Pregenerated sensors for OSR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048387Ensembl transcript IDs: ENSMUST00000057021.9, ENSMUST00000217975.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATAAAGTGCCAGTCGCAATACAACGCCCGGCTCCTGGCCGGCTGCTaGCTCGCGCGCAGCGTTGGAACAGAGGAGCGGAGGCCCGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: IKCQSQYNARLLAGC*LARSVGTEERRPGP Trigger: GGGACCGGGCCTCCGCTCCTCTGTTCCAACGCTGCGCGCGAGCCAGCAGCCGGCCAGGAGCCGGGCGTTGTATTGCGACTGGCACTTTAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR GCA 90 bp | AGCATAAAGTGCCAGTCGCAATACAACGCCCGGCTCCTGGCCGGCTaGTGGCTCGCGCGCAGCGTTGGAACAGAGGAGCGGAGGCCCGGT | + |
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Preference number: 1 (lower is better) Translates to: SIKCQSQYNARLLAG*WLARSVGTEERRPG Trigger: ACCGGGCCTCCGCTCCTCTGTTCCAACGCTGCGCGCGAGCCAGCAGCCGGCCAGGAGCCGGGCGTTGTATTGCGACTGGCACTTTATGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR CCA 90 bp | AGATCCCGAAAGCCCCTCCCGCTGCCCGCAGAGTTGCCTTCAGCTTaGGTCCCTCTGGTAGAGAAGGCGGCAGCACGCCCCAGGTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: RSRKPLPLPAELPSA*VPLVEKAAARPRFL Trigger: CAGGAACCTGGGGCGTGCTGCCGCCTTCTCTACCAGAGGGACCCAAGCTGAAGGCAACTCTGCGGGCAGCGGGAGGGGCTTTCGGGATCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR CCA 90 bp | TCAGGAGCGCCGCAAGCGCAAAGGACCCAAGGGATTTTGTTGCTGTaGAAGGAAGATCCCGAAAGCCCCTCCCGCTGCCCGCAGAGTTGC | + |
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Preference number: 1 (lower is better) Translates to: SGAPQAQRTQGILLL*KEDPESPSRCPQSC Trigger: GCAACTCTGCGGGCAGCGGGAGGGGCTTTCGGGATCTTCCTTCCACAGCAACAAAATCCCTTGGGTCCTTTGCGCTTGCGGCGCTCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR GCA 90 bp | AAGAACTCCAGTGATAAATGTCCGTTACCGATGGTCAGCATAAAGTaGCAGTCGCAATACAACGCCCGGCTCCTGGCCGGCTGCTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: KNSSDKCPLPMVSIK*QSQYNARLLAGCWL Trigger: GAGCCAGCAGCCGGCCAGGAGCCGGGCGTTGTATTGCGACTGGCACTTTATGCTGACCATCGGTAACGGACATTTATCACTGGAGTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR CAA 90 bp | AATACAACGCCCGGCTCCTGGCCGGCTGCTGGCTCGCGCGCAGCGTaGGAACAGAGGAGCGGAGGCCCGGTCCCCTTAGCCCCGGGCGCC | + |
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Preference number: 2 (lower is better) Translates to: NTTPGSWPAAGSRAA*EQRSGGPVPLAPGA Trigger: GGCGCCCGGGGCTAAGGGGACCGGGCCTCCGCTCCTCTGTTCCAACGCTGCGCGCGAGCCAGCAGCCGGCCAGGAGCCGGGCGTTGTATT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCTCGCGCGCAGCGTTGGAACAGAGGAGCGGAGGCCCGGTCCCCTTAGCCAGGGGGACTGGAAATTaGCAGGGCGCGCAGATCTTT | + |
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Preference number: 2 (lower is better) Translates to: AGSRAALEQRSGGPVPLARGTGN*QGAQIF Trigger: AAAGATCTGCGCGCCCTGGCAATTTCCAGTCCCCCT...GGCTAAGGGGACCGGGCCTCCGCTCCTCTGTTCCAACGCTGCGCGCGAGCCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR CAA 90 bp | AAGATCCCGAAAGCCCCTCCCGCTGCCCGCAGAGTTGCCTTCAGCTaGGGTCCCTCTGGTAGAGAAGGCGGCAGCACGCCCCAGGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: KIPKAPPAARRVAFS*GPSGREGGSTPQVP Trigger: AGGAACCTGGGGCGTGCTGCCGCCTTCTCTACCAGAGGGACCCAAGCTGAAGGCAACTCTGCGGGCAGCGGGAGGGGCTTTCGGGATCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR CAA 90 bp | GCTGTGGAAGGAAGATCCCGAAAGCCCCTCCCGCTGCCCGCAGAGTaGCCTTCAGCTTGGGTCCCTCTGGTAGAGAAGGCGGCAGCACGC | + |
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Preference number: 2 (lower is better) Translates to: AVEGRSRKPLPLPAE*PSAWVPLVEKAAAR Trigger: GCGTGCTGCCGCCTTCTCTACCAGAGGGACCCAAGCTGAAGGCAACTCTGCGGGCAGCGGGAGGGGCTTTCGGGATCTTCCTTCCACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR-3UTR GCA 90 bp | TGTAGGGATAGGGAAAGGAAGGGGGACTGGAAATTGCCAGGGCGCGCAGATCTTTGTGAGAGGCGCCGCTaGGGCTCAGCGGAGTTTTCG | + |
