Pregenerated sensors for OSTF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024725Ensembl transcript IDs: ENSMUST00000025631.7, ENSMUST00000236615.2, ENSMUST00000236728.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACTATGTCTTTATGGCCACCGTGGCAGGCCCAGTACAGGGCTGTaGTTCCAGCTTTGTCCAGGCCGTTCACACCCACCCGGTTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: PLCLYGHRGRPSTGL*FQLCPGRSHPPGCP Trigger: TGGACAACCGGGTGGGTGTGAACGGCCTGGACAAAGCTGGAAGCACAGCCCTGTACTGGGCCTGCCACGGTGGCCATAAAGACATAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| 3UTR GCA 90 bp | GGGGGAATCAGTCTGAGTCTTCGTCATCGAGGTAGTCCTCGGCGTTaGTTAACGTTCGAGCCCCATCTGTTCCCTGCTGCTTCTTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: GGISLSLRHRGSPRR*LTFEPHLFPAASSS Trigger: TGAAGAAGAAGCAGCAGGGAACAGATGGGGCTCGAACGTTAAGCAACGCCGAGGACTACCTCGATGACGAAGACTCAGACTGATTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| 3UTR TCA 90 bp | CCTGGGGCCTCCAGTCTCTTGAGGGTTAGATGCATCATCTCTGAATaGACACAGACCTTGAAGTCCTCTACTGTATGTGTGTTAGGGGCC | + |
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Preference number: 1 (lower is better) Translates to: PGASSLLRVRCIISE*TQTLKSSTVCVLGA Trigger: GGCCCCTAACACACATACAGTAGAGGACTTCAAGGTCTGTGTTCATTCAGAGATGATGCATCTAACCCTCAAGAGACTGGAGGCCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR TCA 90 bp | GTGTTATCTTTTCTTAGATATGCAATTGTGTTCTGTGTTGAACTGTaGGCCAGGCGGTGGTGGCCCACGCCTTTAAACCCAGCACTTGGG | + |
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Preference number: 1 (lower is better) Translates to: VLSFLRYAIVFCVEL*ARRWWPTPLNPALG Trigger: CCCAAGTGCTGGGTTTAAAGGCGTGGGCCACCACCGCCTGGCTCACAGTTCAACACAGAACACAATTGCATATCTAAGAAAAGATAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR GCA 90 bp | CCTTCTCAGCTTCTTTCAGCCTTCCCTAATTCAACAAGGGTCAGCTaGTTCTGTCCATTGGTTGGGTTCAAACATCTGCATCTGACTCTT | + |
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Preference number: 1 (lower is better) Translates to: PSQLLSAFPNSTRVS*FCPLVGFKHLHLTL Trigger: AAGAGTCAGATGCAGATGTTTGAACCCAACCAATGGACAGAAGCAGCTGACCCTTGTTGAATTAGGGAAGGCTGAAAGAAGCTGAGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR TCA 90 bp | TTAGAACTTTTAATGAAGTATCACACCAAGGCTTCCTGTATAGCCTaGCTCAGCAAAGGAATCCAAACCCTTGTGAGGCAGACACGCGTT | + |
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Preference number: 1 (lower is better) Translates to: LELLMKYHTKASCIA*LSKGIQTLVRQTRV Trigger: AACGCGTGTCTGCCTCACAAGGGTTTGGATTCCTTTGCTGAGTCAGGCTATACAGGAAGCCTTGGTGTGATACTTCATTAAAAGTTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR CCA 90 bp | ATGTATTTTATACAACAAAGTATCTCTTCACTTATTGGCAAGGCGTaGGTGAGAATGACCCACCCTCACAACGACTCCTCACAGATCACA | + |
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Preference number: 1 (lower is better) Translates to: MYFIQQSISSLIGKA*VRMTHPHNDSSQIT Trigger: TGTGATCTGTGAGGAGTCGTTGTGAGGGTGGGTCATTCTCACCCACGCCTTGCCAATAAGTGAAGAGATACTTTGTTGTATAAAATACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025631.7 ENSMUST00000236728.2 |
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| 3UTR CCA 90 bp | GTGAGCATATATGTATTTTATACAACAAAGTATCTCTTCACTTATTaGCAAGGCGTGGGTGAGAATGACCCACCCTCACAACGACTCCTC | + |
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Preference number: 1 (lower is better) Translates to: VSIYVFYTTKYLFTY*QGVGENDPPSQRLL Trigger: GAGGAGTCGTTGTGAGGGTGGGTCATTCTCACCCACGCCTTGCCAATAAGTGAAGAGATACTTTGTTGTATAAAATACATATATGCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025631.7 ENSMUST00000236728.2 |
