Pregenerated sensors for OSR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022330Ensembl transcript IDs: ENSMUST00000022952.6, ENSMUST00000228152.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTTTCTAGAGAGTTCTCAGTCCTCAGAAGAACAGTTAACTCCCTaGAGCTGCAGGTGCGGCTGCAGGCAGGGAAGAGCCGGGGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: GFLESSQSSEEQLTP*SCRCGCRQGRAGVS Trigger: ACTGACCCCGGCTCTTCCCTGCCTGCAGCCGCACCTGCAGCTCCAGGGAGTTAACTGTTCTTCTGAGGACTGAGAACTCTCTAGAAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| 3UTR TCA 90 bp | AACGACCGGACGAAGACCCACAATATTATGTACAGAGCTCTAAAATaGGCCGTGAATATCTACAAGGATCTAGCACATGCTGGTTTGGAA | + |
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Preference number: 1 (lower is better) Translates to: NDRTKTHNIMYRALK*AVNIYKDLAHAGLE Trigger: TTCCAAACCAGCATGTGCTAGATCCTTGTAGATATTCACGGCTCATTTTAGAGCTCTGTACATAATATTGTGGGTCTTCGTCCGGTCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTTTGGAAGGGGGTAGTGTGTGGCTTTCTAGAGAGTTCTCAGTCCTCAGAAGTAGGGATGGGCCCCTaGGGTGGGAGGCGAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LVWKGVVCGFLESSQSSEVGMGP*GGRRGE Trigger: CTCTCCTCGCCTCCCACCCCAGGGGCCCATCCCTAC...TTCTGAGGACTGAGAACTCTCTAGAAAGCCACACACTACCCCCTTCCAAACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACAGAACGACCGGACGAAGACCCACAATATTATGTACAGAGCTCTAAAATGGCGAGGAGAGGTGTCTaGGGGGAAGGGAGCCGGGGC | + |
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Preference number: 2 (lower is better) Translates to: QTERPDEDPQYYVQSSKMARRGV*GEGSRG Trigger: GCCCCGGCTCCCTTCCCCCCAGACACCTCTCCTCGC...CATTTTAGAGCTCTGTACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| 3UTR-3UTR CCA 90 bp | CCGGACGAAGACCCACAATATTATGTACAGAGCTCTAAAATGAGCCGTGAATATGCGAGGAGAGGTGTCTaGGGGGAAGGGAGCCGGGGC | + |
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Preference number: 2 (lower is better) Translates to: PDEDPQYYVQSSKMSREYARRGV*GEGSRG Trigger: GCCCCGGCTCCCTTCCCCCCAGACACCTCTCCTCGC...ATATTCACGGCTCATTTTAGAGCTCTGTACATAATATTGTGGGTCTTCGTCCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGATACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTATGTACAGTAGGGATGGGCCCCTaGGGTGGGAGGCGAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: QDTKTDRTTGRRPTILCTVGMGP*GGRRGE Trigger: CTCTCCTCGCCTCCCACCCCAGGGGCCCATCCCTAC...TGTACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAATATCTACAAGGATCTAGCACATGCTGGTTTGGAAGGGGGTAGTGTGTGGGCACAGGACAGATCCTaGGCTTCGCTAGAAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: VNIYKDLAHAGLEGGSVWAQDRS*ASLEVL Trigger: CAGAACTTCTAGCGAAGCCCAGGATCTGTCCTGTGC...CCACACACTACCCCCTTCCAAACCAGCATGTGCTAGATCCTTGTAGATATTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022952.6 |
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| 3UTR-3UTR CCA 90 bp | GTACAGAGCTCTAAAATGAGCCGTGAATATCTACAAGGATCTAGCACATGCTGGGAACAGTTAACTCCCTaGAGCTGCAGGTGCGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: VQSSKMSREYLQGSSTCWEQLTP*SCRCGC Trigger: GCAGCCGCACCTGCAGCTCCAGGGAGTTAACTGTTC...CCAGCATGTGCTAGATCCTTGTAGATATTCACGGCTCATTTTAGAGCTCTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTCGTTTTCCATGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGAACGGAACAGTTAACTCCCTaGAGCTGCAGGTGCGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: VSFSMSRCIQQDTKTDRTEQLTP*SCRCGC Trigger: GCAGCCGCACCTGCAGCTCCAGGGAGTTAACTGTTC...CGTTCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACATGGAAAACGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR TCA 90 bp | CCATGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGAACGACCGGACGAATTCTGCCGCGGGGTGTaGGTCAGGCTGTGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: PCLGASNKIQKQTERPDEFCRGV*VRLCRR Trigger: GCGGCGGCACAGCCTGACTCACACCCCGCGGCAGAA...TTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228152.2 |
