Pregenerated sensors for OTC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031173Ensembl transcript IDs: ENSMUST00000049910.13, ENSMUST00000115528.3
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGAGAATCTGGCAAAGTTTAGGAGCTCAGATCACATGGCTGAAATaGAATGAACTCCAAGGGACCTCCAAATCCTTCAGCACAGGCACA | + |
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Preference number: 1 (lower is better) Translates to: QRIWQSLGAQITWLK*NELQGTSKSFSTGT Trigger: TGTGCCTGTGCTGAAGGATTTGGAGGTCCCTTGGAGTTCATTTCATTTCAGCCATGTGATCTGAGCTCCTAAACTTTGCCAGATTCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR TCA 90 bp | GCCGTTGACTGCCACCTTCTCAGCATTCATGTCAAGAATGGTAATTaGTCAGTTTTGCCTCTCTTTCTGTTCTACACCACAGACACAAGA | + |
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Preference number: 1 (lower is better) Translates to: AVDCHLLSIHVKNGN*SVLPLFLFYTTDTR Trigger: TCTTGTGTCTGTGGTGTAGAACAGAAAGAGAGGCAAAACTGATCAATTACCATTCTTGACATGAATGCTGAGAAGGTGGCAGTCAACGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR TCA 90 bp | TCTGTGACTCAGTGGGCTCATTTTATGGGTGAGCCCACTGAAGGTTaGGACAATTTATCTAAGATGACACAGATGGTTTGTTTTAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: SVTQWAHFMGEPTEG*DNLSKMTQMVCFKA Trigger: AGCTTTAAAACAAACCATCTGTGTCATCTTAGATAAATTGTCTCAACCTTCAGTGGGCTCACCCATAAAATGAGCCCACTGAGTCACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR TCA 90 bp | ATTTTATGGGTGAGCCCACTGAAGGTTGAGACAATTTATCTAAGATaGCACAGATGGTTTGTTTTAAAGCTGGTTGGTAGAAGGGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: ILWVSPLKVETIYLR*HRWFVLKLVGRRAF Trigger: GAAAGCCCTTCTACCAACCAGCTTTAAAACAAACCATCTGTGTCATCTTAGATAAATTGTCTCAACCTTCAGTGGGCTCACCCATAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR TCA 90 bp | GAATTACATAATCTCTCTTTGACTGTCTGTCTTCCCTCATTGGCCTaGAAATTGTACTCATTTGCAGGATGTAAGTCATTTGATTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: ELHNLSLTVCLPSLA*KLYSFAGCKSFDFS Trigger: GGAGAAATCAAATGACTTACATCCTGCAAATGAGTACAATTTTCAGGCCAATGAGGGAAGACAGACAGTCAAAGAGAGATTATGTAATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCACAAGGACACAGCTGTCAGCCGTTGACTGCCACCTTCTCAGCATTCATATCTCTGTGACTCAGTaGGCTCATTTTATGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: TGTRTQLSAVDCHLLSIHISVTQ*AHFMGE Trigger: CTCACCCATAAAATGAGCCCACTGAGTCACAGAGAT...ATGAATGCTGAGAAGGTGGCAGTCAACGGCTGACAGCTGTGTCCTTGTGCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR-3UTR CCA 90 bp | TTGCCTCTCTTTCTGTTCTACACCACAGACACAAGATTCCCCTCCACACAGGACAGTGGGCTCATTTTATaGGTGAGCCCACTGAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LPLFLFYTTDTRFPSTQDSGLIL*VSPLKV Trigger: AACCTTCAGTGGGCTCACCCATAAAATGAGCCCACT...GTCCTGTGTGGAGGGGAATCTTGTGTCTGTGGTGTAGAACAGAAAGAGAGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR-3UTR TCA 90 bp | TTGCCTCTCTTTCTGTTCTACACCACAGACACAAGATTCCCCTCCACACAGGACGAGCCCACTGAAGGTTaGGACAATTTATCTAAGATG | + |
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Preference number: 2 (lower is better) Translates to: LPLFLFYTTDTRFPSTQDEPTEG*DNLSKM Trigger: CATCTTAGATAAATTGTCTCAACCTTCAGTGGGCTC...GTCCTGTGTGGAGGGGAATCTTGTGTCTGTGGTGTAGAACAGAAAGAGAGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR-3UTR TCA 90 bp | GCACACGTTTGCTTTCGTGATCTTACACAGGTTAGGGACAGGCTCTCTCTGTATATGGCTGAAATGAAATaGACTCCAAGGGACCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: AHVCFRDLTQVRDRLSLYMAEMK*TPRDLQ Trigger: TTGGAGGTCCCTTGGAGTTCATTTCATTTCAGCCAT...ATACAGAGAGAGCCTGTCCCTAACCTGTGTAAGATCACGAAAGCAAACGTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR-3UTR TCA 90 bp | ATCTTACACAGGTTAGGGACAGGCTCTCTCTGTATTCTTGGAGTGATGGACCTTATCACATGGCTGAAATaGAATGAACTCCAAGGGACC | + |
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Preference number: 2 (lower is better) Translates to: ILHRLGTGSLCILGVMDLITWLK*NELQGT Trigger: GGTCCCTTGGAGTTCATTTCATTTCAGCCATGTGAT...AAGGTCCATCACTCCAAGAATACAGAGAGAGCCTGTCCCTAACCTGTGTAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR-3UTR CCA 90 bp | GCACACGTTTGCTTTCGTGATCTTACACAGGTTAGGGACAGGCTCTCTCTGTATGTACCCAGTGGCTCCTaGATTGATAGAACAATTGTA | + |
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Preference number: 2 (lower is better) Translates to: AHVCFRDLTQVRDRLSLYVPSGS*IDRTIV Trigger: TACAATTGTTCTATCAATCCAGGAGCCACTGGGTAC...ATACAGAGAGAGCCTGTCCCTAACCTGTGTAAGATCACGAAAGCAAACGTGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR-3UTR GCA 90 bp | GCACACGTTTGCTTTCGTGATCTTACACAGGTTAGGGACAGGCTCTCTCTGTATCATCCTGCTCGAAAATaGTCTGCACTTAGAAATTGT | + |
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Preference number: 2 (lower is better) Translates to: AHVCFRDLTQVRDRLSLYHPARK*SALRNC Trigger: ACAATTTCTAAGTGCAGAGCATTTTCGAGCAGGATG...ATACAGAGAGAGCCTGTCCCTAACCTGTGTAAGATCACGAAAGCAAACGTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR-3UTR GCA 90 bp | TGCATCTCAGGTTTTCCTTTATTGCTCAGAGTCATACAACATGTTAAGCTTAGTAGGCTGTGTGAGGGCTaGGTATTATTCTTTTGTATT | + |
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Preference number: 2 (lower is better) Translates to: CISGFPLLLRVIQHVKLSRLCEG*VLFFCI Trigger: AATACAAAAGAATAATACGCAGCCCTCACACAGCCT...ACTAAGCTTAACATGTTGTATGACTCTGAGCAATAAAGGAAAACCTGAGATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR CAA 90 bp | GGCAGTGTTAGCTTGGAGAATAATTTTGAGTACTGTGAATTATATTaGCAAAGGTGTTACATACTTAAGGACCACCTAGATAACTGCATT | + |
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Preference number: 2 (lower is better) Translates to: GSVSLENNFEYCELY*QRCYILKDHLDNCI Trigger: AATGCAGTTATCTAGGTGGTCCTTAAGTATGTAACACCTTTGCAAATATAATTCACAGTACTCAAAATTATTCTCCAAGCTAACACTGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR-3UTR GCA 90 bp | TGCATCTCAGGTTTTCCTTTATTGCTCAGAGTCATACAACATGTTAAGCTTAGTGTTTTTAAAGATGTGTaGACTATGGAGCGAATATTG | + |