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Preference number: 2 (lower is better) Translates to: CRDRERKGDWKLPGRADLCERRR*GSAEFS Trigger: CGAAAACTCCGCTGAGCCGCAGCGGCGCCTCTCACA...AAGATCTGCGCGCCCTGGCAATTTCCAGTCCCCCTTCCTTTCCCTATCCCTACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGCGCCGCTGCGGCTCAGCGGAGTTTTCGTTGTGTGTGTGTGTGTGTGTGTGTTGAGTACCGCCTTTTaGCCAAGTTTTAGCCGCGTC | + |
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Preference number: 2 (lower is better) Translates to: EAPLRLSGVFVVCVCVCVLSTAF*PSFSRV Trigger: GACGCGGCTAAAACTTGGCCAAAAGGCGGTACTCAA...CACACACACACACACACACACAACGAAAACTCCGCTGAGCCGCAGCGGCGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR-3UTR CCA 90 bp | TCCAGTGATAAATGTCCGTTACCGATGGTCAGCATAAAGTGCCAGTCGCAATACGAGTTGCCTTCAGCTTaGGTCCCTCTGGTAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: SSDKCPLPMVSIKCQSQYELPSA*VPLVEK Trigger: CTTCTCTACCAGAGGGACCCAAGCTGAAGGCAACTC...GTATTGCGACTGGCACTTTATGCTGACCATCGGTAACGGACATTTATCACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR GCA 72 bp | TGCCAGTCGCAATACAACGCCCGGCTCCTGGCCGGCTaGTGGCTCGCGCGCAGCGTTGGAACAGAGGAGCGG | + |
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Preference number: 3 (lower is better) Translates to: CQSQYNARLLAG*WLARSVGTEER Trigger: CCGCTCCTCTGTTCCAACGCTGCGCGCGAGCCAGCAGCCGGCCAGGAGCCGGGCGTTGTATTGCGACTGGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR CCA 72 bp | CAGTCGCAATACAACGCCCGGCTCCTGGCCGGCTGCTaGCTCGCGCGCAGCGTTGGAACAGAGGAGCGGAGG | + |
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Preference number: 3 (lower is better) Translates to: QSQYNARLLAGC*LARSVGTEERR Trigger: CCTCCGCTCCTCTGTTCCAACGCTGCGCGCGAGCCAGCAGCCGGCCAGGAGCCGGGCGTTGTATTGCGACTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR CCA 72 bp | AAGCCCCTCCCGCTGCCCGCAGAGTTGCCTTCAGCTTaGGTCCCTCTGGTAGAGAAGGCGGCAGCACGCCCC | + |
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Preference number: 3 (lower is better) Translates to: KPLPLPAELPSA*VPLVEKAAARP Trigger: GGGGCGTGCTGCCGCCTTCTCTACCAGAGGGACCCAAGCTGAAGGCAACTCTGCGGGCAGCGGGAGGGGCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR CCA 72 bp | GGGAGCACCCGGGAGTCGCGCGGAGCCAGCGGCCCCTaGGGCCGGATGGCAGAAGCAGATACAAGGATTACA | + |
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Preference number: 3 (lower is better) Translates to: GSTRESRGASGP*GRMAEADTRIT Trigger: TGTAATCCTTGTATCTGCTTCTGCCATCCGGCCCCAGGGGCCGCTGGCTCCGCGCGACTCCCGGGTGCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR-3UTR CAA 90 bp | GTGAGAGGCGCCGCTGCGGCTCAGCGGAGTTTTCGTTGTGTGTGTGTGTGTGTGCCGCTGCCCGCAGAGTaGCCTTCAGCTTGGGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: VRGAAAAQRSFRCVCVCVPLPAE*PSAWVP Trigger: AGGGACCCAAGCTGAAGGCAACTCTGCGGGCAGCGG...CACACACACACACACACAACGAAAACTCCGCTGAGCCGCAGCGGCGCCTCTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR GCA 72 bp | TTGCTGTGGAAGGAAGATCCCGAAAGCCCCTCCCGCTaGCCGCAGAGTTGCCTTCAGCTTGGGTCCCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: LLWKEDPESPSR*PQSCLQLGSLW Trigger: CCAGAGGGACCCAAGCTGAAGGCAACTCTGCGGGCAGCGGGAGGGGCTTTCGGGATCTTCCTTCCACAGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR-3UTR CAA 90 bp | CCCCGGTGTAGGGATAGGGAAAGGAAGGGGGACTGGAAATTGCCAGGGCGCGCACTTCCGGCGTGTGAGTaGAGTACCGCCTTTTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: PRCRDRERKGDWKLPGRALPACE*STAFWP Trigger: TGGCCAAAAGGCGGTACTCAACTCACACGCCGGAAG...TGCGCGCCCTGGCAATTTCCAGTCCCCCTTCCTTTCCCTATCCCTACACCGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR GCA 72 bp | GAGCGCCGCAAGCGCAAAGGACCCAAGGGATTTTGTTaGTGTGGAAGGAAGATCCCGAAAGCCCCTCCCGCT | + |