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| CDS-3UTR CCA 90 bp | GGTTTGGAAGGGGGTAGTGTGTGGCTTTCTAGAGAGTTCTCAGTCCTCAGAAGAACGGGTGCAGTGGGATaGGAGCTGGCAGGGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GLEGGSVWLSREFSVLRRTGAVG*ELAGPC Trigger: GCAAGGCCCTGCCAGCTCCCATCCCACTGCACCCGT...TCTTCTGAGGACTGAGAACTCTCTAGAAAGCCACACACTACCCCCTTCCAAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR GCA 90 bp | CAGACAGAACGACCGGACGAAGACCCACAATATTATGTACAGAGCTCTAAAATGGCGTCCACGAGGCCCTaGGCAGCCGCCATCTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: QTERPDEDPQYYVQSSKMASTRP*AAAISV Trigger: CACGGAGATGGCGGCTGCGCAGGGCCTCGTGGACGC...CATTTTAGAGCTCTGTACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR GCA 90 bp | GTGAATATCTACAAGGATCTAGCACATGCTGGTTTGGAAGGGGGTAGTGTGTGGGAGCGGGTGATCTCGTaGACACTGGGGTACCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VNIYKDLAHAGLEGGSVWERVIS*TLGYPS Trigger: GCTGGGGTACCCCAGTGTGCACGAGATCACCCGCTC...CCACACACTACCCCCTTCCAAACCAGCATGTGCTAGATCCTTGTAGATATTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR GCA 90 bp | TGTGGCTTTCTAGAGAGTTCTCAGTCCTCAGAAGAACAGTTAACTCCCTGGAGCTGGGCAATGGCCCCCTaGTTGGGGTGGAACAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: CGFLESSQSSEEQLTPWSWAMAP*LGWNRW Trigger: CCACCTGTTCCACCCCAAGCAGGGGGCCATTGCCCA...GCTCCAGGGAGTTAACTGTTCTTCTGAGGACTGAGAACTCTCTAGAAAGCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR CCA 90 bp | TGTGGCTTTCTAGAGAGTTCTCAGTCCTCAGAAGAACAGTTAACTCCCTGGAGCCAGTGGGATGGGAGCTaGCAGGGCCTTGCTCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: CGFLESSQSSEEQLTPWSQWDGS*QGLAPH Trigger: ATGGGGAGCAAGGCCCTGCCAGCTCCCATCCCACTG...GCTCCAGGGAGTTAACTGTTCTTCTGAGGACTGAGAACTCTCTAGAAAGCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR CCA 90 bp | TGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGAACGACCGGACGAAGACACGGGTGCAGTGGGATaGGAGCTGGCAGGGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: CLGASNKIQKQTERPDEDTGAVG*ELAGPC Trigger: GCAAGGCCCTGCCAGCTCCCATCCCACTGCACCCGT...GTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR GCA 90 bp | ACAAGATACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTATGTACGCGTCCACGAGGCCCTaGGCAGCCGCCATCTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: TRYKNRQNDRTKTHNIMYASTRP*AAAISV Trigger: CACGGAGATGGCGGCTGCGCAGGGCCTCGTGGACGC...GTACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR CCA 90 bp | CCATGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGAACGACCGGACGAAGAAGGACGTGGGCAATaGCCCCCTGCTTGGGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: PCLGASNKIQKQTERPDEEGRGQ*PPAWGG Trigger: TCCACCCCAAGCAGGGGGCCATTGCCCACGTCCTTC...TTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR TCA 90 bp | ACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTATGTACAGAGCTCCCGGGTTCAGTTTACTaGGGCCCGAGATGGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TKTDRTTGRRPTILCTELPGSVY*GPRWGS Trigger: GGAGCCCCATCTCGGGCCTCAGTAAACTGAACCCGG...GAGCTCTGTACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR GCA 90 bp | GTACAGAGCTCTAAAATGAGCCGTGAATATCTACAAGGATCTAGCACATGCTGGGAGCGGGTGATCTCGTaGACACTGGGGTACCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VQSSKMSREYLQGSSTCWERVIS*TLGYPS Trigger: GCTGGGGTACCCCAGTGTGCACGAGATCACCCGCTC...CCAGCATGTGCTAGATCCTTGTAGATATTCACGGCTCATTTTAGAGCTCTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR CCA 90 bp | GTACAGAGCTCTAAAATGAGCCGTGAATATCTACAAGGATCTAGCACATGCTGGCAGTGGGATGGGAGCTaGCAGGGCCTTGCTCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: VQSSKMSREYLQGSSTCWQWDGS*QGLAPH Trigger: ATGGGGAGCAAGGCCCTGCCAGCTCCCATCCCACTG...CCAGCATGTGCTAGATCCTTGTAGATATTCACGGCTCATTTTAGAGCTCTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR CCA 90 bp | TTTCCATGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGAACGACCGGACCAATGGCCCCCTGCTTaGGGTGGAACAGGTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: FPCLGASNKIQKQTERPDQWPPA*GGTGGW Trigger: CCACCCACCTGTTCCACCCCAAGCAGGGGGCCATTG...GTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACATGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR CCA 90 bp | CGTTTTCCATGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGAACGACCGCAATGGCCCCCTGCTTaGGGTGGAACAGGTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RFPCLGASNKIQKQTERPQWPPA*GGTGGW Trigger: CCACCCACCTGTTCCACCCCAAGCAGGGGGCCATTG...CGGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACATGGAAAACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR CCA 90 bp | CCATGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGAACGACCGGACGAACGGCCACCGCCAAGTTaGCAAAGTCAAAACGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: PCLGASNKIQKQTERPDERPPPS*QSQNGA Trigger: GGCCCCGTTTTGACTTTGCCAACTTGGCGGTGGCCG...TTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR TCA 90 bp | CTAGGTGCATCCAACAAGATACAAAAACAGACAGAACGACCGGACGAAGACCCAGATCGCAGTTTCGCCTaGACACTTTGCCGCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: LGASNKIQKQTERPDEDPDRSFA*TLCRTA Trigger: AGCAGTGCGGCAAAGTGTTCAGGCGAAACTGCGATC...TGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR GCA 90 bp | TCGTTTTCCATGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGAACGACCTGGGCAATGGCCCCCTaGTTGGGGTGGAACAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SFSMSRCIQQDTKTDRTTWAMAP*LGWNRW Trigger: CCACCTGTTCCACCCCAAGCAGGGGGCCATTGCCCA...GGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACATGGAAAACGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR CCA 90 bp | CATCCAACAAGATACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTGGTGGAACAGGTGGGTaGCAAAGGGCAGCGAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: HPTRYKNRQNDRTKTHNIGGTGG*QRAARG Trigger: TCCCCTCGCTGCCCTTTGCCACCCACCTGTTCCACC...AATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR TCA 90 bp | CAACAAGATACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTATGTCCGGGTTCAGTTTACTaGGGCCCGAGATGGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QQDTKTDRTTGRRPTILCPGSVY*GPRWGS Trigger: GGAGCCCCATCTCGGGCCTCAGTAAACTGAACCCGG...ACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR GCA 90 bp | CTGGTTTGGAAGGGGGTAGTGTGTGGCTTTCTAGAGAGTTCTCAGTCCTCAGAACGGGAAGGTGTTCACTaGCTGCAGGAAGGAGTAATT | + |
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Preference number: 4 (lower is better) Translates to: LVWKGVVCGFLESSQSSEREGVH*LQEGVI Trigger: AATTACTCCTTCCTGCAGGCAGTGAACACCTTCCCG...TTCTGAGGACTGAGAACTCTCTAGAAAGCCACACACTACCCCCTTCCAAACCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR GCA 90 bp | TGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGAACGACCGGACGAAGACGTCCAGTGGTTCATGTaGATGGTCTGCACCGCACTG | + |
