Pregenerated sensors for OSM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058755Ensembl transcript IDs: ENSMUST00000075221.3
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCTCACCAGCTTCTGAGACCTTTCAAGAGGACTGGTTCAGCCTGTaGAAAATTTCACAACACATCACCAGAGGGAGCATCATGCAGCGA | + |
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Preference number: 1 (lower is better) Translates to: CSPASETFQEDWFSL*KISQHITRGSIMQR Trigger: TCGCTGCATGATGCTCCCTCTGGTGATGTGTTGTGAAATTTTTCACAGGCTGAACCAGTCCTCTTGAAAGGTCTCAGAAGCTGGTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTCTGGAGGAAACAGTTTCAAGTCATGAGAGGAAAGGACCAACAGCCCGAACCTCCGGCCCCACGTaGTCCGACCCAGCCACCCCA | + |
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Preference number: 2 (lower is better) Translates to: GSLEETVSSHERKGPTARTSGPT*SDPATP Trigger: TGGGGTGGCTGGGTCGGACCACGTGGGGCCGGAGGT...TCGGGCTGTTGGTCCTTTCCTCTCATGACTTGAAACTGTTTCCTCCAGACTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| 3UTR-3UTR CCA 90 bp | GTAATTGCTCACCAGCTTCTGAGACCTTTCAAGAGGACTGGTTCAGCCTGTGAACTAGGACTGGAGGCTTaGAGTGGGGACACAATAACC | + |
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Preference number: 2 (lower is better) Translates to: VIAHQLLRPFKRTGSACELGLEA*SGDTIT Trigger: GGTTATTGTGTCCCCACTCCAAGCCTCCAGTCCTAG...TTCACAGGCTGAACCAGTCCTCTTGAAAGGTCTCAGAAGCTGGTGAGCAATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| 3UTR-3UTR CCA 90 bp | CCCATAAACACACCCCACAACCGTTTGCACCACAGGTTCCCATTTACAGAGACTGATCAGACCTCTCTTTaGAACCCAGCCACAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: PINTPHNRLHHRFPFTETDQTSL*NPATGK Trigger: TTTCCCTGTGGCTGGGTTCCAAAGAGAGGTCTGATC...AGTCTCTGTAAATGGGAACCTGTGGTGCAAACGGTTGTGGGGTGTGTTTATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| 3UTR CAA 90 bp | CTTTTAGGCACTGGGAGATCTCCCATAAACACACCCCACAACCGTTaGCACCACAGGTTCCCATTTACAGAGACTTTGATGTCCACCCTA | + |
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Preference number: 2 (lower is better) Translates to: LLGTGRSPINTPHNR*HHRFPFTETLMSTL Trigger: TAGGGTGGACATCAAAGTCTCTGTAAATGGGAACCTGTGGTGCAAACGGTTGTGGGGTGTGTTTATGGGAGATCTCCCAGTGCCTAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| 3UTR-3UTR GCA 90 bp | ATTTCACAACACATCACCAGAGGGAGCATCATGCAGCGAGGACCCAAAACAGGGTGTATCACCAGACTATaGTGTCTGTCAGTGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: ISQHITRGSIMQRGPKTGCITRL*CLSVCP Trigger: AGGACACACTGACAGACAGCATAGTCTGGTGATACA...CCCTGTTTTGGGTCCTCGCTGCATGATGCTCCCTCTGGTGATGTGTTGTGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| 3UTR TCA 72 bp | GGTAGGACACCCTGCCCCTGTCGCAACTGCCAAGTGTaGGGTCACCCAGAGGTCCAGGTATCTGTCCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: GRTPCPCRNCQV*GHPEVQVSVLS Trigger: ACTCAGGACAGATACCTGGACCTCTGGGTGACCTCACACTTGGCAGTTGCGACAGGGGCAGGGTGTCCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| 3UTR CCA 72 bp | TGGTCCGACCCAGCCACCCCACTAGGACTGGAGGCTTaGAGTGGGGACACAATAACCTCACTATCCTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: WSDPATPLGLEA*SGDTITSLSLK