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Preference number: 2 (lower is better) Translates to: CISGFPLLLRVIQHVKLSVFKDV*TMERIL Trigger: CAATATTCGCTCCATAGTGCACACATCTTTAAAAAC...ACTAAGCTTAACATGTTGTATGACTCTGAGCAATAAAGGAAAACCTGAGATGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR-3UTR CCA 90 bp | CATGTAACAGGTAAAACTGTTCAATCTGTTTTAGTGGTTTACAGATCTGCATCTCAAAAACAAATTTTCTaGGGAGGAATGTGTGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: HVTGKTVQSVLVVYRSASQKQIF*GGMCVL Trigger: AAGCACACACATTCCTCCCCAGAAAATTTGTTTTTG...AGATGCAGATCTGTAAACCACTAAAACAGATTGAACAGTTTTACCTGTTACATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR-3UTR CCA 90 bp | TGCATCTCAGGTTTTCCTTTATTGCTCAGAGTCATACAACATGTTAAGCTTAGTATGGCAGTGTTAGCTTaGAGAATAATTTTGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: CISGFPLLLRVIQHVKLSMAVLA*RIILST Trigger: AGTACTCAAAATTATTCTCCAAGCTAACACTGCCAT...ACTAAGCTTAACATGTTGTATGACTCTGAGCAATAAAGGAAAACCTGAGATGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR-3UTR CCA 90 bp | CATGTAACAGGTAAAACTGTTCAATCTGTTTTAGTGGTTTACAGATCTGCATCTAGCTACAGACAATATTaGACACTTAATGTGAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: HVTGKTVQSVLVVYRSASSYRQY*TLNVRF Trigger: AAACCTCACATTAAGTGTCCAATATTGTCTGTAGCT...AGATGCAGATCTGTAAACCACTAAAACAGATTGAACAGTTTTACCTGTTACATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR TCA 72 bp | CTTCAGCACAGGCACAAGGACACAGCTGTCAGCCGTTaGCTGCCACCTTCTCAGCATTCATGTCAAGAATGG | + |
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Preference number: 3 (lower is better) Translates to: LQHRHKDTAVSR*LPPSQHSCQEW Trigger: CCATTCTTGACATGAATGCTGAGAAGGTGGCAGTCAACGGCTGACAGCTGTGTCCTTGTGCCTGTGCTGAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR GCA 72 bp | AGCACAGGCACAAGGACACAGCTGTCAGCCGTTGACTaGCACCTTCTCAGCATTCATGTCAAGAATGGTAAT | + |
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Preference number: 3 (lower is better) Translates to: STGTRTQLSAVD*HLLSIHVKNGN Trigger: ATTACCATTCTTGACATGAATGCTGAGAAGGTGGCAGTCAACGGCTGACAGCTGTGTCCTTGTGCCTGTGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR GCA 72 bp | TGGAGGCCTTATAAAGGAACTCTAACAGCACACGTTTaGTTTCGTGATCTTACACAGGTTAGGGACAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: WRPYKGTLTAHV*FRDLTQVRDRL Trigger: GAGCCTGTCCCTAACCTGTGTAAGATCACGAAAGCAAACGTGTGCTGTTAGAGTTCCTTTATAAGGCCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR TCA 72 bp | AAGTTTAGGAGCTCAGATCACATGGCTGAAATGAAATaGACTCCAAGGGACCTCCAAATCCTTCAGCACAGG | + |
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Preference number: 3 (lower is better) Translates to: KFRSSDHMAEMK*TPRDLQILQHR Trigger: CCTGTGCTGAAGGATTTGGAGGTCCCTTGGAGTTCATTTCATTTCAGCCATGTGATCTGAGCTCCTAAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR TCA 72 bp | TGGCAAAGTTTAGGAGCTCAGATCACATGGCTGAAATaGAATGAACTCCAAGGGACCTCCAAATCCTTCAGC | + |
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Preference number: 3 (lower is better) Translates to: WQSLGAQITWLK*NELQGTSKSFS Trigger: GCTGAAGGATTTGGAGGTCCCTTGGAGTTCATTTCATTTCAGCCATGTGATCTGAGCTCCTAAACTTTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR-3UTR CAA 90 bp | ATCTTACACAGGTTAGGGACAGGCTCTCTCTGTATTCTTGGAGTGATGGACCTTCTAAAACTGTCAGCATaGGTGAAAATGACCTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: ILHRLGTGSLCILGVMDLLKLSA*VKMTCL Trigger: CAAGCAGGTCATTTTCACCAATGCTGACAGTTTTAG...AAGGTCCATCACTCCAAGAATACAGAGAGAGCCTGTCCCTAACCTGTGTAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR CCA 72 bp | TTTCATTTTAAATCCCGCAATGCCGGGCAGAGAATCTaGCAAAGTTTAGGAGCTCAGATCACATGGCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: FHFKSRNAGQRI*QSLGAQITWLK Trigger: TTTCAGCCATGTGATCTGAGCTCCTAAACTTTGCCAGATTCTCTGCCCGGCATTGCGGGATTTAAAATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR TCA 72 bp | CAGTGGGCTCATTTTATGGGTGAGCCCACTGAAGGTTaGGACAATTTATCTAAGATGACACAGATGGTTTGT | + |
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Preference number: 3 (lower is better) Translates to: QWAHFMGEPTEG*DNLSKMTQMVC Trigger: ACAAACCATCTGTGTCATCTTAGATAAATTGTCTCAACCTTCAGTGGGCTCACCCATAAAATGAGCCCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR CCA 72 bp | CTTACACAGGTTAGGGACAGGCTCTCTCTGTATTCTTaGAGTGATGGACCTTACAATAGTCATTGTATGTAT | + |
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Preference number: 3 (lower is better) Translates to: LTQVRDRLSLYS*SDGPYNSHCMY Trigger: ATACATACAATGACTATTGTAAGGTCCATCACTCCAAGAATACAGAGAGAGCCTGTCCCTAACCTGTGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR TCA 72 bp | TCCATTGGTCTTAAGGCCCATGAACTTACCAGCAGTTaGCTGCCTGGCAAATGTTTATTTATAAATGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: SIGLKAHELTSS*LPGKCLFINEH Trigger: ATGCTCATTTATAAATAAACATTTGCCAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
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| 3UTR TCA 72 bp | GTGAGCCCACTGAAGGTTGAGACAATTTATCTAAGATaGCACAGATGGTTTGTTTTAAAGCTGGTTGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: VSPLKVETIYLR*HRWFVLKLVGR Trigger: TCTACCAACCAGCTTTAAAACAAACCATCTGTGTCATCTTAGATAAATTGTCTCAACCTTCAGTGGGCTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR CCA 72 bp | CTGTCTAATACAGTAGCCACTAGCTACAGACAATATTaGACACTTAATGTGAGGTTTGAGGTTAGTTTGACC | + |
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Preference number: 3 (lower is better) Translates to: LSNTVATSYRQY*TLNVRFEVSLT Trigger: GGTCAAACTAACCTCAAACCTCACATTAAGTGTCCAATATTGTCTGTAGCTAGTGGCTACTGTATTAGACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR GCA 72 bp | GTGGTTTACAGATCTGCATCTCAGGTTTTCCTTTATTaGTCAGAGTCATACAACATGTTAAGCTTAGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: VVYRSASQVFLY*SESYNMLSLVS Trigger: TGAAACTAAGCTTAACATGTTGTATGACTCTGAGCAATAAAGGAAAACCTGAGATGCAGATCTGTAAACCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| 3UTR-3UTR CAA 90 bp | GCTTACTCATTTAAGTCATCAATGTCTGTTAAAGAATATCAGTCAACCAGACTGCATAGATGTATACACTaGACAGACTCCAATATTTCC | + |
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Preference number: 3 (lower is better) Translates to: AYSFKSSMSVKEYQSTRLHRCIH*TDSNIS Trigger: GGAAATATTGGAGTCTGTCAAGTGTATACATCTATG...CAGTCTGGTTGACTGATATTCTTTAACAGACATTGATGACTTAAATGAGTAAGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