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| 3UTR CCA 90 bp | TGTTATCTGAGAGAGTCAAGTTCATGCTTCCTAACAACGTCGCCCTaGAAATTACGGCAGCTTTCACAAAGAAACAGTCATGGTTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: CYLRESSSCFLTTSP*KLRQLSQRNSHGFL Trigger: TAGAAAACCATGACTGTTTCTTTGTGAAAGCTGCCGTAATTTCCAGGGCGACGTTGTTAGGAAGCATGAACTTGACTCTCTCAGATAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR CCA 90 bp | AACGTCGCCCTGGAAATTACGGCAGCTTTCACAAAGAAACAGTCATaGTTTTCTAAGCTTCCACACTTTAATCAAACTGAAATGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: NVALEITAAFTKKQS*FSKLPHFNQTEMRS Trigger: TGACCTCATTTCAGTTTGATTAAAGTGTGGAAGCTTAGAAAACCATGACTGTTTCTTTGTGAAAGCTGCCGTAATTTCCAGGGCGACGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR-3UTR GCA 90 bp | GCGTTGCTTAACGTTCGAGCCCCATCTGTTCCCTGCTGCTTCTTCTTCAGGAGCCCCAGTACAGGGCTGTaGTTCCAGCTTTGTCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: ALLNVRAPSVPCCFFFRSPSTGL*FQLCPG Trigger: GCCTGGACAAAGCTGGAAGCACAGCCCTGTACTGGG...GCTCCTGAAGAAGAAGCAGCAGGGAACAGATGGGGCTCGAACGTTAAGCAACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| 3UTR-3UTR CCA 90 bp | ACGTTCGAGCCCCATCTGTTCCCTGCTGCTTCTTCTTCAGGAGCGATGCACAGGTCCACTATGTCTTTATaGCCACCGTGGCAGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: TFEPHLFPAASSSGAMHRSTMSL*PPWQAQ Trigger: CTGGGCCTGCCACGGTGGCCATAAAGACATAGTGGA...CCTGTGCATCGCTCCTGAAGAAGAAGCAGCAGGGAACAGATGGGGCTCGAACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| 3UTR-3UTR GCA 90 bp | GCGTTGCTTAACGTTCGAGCCCCATCTGTTCCCTGCTGCTTCTTCTTCAGGAGCGGATCAGTCCTGTTCTaGCCTTGCATGTCCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: ALLNVRAPSVPCCFFFRSGSVLF*PCMSLS Trigger: GGAAAGGGACATGCAAGGGCAGAACAGGACTGATCC...GCTCCTGAAGAAGAAGCAGCAGGGAACAGATGGGGCTCGAACGTTAAGCAACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| 3UTR-3UTR TCA 90 bp | GATGAAATACCCGACAGTAAGGAGTGGGAACTTATAGAGCCCACCTCCAGCAGAAGGCAGGTGGATTTCTaGGTTCGAGGCCAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: DEIPDSKEWELIEPTSSRRQVDF*VRGQPG Trigger: ACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCT...TCTGCTGGAGGTGGGCTCTATAAGTTCCCACTCCTTACTGTCGGGTATTTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR-3UTR TCA 90 bp | GATGAAATACCCGACAGTAAGGAGTGGGAACTTATAGAGCCCACCTCCAGCAGAAAAAGGGACCTAGCATaGCTGCCCTCCAAAAGACCC | + |
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Preference number: 2 (lower is better) Translates to: DEIPDSKEWELIEPTSSRKRDLA*LPSKRP Trigger: GGGTCTTTTGGAGGGCAGTCATGCTAGGTCCCTTTT...TCTGCTGGAGGTGGGCTCTATAAGTTCCCACTCCTTACTGTCGGGTATTTCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR-3UTR CCA 90 bp | TATGTCTTTATGGCCACCGTGGCAGGCCCAGTACAGGGCTGTGCTTCCAGCTTTACCCAGGCTCCGGAATaGCAAAAGCAAAAGAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: YVFMATVAGPVQGCASSFTQAPE*QKQKKF Trigger: AAACTTCTTTTGCTTTTGCCATTCCGGAGCCTGGGT...AAAGCTGGAAGCACAGCCCTGTACTGGGCCTGCCACGGTGGCCATAAAGACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| 3UTR-3UTR TCA 90 bp | CCTAATTCAACAAGGGTCAGCTGCTTCTGTCCATTGGTTGGGTTCAAACATCTGCCCAAGGCTATTTCCTaGGGCTATGGAGGGCTCACA | + |
|
Preference number: 2 (lower is better) Translates to: PNSTRVSCFCPLVGFKHLPKAIS*GYGGLT Trigger: TGTGAGCCCTCCATAGCCTCAGGAAATAGCCTTGGG...CAGATGTTTGAACCCAACCAATGGACAGAAGCAGCTGACCCTTGTTGAATTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR-3UTR TCA 90 bp | TCCATATTCCATTCCCTGTCCCTCCCCATCCACCCATCGACTGCTCCCCATACCAGAAAACATGTTATCTaGGAGAGTCAAGTTCATGCT | + |
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Preference number: 2 (lower is better) Translates to: SIFHSLSLPIHPSTAPHTRKHVI*ESQVHA Trigger: AGCATGAACTTGACTCTCTCAGATAACATGTTTTCT...GGTATGGGGAGCAGTCGATGGGTGGATGGGGAGGGACAGGGAATGGAATATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR-3UTR TCA 90 bp | GATGAAATACCCGACAGTAAGGAGTGGGAACTTATAGAGCCCACCTCCAGCAGAAGGAACACAGCATTGTaGTTCTTCTGTGCTAATCAA | + |
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Preference number: 2 (lower is better) Translates to: DEIPDSKEWELIEPTSSRRNTAL*FFCANQ Trigger: TTGATTAGCACAGAAGAATCACAATGCTGTGTTCCT...TCTGCTGGAGGTGGGCTCTATAAGTTCCCACTCCTTACTGTCGGGTATTTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR-3UTR CCA 90 bp | CCTAATTCAACAAGGGTCAGCTGCTTCTGTCCATTGGTTGGGTTCAAACATCTGTATTTCCTGAGGCTATaGAGGGCTCACAAAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PNSTRVSCFCPLVGFKHLYFLRL*RAHKKG Trigger: TCCCTTTTTGTGAGCCCTCCATAGCCTCAGGAAATA...CAGATGTTTGAACCCAACCAATGGACAGAAGCAGCTGACCCTTGTTGAATTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR-3UTR TCA 90 bp | TTGGTTGGGTTCAAACATCTGCATCTGACTCTTTCAGCTACTTGTTGGGTCTATGCTTCCTGTATAGCCTaGCTCAGCAAAGGAATCCAA | + |