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Preference number: 3 (lower is better) Translates to: ERRKRKGPKGFC*CGRKIPKAPPA Trigger: AGCGGGAGGGGCTTTCGGGATCTTCCTTCCACAGCAACAAAATCCCTTGGGTCCTTTGCGCTTGCGGCGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR GCA 72 bp | AGTGATAAATGTCCGTTACCGATGGTCAGCATAAAGTaGCAGTCGCAATACAACGCCCGGCTCCTGGCCGGC | + |
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Preference number: 3 (lower is better) Translates to: SDKCPLPMVSIK*QSQYNARLLAG Trigger: GCCGGCCAGGAGCCGGGCGTTGTATTGCGACTGGCACTTTATGCTGACCATCGGTAACGGACATTTATCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR-3UTR CAA 90 bp | TGTAGGGATAGGGAAAGGAAGGGGGACTGGAAATTGCCAGGGCGCGCAGATCTTAGAGTTGCCTTCAGCTaGGGTCCCTCTGGTAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: CRDRERKGDWKLPGRADLRVAFS*GPSGRE Trigger: TTCTCTACCAGAGGGACCCAAGCTGAAGGCAACTCT...AAGATCTGCGCGCCCTGGCAATTTCCAGTCCCCCTTCCTTTCCCTATCCCTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR TCA 90 bp | TGCTGGCTCGCGCGCAGCGTTGGAACAGAGGAGCGGAGGCCCGGTCCCCTTAGCAGCTGCAGGGATGGGTaGATGGGTACCGGTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: CWLARSVGTEERRPGPLSSCRDG*MGTGAG Trigger: GCCAGCACCGGTACCCATTCACCCATCCCTGCAGCT...GCTAAGGGGACCGGGCCTCCGCTCCTCTGTTCCAACGCTGCGCGCGAGCCAGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CCA 90 bp | GCTGCTGGCTCGCGCGCAGCGTTGGAACAGAGGAGCGGAGGCCCGGTCCCCTTATACAGGTTGGGCAGGTaGTCCGAGGGCACTGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: AAGSRAALEQRSGGPVPLYRLGR*SEGTVG Trigger: GCCCACAGTGCCCTCGGACCACCTGCCCAACCTGTA...TAAGGGGACCGGGCCTCCGCTCCTCTGTTCCAACGCTGCGCGCGAGCCAGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR CAA 72 bp | AAAGCCCCTCCCGCTGCCCGCAGAGTTGCCTTCAGCTaGGGTCCCTCTGGTAGAGAAGGCGGCAGCACGCCC | + |
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Preference number: 4 (lower is better) Translates to: KAPPAARRVAFS*GPSGREGGSTP Trigger: GGGCGTGCTGCCGCCTTCTCTACCAGAGGGACCCAAGCTGAAGGCAACTCTGCGGGCAGCGGGAGGGGCTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CCA 90 bp | GCTGCTGGCTCGCGCGCAGCGTTGGAACAGAGGAGCGGAGGCCCGGTCCCCTTAGCGAGAGTCCGGGACTaGCAGAATCCTTTCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: AAGSRAALEQRSGGPVPLARVRD*QNPFPH Trigger: GTGTGGGAAAGGATTCTGCCAGTCCCGGACTCTCGC...TAAGGGGACCGGGCCTCCGCTCCTCTGTTCCAACGCTGCGCGCGAGCCAGCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CCA 90 bp | GCTGGCTCGCGCGCAGCGTTGGAACAGAGGAGCGGAGGCCCGGTCCCCTTAGCCATTCCTTCTTGGTCTTaGAAGGCAGGCGTCCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: AGSRAALEQRSGGPVPLAIPSWS*KAGVPL Trigger: CAAGGGGACGCCTGCCTTCCAAGACCAAGAAGGAAT...GGCTAAGGGGACCGGGCCTCCGCTCCTCTGTTCCAACGCTGCGCGCGAGCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR TCA 90 bp | CGCAATACAACGCCCGGCTCCTGGCCGGCTGCTGGCTCGCGCGCAGCGTTGGAAATCTCTGGCTTAGGGTaGATGACGTGGGGAAACCAG | + |