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| 3UTR CAA 72 bp | CCTTCAGCACAGGCACAAGGACACAGCTGTCAGCCGTaGACTGCCACCTTCTCAGCATTCATGTCAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: PSAQAQGHSCQP*TATFSAFMSRM Trigger: CATTCTTGACATGAATGCTGAGAAGGTGGCAGTCAACGGCTGACAGCTGTGTCCTTGTGCCTGTGCTGAAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| CDS-3UTR GCA 90 bp | ACAGGCACAAGGACACAGCTGTCAGCCGTTGACTGCCACCTTCTCAGCATTCATTACATTGCCTCCACGTaGTGCTTCCAGTGGATCATT | + |
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Preference number: 4 (lower is better) Translates to: TGTRTQLSAVDCHLLSIHYIAST*CFQWII Trigger: AATGATCCACTGGAAGCAGCACGTGGAGGCAATGTA...ATGAATGCTGAGAAGGTGGCAGTCAACGGCTGACAGCTGTGTCCTTGTGCCTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| CDS-3UTR TCA 90 bp | TTGATTTCTCCATTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGCTTCTGGAGCACAGGTaGGTAGTCTGTCAGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LISPLVLRPMNLPAVDCLLLEHR*VVCQQG Trigger: TCCCTGCTGACAGACTACTCACCTGTGCTCCAGAAG...CAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAATGGAGAAATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
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| CDS-3UTR TCA 90 bp | CAGCTGTCAGCCGTTGACTGCCACCTTCTCAGCATTCATGTCAAGAATGGTAATCGAACCACAGAAGTGTaGCCCTTTCTAAGAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QLSAVDCHLLSIHVKNGNRTTEV*PFLRAA Trigger: TGCAGCTCTTAGAAAGGGTCACACTTCTGTGGTTCG...ATTACCATTCTTGACATGAATGCTGAGAAGGTGGCAGTCAACGGCTGACAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| CDS-3UTR TCA 90 bp | TTGATTTCTCCATTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGCACGAGCGGTGTCTGTaGGACTTTCATTCACACCCA | + |
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Preference number: 4 (lower is better) Translates to: LISPLVLRPMNLPAVDCLHERCL*DFHSHP Trigger: TGGGTGTGAATGAAAGTCTCACAGACACCGCTCGTG...CAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAATGGAGAAATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
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| CDS-3UTR GCA 90 bp | AAAGGAGCCAGGGAGGACATTTCAGTGGTGTGGGGGAACCATGTAACAGGTAAAGACAATTGGGATGGATaGTTCTTTAGCCAGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: KGAREDISVVWGNHVTGKDNWDG*FFSQGV Trigger: GACACCCTGGCTAAAGAAGCATCCATCCCAATTGTC...TTTACCTGTTACATGGTTCCCCCACACCACTGAAATGTCCTCCCTGGCTCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| CDS-3UTR GCA 90 bp | TTGCCTCTCTTTCTGTTCTACACCACAGACACAAGATTCCCCTCCACACAGGACATTGCCTCCACGTGCTaGTTCCAGTGGATCATTTGT | + |
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Preference number: 4 (lower is better) Translates to: LPLFLFYTTDTRFPSTQDIASTC*FQWIIC Trigger: ACAAATGATCCACTGGAAGCAGCACGTGGAGGCAAT...GTCCTGTGTGGAGGGGAATCTTGTGTCTGTGGTGTAGAACAGAAAGAGAGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| CDS-3UTR CCA 90 bp | ACAGGCACAAGGACACAGCTGTCAGCCGTTGACTGCCACCTTCTCAGCATTCATATCATCCACTTCTTCTaGCTTTCTAGGCAAACAGTG | + |
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Preference number: 4 (lower is better) Translates to: TGTRTQLSAVDCHLLSIHIIHFF*LSRQTV Trigger: CACTGTTTGCCTAGAAAGCCAGAAGAAGTGGATGAT...ATGAATGCTGAGAAGGTGGCAGTCAACGGCTGACAGCTGTGTCCTTGTGCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| CDS-3UTR TCA 90 bp | TTGCCTCTCTTTCTGTTCTACACCACAGACACAAGATTCCCCTCCACACAGGACAGTCTGACAGTCCATTaGCAATTGGGATGGATGCTT | + |
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Preference number: 4 (lower is better) Translates to: LPLFLFYTTDTRFPSTQDSLTVH*QLGWML Trigger: AAGCATCCATCCCAATTGTCAATGGACTGTCAGACT...GTCCTGTGTGGAGGGGAATCTTGTGTCTGTGGTGTAGAACAGAAAGAGAGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| CDS-3UTR TCA 90 bp | AAAGGAGCCAGGGAGGACATTTCAGTGGTGTGGGGGAACCATGTAACAGGTAAAAGGATCTGGATAGGATaGTACAAGTCTGACAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: KGAREDISVVWGNHVTGKRIWIG*YKSDSP Trigger: TGGACTGTCAGACTTGTATCATCCTATCCAGATCCT...TTTACCTGTTACATGGTTCCCCCACACCACTGAAATGTCCTCCCTGGCTCCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| CDS-3UTR CCA 90 bp | ACAGGCACAAGGACACAGCTGTCAGCCGTTGACTGCCACCTTCTCAGCATTCATTTGTCATTGACAACTTaGTACCATTCTCCTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: TGTRTQLSAVDCHLLSIHLSLTT*YHSPWH Trigger: ATGCCAAGGAGAATGGTACCAAGTTGTCAATGACAA...ATGAATGCTGAGAAGGTGGCAGTCAACGGCTGACAGCTGTGTCCTTGTGCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| CDS-3UTR TCA 90 bp | TTGATTTCTCCATTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGCAGGGTGTCCAGATCTaGTTGTTTATACACTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: LISPLVLRPMNLPAVDCLQGVQI*LFIHSS Trigger: GCTCGAGTGTATAAACAATCAGATCTGGACACCCTG...CAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAATGGAGAAATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
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| CDS-3UTR TCA 90 bp | GCACACGTTTGCTTTCGTGATCTTACACAGGTTAGGGACAGGCTCTCTCTGTATTTTGGAGTAGCTGCTTaGAGGTGCATCCCGAATTTT | + |
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Preference number: 4 (lower is better) Translates to: AHVCFRDLTQVRDRLSLYFGVAA*RCIPNF Trigger: AAAATTCGGGATGCACCTTCAAGCAGCTACTCCAAA...ATACAGAGAGAGCCTGTCCCTAACCTGTGTAAGATCACGAAAGCAAACGTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| CDS-3UTR GCA 90 bp | TTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGGCAAATGTTTATACCCTTTGGAGTAGCTaGTTGAAGGTGCATCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: LVLRPMNLPAVDCLANVYTLWSS*LKVHPE Trigger: TTCGGGATGCACCTTCAAGCAGCTACTCCAAAGGGT...ATAAACATTTGCCAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
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| CDS-3UTR GCA 90 bp | TTGATTTCTCCATTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGATTGCCTCCACGTGCTaGTTCCAGTGGATCATTTGT | + |
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Preference number: 4 (lower is better) Translates to: LISPLVLRPMNLPAVDCLIASTC*FQWIIC Trigger: ACAAATGATCCACTGGAAGCAGCACGTGGAGGCAAT...CAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAATGGAGAAATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