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Preference number: 4 (lower is better) Translates to: CLGASNKIQKQTERPDEDVQWFM*MVCTAL Trigger: CAGTGCGGTGCAGACCATGCACATGAACCACTGGAC...GTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR CCA 90 bp | CTAGCACATGCTGGTTTGGAAGGGGGTAGTGTGTGGCTTTCTAGAGAGTTCTCAACTCCTTTTTCGTTTTaGAGGGCAATCTCCCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: LAHAGLEGGSVWLSREFSTPFSF*RAISLG Trigger: CCCGAGGGAGATTGCCCTCCAAAACGAAAAAGGAGT...TGAGAACTCTCTAGAAAGCCACACACTACCCCCTTCCAAACCAGCATGTGCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR CCA 90 bp | TGCATCCAACAAGATACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATACCCCAGCGTCCAGTaGTTCATGTGCATGGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: CIQQDTKTDRTTGRRPTIYPSVQ*FMCMVC Trigger: GCAGACCATGCACATGAACCACTGGACGCTGGGGTA...TATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR CCA 90 bp | AACAAGATACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTATGTAAGGGCTGGAAGGACGTaGGCAATGGCCCCCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: NKIQKQTERPDEDPQYYVRAGRT*AMAPCL Trigger: CAAGCAGGGGGCCATTGCCCACGTCCTTCCAGCCCT...TACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR CCA 90 bp | CAACAAGATACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTATGTCGGCCACCGCCAAGTTaGCAAAGTCAAAACGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: QQDTKTDRTTGRRPTILCRPPPS*QSQNGA Trigger: GGCCCCGTTTTGACTTTGCCAACTTGGCGGTGGCCG...ACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| 3UTR CAA 72 bp | GCCGTGAATATCTACAAGGATCTAGCACATGCTGGTTaGGAAGGGGGTAGTGTGTGGCTTTCTAGAGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: AVNIYKDLAHAG*EGGSVWLSREF Trigger: GAACTCTCTAGAAAGCCACACACTACCCCCTTCCAAACCAGCATGTGCTAGATCCTTGTAGATATTCACGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR TCA 90 bp | CCGGACGAAGACCCACAATATTATGTACAGAGCTCTAAAATGAGCCGTGAATATGGAAGGAGTAATTGGTaGGCTGCAGTGACGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PDEDPQYYVQSSKMSREYGRSNW*AAVTGA Trigger: TGCACCCGTCACTGCAGCTCACCAATTACTCCTTCC...ATATTCACGGCTCATTTTAGAGCTCTGTACATAATATTGTGGGTCTTCGTCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR TCA 90 bp | GGTTTGGAAGGGGGTAGTGTGTGGCTTTCTAGAGAGTTCTCAGTCCTCAGAAGAGTGTGGGTCCTCTCGTaGATGAGCAAATTGTATGAT | + |
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Preference number: 4 (lower is better) Translates to: GLEGGSVWLSREFSVLRRVWVLS*MSKLYD Trigger: ATCATACAATTTGCTCATTCACGAGAGGACCCACAC...TCTTCTGAGGACTGAGAACTCTCTAGAAAGCCACACACTACCCCCTTCCAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR TCA 90 bp | CTAGCACATGCTGGTTTGGAAGGGGGTAGTGTGTGGCTTTCTAGAGAGTTCTCAGTGTGGGTCCTCTCGTaGATGAGCAAATTGTATGAT | + |
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Preference number: 4 (lower is better) Translates to: LAHAGLEGGSVWLSREFSVWVLS*MSKLYD Trigger: ATCATACAATTTGCTCATTCACGAGAGGACCCACAC...TGAGAACTCTCTAGAAAGCCACACACTACCCCCTTCCAAACCAGCATGTGCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR GCA 90 bp | CCGGACGAAGACCCACAATATTATGTACAGAGCTCTAAAATGAGCCGTGAATATGTCCAGTGGTTCATGTaGATGGTCTGCACCGCACTG | + |
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Preference number: 4 (lower is better) Translates to: PDEDPQYYVQSSKMSREYVQWFM*MVCTAL Trigger: CAGTGCGGTGCAGACCATGCACATGAACCACTGGAC...ATATTCACGGCTCATTTTAGAGCTCTGTACATAATATTGTGGGTCTTCGTCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR CCA 90 bp | GTCTTTAAAGATAAATTTGCGTTTCGTTTTCCATGTCTAGGTGCATCCAACAAGGGTGGAACAGGTGGGTaGCAAAGGGCAGCGAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VFKDKFAFRFPCLGASNKGGTGG*QRAARG Trigger: TCCCCTCGCTGCCCTTTGCCACCCACCTGTTCCACC...CTTGTTGGATGCACCTAGACATGGAAAACGAAACGCAAATTTATCTTTAAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR CCA 90 bp | GTCTTTAAAGATAAATTTGCGTTTCGTTTTCCATGTCTAGGTGCATCCAACAAGAGGGCTGGAAGGACGTaGGCAATGGCCCCCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: VFKDKFAFRFPCLGASNKRAGRT*AMAPCL Trigger: CAAGCAGGGGGCCATTGCCCACGTCCTTCCAGCCCT...CTTGTTGGATGCACCTAGACATGGAAAACGAAACGCAAATTTATCTTTAAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR TCA 90 bp | ACAAGATACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTATGTACGGAAGGAGTAATTGGTaGGCTGCAGTGACGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: TRYKNRQNDRTKTHNIMYGRSNW*AAVTGA Trigger: TGCACCCGTCACTGCAGCTCACCAATTACTCCTTCC...GTACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR TCA 90 bp | GCGTTTCGTTTTCCATGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGAAGATCGCAGTTTCGCCTaGACACTTTGCCGCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: AFRFPCLGASNKIQKQTEDRSFA*TLCRTA Trigger: AGCAGTGCGGCAAAGTGTTCAGGCGAAACTGCGATC...TTCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACATGGAAAACGAAACGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
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| CDS-3UTR GCA 90 bp | AATACAGTCTTTAAAGATAAATTTGCGTTTCGTTTTCCATGTCTAGGTGCATCCAGCTGCAGTGACGGGTaGAGTGGGATGGGAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTVFKDKFAFRFPCLGASSCSDG*SGMGAG Trigger: GCCAGCTCCCATCCCACTGCACCCGTCACTGCAGCT...GGATGCACCTAGACATGGAAAACGAAACGCAAATTTATCTTTAAAGACTGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR GCA 90 bp | ACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTATGTACAGAGCTCCGGGAAGGTGTTCACTaGCTGCAGGAAGGAGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: TKTDRTTGRRPTILCTELREGVH*LQEGVI Trigger: AATTACTCCTTCCTGCAGGCAGTGAACACCTTCCCG...GAGCTCTGTACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CCA 90 bp | AATACAGTCTTTAAAGATAAATTTGCGTTTCGTTTTCCATGTCTAGGTGCATCCGAAGGACGTGGGCAATaGCCCCCTGCTTGGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NTVFKDKFAFRFPCLGASEGRGQ*PPAWGG Trigger: TCCACCCCAAGCAGGGGGCCATTGCCCACGTCCTTC...GGATGCACCTAGACATGGAAAACGAAACGCAAATTTATCTTTAAAGACTGTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR TCA 90 bp | CTAGCACATGCTGGTTTGGAAGGGGGTAGTGTGTGGCTTTCTAGAGAGTTCTCAATATGTAAAGTTTTGTaGACTGCTAGGGTCCTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LAHAGLEGGSVWLSREFSICKVL*TARVLD Trigger: GTCTAGGACCCTAGCAGTTCACAAAACTTTACATAT...TGAGAACTCTCTAGAAAGCCACACACTACCCCCTTCCAAACCAGCATGTGCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CCA 90 bp | CATCCAACAAGATACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTACTCCTTTTTCGTTTTaGAGGGCAATCTCCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HPTRYKNRQNDRTKTHNITPFSF*RAISLG Trigger: CCCGAGGGAGATTGCCCTCCAAAACGAAAAAGGAGT...AATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGATACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTATGTACGATGTCACAGGTGTATaGCCTCTCGTCTGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRYKNRQNDRTKTHNIMYDVTGV*PLVCVG Trigger: ACCCACACAGACGAGAGGCCATACACCTGTGACATC...GTACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CCA 90 bp | GAACGACCGGACGAAGACCCACAATATTATGTACAGAGCTCTAAAATGAGCCGTAGGTTCTTCCACATGTaGGACATTTGTGTGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: ERPDEDPQYYVQSSKMSRRFFHM*DICVEI Trigger: AATCTCCACACAAATGTCCCACATGTGGAAGAACCT...ACGGCTCATTTTAGAGCTCTGTACATAATATTGTGGGTCTTCGTCCGGTCGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228152.