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Preference number: 2 (lower is better) Translates to: LVGFKHLHLTLSATCWVYASCIA*LSKGIQ Trigger: TTGGATTCCTTTGCTGAGTCAGGCTATACAGGAAGC...ATAGACCCAACAAGTAGCTGAAAGAGTCAGATGCAGATGTTTGAACCCAACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR-3UTR TCA 90 bp | TTGGTTGGGTTCAAACATCTGCATCTGACTCTTTCAGCTACTTGTTGGGTCTATAAAACTAGGAAGCTGTaGGAGGAACACAGCATTGTG | + |
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Preference number: 2 (lower is better) Translates to: LVGFKHLHLTLSATCWVYKTRKL*EEHSIV Trigger: CACAATGCTGTGTTCCTCTCACAGCTTCCTAGTTTT...ATAGACCCAACAAGTAGCTGAAAGAGTCAGATGCAGATGTTTGAACCCAACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR GCA 72 bp | CTTTATGGCCACCGTGGCAGGCCCAGTACAGGGCTGTaGTTCCAGCTTTGTCCAGGCCGTTCACACCCACCC | + |
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Preference number: 3 (lower is better) Translates to: LYGHRGRPSTGL*FQLCPGRSHPP Trigger: GGGTGGGTGTGAACGGCCTGGACAAAGCTGGAAGCACAGCCCTGTACTGGGCCTGCCACGGTGGCCATAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| 3UTR GCA 72 bp | CCCATCTGTTCCCTGCTGCTTCTTCTTCAGGAGCGATaGACAGGCAGCGTTGGTGGCCATGTCCAAGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: PICSLLLLLQER*TGSVGGHVQGQ Trigger: CTGGCCTTGGACATGGCCACCAACGCTGCCTGTGCATCGCTCCTGAAGAAGAAGCAGCAGGGAACAGATGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| 3UTR-3UTR CAA 90 bp | ACGTTCGAGCCCCATCTGTTCCCTGCTGCTTCTTCTTCAGGAGCGATGCACAGGGCTGTGCTTCCAGCTTaGTCCAGGCCGTTCACACCC | + |
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Preference number: 3 (lower is better) Translates to: TFEPHLFPAASSSGAMHRAVLPA*SRPFTP Trigger: GGGTGTGAACGGCCTGGACAAAGCTGGAAGCACAGC...CCTGTGCATCGCTCCTGAAGAAGAAGCAGCAGGGAACAGATGGGGCTCGAACGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| 3UTR GCA 72 bp | GCGTTGCTTAACGTTCGAGCCCCATCTGTTCCCTGCTaGTTCTTCTTCAGGAGCGATGCACAGGCAGCGTTG | + |
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Preference number: 3 (lower is better) Translates to: ALLNVRAPSVPC*FFFRSDAQAAL Trigger: CAACGCTGCCTGTGCATCGCTCCTGAAGAAGAAGCAGCAGGGAACAGATGGGGCTCGAACGTTAAGCAACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| 3UTR GCA 72 bp | AGTCTGAGTCTTCGTCATCGAGGTAGTCCTCGGCGTTaGTTAACGTTCGAGCCCCATCTGTTCCCTGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: SLSLRHRGSPRR*LTFEPHLFPAA Trigger: AGCAGCAGGGAACAGATGGGGCTCGAACGTTAAGCAACGCCGAGGACTACCTCGATGACGAAGACTCAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| 3UTR CCA 72 bp | CTCAAGGGGAGGTCCCAAGGCTATTTCCTGAGGCTATaGAGGGCTCACAAAAAGGGACCTAGCATGACTGCC | + |
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Preference number: 3 (lower is better) Translates to: LKGRSQGYFLRL*RAHKKGPSMTA Trigger: GGCAGTCATGCTAGGTCCCTTTTTGTGAGCCCTCCATAGCCTCAGGAAATAGCCTTGGGACCTCCCCTTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR TCA 72 bp | AGTTCCAGCTCAAGGGGAGGTCCCAAGGCTATTTCCTaGGGCTATGGAGGGCTCACAAAAAGGGACCTAGCA | + |
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Preference number: 3 (lower is better) Translates to: SSSSRGGPKAIS*GYGGLTKRDLA Trigger: TGCTAGGTCCCTTTTTGTGAGCCCTCCATAGCCTCAGGAAATAGCCTTGGGACCTCCCCTTGAGCTGGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR CCA 72 bp | CACCTCCAGCAGAAAGATAGGGCATCAAGTGAGCCATaGGGTTGTCATCCCACAGTCACACCTCTGACCCAT | + |
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Preference number: 3 (lower is better) Translates to: HLQQKDRASSEP*GCHPTVTPLTH Trigger: ATGGGTCAGAGGTGTGACTGTGGGATGACAACCCCATGGCTCACTTGATGCCCTATCTTTCTGCTGGAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR-3UTR CAA 90 bp | TCCATATTCCATTCCCTGTCCCTCCCCATCCACCCATCGACTGCTCCCCATACCTCCAGATTAAGACTGTaGGTCCTCCTGCATAATCGC | + |