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| CDS-3UTR CCA 90 bp | AAAGGAGCCAGGGAGGACATTTCAGTGGTGTGGGGGAACCATGTAACAGGTAAACAGTCCATTGACAATTaGGATGGATGCTTCTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGAREDISVVWGNHVTGKQSIDN*DGCFFS Trigger: GCTAAAGAAGCATCCATCCCAATTGTCAATGGACTG...TTTACCTGTTACATGGTTCCCCCACACCACTGAAATGTCCTCCCTGGCTCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS-3UTR TCA 90 bp | GCACACGTTTGCTTTCGTGATCTTACACAGGTTAGGGACAGGCTCTCTCTGTATTCATTCACACCCAAGTaGATGTCTTGTGTGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AHVCFRDLTQVRDRLSLYSFTPK*MSCVVR Trigger: TCTTACCACACAAGACATTCACTTGGGTGTGAATGA...ATACAGAGAGAGCCTGTCCCTAACCTGTGTAAGATCACGAAAGCAAACGTGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS-3UTR GCA 90 bp | TTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGGCAAATGTTTATTACATTGCCTCCACGTaGTGCTTCCAGTGGATCATT | + |
|
Preference number: 4 (lower is better) Translates to: LVLRPMNLPAVDCLANVYYIAST*CFQWII Trigger: AATGATCCACTGGAAGCAGCACGTGGAGGCAATGTA...ATAAACATTTGCCAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR CCA 90 bp | ATCTTACACAGGTTAGGGACAGGCTCTCTCTGTATTCTTGGAGTGATGGACCTTCAAAGCCTGTTTCTGTaGACAGTCTTGTTCGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ILHRLGTGSLCILGVMDLQSLFL*TVLFEY Trigger: GTACTCGAACAAGACTGTCCACAGAAACAGGCTTTG...AAGGTCCATCACTCCAAGAATACAGAGAGAGCCTGTCCCTAACCTGTGTAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS-3UTR TCA 90 bp | TTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGGCAAATGTTTATAGTCTGACAGTCCATTaGCAATTGGGATGGATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVLRPMNLPAVDCLANVYSLTVH*QLGWML Trigger: AAGCATCCATCCCAATTGTCAATGGACTGTCAGACT...ATAAACATTTGCCAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR TCA 90 bp | TTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGGCAAATGTTTATTTTGGAGTAGCTGCTTaGAGGTGCATCCCGAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVLRPMNLPAVDCLANVYFGVAA*RCIPNF Trigger: AAAATTCGGGATGCACCTTCAAGCAGCTACTCCAAA...ATAAACATTTGCCAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR TCA 90 bp | CAGCTGTCAGCCGTTGACTGCCACCTTCTCAGCATTCATGTCAAGAATGGTAATTGGATCATTTGTCATTaGCAACTTGGTACCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QLSAVDCHLLSIHVKNGNWIICH*QLGTIL Trigger: GAGAATGGTACCAAGTTGTCAATGACAAATGATCCA...ATTACCATTCTTGACATGAATGCTGAGAAGGTGGCAGTCAACGGCTGACAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS-3UTR GCA 90 bp | GCACACGTTTGCTTTCGTGATCTTACACAGGTTAGGGACAGGCTCTCTCTGTATCTCATCATGATAGAGTaGAAGATATTGTTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AHVCFRDLTQVRDRLSLYLIMIE*KILFPS Trigger: GGATGGGAACAATATCTTGCACTCTATCATGATGAG...ATACAGAGAGAGCCTGTCCCTAACCTGTGTAAGATCACGAAAGCAAACGTGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS-3UTR TCA 90 bp | TTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGGCAAATGTTTATAGGATGATACAAGTCTaGCAGTCCATTGACAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLRPMNLPAVDCLANVYRMIQV*QSIDNW Trigger: CCAATTGTCAATGGACTGTCAGACTTGTATCATCCT...ATAAACATTTGCCAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| 3UTR CAA 72 bp | TCCCTAGAGGAGTGCTGTTCACTAAAACTGTCAGCATaGGTGAAAATGACCTGCTTGTACTGTCTAATACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLEECCSLKLSA*VKMTCLYCLIQ Trigger: CTGTATTAGACAGTACAAGCAGGTCATTTTCACCAATGCTGACAGTTTTAGTGAACAGCACTCCTCTAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS-3UTR TCA 90 bp | TTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGGCAAATGTTTATTGGATCATTTGTCATTaGCAACTTGGTACCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLRPMNLPAVDCLANVYWIICH*QLGTIL Trigger: GAGAATGGTACCAAGTTGTCAATGACAAATGATCCA...ATAAACATTTGCCAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR GCA 90 bp | TTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGGCAAATGTTTATCTCATCATGATAGAGTaGAAGATATTGTTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LVLRPMNLPAVDCLANVYLIMIE*KILFPS Trigger: GGATGGGAACAATATCTTGCACTCTATCATGATGAG...ATAAACATTTGCCAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR CCA 90 bp | TTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGGCAAATGTTTATTTGTCATTGACAACTTaGTACCATTCTCCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVLRPMNLPAVDCLANVYLSLTT*YHSPWH Trigger: ATGCCAAGGAGAATGGTACCAAGTTGTCAATGACAA...ATAAACATTTGCCAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| 3UTR CAA 72 bp | ACTCATTTGCAGGATGTAAGTCATTTGATTTCTCCATaGGTCTTAAGGCCCATGAACTTACCAGCAGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: THLQDVSHLISP*VLRPMNLPAVD Trigger: GTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAATGGAGAAATCAAATGACTTACATCCTGCAAATGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR TCA 90 bp | GCTTACTCATTTAAGTCATCAATGTCTGTTAAAGAATATCAGTCAACCAGACTGCGAACCACAGAAGTGTaGCCCTTTCTAAGAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AYSFKSSMSVKEYQSTRLRTTEV*PFLRAA Trigger: TGCAGCTCTTAGAAAGGGTCACACTTCTGTGGTTCG...CAGTCTGGTTGACTGATATTCTTTAACAGACATTGATGACTTAAATGAGTAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR TCA 90 bp | CATGTAACAGGTAAAACTGTTCAATCTGTTTTAGTGGTTTACAGATCTGCATCTCAGGGTGTCCAGATCTaGTTGTTTATACACTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVTGKTVQSVLVVYRSASQGVQI*LFIHSS Trigger: GCTCGAGTGTATAAACAATCAGATCTGGACACCCTG...AGATGCAGATCTGTAAACCACTAAAACAGATTGAACAGTTTTACCTGTTACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS-3UTR GCA 90 bp | GCTTACTCATTTAAGTCATCAATGTCTGTTAAAGAATATCAGTCAACCAGACTGGACAATTGGGATGGATaGTTCTTTAGCCAGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AYSFKSSMSVKEYQSTRLDNWDG*FFSQGV Trigger: GACACCCTGGCTAAAGAAGCATCCATCCCAATTGTC...CAGTCTGGTTGACTGATATTCTTTAACAGACATTGATGACTTAAATGAGTAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR CCA 90 bp | GATACCCAAATGTCATTCAGAGGTTGTAAATTGAAGAGAGTGTTTAAACCAAGTTGGTACCATTCTCCTTaGCATACTGCTCTGCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DTQMSFRGCKLKRVFKPSWYHSP*HTALLA Trigger: AGCTAGCAGAGCAGTATGCCAAGGAGAATGGTACCA...ACTTGGTTTAAACACTCTCTTCAATTTACAACCTCTGAATGACATTTGGGTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR TCA 90 bp | GATACCCAAATGTCATTCAGAGGTTGTAAATTGAAGAGAGTGTTTAAACCAAGTAGGATCTGGATAGGATaGTACAAGTCTGACAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DTQMSFRGCKLKRVFKPSRIWIG*YKSDSP Trigger: TGGACTGTCAGACTTGTATCATCCTATCCAGATCCT...ACTTGGTTTAAACACTCTCTTCAATTTACAACCTCTGAATGACATTTGGGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR CCA 90 bp | GATACCCAAATGTCATTCAGAGGTTGTAAATTGAAGAGAGTGTTTAAACCAAGTCAAAGCCTGTTTCTGTaGACAGTCTTGTTCGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: DTQMSFRGCKLKRVFKPSQSLFL*TVLFEY Trigger: GTACTCGAACAAGACTGTCCACAGAAACAGGCTTTG...ACTTGGTTTAAACACTCTCTTCAATTTACAACCTCTGAATGACATTTGGGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR TCA 90 bp | GCTTACTCATTTAAGTCATCAATGTCTGTTAAAGAATATCAGTCAACCAGACTGTCATTCACACCCAAGTaGATGTCTTGTGTGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AYSFKSSMSVKEYQSTRLSFTPK*MSCVVR Trigger: TCTTACCACACAAGACATTCACTTGGGTGTGAATGA...CAGTCTGGTTGACTGATATTCTTTAACAGACATTGATGACTTAAATGAGTAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR TCA 90 bp | CATGTAACAGGTAAAACTGTTCAATCTGTTTTAGTGGTTTACAGATCTGCATCTAGGATGATACAAGTCTaGCAGTCCATTGACAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: HVTGKTVQSVLVVYRSASRMIQV*QSIDNW Trigger: CCAATTGTCAATGGACTGTCAGACTTGTATCATCCT...AGATGCAGATCTGTAAACCACTAAAACAGATTGAACAGTTTTACCTGTTACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS-3UTR CCA 90 bp | GCTTACTCATTTAAGTCATCAATGTCTGTTAAAGAATATCAGTCAACCAGACTGCAGTCCATTGACAATTaGGATGGATGCTTCTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AYSFKSSMSVKEYQSTRLQSIDN*DGCFFS Trigger: GCTAAAGAAGCATCCATCCCAATTGTCAATGGACTG...CAGTCTGGTTGACTGATATTCTTTAACAGACATTGATGACTTAAATGAGTAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR CCA 90 bp | GCTTACTCATTTAAGTCATCAATGTCTGTTAAAGAATATCAGTCAACCAGACTGATCATCCACTTCTTCTaGCTTTCTAGGCAAACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AYSFKSSMSVKEYQSTRLIIHFF*LSRQTV Trigger: CACTGTTTGCCTAGAAAGCCAGAAGAAGTGGATGAT...CAGTCTGGTTGACTGATATTCTTTAACAGACATTGATGACTTAAATGAGTAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| 3UTR CAA 72 bp | AGTGGTTTACAGATCTGCATCTCAGGTTTTCCTTTATaGCTCAGAGTCATACAACATGTTAAGCTTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGLQICISGFPL*LRVIQHVKLSF Trigger: GAAACTAAGCTTAACATGTTGTATGACTCTGAGCAATAAAGGAAAACCTGAGATGCAGATCTGTAAACCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS CCA 90 bp | CAAGGTGAGGAGGTCACGGCCTTTCAGCTGTACTTGACTTTGGACTaGCTTCCCACACCAAAAATGTCGAACCACAGAAGTGTGACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGEEVTAFQLYLTLD*LPTPKMSNHRSVTL Trigger: AAGGGTCACACTTCTGTGGTTCGACATTTTTGGTGTGGGAAGCCAGTCCAAAGTCAAGTACAGCTGAAAGGCCGTGACCTCCTCACCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
||
| CDS-3UTR CAA 90 bp | ACAGGCACAAGGACACAGCTGTCAGCCGTTGACTGCCACCTTCTCAGCATTCATCTTTGGAGTAGCTGCTaGAAGGTGCATCCCGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: TGTRTQLSAVDCHLLSIHLWSSC*KVHPEF Trigger: AAATTCGGGATGCACCTTCAAGCAGCTACTCCAAAG...ATGAATGCTGAGAAGGTGGCAGTCAACGGCTGACAGCTGTGTCCTTGTGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS-3UTR CAA 90 bp | ACAGGCACAAGGACACAGCTGTCAGCCGTTGACTGCCACCTTCTCAGCATTCATACCCAAGTGAATGTCTaGTGTGGTAAGAAAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TGTRTQLSAVDCHLLSIHTQVNV*CGKKGR Trigger: CCTTCCTTTCTTACCACACAAGACATTCACTTGGGT...ATGAATGCTGAGAAGGTGGCAGTCAACGGCTGACAGCTGTGTCCTTGTGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS-3UTR CAA 90 bp | ACAGGCACAAGGACACAGCTGTCAGCCGTTGACTGCCACCTTCTCAGCATTCATAAGTCTGACAGTCCATaGACAATTGGGATGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: TGTRTQLSAVDCHLLSIHKSDSP*TIGMDA Trigger: AGCATCCATCCCAATTGTCAATGGACTGTCAGACTT...ATGAATGCTGAGAAGGTGGCAGTCAACGGCTGACAGCTGTGTCCTTGTGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS TCA 90 bp | GTGAAGTTCTTCAAGGTGAGGAGGTCACGGCCTTTCAGCTGTACTTaGCTTTGGACTGGCTTCCCACACCAAAAATGTCGAACCACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VKFFKVRRSRPFSCT*LWTGFPHQKCRTTE Trigger: TTCTGTGGTTCGACATTTTTGGTGTGGGAAGCCAGTCCAAAGTCAAGTACAGCTGAAAGGCCGTGACCTCCTCACCTTGAAGAACTTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
||
| CDS TCA 90 bp | GATAAGACACGAGCGGTGTCTGTGAGACTTTCATTCACACCCAAGTaGATGTCTTGTGTGGTAAGAAAGGAAGGGTGTCCTCCCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: DKTRAVSVRLSFTPK*MSCVVRKEGCPPSR Trigger: TCTGCTGGGAGGACACCCTTCCTTTCTTACCACACAAGACATTCACTTGGGTGTGAATGAAAGTCTCACAGACACCGCTCGTGTCTTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGCCAGGGAGGACATTTCAGTGGTGTGGGGGAACCATGTAACAGGTAAACGTAACCTGGTAACCTaGGAAAGCTTGAAGACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KGAREDISVVWGNHVTGKRNLVT*ESLKTL Trigger: AAGCGTCTTCAAGCTTTCCAAGGTTACCAGGTTACG...TTTACCTGTTACATGGTTCCCCCACACCACTGAAATGTCCTCCCTGGCTCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS TCA 90 bp | TGCTTGATCCTGAATTTCAGATCTGCAGAGAGCCATAGCATGTACTaGATCTCCTCTCCTGTGAAGTTCTTCAAGGTGAGGAGGTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: CLILNFRSAESHSMY*ISSPVKFFKVRRSR Trigger: CCGTGACCTCCTCACCTTGAAGAACTTCACAGGAGAGGAGATTCAGTACATGCTATGGCTCTCTGCAGATCTGAAATTCAGGATCAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
||
| CDS GCA 90 bp | CTCATAACCCTTTGGAGTAGCTGCTTGAAGGTGCATCCCGAATTTTaGAGCACTCATCATGATAGAGTGCAAGATATTGTTCCCATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LITLWSSCLKVHPEF*STHHDRVQDIVPIP Trigger: GGGGATGGGAACAATATCTTGCACTCTATCATGATGAGTGCTGCAAAATTCGGGATGCACCTTCAAGCAGCTACTCCAAAGGGTTATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
||