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Preference number: 4 (lower is better) Translates to: RNTTPGSWPAAGSRAALEISGLG*MTWGNQ Trigger: CTGGTTTCCCCACGTCATTCACCCTAAGCCAGAGAT...TTCCAACGCTGCGCGCGAGCCAGCAGCCGGCCAGGAGCCGGGCGTTGTATTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CCA 90 bp | AGATCCCGAAAGCCCCTCCCGCTGCCCGCAGAGTTGCCTTCAGCTTGGGTCCCTAAACCAGGGGAAGGCTaGCAGCTGGAAGCGAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: RSRKPLPLPAELPSAWVPKPGEG*QLEASV Trigger: GACGCTCGCTTCCAGCTGCCAGCCTTCCCCTGGTTT...AGGGACCCAAGCTGAAGGCAACTCTGCGGGCAGCGGGAGGGGCTTTCGGGATCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CCA 90 bp | CGCAATACAACGCCCGGCTCCTGGCCGGCTGCTGGCTCGCGCGCAGCGTTGGAAGCTGGACACCGCACCTaGCACTTTAGAAAAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: RNTTPGSWPAAGSRAALEAGHRT*HFRKRG Trigger: TCCTCTTTTTCTAAAGTGCCAGGTGCGGTGTCCAGC...TTCCAACGCTGCGCGCGAGCCAGCAGCCGGCCAGGAGCCGGGCGTTGTATTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CCA 90 bp | GTAGAGAAGGCGGCAGCACGCCCCAGGTTCCTGGCGCCCCGCAGGCTCTGTTTAAATGGGTACCGGTGCTaGCAAGGTTTTGCTGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: VEKAAARPRFLAPRRLCLNGYRC*QGFAAH Trigger: ATGGGCAGCAAAACCTTGCCAGCACCGGTACCCATT...TAAACAGAGCCTGCGGGGCGCCAGGAACCTGGGGCGTGCTGCCGCCTTCTCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR CAA 72 bp | GGAGCGCCGCAAGCGCAAAGGACCCAAGGGATTTTGTaGCTGTGGAAGGAAGATCCCGAAAGCCCCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: GAPQAQRTQGIL*LWKEDPESPSR Trigger: GCGGGAGGGGCTTTCGGGATCTTCCTTCCACAGCAACAAAATCCCTTGGGTCCTTTGCGCTTGCGGCGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CCA 90 bp | CCGGCGTGTGAGTTGAGTACCGCCTTTTGGCCAAGTTTTAGCCGCGTCCTAGGGTCCCGCGGTGATCTCTaGCTTAGGGTGAATGACGTG | + |
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Preference number: 4 (lower is better) Translates to: PACELSTAFWPSFSRVLGSRGDL*LRVNDV Trigger: CACGTCATTCACCCTAAGCCAGAGATCACCGCGGGA...CCCTAGGACGCGGCTAAAACTTGGCCAAAAGGCGGTACTCAACTCACACGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CCA 90 bp | ACCCAAGGGATTTTGTTGCTGTGGAAGGAAGATCCCGAAAGCCCCTCCCGCTGCCTCGGCCAAGCTTGGTaGGATCCTCTTGTGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TQGILLLWKEDPESPSRCLGQAW*DPLVWQ Trigger: CTGCCACACAAGAGGATCCCACCAAGCTTGGCCGAG...GCAGCGGGAGGGGCTTTCGGGATCTTCCTTCCACAGCAACAAAATCCCTTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CCA 90 bp | CCCTGGGGCCGGATGGCAGAAGCAGATACAAGGATTACATTTTCGCAGGGTCCCGAGTGTAGCGTCTTGTaGACAGCGAGAGTCCGGGAC | + |
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Preference number: 4 (lower is better) Translates to: PWGRMAEADTRITFSQGPECSVL*TARVRD Trigger: GTCCCGGACTCTCGCTGTCCACAAGACGCTACACTC...GGGACCCTGCGAAAATGTAATCCTTGTATCTGCTTCTGCCATCCGGCCCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR CAA 72 bp | TCAGGAGCGCCGCAAGCGCAAAGGACCCAAGGGATTTaGTTGCTGTGGAAGGAAGATCCCGAAAGCCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SGAPQAQRTQGI*LLWKEDPESPS Trigger: GGAGGGGCTTTCGGGATCTTCCTTCCACAGCAACAAAATCCCTTGGGTCCTTTGCGCTTGCGGCGCTCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR GCA 90 bp | CCCTGGGGCCGGATGGCAGAAGCAGATACAAGGATTACATTTTCGCAGGGTCCCGTGAATGGGTACCGGTaGTGGCAAGGTTTTGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PWGRMAEADTRITFSQGPVNGYR*WQGFAA Trigger: GGCAGCAAAACCTTGCCAGCACCGGTACCCATTCAC...GGGACCCTGCGAAAATGTAATCCTTGTATCTGCTTCTGCCATCCGGCCCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CCA 90 bp | TGTAGGGATAGGGAAAGGAAGGGGGACTGGAAATTGCCAGGGCGCGCAGATCTTAGGCAAGTGCATGGCTaGGTAGCCCAGCGTCCATTG | + |