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTTAAAGATAAATTTGCGTTTCGTTTTCCATGTCTAGGTGCATCCAACAAGGATGTCACAGGTGTATaGCCTCTCGTCTGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VFKDKFAFRFPCLGASNKDVTGV*PLVCVG Trigger: ACCCACACAGACGAGAGGCCATACACCTGTGACATC...CTTGTTGGATGCACCTAGACATGGAAAACGAAACGCAAATTTATCTTTAAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGATACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTATGTACATATGTAAAGTTTTGTaGACTGCTAGGGTCCTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TRYKNRQNDRTKTHNIMYICKVL*TARVLD Trigger: GTCTAGGACCCTAGCAGTTCACAAAACTTTACATAT...GTACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR TCA 90 bp | CATCCAACAAGATACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTTTCAGGTTACTTCTCTaGTTAAAGGTTCTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: HPTRYKNRQNDRTKTHNIFRLLL*LKVLPH Trigger: ATGTGGAAGAACCTTTAATCAGAGAAGTAACCTGAA...AATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228152.2 |
||
| CDS-3UTR TCA 90 bp | CAAGATACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTATGTACAAATGAGCAAATTGTATaGTTTGGTAAAGTGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QDTKTDRTTGRRPTILCTNEQIV*FGKVSA Trigger: GGCAGACACTTTACCAAATCATACAATTTGCTCATT...TGTACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS GCA 90 bp | GCAAAGGGCAGCGAGGGGAAGGGGAAGCGAGCGTCCACGAGGCCCTaGGCAGCCGCCATCTCCGTGATGGTGGAGCGGGTGATCTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AKGSEGKGKRASTRP*AAAISVMVERVISC Trigger: GCACGAGATCACCCGCTCCACCATCACGGAGATGGCGGCTGCGCAGGGCCTCGTGGACGCTCGCTTCCCCTTCCCCTCGCTGCCCTTTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS TCA 90 bp | GGTACCCCAGCGTCCAGTGGTTCATGTGCATGGTCTGCACCGCACTaGGACCGTAGAGGCCCTGAAGGTGGTCCACTGCGGCCGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTPASSGSCAWSAPH*DRRGPEGGPLRPGR Trigger: CCTTCCCGGCCGCAGTGGACCACCTTCAGGGCCTCTACGGTCTCAGTGCGGTGCAGACCATGCACATGAACCACTGGACGCTGGGGTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | CTAGCACATGCTGGTTTGGAAGGGGGTAGTGTGTGGCTTTCTAGAGAGTTCTCAGCAATGGCCCCCTGCTaGGGGTGGAACAGGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LAHAGLEGGSVWLSREFSAMAPC*GWNRWV Trigger: CACCCACCTGTTCCACCCCAAGCAGGGGGCCATTGC...TGAGAACTCTCTAGAAAGCCACACACTACCCCCTTCCAAACCAGCATGTGCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | AAAATGAGCCGTGAATATCTACAAGGATCTAGCACATGCTGGTTTGGAAGGGGGGCAATGGCCCCCTGCTaGGGGTGGAACAGGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KMSREYLQGSSTCWFGRGAMAPC*GWNRWV Trigger: CACCCACCTGTTCCACCCCAAGCAGGGGGCCATTGC...CCCCCTTCCAAACCAGCATGTGCTAGATCCTTGTAGATATTCACGGCTCATTTT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | GTGAATATCTACAAGGATCTAGCACATGCTGGTTTGGAAGGGGGTAGTGTGTGGAAACGGGGCCGGTCCTaGTGTAGGGCTGGAAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: VNIYKDLAHAGLEGGSVWKRGRS*CRAGRT Trigger: CGTCCTTCCAGCCCTACACAAGGACCGGCCCCGTTT...CCACACACTACCCCCTTCCAAACCAGCATGTGCTAGATCCTTGTAGATATTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | CCATGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGAACGACCGGACGAAAAACGGGGCCGGTCCTaGTGTAGGGCTGGAAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: PCLGASNKIQKQTERPDEKRGRS*CRAGRT Trigger: CGTCCTTCCAGCCCTACACAAGGACCGGCCCCGTTT...TTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | GAACGACCGGACGAAGACCCACAATATTATGTACAGAGCTCTAAAATGAGCCGTTTTCGCCTGAACACTTaGCCGCACTGCTCGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ERPDEDPQYYVQSSKMSRFRLNT*PHCSQL Trigger: CAGCTGCGAGCAGTGCGGCAAAGTGTTCAGGCGAAA...ACGGCTCATTTTAGAGCTCTGTACATAATATTGTGGGTCTTCGTCCGGTCGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | TGCGTTTCGTTTTCCATGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGAGCGGCCACCGCCAAGTaGGCAAAGTCAAAACGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CVSFSMSRCIQQDTKTDRAATAK*AKSKRG Trigger: GCCCCGTTTTGACTTTGCCAACTTGGCGGTGGCCGC...TCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACATGGAAAACGAAACGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | TCGTTTTCCATGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGAACGACCTTTCGCCTGAACACTTaGCCGCACTGCTCGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFSMSRCIQQDTKTDRTTFRLNT*PHCSQL Trigger: CAGCTGCGAGCAGTGCGGCAAAGTGTTCAGGCGAAA...GGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACATGGAAAACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | GCGTTTCGTTTTCCATGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGAATTTAGGAGGATCTTCTaGCGTGGCGGCCACCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AFRFPCLGASNKIQKQTEFRRIF*RGGHRQ Trigger: TTGGCGGTGGCCGCCACGCAAGAAGATCCTCCTAAA...TTCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACATGGAAAACGAAACGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTGTGGCTTTCTAGAGAGTTCTCAGTCCTCAGAAGAACAGTTAACTCCCTGAACTCCTTTTTCGTTTaGGAGGGCAATCTCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SVWLSREFSVLRRTVNSLNSFFV*EGNLPR Trigger: CCGAGGGAGATTGCCCTCCAAAACGAAAAAGGAGTT...CAGGGAGTTAACTGTTCTTCTGAGGACTGAGAACTCTCTAGAAAGCCACACACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCTAGAGAGTTCTCAGTCCTCAGAAGAACAGTTAACTCCCTGGAGCTGCAGCCACATGTGGGACATTaGTGTGGAGATTCCTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: LSREFSVLRRTVNSLELQPHVGH*CGDSCI Trigger: TATGCAGGAATCTCCACACAAATGTCCCACATGTGG...CTGCAGCTCCAGGGAGTTAACTGTTCTTCTGAGGACTGAGAACTCTCTAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | AACAAGATACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTATGTATTTAGGAGGATCTTCTaGCGTGGCGGCCACCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: NKIQKQTERPDEDPQYYVFRRIF*RGGHRQ Trigger: TTGGCGGTGGCCGCCACGCAAGAAGATCCTCCTAAA...TACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAAACAGACAGAACGACCGGACGAAGACCCACAATATTATGTACAGAGCTCAACTCCTTTTTCGTTTaGGAGGGCAATCTCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TKTDRTTGRRPTILCTELNSFFV*EGNLPR Trigger: CCGAGGGAGATTGCCCTCCAAAACGAAAAAGGAGTT...GAGCTCTGTACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGAACGACCGGACGAAGACAGCAAATTGTATGATTaGGTAAAGTGTCTGCCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CLGASNKIQKQTERPDEDSKLYD*VKCLPQ Trigger: TTGCGGCAGACACTTTACCAAATCATACAATTTGCT...GTCTTCGTCCGGTCGTTCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTGTGGCTTTCTAGAGAGTTCTCAGTCCTCAGAAGAACAGTTAACTCCCTGAGCAAATTGTATGATTaGGTAAAGTGTCTGCCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SVWLSREFSVLRRTVNSLSKLYD*VKCLPQ Trigger: TTGCGGCAGACACTTTACCAAATCATACAATTTGCT...CAGGGAGTTAACTGTTCTTCTGAGGACTGAGAACTCTCTAGAAAGCCACACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | TGCGTTTCGTTTTCCATGTCTAGGTGCATCCAACAAGATACAAAAACAGACAGATGTCTGCCGCAAAACTaGCAGATAAACTCCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CVSFSMSRCIQQDTKTDRCLPQN*QINSFF Trigger: GAAAAAGGAGTTTATCTGCAAGTTTTGCGGCAGACA...TCTGTCTGTTTTTGTATCTTGTTGGATGCACCTAGACATGGAAAACGAAACGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS-3UTR CAA 90 bp | GTCTTTAAAGATAAATTTGCGTTTCGTTTTCCATGTCTAGGTGCATCCAACAAGTGTCTGCCGCAAAACTaGCAGATAAACTCCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VFKDKFAFRFPCLGASNKCLPQN*QINSFF