| CDS-3UTR CAA 90 bp | TTGATTTCTCCATTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGCTTTGGAGTAGCTGCTaGAAGGTGCATCCCGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: LISPLVLRPMNLPAVDCLLWSSC*KVHPEF Trigger: AAATTCGGGATGCACCTTCAAGCAGCTACTCCAAAG...CAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAATGGAGAAATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGCCAGGGAGGACATTTCAGTGGTGTGGGGGAACCATGTAACAGGTAAACTTCCAGTGGATCATTaGTCATTGACAACTTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: KGAREDISVVWGNHVTGKLPVDH*SLTTWY Trigger: GTACCAAGTTGTCAATGACAAATGATCCACTGGAAG...TTTACCTGTTACATGGTTCCCCCACACCACTGAAATGTCCTCCCTGGCTCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS-3UTR CAA 90 bp | TTGATTTCTCCATTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGCGTAACCTGGTAACCTaGGAAAGCTTGAAGACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LISPLVLRPMNLPAVDCLRNLVT*ESLKTL Trigger: AAGCGTCTTCAAGCTTTCCAAGGTTACCAGGTTACG...CAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAATGGAGAAATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS TCA 90 bp | CTTTGGACTGGCTTCCCACACCAAAAATGTCGAACCACAGAAGTGTaGCCCTTTCTAAGAGCTGCATTGTTGAGCAGGATCCTCAAATTA | + |
|
Preference number: 5 (lower is better) Translates to: LWTGFPHQKCRTTEV*PFLRAALLSRILKL Trigger: TAATTTGAGGATCCTGCTCAACAATGCAGCTCTTAGAAAGGGTCACACTTCTGTGGTTCGACATTTTTGGTGTGGGAAGCCAGTCCAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
||
| CDS-3UTR CAA 90 bp | CAGCTGTCAGCCGTTGACTGCCACCTTCTCAGCATTCATGTCAAGAATGGTAATCTAAGAGCTGCATTGTaGAGCAGGATCCTCAAATTA | + |
|
Preference number: 5 (lower is better) Translates to: QLSAVDCHLLSIHVKNGNLRAAL*SRILKL Trigger: TAATTTGAGGATCCTGCTCAACAATGCAGCTCTTAG...ATTACCATTCTTGACATGAATGCTGAGAAGGTGGCAGTCAACGGCTGACAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS-3UTR CAA 90 bp | TTGATTTCTCCATTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGACCCAAGTGAATGTCTaGTGTGGTAAGAAAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LISPLVLRPMNLPAVDCLTQVNV*CGKKGR Trigger: CCTTCCTTTCTTACCACACAAGACATTCACTTGGGT...CAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAATGGAGAAATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR CAA 90 bp | TTGATTTCTCCATTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGAAGTCTGACAGTCCATaGACAATTGGGATGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LISPLVLRPMNLPAVDCLKSDSP*TIGMDA Trigger: AGCATCCATCCCAATTGTCAATGGACTGTCAGACTT...CAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAATGGAGAAATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGCCAGGGAGGACATTTCAGTGGTGTGGGGGAACCATGTAACAGGTAAAGTGGATCATTTGTCATaGACAACTTGGTACCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: KGAREDISVVWGNHVTGKVDHLS*TTWYHS Trigger: AGAATGGTACCAAGTTGTCAATGACAAATGATCCAC...TTTACCTGTTACATGGTTCCCCCACACCACTGAAATGTCCTCCCTGGCTCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
||
| CDS-3UTR CAA 90 bp | TTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGGCAAATGTTTATTCTGTAATTAATACATaGCCTCCACGTGCTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVLRPMNLPAVDCLANVYSVINT*PPRAAS Trigger: GGAAGCAGCACGTGGAGGCAATGTATTAATTACAGA...ATAAACATTTGCCAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR CAA 90 bp | TTGATTTCTCCATTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGTTTCTGTGGACAGTCTaGTTCGAGTACTTCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LISPLVLRPMNLPAVDCLFLWTV*FEYFFS Trigger: AGAAAAGAAGTACTCGAACAAGACTGTCCACAGAAA...CAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAATGGAGAAATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR CAA 90 bp | TTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGGCAAATGTTTATCTTCCAGTGGATCATTaGTCATTGACAACTTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LVLRPMNLPAVDCLANVYLPVDH*SLTTWY Trigger: GTACCAAGTTGTCAATGACAAATGATCCACTGGAAG...ATAAACATTTGCCAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
||
| CDS-3UTR CAA 90 bp | TTGATTTCTCCATTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGTATTCTCCTTTCTGCTaGATCCTGAATTTCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: LISPLVLRPMNLPAVDCLYSPFC*ILNFRS Trigger: AGATCTGAAATTCAGGATCAAGCAGAAAGGAGAATA...CAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAATGGAGAAATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
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| CDS-3UTR CAA 90 bp | TTGGTCTTAAGGCCCATGAACTTACCAGCAGTTGACTGCCTGGCAAATGTTTATGTGGATCATTTGTCATaGACAACTTGGTACCATTCT | + |
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Preference number: 5 (lower is better) Translates to: LVLRPMNLPAVDCLANVYVDHLS*TTWYHS Trigger: AGAATGGTACCAAGTTGTCAATGACAAATGATCCAC...ATAAACATTTGCCAGGCAGTCAACTGCTGGTAAGTTCATGGGCCTTAAGACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
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| CDS-3UTR CAA 90 bp | TGCATCTCAGGTTTTCCTTTATTGCTCAGAGTCATACAACATGTTAAGCTTAGTATAGAGTGCAAGATATaGTTCCCATCCCCTATCCAG | + |
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Preference number: 5 (lower is better) Translates to: CISGFPLLLRVIQHVKLSIECKI*FPSPIQ Trigger: CTGGATAGGGGATGGGAACAATATCTTGCACTCTAT...ACTAAGCTTAACATGTTGTATGACTCTGAGCAATAAAGGAAAACCTGAGATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| CDS-3UTR CAA 90 bp | GCTTACTCATTTAAGTCATCAATGTCTGTTAAAGAATATCAGTCAACCAGACTGATAGAGTGCAAGATATaGTTCCCATCCCCTATCCAG | + |
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Preference number: 5 (lower is better) Translates to: AYSFKSSMSVKEYQSTRLIECKI*FPSPIQ Trigger: CTGGATAGGGGATGGGAACAATATCTTGCACTCTAT...CAGTCTGGTTGACTGATATTCTTTAACAGACATTGATGACTTAAATGAGTAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
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| CDS-3UTR CAA 90 bp | GATACCCAAATGTCATTCAGAGGTTGTAAATTGAAGAGAGTGTTTAAACCAAGTTACTGCTCTGCTAGCTaGACTATATTAGGATCTGGC | + |
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Preference number: 5 (lower is better) Translates to: DTQMSFRGCKLKRVFKPSYCSAS*TILGSG Trigger: GCCAGATCCTAATATAGTCAAGCTAGCAGAGCAGTA...ACTTGGTTTAAACACTCTCTTCAATTTACAACCTCTGAATGACATTTGGGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
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| CDS-3UTR CAA 90 bp | CATGTAACAGGTAAAACTGTTCAATCTGTTTTAGTGGTTTACAGATCTGCATCTTACTGCTCTGCTAGCTaGACTATATTAGGATCTGGC | + |