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Preference number: 4 (lower is better) Translates to: CRDRERKGDWKLPGRADLRQVHG*VAQRPL Trigger: CAATGGACGCTGGGCTACCCAGCCATGCACTTGCCT...AAGATCTGCGCGCCCTGGCAATTTCCAGTCCCCCTTCCTTTCCCTATCCCTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| 3UTR CAA 72 bp | TGTGAGAGGCGCCGCTGCGGCTCAGCGGAGTTTTCGTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: CERRRCGSAEFS*CVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACAACGAAAACTCCGCTGAGCCGCAGCGGCGCCTCTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR TCA 90 bp | GTGAGAGGCGCCGCTGCGGCTCAGCGGAGTTTTCGTTGTGTGTGTGTGTGTGTGGGCTTCTCTTTGGAGTaGATATATCTGTGGTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: VRGAAAAQRSFRCVCVCVGFSLE*IYLWSR Trigger: ACGGGACCACAGATATATTCACTCCAAAGAGAAGCC...CACACACACACACACACAACGAAAACTCCGCTGAGCCGCAGCGGCGCCTCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CCA 90 bp | CCGGCGTGTGAGTTGAGTACCGCCTTTTGGCCAAGTTTTAGCCGCGTCCTAGGGAAACGAATTCCTTCTTaGTCTTGGAAGGCAGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: PACELSTAFWPSFSRVLGKRIPS*SWKAGV Trigger: GACGCCTGCCTTCCAAGACCAAGAAGGAATTCGTTT...CCCTAGGACGCGGCTAAAACTTGGCCAAAAGGCGGTACTCAACTCACACGCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CCA 90 bp | TCCAGTGATAAATGTCCGTTACCGATGGTCAGCATAAAGTGCCAGTCGCAATACATCGAGGCAAGTGCATaGCTGGGTAGCCCAGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: SSDKCPLPMVSIKCQSQYIEASA*LGSPAS Trigger: GGACGCTGGGCTACCCAGCCATGCACTTGCCTCGAT...GTATTGCGACTGGCACTTTATGCTGACCATCGGTAACGGACATTTATCACTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR TCA 90 bp | TCCAGTGATAAATGTCCGTTACCGATGGTCAGCATAAAGTGCCAGTCGCAATACCCGCATGAAGAGCGCTaGAACCATACAGGTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SSDKCPLPMVSIKCQSQYPHEER*NHTGWA Trigger: TGCCCAACCTGTATGGTTTCAGCGCTCTTCATGCGG...GTATTGCGACTGGCACTTTATGCTGACCATCGGTAACGGACATTTATCACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CAA 90 bp | GCTGCTGGCTCGCGCGCAGCGTTGGAACAGAGGAGCGGAGGCCCGGTCCCCTTACTGAAACCATACAGGTaGGGCAGGTGGTCCGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: AAGSRAALEQRSGGPVPLLKPYR*GRWSEG Trigger: GCCCTCGGACCACCTGCCCAACCTGTATGGTTTCAG...TAAGGGGACCGGGCCTCCGCTCCTCTGTTCCAACGCTGCGCGCGAGCCAGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CAA 90 bp | TGCTGGCTCGCGCGCAGCGTTGGAACAGAGGAGCGGAGGCCCGGTCCCCTTAGCTGTGAGTGTAGCGTCTaGTGGACAGCGAGAGTCCGG | + |
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Preference number: 5 (lower is better) Translates to: CWLARSVGTEERRPGPLSCECSV*WTARVR Trigger: CCGGACTCTCGCTGTCCACAAGACGCTACACTCACA...GCTAAGGGGACCGGGCCTCCGCTCCTCTGTTCCAACGCTGCGCGCGAGCCAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CAA 90 bp | GTAGAGAAGGCGGCAGCACGCCCCAGGTTCCTGGCGCCCCGCAGGCTCTGTTTATCCCCTCGGCCAAGCTaGGTGGGATCCTCTTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: VEKAAARPRFLAPRRLCLSPRPS*VGSSCV Trigger: CACACAAGAGGATCCCACCAAGCTTGGCCGAGGGGA...TAAACAGAGCCTGCGGGGCGCCAGGAACCTGGGGCGTGCTGCCGCCTTCTCTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS CCA 90 bp | GATCTCTGGCTTAGGGTGAATGACGTGGGGAAACCAGGGGAAGGCTaGCAGCTGGAAGCGAGCGTCCATCAGGCTGGACACCGCACCTGG | + |
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Preference number: 5 (lower is better) Translates to: DLWLRVNDVGKPGEG*QLEASVHQAGHRTW Trigger: CCAGGTGCGGTGTCCAGCCTGATGGACGCTCGCTTCCAGCTGCCAGCCTTCCCCTGGTTTCCCCACGTCATTCACCCTAAGCCAGAGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS CCA 90 bp | AGGCTTGGTCTTAAGTGCTGCGCCGCTGCCTCCCGCGGTGATCTCTaGCTTAGGGTGAATGACGTGGGGAAACCAGGGGAAGGCTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: RLGLKCCAAASRGDL*LRVNDVGKPGEGWQ Trigger: CTGCCAGCCTTCCCCTGGTTTCCCCACGTCATTCACCCTAAGCCAGAGATCACCGCGGGAGGCAGCGGCGCAGCACTTAAGACCAAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS CCA 90 bp | GGCTGGCAGCTGGAAGCGAGCGTCCATCAGGCTGGACACCGCACCTaGCACTTTAGAAAAAGAGGATCGAGGCAAGTGCATGGCTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: GWQLEASVHQAGHRT*HFRKRGSRQVHGWV Trigger: TACCCAGCCATGCACTTGCCTCGATCCTCTTTTTCTAAAGTGCCAGGTGCGGTGTCCAGCCTGATGGACGCTCGCTTCCAGCTGCCAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS-3UTR CAA 90 bp | CCTGGGGCCGGATGGCAGAAGCAGATACAAGGATTACATTTTCGCAGGGTCCCCGTAGCCCAGCGTCCATaGGTGCAGATGCACCGCATG | + |