Trigger: CTTCAAGGATAGTGAGGTTATTGTGTCCCCACTCCAAGCCTCCAGTCCTAGTGGGGTGGCTGGGTCGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| 3UTR TCA 72 bp | GTGACCCCTGGTGACAGAAGCAGCTTTGAAAGCCTCTaGGAGCGACATCCTGTATCACCAGACTATGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: VTPGDRSSFESL*ERHPVSPDYAV Trigger: GACAGCATAGTCTGGTGATACAGGATGTCGCTCTCAGAGGCTTTCAAAGCTGCTTCTGTCACCAGGGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| 3UTR TCA 72 bp | AGAGGTCCAGGTATCTGTCCTGAGTGGGATAAGGCATaGGAGAGAGCACCGGATCAGACCTCTCTTTGGAAC | + |
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Preference number: 3 (lower is better) Translates to: RGPGICPEWDKA*ERAPDQTSLWN Trigger: GTTCCAAAGAGAGGTCTGATCCGGTGCTCTCTCTCATGCCTTATCCCACTCAGGACAGATACCTGGACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| 3UTR GCA 72 bp | AAGCCTCTGAGAGCGACATCCTGTATCACCAGACTATaGTGTCTGTCAGTGTGTCCTCAGGCTACCAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: KPLRATSCITRL*CLSVCPQATRE Trigger: TTCCCTGGTAGCCTGAGGACACACTGACAGACAGCATAGTCTGGTGATACAGGATGTCGCTCTCAGAGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| 3UTR-3UTR CAA 90 bp | ATTTCACAACACATCACCAGAGGGAGCATCATGCAGCGAGGACCCAAAACAGGGGTGACAGAAGCAGCTTaGAAAGCCTCTGAGAGCGAC | + |
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Preference number: 3 (lower is better) Translates to: ISQHITRGSIMQRGPKTGVTEAA*KASESD Trigger: GTCGCTCTCAGAGGCTTTCAAAGCTGCTTCTGTCAC...CCCTGTTTTGGGTCCTCGCTGCATGATGCTCCCTCTGGTGATGTGTTGTGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| 3UTR TCA 72 bp | ACAGTCACACAGAGAATTAGGGAACAAGCTAGGCTCTaGGCTCTCTTCCCTGAACGCCCAGATCAGTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: TVTQRIREQARL*ALFPERPDQCS Trigger: GGAACACTGATCTGGGCGTTCAGGGAAGAGAGCTCAGAGCCTAGCTTGTTCCCTAATTCTCTGTGTGACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| 3UTR TCA 72 bp | GACACTCAACTTCACCCCTTAAAGTGCTCTTCTGTGTaGCCCCTGGTGACAGAAGCAGCTTTGAAAGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: DTQLHPLKCSSV*PLVTEAALKAS Trigger: AGAGGCTTTCAAAGCTGCTTCTGTCACCAGGGGTCACACAGAAGAGCACTTTAAGGGGTGAAGTTGAGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| 3UTR TCA 72 bp | GCTTCTGAGACCTTTCAAGAGGACTGGTTCAGCCTGTaGAAAATTTCACAACACATCACCAGAGGGAGCATC | + |
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Preference number: 3 (lower is better) Translates to: ASETFQEDWFSL*KISQHITRGSI Trigger: GATGCTCCCTCTGGTGATGTGTTGTGAAATTTTTCACAGGCTGAACCAGTCCTCTTGAAAGGTCTCAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR TCA 90 bp | GGCATGAGAGAGAGCACCGGATCAGACCTCTCTTTGGAACCCAGCCACAGGGAAGAAGACCCTCCCCACTaGGCCCATGAAGCGATGGTA | + |