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Preference number: 5 (lower is better) Translates to: HVTGKTVQSVLVVYRSASYCSAS*TILGSG Trigger: GCCAGATCCTAATATAGTCAAGCTAGCAGAGCAGTA...AGATGCAGATCTGTAAACCACTAAAACAGATTGAACAGTTTTACCTGTTACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| CDS-3UTR CAA 90 bp | CATGTAACAGGTAAAACTGTTCAATCTGTTTTAGTGGTTTACAGATCTGCATCTTCTGTAATTAATACATaGCCTCCACGTGCTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: HVTGKTVQSVLVVYRSASSVINT*PPRAAS Trigger: GGAAGCAGCACGTGGAGGCAATGTATTAATTACAGA...AGATGCAGATCTGTAAACCACTAAAACAGATTGAACAGTTTTACCTGTTACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| CDS-3UTR CAA 90 bp | GCTTACTCATTTAAGTCATCAATGTCTGTTAAAGAATATCAGTCAACCAGACTGCTAAGAGCTGCATTGTaGAGCAGGATCCTCAAATTA | + |
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Preference number: 5 (lower is better) Translates to: AYSFKSSMSVKEYQSTRLLRAAL*SRILKL Trigger: TAATTTGAGGATCCTGCTCAACAATGCAGCTCTTAG...CAGTCTGGTTGACTGATATTCTTTAACAGACATTGATGACTTAAATGAGTAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049910.13 |
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| CDS-3UTR CAA 90 bp | CATGTAACAGGTAAAACTGTTCAATCTGTTTTAGTGGTTTACAGATCTGCATCTTATTCTCCTTTCTGCTaGATCCTGAATTTCAGATCT | + |
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Preference number: 5 (lower is better) Translates to: HVTGKTVQSVLVVYRSASYSPFC*ILNFRS Trigger: AGATCTGAAATTCAGGATCAAGCAGAAAGGAGAATA...AGATGCAGATCTGTAAACCACTAAAACAGATTGAACAGTTTTACCTGTTACATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115528.3 |
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| CDS CAA 72 bp | GGTGAGGAGGTCACGGCCTTTCAGCTGTACTTGACTTaGGACTGGCTTCCCACACCAAAAATGTCGAACCAC | + |
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Preference number: 6 (lower is better) Translates to: GEEVTAFQLYLT*DWLPTPKMSNH Trigger: GTGGTTCGACATTTTTGGTGTGGGAAGCCAGTCCAAAGTCAAGTACAGCTGAAAGGCCGTGACCTCCTCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 90 bp | ACGAGCGGTGTCTGTGAGACTTTCATTCACACCCAAGTGAATGTCTaGTGTGGTAAGAAAGGAAGGGTGTCCTCCCAGCAGAGCAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: TSGVCETFIHTQVNV*CGKKGRVSSQQSKA Trigger: GGCTTTGCTCTGCTGGGAGGACACCCTTCCTTTCTTACCACACAAGACATTCACTTGGGTGTGAATGAAAGTCTCACAGACACCGCTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 72 bp | CTTCAAGGTGAGGAGGTCACGGCCTTTCAGCTGTACTaGACTTTGGACTGGCTTCCCACACCAAAAATGTCG | + |
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Preference number: 6 (lower is better) Translates to: LQGEEVTAFQLY*TLDWLPTPKMS Trigger: CGACATTTTTGGTGTGGGAAGCCAGTCCAAAGTCAAGTACAGCTGAAAGGCCGTGACCTCCTCACCTTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 90 bp | GTTCTTCAAGGTGAGGAGGTCACGGCCTTTCAGCTGTACTTGACTTaGGACTGGCTTCCCACACCAAAAATGTCGAACCACAGAAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VLQGEEVTAFQLYLT*DWLPTPKMSNHRSV Trigger: CACACTTCTGTGGTTCGACATTTTTGGTGTGGGAAGCCAGTCCAAAGTCAAGTACAGCTGAAAGGCCGTGACCTCCTCACCTTGAAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS TCA 72 bp | TTCAAGGTGAGGAGGTCACGGCCTTTCAGCTGTACTTaGCTTTGGACTGGCTTCCCACACCAAAAATGTCGA | + |
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Preference number: 6 (lower is better) Translates to: FKVRRSRPFSCT*LWTGFPHQKCR Trigger: TCGACATTTTTGGTGTGGGAAGCCAGTCCAAAGTCAAGTACAGCTGAAAGGCCGTGACCTCCTCACCTTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS TCA 72 bp | GCCTCCACGTGCTGCTTCCAGTGGATCATTTGTCATTaGCAACTTGGTACCATTCTCCTTGGCATACTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASTCCFQWIICH*QLGTILLGILL Trigger: GAGCAGTATGCCAAGGAGAATGGTACCAAGTTGTCAATGACAAATGATCCACTGGAAGCAGCACGTGGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CCA 72 bp | GAGGTCACGGCCTTTCAGCTGTACTTGACTTTGGACTaGCTTCCCACACCAAAAATGTCGAACCACAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: EVTAFQLYLTLD*LPTPKMSNHRS Trigger: ACTTCTGTGGTTCGACATTTTTGGTGTGGGAAGCCAGTCCAAAGTCAAGTACAGCTGAAAGGCCGTGACCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 90 bp | TGTGAAGTTCTTCAAGGTGAGGAGGTCACGGCCTTTCAGCTGTACTaGACTTTGGACTGGCTTCCCACACCAAAAATGTCGAACCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: CEVLQGEEVTAFQLY*TLDWLPTPKMSNHR Trigger: TCTGTGGTTCGACATTTTTGGTGTGGGAAGCCAGTCCAAAGTCAAGTACAGCTGAAAGGCCGTGACCTCCTCACCTTGAAGAACTTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS TCA 72 bp | GGCTTCCCACACCAAAAATGTCGAACCACAGAAGTGTaGCCCTTTCTAAGAGCTGCATTGTTGAGCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: GFPHQKCRTTEV*PFLRAALLSRI Trigger: GATCCTGCTCAACAATGCAGCTCTTAGAAAGGGTCACACTTCTGTGGTTCGACATTTTTGGTGTGGGAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS TCA 72 bp | CGAGCGGTGTCTGTGAGACTTTCATTCACACCCAAGTaGATGTCTTGTGTGGTAAGAAAGGAAGGGTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: RAVSVRLSFTPK*MSCVVRKEGCP Trigger: AGGACACCCTTCCTTTCTTACCACACAAGACATTCACTTGGGTGTGAATGAAAGTCTCACAGACACCGCTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 72 bp | GTCTGTGAGACTTTCATTCACACCCAAGTGAATGTCTaGTGTGGTAAGAAAGGAAGGGTGTCCTCCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VCETFIHTQVNV*CGKKGRVSSQQ Trigger: CTGCTGGGAGGACACCCTTCCTTTCTTACCACACAAGACATTCACTTGGGTGTGAATGAAAGTCTCACAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 72 bp | CGTGCTGCTTCCAGTGGATCATTTGTCATTGACAACTaGGTACCATTCTCCTTGGCATACTGCTCTGCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAASSGSFVIDN*VPFSLAYCSAS Trigger: GCTAGCAGAGCAGTATGCCAAGGAGAATGGTACCAAGTTGTCAATGACAAATGATCCACTGGAAGCAGCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 72 bp | TGCCTCCACGTGCTGCTTCCAGTGGATCATTTGTCATaGACAACTTGGTACCATTCTCCTTGGCATACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CLHVLLPVDHLS*TTWYHSPWHTA Trigger: AGCAGTATGCCAAGGAGAATGGTACCAAGTTGTCAATGACAAATGATCCACTGGAAGCAGCACGTGGAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 90 bp | GTCAGACGCAGCCACTTTGGCAGTCTTCATCGTAACCTGGTAACCTaGGAAAGCTTGAAGACGCTTTTTCTTCTCATCCTCTTGTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VRRSHFGSLHRNLVT*ESLKTLFLLILLSH Trigger: ATGGGACAAGAGGATGAGAAGAAAAAGCGTCTTCAAGCTTTCCAAGGTTACCAGGTTACGATGAAGACTGCCAAAGTGGCTGCGTCTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 90 bp | TGCATCCCGAATTTTGCAGCACTCATCATGATAGAGTGCAAGATATaGTTCCCATCCCCTATCCAGCTGAGGGTAAGACCTTTGAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: CIPNFAALIMIECKI*FPSPIQLRVRPLRE Trigger: CTCTCTCAAAGGTCTTACCCTCAGCTGGATAGGGGATGGGAACAATATCTTGCACTCTATCATGATGAGTGCTGCAAAATTCGGGATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 90 bp | TTGCCTCCACGTGCTGCTTCCAGTGGATCATTTGTCATTGACAACTaGGTACCATTCTCCTTGGCATACTGCTCTGCTAGCTTGACTATA | + |