Trigger: GAAAAAGGAGTTTATCTGCAAGTTTTGCGGCAGACA...CTTGTTGGATGCACCTAGACATGGAAAACGAAACGCAAATTTATCTTTAAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS GCA 72 bp | AGCGAGGGGAAGGGGAAGCGAGCGTCCACGAGGCCCTaGGCAGCCGCCATCTCCGTGATGGTGGAGCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SEGKGKRASTRP*AAAISVMVERV Trigger: CACCCGCTCCACCATCACGGAGATGGCGGCTGCGCAGGGCCTCGTGGACGCTCGCTTCCCCTTCCCCTCGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS CCA 72 bp | GTAGGGCTGGAAGGACGTGGGCAATGGCCCCCTGCTTaGGGTGGAACAGGTGGGTGGCAAAGGGCAGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VGLEGRGQWPPA*GGTGGWQRAAR Trigger: CCTCGCTGCCCTTTGCCACCCACCTGTTCCACCCCAAGCAGGGGGCCATTGCCCACGTCCTTCCAGCCCTAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS TCA 72 bp | TCCCTCGGGAGGGCTTTCTGTCCGGGTTCAGTTTACTaGGGCCCGAGATGGGGCTCCCCAGCCCTGGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLGRAFCPGSVY*GPRWGSPALGS Trigger: TGAGCCCAGGGCTGGGGAGCCCCATCTCGGGCCTCAGTAAACTGAACCCGGACAGAAAGCCCTCCCGAGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS CCA 72 bp | GCCGGTCCTTGTGTAGGGCTGGAAGGACGTGGGCAATaGCCCCCTGCTTGGGGTGGAACAGGTGGGTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: AGPCVGLEGRGQ*PPAWGGTGGWQ Trigger: TTGCCACCCACCTGTTCCACCCCAAGCAGGGGGCCATTGCCCACGTCCTTCCAGCCCTACACAAGGACCGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS CAA 72 bp | TGTAGGGCTGGAAGGACGTGGGCAATGGCCCCCTGCTaGGGGTGGAACAGGTGGGTGGCAAAGGGCAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: CRAGRTWAMAPC*GWNRWVAKGSE Trigger: CTCGCTGCCCTTTGCCACCCACCTGTTCCACCCCAAGCAGGGGGCCATTGCCCACGTCCTTCCAGCCCTACA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS GCA 72 bp | GCCGCCATCTCCGTGATGGTGGAGCGGGTGATCTCGTaGACACTGGGGTACCCCAGCGTCCAGTGGTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: AAISVMVERVIS*TLGYPSVQWFM Trigger: CATGAACCACTGGACGCTGGGGTACCCCAGTGTGCACGAGATCACCCGCTCCACCATCACGGAGATGGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS GCA 72 bp | TTGTGTAGGGCTGGAAGGACGTGGGCAATGGCCCCCTaGTTGGGGTGGAACAGGTGGGTGGCAAAGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LCRAGRTWAMAP*LGWNRWVAKGS Trigger: GCTGCCCTTTGCCACCCACCTGTTCCACCCCAAGCAGGGGGCCATTGCCCACGTCCTTCCAGCCCTACACAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS CAA 72 bp | ACCGCCAAGTTGGCAAAGTCAAAACGGGGCCGGTCCTaGTGTAGGGCTGGAAGGACGTGGGCAATGGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TAKLAKSKRGRS*CRAGRTWAMAP Trigger: GGGGGCCATTGCCCACGTCCTTCCAGCCCTACACAAGGACCGGCCCCGTTTTGACTTTGCCAACTTGGCGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS CAA 72 bp | CAGCTTGCTCAGGTCTCCCATTTTAGGAGGATCTTCTaGCGTGGCGGCCACCGCCAAGTTGGCAAAGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QLAQVSHFRRIF*RGGHRQVGKVK Trigger: TTTGACTTTGCCAACTTGGCGGTGGCCGCCACGCAAGAAGATCCTCCTAAAATGGGAGACCTGAGCAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS CAA 72 bp | CTGCCGCAAAACTTGCAGATAAACTCCTTTTTCGTTTaGGAGGGCAATCTCCCTCGGGAGGGCTTTCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LPQNLQINSFFV*EGNLPREGFLS Trigger: GGACAGAAAGCCCTCCCGAGGGAGATTGCCCTCCAAAACGAAAAAGGAGTTTATCTGCAAGTTTTGCGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||
| CDS CAA 90 bp | GTAAAGTGTCTGCCGCAAAACTTGCAGATAAACTCCTTTTTCGTTTaGGAGGGCAATCTCCCTCGGGAGGGCTTTCTGTCCGGGTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VKCLPQNLQINSFFV*EGNLPREGFLSGFS Trigger: ACTGAACCCGGACAGAAAGCCCTCCCGAGGGAGATTGCCCTCCAAAACGAAAAAGGAGTTTATCTGCAAGTTTTGCGGCAGACACTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022952.6 ENSMUST00000228152.2 |
||