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Preference number: 5 (lower is better) Translates to: PGAGWQKQIQGLHFRRVPVAQRP*VQMHRM Trigger: CATGCGGTGCATCTGCACCAATGGACGCTGGGCTAC...GGGGACCCTGCGAAAATGTAATCCTTGTATCTGCTTCTGCCATCCGGCCCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CAA 90 bp | AGATCCCGAAAGCCCCTCCCGCTGCCCGCAGAGTTGCCTTCAGCTTGGGTCCCTCAAACGAATTCCTTCTaGGTCTTGGAAGGCAGGCGT | + |
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Preference number: 5 (lower is better) Translates to: RSRKPLPLPAELPSAWVPQTNSF*VLEGRR Trigger: ACGCCTGCCTTCCAAGACCAAGAAGGAATTCGTTTG...AGGGACCCAAGCTGAAGGCAACTCTGCGGGCAGCGGGAGGGGCTTTCGGGATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CAA 90 bp | CCCGCAGAGTTGCCTTCAGCTTGGGTCCCTCTGGTAGAGAAGGCGGCAGCACGCTGGCGGCCACAGAACTaGCAAACGAATTCCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: PAELPSAWVPLVEKAAARWRPQN*QTNSFL Trigger: CAAGAAGGAATTCGTTTGCAAGTTCTGTGGCCGCCA...GCGTGCTGCCGCCTTCTCTACCAGAGGGACCCAAGCTGAAGGCAACTCTGCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS GCA 90 bp | CAAGGCCAGGTTAGCGAAATCAAAGCGAGGCTTGGTCTTAAGTGCTaGGCCGCTGCCTCCCGCGGTGATCTCTGGCTTAGGGTGAATGAC | + |
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Preference number: 5 (lower is better) Translates to: QGQVSEIKARLGLKC*AAASRGDLWLRVND Trigger: GTCATTCACCCTAAGCCAGAGATCACCGCGGGAGGCAGCGGCGCAGCACTTAAGACCAAGCCTCGCTTTGATTTCGCTAACCTGGCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS GCA 90 bp | AGCCAAGGCCAGGTTAGCGAAATCAAAGCGAGGCTTGGTCTTAAGTaGTGCGCCGCTGCCTCCCGCGGTGATCTCTGGCTTAGGGTGAAT | + |
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Preference number: 5 (lower is better) Translates to: SQGQVSEIKARLGLK*CAAASRGDLWLRVN Trigger: ATTCACCCTAAGCCAGAGATCACCGCGGGAGGCAGCGGCGCAGCACTTAAGACCAAGCCTCGCTTTGATTTCGCTAACCTGGCCTTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS-3UTR CAA 90 bp | CCCTGGGGCCGGATGGCAGAAGCAGATACAAGGATTACATTTTCGCAGGGTCCCAAGGCAGGCGTCCCCTaGTTGGCTTCTTTTCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: PWGRMAEADTRITFSQGPKAGVP*LASFLG Trigger: CCCCAGAAAAGAAGCCAACAAGGGGACGCCTGCCTT...GGGACCCTGCGAAAATGTAATCCTTGTATCTGCTTCTGCCATCCGGCCCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CAA 90 bp | GTGAGAGGCGCCGCTGCGGCTCAGCGGAGTTTTCGTTGTGTGTGTGTGTGTGTGAATTCCTTCTTGGTCTaGGAAGGCAGGCGTCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: VRGAAAAQRSFRCVCVCVNSFLV*EGRRPL Trigger: AAGGGGACGCCTGCCTTCCAAGACCAAGAAGGAATT...CACACACACACACACACAACGAAAACTCCGCTGAGCCGCAGCGGCGCCTCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS CCA 90 bp | CGCACCTGGCACTTTAGAAAAAGAGGATCGAGGCAAGTGCATGGCTaGGTAGCCCAGCGTCCATTGGTGCAGATGCACCGCATGAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: RTWHFRKRGSRQVHG*VAQRPLVQMHRMKS Trigger: GCTCTTCATGCGGTGCATCTGCACCAATGGACGCTGGGCTACCCAGCCATGCACTTGCCTCGATCCTCTTTTTCTAAAGTGCCAGGTGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS-3UTR CAA 90 bp | ACCCAAGGGATTTTGTTGCTGTGGAAGGAAGATCCCGAAAGCCCCTCCCGCTGCAAATCAAAGCGAGGCTaGGTCTTAAGTGCTGCGCCG | + |