|
Preference number: 6 (lower is better) Translates to: LPPRAASSGSFVIDN*VPFSLAYCSASLTI Trigger: TATAGTCAAGCTAGCAGAGCAGTATGCCAAGGAGAATGGTACCAAGTTGTCAATGACAAATGATCCACTGGAAGCAGCACGTGGAGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS GCA 72 bp | TGCATCCCGAATTTTGCAGCACTCATCATGATAGAGTaGAAGATATTGTTCCCATCCCCTATCCAGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: CIPNFAALIMIE*KILFPSPIQLR Trigger: CCTCAGCTGGATAGGGGATGGGAACAATATCTTGCACTCTATCATGATGAGTGCTGCAAAATTCGGGATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 90 bp | TTAATACATTGCCTCCACGTGCTGCTTCCAGTGGATCATTTGTCATaGACAACTTGGTACCATTCTCCTTGGCATACTGCTCTGCTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LIHCLHVLLPVDHLS*TTWYHSPWHTALLA Trigger: AGCTAGCAGAGCAGTATGCCAAGGAGAATGGTACCAAGTTGTCAATGACAAATGATCCACTGGAAGCAGCACGTGGAGGCAATGTATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 90 bp | AGCCACTTTGGCAGTCTTCATCGTAACCTGGTAACCTTGGAAAGCTaGAAGACGCTTTTTCTTCTCATCCTCTTGTCCCATGCTTATCCA | + |
|
Preference number: 6 (lower is better) Translates to: SHFGSLHRNLVTLES*KTLFLLILLSHAYP Trigger: TGGATAAGCATGGGACAAGAGGATGAGAAGAAAAAGCGTCTTCAAGCTTTCCAAGGTTACCAGGTTACGATGAAGACTGCCAAAGTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS TCA 72 bp | CTGAATTTCAGATCTGCAGAGAGCCATAGCATGTACTaGATCTCCTCTCCTGTGAAGTTCTTCAAGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LNFRSAESHSMY*ISSPVKFFKVR Trigger: CCTCACCTTGAAGAACTTCACAGGAGAGGAGATTCAGTACATGCTATGGCTCTCTGCAGATCTGAAATTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 72 bp | ATTAGGATCTGGCTCATAACCCTTTGGAGTAGCTGCTaGAAGGTGCATCCCGAATTTTGCAGCACTCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: IRIWLITLWSSC*KVHPEFCSTHH Trigger: ATGATGAGTGCTGCAAAATTCGGGATGCACCTTCAAGCAGCTACTCCAAAGGGTTATGAGCCAGATCCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 72 bp | GGCAGTCTTCATCGTAACCTGGTAACCTTGGAAAGCTaGAAGACGCTTTTTCTTCTCATCCTCTTGTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GSLHRNLVTLES*KTLFLLILLSH Trigger: ATGGGACAAGAGGATGAGAAGAAAAAGCGTCTTCAAGCTTTCCAAGGTTACCAGGTTACGATGAAGACTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 72 bp | AGCCACTTTGGCAGTCTTCATCGTAACCTGGTAACCTaGGAAAGCTTGAAGACGCTTTTTCTTCTCATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SHFGSLHRNLVT*ESLKTLFLLIL Trigger: GAGGATGAGAAGAAAAAGCGTCTTCAAGCTTTCCAAGGTTACCAGGTTACGATGAAGACTGCCAAAGTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 90 bp | CTTGACTATATTAGGATCTGGCTCATAACCCTTTGGAGTAGCTGCTaGAAGGTGCATCCCGAATTTTGCAGCACTCATCATGATAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LDYIRIWLITLWSSC*KVHPEFCSTHHDRV Trigger: CACTCTATCATGATGAGTGCTGCAAAATTCGGGATGCACCTTCAAGCAGCTACTCCAAAGGGTTATGAGCCAGATCCTAATATAGTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS GCA 72 bp | ATGTCGAACCACAGAAGTGTGACCCTTTCTAAGAGCTaGATTGTTGAGCAGGATCCTCAAATTAGACAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: MSNHRSVTLSKS*IVEQDPQIRQH Trigger: ATGCTGTCTAATTTGAGGATCCTGCTCAACAATGCAGCTCTTAGAAAGGGTCACACTTCTGTGGTTCGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS GCA 72 bp | TATATTAGGATCTGGCTCATAACCCTTTGGAGTAGCTaGTTGAAGGTGCATCCCGAATTTTGCAGCACTCAT | + |
|
Preference number: 6 (lower is better) Translates to: YIRIWLITLWSS*LKVHPEFCSTH Trigger: ATGAGTGCTGCAAAATTCGGGATGCACCTTCAAGCAGCTACTCCAAAGGGTTATGAGCCAGATCCTAATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 72 bp | AATTTTGCAGCACTCATCATGATAGAGTGCAAGATATaGTTCCCATCCCCTATCCAGCTGAGGGTAAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: NFAALIMIECKI*FPSPIQLRVRP Trigger: AGGTCTTACCCTCAGCTGGATAGGGGATGGGAACAATATCTTGCACTCTATCATGATGAGTGCTGCAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS TCA 72 bp | GTAATCAGCCAGGATCTGGATAGGATGATACAAGTCTaGCAGTCCATTGACAATTGGGATGGATGCTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VISQDLDRMIQV*QSIDNWDGCFF Trigger: AAAGAAGCATCCATCCCAATTGTCAATGGACTGTCAGACTTGTATCATCCTATCCAGATCCTGGCTGATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS GCA 72 bp | CTTTGGAGTAGCTGCTTGAAGGTGCATCCCGAATTTTaGAGCACTCATCATGATAGAGTGCAAGATATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LWSSCLKVHPEF*STHHDRVQDIV Trigger: AACAATATCTTGCACTCTATCATGATGAGTGCTGCAAAATTCGGGATGCACCTTCAAGCAGCTACTCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 72 bp | TGTCCCATGCTTATCCAAGTATCTGTAATTAATACATaGCCTCCACGTGCTGCTTCCAGTGGATCATTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: CPMLIQVSVINT*PPRAASSGSFV Trigger: GACAAATGATCCACTGGAAGCAGCACGTGGAGGCAATGTATTAATTACAGATACTTGGATAAGCATGGGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 90 bp | TCATCCTCTTGTCCCATGCTTATCCAAGTATCTGTAATTAATACATaGCCTCCACGTGCTGCTTCCAGTGGATCATTTGTCATTGACAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSCPMLIQVSVINT*PPRAASSGSFVIDN Trigger: GTTGTCAATGACAAATGATCCACTGGAAGCAGCACGTGGAGGCAATGTATTAATTACAGATACTTGGATAAGCATGGGACAAGAGGATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 72 bp | GGATCATTTGTCATTGACAACTTGGTACCATTCTCCTaGGCATACTGCTCTGCTAGCTTGACTATATTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSFVIDNLVPFS*AYCSASLTILG Trigger: TCCTAATATAGTCAAGCTAGCAGAGCAGTATGCCAAGGAGAATGGTACCAAGTTGTCAATGACAAATGATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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| CDS CAA 72 bp | TTCCCTTGCAATAAAGGTAAATATTCTCCTTTCTGCTaGATCCTGAATTTCAGATCTGCAGAGAGCCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: FPCNKGKYSPFC*ILNFRSAESHS Trigger: GCTATGGCTCTCTGCAGATCTGAAATTCAGGATCAAGCAGAAAGGAGAATATTTACCTTTATTGCAAGGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049910.13 ENSMUST00000115528.3 |
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