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Preference number: 3 (lower is better) Translates to: SIFHSLSLPIHPSTAPHTSRLRL*VLLHNR Trigger: GCGATTATGCAGGAGGACCAACAGTCTTAATCTGGA...GGTATGGGGAGCAGTCGATGGGTGGATGGGGAGGGACAGGGAATGGAATATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR TCA 72 bp | TTTCTTAGATATGCAATTGTGTTCTGTGTTGAACTGTaGGCCAGGCGGTGGTGGCCCACGCCTTTAAACCCA | + |
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Preference number: 3 (lower is better) Translates to: FLRYAIVFCVEL*ARRWWPTPLNP Trigger: TGGGTTTAAAGGCGTGGGCCACCACCGCCTGGCTCACAGTTCAACACAGAACACAATTGCATATCTAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR TCA 72 bp | CCCAGCTTATTCTGCTGGTTCAGCTCCACATTCGGCTaGGTAAACAGAACCTCCACTATGTCTTTATGGCCA | + |
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Preference number: 3 (lower is better) Translates to: PSLFCWFSSTFG*VNRTSTMSLWP Trigger: TGGCCATAAAGACATAGTGGAGGTTCTGTTTACTCAGCCGAATGTGGAGCTGAACCAGCAGAATAAGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| 3UTR-3UTR CAA 90 bp | GTCAGCTGCTTCTGTCCATTGGTTGGGTTCAAACATCTGCATCTGACTCTTTCACAATTGTGTTCTGTGTaGAACTGTGAGCCAGGCGGT | + |
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Preference number: 3 (lower is better) Translates to: VSCFCPLVGFKHLHLTLSQLCSV*NCEPGG Trigger: ACCGCCTGGCTCACAGTTCAACACAGAACACAATTG...TGAAAGAGTCAGATGCAGATGTTTGAACCCAACCAATGGACAGAAGCAGCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR TCA 72 bp | GCTTCTGTCCATTGGTTGGGTTCAAACATCTGCATCTaGCTCTTTCAGCTACTTGTTGGGTCTATAAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: ASVHWLGSNICI*LFQLLVGSIRG Trigger: CCCCCTTATAGACCCAACAAGTAGCTGAAAGAGTCAGATGCAGATGTTTGAACCCAACCAATGGACAGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR TCA 72 bp | AGCTGGTGTATGCTGTCTGTTTGGTGGTCTAGTGTTTaGAAGATCTCGGGGTCCAGATTAAGACTGTTGGTC | + |
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Preference number: 3 (lower is better) Translates to: SWCMLSVWWSSV*KISGSRLRLLV Trigger: GACCAACAGTCTTAATCTGGACCCCGAGATCTTTCAAACACTAGACCACCAAACAGACAGCATACACCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR TCA 72 bp | TTAATGAAGTATCACACCAAGGCTTCCTGTATAGCCTaGCTCAGCAAAGGAATCCAAACCCTTGTGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: LMKYHTKASCIA*LSKGIQTLVRQ Trigger: CTGCCTCACAAGGGTTTGGATTCCTTTGCTGAGTCAGGCTATACAGGAAGCCTTGGTGTGATACTTCATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR GCA 72 bp | CTTCTTTCAGCCTTCCCTAATTCAACAAGGGTCAGCTaGTTCTGTCCATTGGTTGGGTTCAAACATCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: LLSAFPNSTRVS*FCPLVGFKHLH Trigger: ATGCAGATGTTTGAACCCAACCAATGGACAGAAGCAGCTGACCCTTGTTGAATTAGGGAAGGCTGAAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR TCA 72 bp | TCCAGTCTCTTGAGGGTTAGATGCATCATCTCTGAATaGACACAGACCTTGAAGTCCTCTACTGTATGTGTG | + |
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Preference number: 3 (lower is better) Translates to: SSLLRVRCIISE*TQTLKSSTVCV Trigger: CACACATACAGTAGAGGACTTCAAGGTCTGTGTTCATTCAGAGATGATGCATCTAACCCTCAAGAGACTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR GCA 72 bp | TCTGAGAAAACATGTTATCTGAGAGAGTCAAGTTCATaGTTCCTAACAACGTCGCCCTGGAAATTACGGCAG | + |
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Preference number: 3 (lower is better) Translates to: SEKTCYLRESSS*FLTTSPWKLRQ Trigger: CTGCCGTAATTTCCAGGGCGACGTTGTTAGGAAGCATGAACTTGACTCTCTCAGATAACATGTTTTCTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR GCA 72 bp | TGTATGTGTGTTAGGGGCCTCATATCAGCTGGTGTATaGTGTCTGTTTGGTGGTCTAGTGTTTGAAAGATCT | + |
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Preference number: 3 (lower is better) Translates to: CMCVRGLISAGV*CLFGGLVFERS Trigger: AGATCTTTCAAACACTAGACCACCAAACAGACAGCATACACCAGCTGATATGAGGCCCCTAACACACATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| 3UTR CCA 72 bp | AGAGAGTCAAGTTCATGCTTCCTAACAACGTCGCCCTaGAAATTACGGCAGCTTTCACAAAGAAACAGTCAT | + |