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Preference number: 5 (lower is better) Translates to: TQGILLLWKEDPESPSRCKSKRG*VLSAAP Trigger: CGGCGCAGCACTTAAGACCAAGCCTCGCTTTGATTT...GCAGCGGGAGGGGCTTTCGGGATCTTCCTTCCACAGCAACAAAATCCCTTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS-3UTR CAA 90 bp | CCTGGGGCCGGATGGCAGAAGCAGATACAAGGATTACATTTTCGCAGGGTCCCCTTGATCTTGGAGGTTTaGAGCTCCTTCACTTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: PGAGWQKQIQGLHFRRVPLILEV*SSFTCE Trigger: CTCACAAGTGAAGGAGCTCAAAACCTCCAAGATCAA...GGGGACCCTGCGAAAATGTAATCCTTGTATCTGCTTCTGCCATCCGGCCCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS TCA 72 bp | GCGCCGCTGCCTCCCGCGGTGATCTCTGGCTTAGGGTaGATGACGTGGGGAAACCAGGGGAAGGCTGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: APLPPAVISGLG*MTWGNQGKAGS Trigger: GCTGCCAGCCTTCCCCTGGTTTCCCCACGTCATTCACCCTAAGCCAGAGATCACCGCGGGAGGCAGCGGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS CAA 72 bp | GCAGCCAAGGCCAGGTTAGCGAAATCAAAGCGAGGCTaGGTCTTAAGTGCTGCGCCGCTGCCTCCCGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: AAKARLAKSKRG*VLSAAPLPPAV Trigger: CACCGCGGGAGGCAGCGGCGCAGCACTTAAGACCAAGCCTCGCTTTGATTTCGCTAACCTGGCCTTGGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS CCA 72 bp | CTTAGGGTGAATGACGTGGGGAAACCAGGGGAAGGCTaGCAGCTGGAAGCGAGCGTCCATCAGGCTGGACAC | + |
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Preference number: 6 (lower is better) Translates to: LRVNDVGKPGEG*QLEASVHQAGH Trigger: GTGTCCAGCCTGATGGACGCTCGCTTCCAGCTGCCAGCCTTCCCCTGGTTTCCCCACGTCATTCACCCTAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS CCA 72 bp | CTTAAGTGCTGCGCCGCTGCCTCCCGCGGTGATCTCTaGCTTAGGGTGAATGACGTGGGGAAACCAGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LKCCAAASRGDL*LRVNDVGKPGE Trigger: TTCCCCTGGTTTCCCCACGTCATTCACCCTAAGCCAGAGATCACCGCGGGAGGCAGCGGCGCAGCACTTAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS CAA 90 bp | TCTTGTGTGGCAGCCAAGGCCAGGTTAGCGAAATCAAAGCGAGGCTaGGTCTTAAGTGCTGCGCCGCTGCCTCCCGCGGTGATCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SCVAAKARLAKSKRG*VLSAAPLPPAVISG Trigger: GCCAGAGATCACCGCGGGAGGCAGCGGCGCAGCACTTAAGACCAAGCCTCGCTTTGATTTCGCTAACCTGGCCTTGGCTGCCACACAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS TCA 72 bp | GCGTCCATTGGTGCAGATGCACCGCATGAAGAGCGCTaGAACCATACAGGTTGGGCAGGTGGTCCGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: ASIGADAPHEER*NHTGWAGGPRA Trigger: TGCCCTCGGACCACCTGCCCAACCTGTATGGTTTCAGCGCTCTTCATGCGGTGCATCTGCACCAATGGACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS CAA 72 bp | TCGAGGCAAGTGCATGGCTGGGTAGCCCAGCGTCCATaGGTGCAGATGCACCGCATGAAGAGCGCTGAAACC | + |
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Preference number: 6 (lower is better) Translates to: SRQVHGWVAQRP*VQMHRMKSAET Trigger: GGTTTCAGCGCTCTTCATGCGGTGCATCTGCACCAATGGACGCTGGGCTACCCAGCCATGCACTTGCCTCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS GCA 72 bp | GTTAGCGAAATCAAAGCGAGGCTTGGTCTTAAGTGCTaGGCCGCTGCCTCCCGCGGTGATCTCTGGCTTAGG | + |
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Preference number: 6 (lower is better) Translates to: VSEIKARLGLKC*AAASRGDLWLR Trigger: CCTAAGCCAGAGATCACCGCGGGAGGCAGCGGCGCAGCACTTAAGACCAAGCCTCGCTTTGATTTCGCTAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS GCA 72 bp | CAGGTTAGCGAAATCAAAGCGAGGCTTGGTCTTAAGTaGTGCGCCGCTGCCTCCCGCGGTGATCTCTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: QVSEIKARLGLK*CAAASRGDLWL Trigger: AAGCCAGAGATCACCGCGGGAGGCAGCGGCGCAGCACTTAAGACCAAGCCTCGCTTTGATTTCGCTAACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS CCA 72 bp | AACCATACAGGTTGGGCAGGTGGTCCGAGGGCACTGTaGGCAGGCCATTCACTGCCTGAAGGAAAGAGTAAT | + |
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Preference number: 6 (lower is better) Translates to: NHTGWAGGPRAL*AGHSLPEGKSN Trigger: ATTACTCTTTCCTTCAGGCAGTGAATGGCCTGCCCACAGTGCCCTCGGACCACCTGCCCAACCTGTATGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS CCA 72 bp | CACTTTAGAAAAAGAGGATCGAGGCAAGTGCATGGCTaGGTAGCCCAGCGTCCATTGGTGCAGATGCACCGC | + |
