSATMDVNPA*GLALSDRHLHG Trigger: GCCATGGAGGTGCCTATCAGAGAGAGCCAAGCCCCAGGCAGGATTTACATCCATTGTTGCAGAAAATGGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS CCA 72 bp | TCTTCCAGAAGGCATTTCATGGCGGTGTGGAACTGCTaGTTATCAGTAGCCCTCAGGTCCTCCAGCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSRRHFMAVWNC*LSVALRSSSSF Trigger: GAAGCTGCTGGAGGACCTGAGGGCTACTGATAACCAGCAGTTCCACACCGCCATGAAATGCCTTCTGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS CCA 72 bp | TCTCCCAAGTTGATGACGACGTCCTCCAGATCCAGGTaGCCCCATTTGTCTTCCAGAAGGCATTTCATGGCG | + |
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Preference number: 6 (lower is better) Translates to: SPKLMTTSSRSR*PHLSSRRHFMA Trigger: CGCCATGAAATGCCTTCTGGAAGACAAATGGGGCCACCTGGATCTGGAGGACGTCGTCATCAACTTGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS CAA 72 bp | TTGATGACGACGTCCTCCAGATCCAGGTGGCCCCATTaGTCTTCCAGAAGGCATTTCATGGCGGTGTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LMTTSSRSRWPH*SSRRHFMAVWN Trigger: GTTCCACACCGCCATGAAATGCCTTCTGGAAGACAAATGGGGCCACCTGGATCTGGAGGACGTCGTCATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS CAA 90 bp | CTTCCGCCATTTTCTGCAACAATGGATGTAAATCCTGCCTGGGGCTaGGCTCTCTCTGATAGGCACCTCCATGGCTCAGAAGGAGGACCA | + |
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Preference number: 6 (lower is better) Translates to: LPPFSATMDVNPAWG*ALSDRHLHGSEGGP Trigger: TGGTCCTCCTTCTGAGCCATGGAGGTGCCTATCAGAGAGAGCCAAGCCCCAGGCAGGATTTACATCCATTGTTGCAGAAAATGGCGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS CAA 90 bp | TCTCCCAAGTTGATGACGACGTCCTCCAGATCCAGGTGGCCCCATTaGTCTTCCAGAAGGCATTTCATGGCGGTGTGGAACTGCTGGTTA | + |
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Preference number: 6 (lower is better) Translates to: SPKLMTTSSRSRWPH*SSRRHFMAVWNCWL Trigger: TAACCAGCAGTTCCACACCGCCATGAAATGCCTTCTGGAAGACAAATGGGGCCACCTGGATCTGGAGGACGTCGTCATCAACTTGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS CAA 90 bp | CTGGTCAGACCTACAACTGCATCTGACAGAGAGCCTAGGGTCTCGTaGAGGGTCTGGTTCTCTGTAGCAATGTCCAAGAGGTTGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LVRPTTASDREPRVS*RVWFSVAMSKRLAL Trigger: CAAGGCCAACCTCTTGGACATTGCTACAGAGAACCAGACCCTCAACGAGACCCTAGGCTCTCTGTCAGATGCAGTTGTAGGTCTGACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS GCA 72 bp | CTGGTACAGATACTGTTCCAGGTGTGCTTCCATGACTaGCTGCAGGCTGGGAATGGTGAAGGCCACATTCTT | + |
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Preference number: 6 (lower is better) Translates to: LVQILFQVCFHD*LQAGNGEGHIL Trigger: AAGAATGTGGCCTTCACCATTCCCAGCCTGCAGGCAGTCATGGAAGCACACCTGGAACAGTATCTGTACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS GCA 72 bp | TTGAACACTGCGGACAGGTTCTTAAAGGCATCCTCGTaGAGGTCCTGGGGTAGCCTTTCTGTAATGTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LNTADRFLKASS*RSWGSLSVMSG Trigger: GCCAGACATTACAGAAAGGCTACCCCAGGACCTGCACGAGGATGCCTTTAAGAACCTGTCCGCAGTGTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS CAA 72 bp | TCTGCACTGACCCATGAAACTGAGCCATCAGTGACGTaGAAGGGTGTCCTCAGGATCCCTGTCATCCATGAG | + |
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Preference number: 6 (lower is better) Translates to: SALTHETEPSVT*KGVLRIPVIHE Trigger: CTCATGGATGACAGGGATCCTGAGGACACCCTTCAACGTCACTGATGGCTCAGTTTCATGGGTCAGTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS CAA 72 bp | CCTACAACTGCATCTGACAGAGAGCCTAGGGTCTCGTaGAGGGTCTGGTTCTCTGTAGCAATGTCCAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: PTTASDREPRVS*RVWFSVAMSKR Trigger: CCTCTTGGACATTGCTACAGAGAACCAGACCCTCAACGAGACCCTAGGCTCTCTGTCAGATGCAGTTGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047025.15 |
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| CDS GCA 72 bp | TACAGATACTGTTCCAGGTGTGCTTCCATGACTGCCTaGAGGCTGGGAATGGTGAAGGCCACATTCTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: YRYCSRCASMTA*RLGMVKATFFE Trigger: CTCAAAGAATGTGGCCTTCACCATTCCCAGCCTGCAGGCAGTCATGGAAGCACACCTGGAACAGTATCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS CCA 72 bp | GCAAGGACTCTGTGGGACAGGTCTGCAGTCCAGACATaGGACCTTTCAAATAGTGTGAGATCCAGTAACGCA | + |
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Preference number: 6 (lower is better) Translates to: ARTLWDRSAVQT*DLSNSVRSSNA Trigger: TGCGTTACTGGATCTCACACTATTTGAAAGGTCCCATGTCTGGACTGCAGACCTGTCCCACAGAGTCCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS CAA 72 bp | TTTTCTGCAACAATGGATGTAAATCCTGCCTGGGGCTaGGCTCTCTCTGATAGGCACCTCCATGGCTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: FSATMDVNPAWG*ALSDRHLHGSE Trigger: TTCTGAGCCATGGAGGTGCCTATCAGAGAGAGCCAAGCCCCAGGCAGGATTTACATCCATTGTTGCAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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| CDS TCA 72 bp | GGTCTGCAGTCCAGACATGGGACCTTTCAAATAGTGTaGGATCCAGTAACGCATTCAGATAGCTTCCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: GLQSRHGTFQIV*DPVTHSDSFPL Trigger: TAGAGGGAAGCTATCTGAATGCGTTACTGGATCTCACACTATTTGAAAGGTCCCATGTCTGGACTGCAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047025.15 ENSMUST00000170106.2 |
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