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Preference number: 3 (lower is better) Translates to: RESSSCFLTTSP*KLRQLSQRNSH Trigger: ATGACTGTTTCTTTGTGAAAGCTGCCGTAATTTCCAGGGCGACGTTGTTAGGAAGCATGAACTTGACTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS-3UTR GCA 90 bp | TCCATATTCCATTCCCTGTCCCTCCCCATCCACCCATCGACTGCTCCCCATACCTCTCCCAGCTTATTCTaGTGGTTCAGCTCCACATTC | + |
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Preference number: 4 (lower is better) Translates to: SIFHSLSLPIHPSTAPHTSPSLF*WFSSTF Trigger: GAATGTGGAGCTGAACCAGCAGAATAAGCTGGGAGA...GGTATGGGGAGCAGTCGATGGGTGGATGGGGAGGGACAGGGAATGGAATATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS-3UTR CCA 90 bp | TATGTCTTTATGGCCACCGTGGCAGGCCCAGTACAGGGCTGTGCTTCCAGCTTTGACTTTAACTTGCCCTaGTTTGACCGGTTTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: YVFMATVAGPVQGCASSFDFNLP*FDRFGR Trigger: CCTCCCAAACCGGTCAAACCAGGGCAAGTTAAAGTC...AAAGCTGGAAGCACAGCCCTGTACTGGGCCTGCCACGGTGGCCATAAAGACATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| CDS-3UTR CCA 90 bp | GATGAAATACCCGACAGTAAGGAGTGGGAACTTATAGAGCCCACCTCCAGCAGAATGCACAGGCAGCGTTaGTGGCCATGTCCAAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: DEIPDSKEWELIEPTSSRMHRQR*WPCPRP Trigger: TGGCCTTGGACATGGCCACCAACGCTGCCTGTGCAT...TCTGCTGGAGGTGGGCTCTATAAGTTCCCACTCCTTACTGTCGGGTATTTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS-3UTR GCA 90 bp | GGTGGAGGCAGGAGGATCACAAGTGGGAGCATAATGTCTTTCAAAAGTCCAAAGCCCAGTACAGGGCTGTaGTTCCAGCTTTGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GGGRRITSGSIMSFKSPKPSTGL*FQLCPG Trigger: GCCTGGACAAAGCTGGAAGCACAGCCCTGTACTGGG...CTTTGGACTTTTGAAAGACATTATGCTCCCACTTGTGATCCTCCTGCCTCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR GCA 90 bp | TATGTCTTTATGGCCACCGTGGCAGGCCCAGTACAGGGCTGTGCTTCCAGCTTTCTGAAGACTTTAACTTaGCCTGGTTTGACCGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: YVFMATVAGPVQGCASSFLKTLT*PGLTGL Trigger: CAAACCGGTCAAACCAGGGCAAGTTAAAGTCTTCAG...AAAGCTGGAAGCACAGCCCTGTACTGGGCCTGCCACGGTGGCCATAAAGACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| CDS-3UTR GCA 90 bp | CCTAATTCAACAAGGGTCAGCTGCTTCTGTCCATTGGTTGGGTTCAAACATCTGCCCAGTACAGGGCTGTaGTTCCAGCTTTGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PNSTRVSCFCPLVGFKHLPSTGL*FQLCPG Trigger: GCCTGGACAAAGCTGGAAGCACAGCCCTGTACTGGG...CAGATGTTTGAACCCAACCAATGGACAGAAGCAGCTGACCCTTGTTGAATTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS-3UTR CCA 90 bp | GTATCACACCAAGGCTTCCTGTATAGCCTGACTCAGCAAAGGAATCCAAACCCTTCCACTATGTCTTTATaGCCACCGTGGCAGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VSHQGFLYSLTQQRNPNPSTMSL*PPWQAQ Trigger: CTGGGCCTGCCACGGTGGCCATAAAGACATAGTGGA...AGGGTTTGGATTCCTTTGCTGAGTCAGGCTATACAGGAAGCCTTGGTGTGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS-3UTR CCA 90 bp | GGTGGAGGCAGGAGGATCACAAGTGGGAGCATAATGTCTTTCAAAAGTCCAAAGTCCACTATGTCTTTATaGCCACCGTGGCAGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GGGRRITSGSIMSFKSPKSTMSL*PPWQAQ Trigger: CTGGGCCTGCCACGGTGGCCATAAAGACATAGTGGA...CTTTGGACTTTTGAAAGACATTATGCTCCCACTTGTGATCCTCCTGCCTCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR GCA 90 bp | CCTAATTCAACAAGGGTCAGCTGCTTCTGTCCATTGGTTGGGTTCAAACATCTGGCCCCATCTGTTCCCTaGTGCTTCTTCTTCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: PNSTRVSCFCPLVGFKHLAPSVP*CFFFRS Trigger: GCTCCTGAAGAAGAAGCAGCAGGGAACAGATGGGGC...CAGATGTTTGAACCCAACCAATGGACAGAAGCAGCTGACCCTTGTTGAATTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS-3UTR CCA 90 bp | CAACATTGTAGAGGTGGAGGCAGGAGGATCACAAGTGGGAGCATAATGTCTTTCCCCAGCTTATTCTGCTaGTTCAGCTCCACATTCGGC | + |