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Preference number: 6 (lower is better) Translates to: HFRKRGSRQVHG*VAQRPLVQMHR Trigger: GCGGTGCATCTGCACCAATGGACGCTGGGCTACCCAGCCATGCACTTGCCTCGATCCTCTTTTTCTAAAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS CCA 72 bp | CTGGAAGCGAGCGTCCATCAGGCTGGACACCGCACCTaGCACTTTAGAAAAAGAGGATCGAGGCAAGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: LEASVHQAGHRT*HFRKRGSRQVH Trigger: ATGCACTTGCCTCGATCCTCTTTTTCTAAAGTGCCAGGTGCGGTGTCCAGCCTGATGGACGCTCGCTTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS CAA 90 bp | AAAAGAGGATCGAGGCAAGTGCATGGCTGGGTAGCCCAGCGTCCATaGGTGCAGATGCACCGCATGAAGAGCGCTGAAACCATACAGGTT | + |
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Preference number: 6 (lower is better) Translates to: KRGSRQVHGWVAQRP*VQMHRMKSAETIQV Trigger: AACCTGTATGGTTTCAGCGCTCTTCATGCGGTGCATCTGCACCAATGGACGCTGGGCTACCCAGCCATGCACTTGCCTCGATCCTCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057021.9 ENSMUST00000217975.2 |
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| CDS CCA 72 bp | AGTGGCGGCCACAGAACTTGCAAACGAATTCCTTCTTaGTCTTGGAAGGCAGGCGTCCCCTTGTTGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SGGHRTCKRIPS*SWKAGVPLLAS Trigger: AGAAGCCAACAAGGGGACGCCTGCCTTCCAAGACCAAGAAGGAATTCGTTTGCAAGTTCTGTGGCCGCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS CAA 72 bp | AAGTGGCGGCCACAGAACTTGCAAACGAATTCCTTCTaGGTCTTGGAAGGCAGGCGTCCCCTTGTTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: KWRPQNLQTNSF*VLEGRRPLVGF Trigger: GAAGCCAACAAGGGGACGCCTGCCTTCCAAGACCAAGAAGGAATTCGTTTGCAAGTTCTGTGGCCGCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS CAA 72 bp | GAGGTTTTGAGCTCCTTCACTTGTGAGTGTAGCGTCTaGTGGACAGCGAGAGTCCGGGACTGGCAGAATCCT | + |
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Preference number: 6 (lower is better) Translates to: EVLSSFTCECSV*WTARVRDWQNP Trigger: AGGATTCTGCCAGTCCCGGACTCTCGCTGTCCACAAGACGCTACACTCACAAGTGAAGGAGCTCAAAACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS CCA 72 bp | GTTTTGAGCTCCTTCACTTGTGAGTGTAGCGTCTTGTaGACAGCGAGAGTCCGGGACTGGCAGAATCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VLSSFTCECSVL*TARVRDWQNPF Trigger: GAAAGGATTCTGCCAGTCCCGGACTCTCGCTGTCCACAAGACGCTACACTCACAAGTGAAGGAGCTCAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS CAA 90 bp | GACTTAGTGAAGTGGCGGCCACAGAACTTGCAAACGAATTCCTTCTaGGTCTTGGAAGGCAGGCGTCCCCTTGTTGGCTTCTTTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: DLVKWRPQNLQTNSF*VLEGRRPLVGFFSG Trigger: CCCAGAAAAGAAGCCAACAAGGGGACGCCTGCCTTCCAAGACCAAGAAGGAATTCGTTTGCAAGTTCTGTGGCCGCCACTTCACTAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS CCA 72 bp | GGCCACAGAACTTGCAAACGAATTCCTTCTTGGTCTTaGAAGGCAGGCGTCCCCTTGTTGGCTTCTTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: GHRTCKRIPSWS*KAGVPLLASFL Trigger: CAGAAAAGAAGCCAACAAGGGGACGCCTGCCTTCCAAGACCAAGAAGGAATTCGTTTGCAAGTTCTGTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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| CDS CAA 72 bp | CGGCCACAGAACTTGCAAACGAATTCCTTCTTGGTCTaGGAAGGCAGGCGTCCCCTTGTTGGCTTCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: RPQNLQTNSFLV*EGRRPLVGFFS Trigger: AGAAAAGAAGCCAACAAGGGGACGCCTGCCTTCCAAGACCAAGAAGGAATTCGTTTGCAAGTTCTGTGGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057021.9 |
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