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Preference number: 4 (lower is better) Translates to: QHCRGGGRRITSGSIMSFPSLFC*FSSTFG Trigger: GCCGAATGTGGAGCTGAACCAGCAGAATAAGCTGGG...GAAAGACATTATGCTCCCACTTGTGATCCTCCTGCCTCCACCTCTACAATGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR GCA 90 bp | GTCAGCTGCTTCTGTCCATTGGTTGGGTTCAAACATCTGCATCTGACTCTTTCAGGATCAGTCCTGTTCTaGCCTTGCATGTCCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: VSCFCPLVGFKHLHLTLSGSVLF*PCMSLS Trigger: GGAAAGGGACATGCAAGGGCAGAACAGGACTGATCC...TGAAAGAGTCAGATGCAGATGTTTGAACCCAACCAATGGACAGAAGCAGCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGGAGGATCACAAGTGGGAGCATAATGTCTTTCAAAAGTCCAAAGTCTGGATCAGTCCTGTTCTaGCCTTGCATGTCCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: GGRRITSGSIMSFKSPKSGSVLF*PCMSLS Trigger: GGAAAGGGACATGCAAGGGCAGAACAGGACTGATCC...AGACTTTGGACTTTTGAAAGACATTATGCTCCCACTTGTGATCCTCCTGCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR CCA 90 bp | AGAGGTGGAGGCAGGAGGATCACAAGTGGGAGCATAATGTCTTTCAAAAGTCCAGACTTTAACTTGCCCTaGTTTGACCGGTTTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RGGGRRITSGSIMSFKSPDFNLP*FDRFGR Trigger: CCTCCCAAACCGGTCAAACCAGGGCAAGTTAAAGTC...TGGACTTTTGAAAGACATTATGCTCCCACTTGTGATCCTCCTGCCTCCACCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR CCA 90 bp | GGCAAACAACCCAGGCTCCGGAATGGCAAAAGCAAAAGAAGTTTAGGCAACAATCCCAGCTTATTCTGCTaGTTCAGCTCCACATTCGGC | + |
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Preference number: 4 (lower is better) Translates to: GKQPRLRNGKSKRSLGNNPSLFC*FSSTFG Trigger: GCCGAATGTGGAGCTGAACCAGCAGAATAAGCTGGG...ATTGTTGCCTAAACTTCTTTTGCTTTTGCCATTCCGGAGCCTGGGTTGTTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS-3UTR CCA 90 bp | TATGTCTTTATGGCCACCGTGGCAGGCCCAGTACAGGGCTGTGCTTCCAGCTTTGCTCTTGACCAGTTCTaGGTTCAAATGTATATAGAG | + |
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Preference number: 4 (lower is better) Translates to: YVFMATVAGPVQGCASSFALDQF*VQMYIE Trigger: CTCTATATACATTTGAACCCAGAACTGGTCAAGAGC...AAAGCTGGAAGCACAGCCCTGTACTGGGCCTGCCACGGTGGCCATAAAGACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| CDS-3UTR GCA 90 bp | GGTGGAGGCAGGAGGATCACAAGTGGGAGCATAATGTCTTTCAAAAGTCCAAAGTCTCCCAGCTTATTCTaGTGGTTCAGCTCCACATTC | + |
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Preference number: 4 (lower is better) Translates to: GGGRRITSGSIMSFKSPKSPSLF*WFSSTF Trigger: GAATGTGGAGCTGAACCAGCAGAATAAGCTGGGAGA...CTTTGGACTTTTGAAAGACATTATGCTCCCACTTGTGATCCTCCTGCCTCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR CCA 90 bp | GGCAAACAACCCAGGCTCCGGAATGGCAAAAGCAAAAGAAGTTTAGGCAACAATGACTTTAACTTGCCCTaGTTTGACCGGTTTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GKQPRLRNGKSKRSLGNNDFNLP*FDRFGR Trigger: CCTCCCAAACCGGTCAAACCAGGGCAAGTTAAAGTC...ATTGTTGCCTAAACTTCTTTTGCTTTTGCCATTCCGGAGCCTGGGTTGTTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025631.7 ENSMUST00000236728.2 |
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| CDS-3UTR CCA 90 bp | ACAAGTGGGAGCATAATGTCTTTCAAAAGTCCAAAGTCTGAAGATCCTGAGTTCATGCACAGGCAGCGTTaGTGGCCATGTCCAAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TSGSIMSFKSPKSEDPEFMHRQR*WPCPRP Trigger: TGGCCTTGGACATGGCCACCAACGCTGCCTGTGCAT...GAACTCAGGATCTTCAGACTTTGGACTTTTGAAAGACATTATGCTCCCACTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR GCA 90 bp | CATTGTAGAGGTGGAGGCAGGAGGATCACAAGTGGGAGCATAATGTCTTTCAAAATTCCTGTTCCCTGCTaGTTCTTCTTCAGGAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: HCRGGGRRITSGSIMSFKIPVPC*FFFRSD Trigger: ATCGCTCCTGAAGAAGAAGCAGCAGGGAACAGGAAT...TTTGAAAGACATTATGCTCCCACTTGTGATCCTCCTGCCTCCACCTCTACAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR GCA 90 bp | GGCAAACAACCCAGGCTCCGGAATGGCAAAAGCAAAAGAAGTTTAGGCAACAATCTGAAGACTTTAACTTaGCCTGGTTTGACCGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: GKQPRLRNGKSKRSLGNNLKTLT*PGLTGL Trigger: CAAACCGGTCAAACCAGGGCAAGTTAAAGTCTTCAG...ATTGTTGCCTAAACTTCTTTTGCTTTTGCCATTCCGGAGCCTGGGTTGTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025631.7 ENSMUST00000236728.2 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGGAGGATCACAAGTGGGAGCATAATGTCTTTCAAAAGTCCAAAGTCTCTGAAGACTTTAACTTaGCCTGGTTTGACCGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: GGRRITSGSIMSFKSPKSLKTLT*PGLTGL Trigger: CAAACCGGTCAAACCAGGGCAAGTTAAAGTCTTCAG...AGACTTTGGACTTTTGAAAGACATTATGCTCCCACTTGTGATCCTCCTGCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR GCA 90 bp | ACAAGTGGGAGCATAATGTCTTTCAAAAGTCCAAAGTCTGAAGATCCTGAGTTCCAGATTCCTGTTCCCTaGTGCTTCTTCTTCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TSGSIMSFKSPKSEDPEFQIPVP*CFFFRS Trigger: GCTCCTGAAGAAGAAGCAGCAGGGAACAGGAATCTG...GAACTCAGGATCTTCAGACTTTGGACTTTTGAAAGACATTATGCTCCCACTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| 3UTR CAA 72 bp | TTCCCTAATTCAACAAGGGTCAGCTGCTTCTGTCCATaGGTTGGGTTCAAACATCTGCATCTGACTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: FPNSTRVSCFCP*VGFKHLHLTLS Trigger: TGAAAGAGTCAGATGCAGATGTTTGAACCCAACCAATGGACAGAAGCAGCTGACCCTTGTTGAATTAGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS-3UTR CCA 90 bp | GGTGGAGGCAGGAGGATCACAAGTGGGAGCATAATGTCTTTCAAAAGTCCAAAGATTCATCTGGAGTTCTaGGTTCAAATGTATATAGAG | + |
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Preference number: 4 (lower is better) Translates to: GGGRRITSGSIMSFKSPKIHLEF*VQMYIE Trigger: CTCTATATACATTTGAACCCAGAACTCCAGATGAAT...CTTTGGACTTTTGAAAGACATTATGCTCCCACTTGTGATCCTCCTGCCTCCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR CCA 90 bp | GGCAAACAACCCAGGCTCCGGAATGGCAAAAGCAAAAGAAGTTTAGGCAACAATATTCATCTGGAGTTCTaGGTTCAAATGTATATAGAG | + |
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Preference number: 4 (lower is better) Translates to: GKQPRLRNGKSKRSLGNNIHLEF*VQMYIE Trigger: CTCTATATACATTTGAACCCAGAACTCCAGATGAAT...ATTGTTGCCTAAACTTCTTTTGCTTTTGCCATTCCGGAGCCTGGGTTGTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS-3UTR CAA 90 bp | TCCATATTCCATTCCCTGTCCCTCCCCATCCACCCATCGACTGCTCCCCATACCGCTGTGCTTCCAGCTTaGTCCAGGCCGTTCACACCC | + |
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Preference number: 5 (lower is better) Translates to: SIFHSLSLPIHPSTAPHTAVLPA*SRPFTP Trigger: GGGTGTGAACGGCCTGGACAAAGCTGGAAGCACAGC...GGTATGGGGAGCAGTCGATGGGTGGATGGGGAGGGACAGGGAATGGAATATGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS-3UTR CAA 90 bp | TATGTCTTTATGGCCACCGTGGCAGGCCCAGTACAGGGCTGTGCTTCCAGCTTTTTAACTTGCCCTGGTTaGACCGGTTTGGGAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: YVFMATVAGPVQGCASSFLTCPG*TGLGGG Trigger: GCCACCTCCCAAACCGGTCAAACCAGGGCAAGTTAA...AAAGCTGGAAGCACAGCCCTGTACTGGGCCTGCCACGGTGGCCATAAAGACATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236728.2 |
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| CDS GCA 90 bp | AGTAATAGGACTGGGAGAAGTGGATGGCAGATTCCTGTTCCCTGCTaGTTCTTCTTCAGGAGCGATGCACAGGCAGCGTTGGTGGCCATG | + |
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Preference number: 5 (lower is better) Translates to: SNRTGRSGWQIPVPC*FFFRSDAQAALVAM Trigger: CATGGCCACCAACGCTGCCTGTGCATCGCTCCTGAAGAAGAAGCAGCAGGGAACAGGAATCTGCCATCCACTTCTCCCAGTCCTATTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS GCA 90 bp | GAAAGTAATAGGACTGGGAGAAGTGGATGGCAGATTCCTGTTCCCTaGTGCTTCTTCTTCAGGAGCGATGCACAGGCAGCGTTGGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: ESNRTGRSGWQIPVP*CFFFRSDAQAALVA Trigger: GGCCACCAACGCTGCCTGTGCATCGCTCCTGAAGAAGAAGCAGCAGGGAACAGGAATCTGCCATCCACTTCTCCCAGTCCTATTACTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR CAA 90 bp | TGGAGGCAGGAGGATCACAAGTGGGAGCATAATGTCTTTCAAAAGTCCAAAGTCGATGCACAGGCAGCGTaGGTGGCCATGTCCAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: WRQEDHKWEHNVFQKSKVDAQAA*VAMSKA Trigger: GGCCTTGGACATGGCCACCAACGCTGCCTGTGCATC...GACTTTGGACTTTTGAAAGACATTATGCTCCCACTTGTGATCCTCCTGCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR CAA 90 bp | TGGAGGCAGGAGGATCACAAGTGGGAGCATAATGTCTTTCAAAAGTCCAAAGTCGCTGTGCTTCCAGCTTaGTCCAGGCCGTTCACACCC | + |
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Preference number: 5 (lower is better) Translates to: WRQEDHKWEHNVFQKSKVAVLPA*SRPFTP Trigger: GGGTGTGAACGGCCTGGACAAAGCTGGAAGCACAGC...GACTTTGGACTTTTGAAAGACATTATGCTCCCACTTGTGATCCTCCTGCCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR CAA 90 bp | GTATCACACCAAGGCTTCCTGTATAGCCTGACTCAGCAAAGGAATCCAAACCCTTTAACTTGCCCTGGTTaGACCGGTTTGGGAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: VSHQGFLYSLTQQRNPNPLTCPG*TGLGGG Trigger: GCCACCTCCCAAACCGGTCAAACCAGGGCAAGTTAA...AGGGTTTGGATTCCTTTGCTGAGTCAGGCTATACAGGAAGCCTTGGTGTGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS-3UTR CAA 90 bp | CAACATTGTAGAGGTGGAGGCAGGAGGATCACAAGTGGGAGCATAATGTCTTTCTTAACTTGCCCTGGTTaGACCGGTTTGGGAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: QHCRGGGRRITSGSIMSFLTCPG*TGLGGG Trigger: GCCACCTCCCAAACCGGTCAAACCAGGGCAAGTTAA...GAAAGACATTATGCTCCCACTTGTGATCCTCCTGCCTCCACCTCTACAATGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR CAA 90 bp | TTGGTTGGGTTCAAACATCTGCATCTGACTCTTTCAGCTACTTGTTGGGTCTATGATGCACAGGCAGCGTaGGTGGCCATGTCCAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: LVGFKHLHLTLSATCWVYDAQAA*VAMSKA Trigger: GGCCTTGGACATGGCCACCAACGCTGCCTGTGCATC...ATAGACCCAACAAGTAGCTGAAAGAGTCAGATGCAGATGTTTGAACCCAACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS-3UTR CAA 90 bp | GTATCACACCAAGGCTTCCTGTATAGCCTGACTCAGCAAAGGAATCCAAACCCTCTCAACCAGCTCAGGTaGCCTCTTTTTGCAGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: VSHQGFLYSLTQQRNPNPLNQLR*PLFAAS Trigger: TGAAGCTGCAAAAAGAGGCAACCTGAGCTGGTTGAG...AGGGTTTGGATTCCTTTGCTGAGTCAGGCTATACAGGAAGCCTTGGTGTGATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS-3UTR CAA 90 bp | CCTAATTCAACAAGGGTCAGCTGCTTCTGTCCATTGGTTGGGTTCAAACATCTGCTGTCCTCGCACCTTTaGCCAGTAGCAACTGGACAA | + |
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Preference number: 5 (lower is better) Translates to: PNSTRVSCFCPLVGFKHLLSSHL*PVATGQ Trigger: TTGTCCAGTTGCTACTGGCAAAAGGTGCGAGGACAG...CAGATGTTTGAACCCAACCAATGGACAGAAGCAGCTGACCCTTGTTGAATTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS-3UTR CAA 90 bp | TGGAGGCAGGAGGATCACAAGTGGGAGCATAATGTCTTTCAAAAGTCCAAAGTCCTGTCCTCGCACCTTTaGCCAGTAGCAACTGGACAA | + |
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Preference number: 5 (lower is better) Translates to: WRQEDHKWEHNVFQKSKVLSSHL*PVATGQ Trigger: TTGTCCAGTTGCTACTGGCAAAAGGTGCGAGGACAG...GACTTTGGACTTTTGAAAGACATTATGCTCCCACTTGTGATCCTCCTGCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR CAA 90 bp | CATTGTAGAGGTGGAGGCAGGAGGATCACAAGTGGGAGCATAATGTCTTTCAAACTCAACCAGCTCAGGTaGCCTCTTTTTGCAGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: HCRGGGRRITSGSIMSFKLNQLR*PLFAAS Trigger: TGAAGCTGCAAAAAGAGGCAACCTGAGCTGGTTGAG...TTTGAAAGACATTATGCTCCCACTTGTGATCCTCCTGCCTCCACCTCTACAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR CAA 90 bp | CATTGTAGAGGTGGAGGCAGGAGGATCACAAGTGGGAGCATAATGTCTTTCAAATCTGAAGACTTTAACTaGCCCTGGTTTGACCGGTTT | + |
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Preference number: 5 (lower is better) Translates to: HCRGGGRRITSGSIMSFKSEDFN*PWFDRF Trigger: AAACCGGTCAAACCAGGGCAAGTTAAAGTCTTCAGA...TTTGAAAGACATTATGCTCCCACTTGTGATCCTCCTGCCTCCACCTCTACAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS-3UTR CAA 90 bp | TTGGTTGGGTTCAAACATCTGCATCTGACTCTTTCAGCTACTTGTTGGGTCTATTCTGAAGACTTTAACTaGCCCTGGTTTGACCGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LVGFKHLHLTLSATCWVYSEDFN*PWFDRF Trigger: AAACCGGTCAAACCAGGGCAAGTTAAAGTCTTCAGA...ATAGACCCAACAAGTAGCTGAAAGAGTCAGATGCAGATGTTTGAACCCAACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025631.7 |
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| CDS GCA 72 bp | AGGACTGGGAGAAGTGGATGGCAGATTCCTGTTCCCTaGTGCTTCTTCTTCAGGAGCGATGCACAGGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RTGRSGWQIPVP*CFFFRSDAQAA Trigger: CGCTGCCTGTGCATCGCTCCTGAAGAAGAAGCAGCAGGGAACAGGAATCTGCCATCCACTTCTCCCAGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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| CDS GCA 72 bp | ACTGGGAGAAGTGGATGGCAGATTCCTGTTCCCTGCTaGTTCTTCTTCAGGAGCGATGCACAGGCAGCGTTG | + |
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Preference number: 6 (lower is better) Translates to: TGRSGWQIPVPC*FFFRSDAQAAL Trigger: CAACGCTGCCTGTGCATCGCTCCTGAAGAAGAAGCAGCAGGGAACAGGAATCTGCCATCCACTTCTCCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236615.2 |
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