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Preference number: 4 (lower is better) Translates to: GMRESTGSDLSLEPSHREEDPPH*AHEAMV Trigger: TACCATCGCTTCATGGGCTCAGTGGGGAGGGTCTTC...TTCCCTGTGGCTGGGTTCCAAAGAGAGGTCTGATCCGGTGCTCTCTCTCATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR TCA 90 bp | GTCCTGAGTGGTAGTAGGGGACACTCAACTTCACCCCTTAAAGTGCTCTTCTGTCCCGTGAGGTTCGCCTaGTTCTGCAGCTGGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VLSGSRGHSTSPLKVLFCPVRFA*FCSWLR Trigger: CCTCAGCCAGCTGCAGAATCAGGCGAACCTCACGGG...ACAGAAGAGCACTTTAAGGGGTGAAGTTGAGTGTCCCCTACTACCACTCAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR TCA 90 bp | AATTTCACAACACATCACCAGAGGGAGCATCATGCAGCGAGGACCCAAAACAGGTCTCCAGGGAGTGGTTaGGCAGCCGGGCCATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: NFTTHHQREHHAARTQNRSPGSG*AAGPCR Trigger: TCTGCATGGCCCGGCTGCTCAACCACTCCCTGGAGA...CCTGTTTTGGGTCCTCGCTGCATGATGCTCCCTCTGGTGATGTGTTGTGAAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR TCA 90 bp | TCCTGTATCACCAGACTATGCTGTCTGTCAGTGTGTCCTCAGGCTACCAGGGAACATCGTCCCATTCCCTaGAGACCCTCCCCACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: SCITRLCCLSVCPQATREHRPIP*RPSPLS Trigger: GCTCAGTGGGGAGGGTCTTCAGGGAATGGGACGATG...TTCCCTGGTAGCCTGAGGACACACTGACAGACAGCATAGTCTGGTGATACAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR GCA 90 bp | CTGAGTGGTAGTAGGGGACACTCAACTTCACCCCTTAAAGTGCTCTTCTGTGTGGGGAAGGCCACAGAGTaGTGGGTGCAGGCAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LSGSRGHSTSPLKVLFCVGKATE*WVQAAL Trigger: GAGAGCTGCCTGCACCCAGCACTCTGTGGCCTTCCC...CACACAGAAGAGCACTTTAAGGGGTGAAGTTGAGTGTCCCCTACTACCACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR GCA 90 bp | GTGAAAAATTTCACAACACATCACCAGAGGGAGCATCATGCAGCGAGGACCCAAGCCGGACCCAGATTCTaGGGGTTCCCTTGCGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: VKNFTTHHQREHHAARTQAGPRF*GFPCAG Trigger: TCCGGCGCAAGGGAACCCGCAGAATCTGGGTCCGGC...TTGGGTCCTCGCTGCATGATGCTCCCTCTGGTGATGTGTTGTGAAATTTTTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR CCA 90 bp | TCCTGTATCACCAGACTATGCTGTCTGTCAGTGTGTCCTCAGGCTACCAGGGAAAAGGCCACAGAGTGCTaGGTGCAGGCAGCTCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SCITRLCCLSVCPQATREKATEC*VQAALR Trigger: CCTGAGAGCTGCCTGCACCCAGCACTCTGTGGCCTT...TTCCCTGGTAGCCTGAGGACACACTGACAGACAGCATAGTCTGGTGATACAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR GCA 90 bp | AATTTCACAACACATCACCAGAGGGAGCATCATGCAGCGAGGACCCAAAACAGGCCACAGAGTGCTGGGTaGAGGCAGCTCTCAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: NFTTHHQREHHAARTQNRPQSAG*RQLSGQ Trigger: CTGACCTGAGAGCTGCCTGCACCCAGCACTCTGTGG...CCTGTTTTGGGTCCTCGCTGCATGATGCTCCCTCTGGTGATGTGTTGTGAAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR CCA 90 bp | GGCATGAGAGAGAGCACCGGATCAGACCTCTCTTTGGAACCCAGCCACAGGGAAAGACTCTGTCCAGTGTaGTGTACACAGTGCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GMRESTGSDLSLEPSHRERLCPV*CTQCSG Trigger: TCCTGAGCACTGTGTACACCACACTGGACAGAGTCT...TTCCCTGTGGCTGGGTTCCAAAGAGAGGTCTGATCCGGTGCTCTCTCTCATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR TCA 90 bp | GGAAGTCTGGAGGAAACAGTTTCAAGTCATGAGAGGAAAGGACCAACAGCCCGAACAGTGCTCAGGAAGTaGGGCTTGCTCAGTTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GSLEETVSSHERKGPTARTVLRK*GLLSCR Trigger: CCGGCAACTGAGCAAGCCTCACTTCCTGAGCACTGT...TCGGGCTGTTGGTCCTTTCCTCTCATGACTTGAAACTGTTTCCTCCAGACTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR TCA 90 bp | GTGAAAAATTTCACAACACATCACCAGAGGGAGCATCATGCAGCGAGGACCCAAAGCTGGCTGAGGAGCTaGGAGGAAGAGTTGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: VKNFTTHHQREHHAARTQSWLRS*EEELEQ Trigger: CTGCTCCAACTCTTCCTCTCAGCTCCTCAGCCAGCT...TTGGGTCCTCGCTGCATGATGCTCCCTCTGGTGATGTGTTGTGAAATTTTTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR TCA 90 bp | GGAAGTCTGGAGGAAACAGTTTCAAGTCATGAGAGGAAAGGACCAACAGCCCGAGATTCTGCAGCTGGCTaGGGAGCTGAGAGGAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: GSLEETVSSHERKGPTARDSAAG*GAERKS Trigger: ACTCTTCCTCTCAGCTCCTCAGCCAGCTGCAGAATC...TCGGGCTGTTGGTCCTTTCCTCTCATGACTTGAAACTGTTTCCTCCAGACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR TCA 90 bp | TCCCTCCAAGTAATTGCTCACCAGCTTCTGAGACCTTTCAAGAGGACTGGTTCATGTTGTAGTGGACCGTaGGGCCCCAGAGTCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SLQVIAHQLLRPFKRTGSCCSGP*GPRVCL Trigger: CAGACAGACTCTGGGGCCTCACGGTCCACTACAACA...TGAACCAGTCCTCTTGAAAGGTCTCAGAAGCTGGTGAGCAATTACTTGGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR CCA 90 bp | GTAATTGCTCACCAGCTTCTGAGACCTTTCAAGAGGACTGGTTCAGCCTGTGAATGGAGCAGCCACGATTaGCCAGTGCCATGCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VIAHQLLRPFKRTGSACEWSSHD*PVPCSG Trigger: TCCTGAGCATGGCACTGGCCAATCGTGGCTGCTCCA...TTCACAGGCTGAACCAGTCCTCTTGAAAGGTCTCAGAAGCTGGTGAGCAATTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR CCA 90 bp | ATTTCACAACACATCACCAGAGGGAGCATCATGCAGCGAGGACCCAAAACAGGGGAGCCCATGAAGCGATaGTATCCCCAGAGAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: ISQHITRGSIMQRGPKTGEPMKR*YPQRKP Trigger: TGGCTTTCTCTGGGGATACCATCGCTTCATGGGCTC...CCCTGTTTTGGGTCCTCGCTGCATGATGCTCCCTCTGGTGATGTGTTGTGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR TCA 90 bp | CTGAGTGGTAGTAGGGGACACTCAACTTCACCCCTTAAAGTGCTCTTCTGTGTGATTCTGTGTTCCCCGTaGGGTTCGCCTGATTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LSGSRGHSTSPLKVLFCVILCSP*GSPDSA Trigger: TGCAGAATCAGGCGAACCTCACGGGGAACACAGAAT...CACACAGAAGAGCACTTTAAGGGGTGAAGTTGAGTGTCCCCTACTACCACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR GCA 90 bp | AAGGAGGAAGTCTGGAGGAAACAGTTTCAAGTCATGAGAGGAAAGGACCAACAGGCCACGATTGGCCAGTaGCATGCTCAGGATGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KEEVWRKQFQVMRGKDQQATIGQ*HAQDEE Trigger: CTCCTCATCCTGAGCATGGCACTGGCCAATCGTGGC...CTGTTGGTCCTTTCCTCTCATGACTTGAAACTGTTTCCTCCAGACTTCCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR CCA 90 bp | GTAATTGCTCACCAGCTTCTGAGACCTTTCAAGAGGACTGGTTCAGCCTGTGAAGCTGAGAGGAAGAGTTaGAGCAGCCACGATTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: VIAHQLLRPFKRTGSACEAERKS*SSHDWP Trigger: TGGCCAATCGTGGCTGCTCCAACTCTTCCTCTCAGC...TTCACAGGCTGAACCAGTCCTCTTGAAAGGTCTCAGAAGCTGGTGAGCAATTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR CCA 90 bp | CTGAGTGGTAGTAGGGGACACTCAACTTCACCCCTTAAAGTGCTCTTCTGTGTGGGCACTGTCCAGCTTTaGAAAAGCCGGAGTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: LSGSRGHSTSPLKVLFCVGTVQL*KSRSLQ Trigger: CTGAAGACTCCGGCTTTTCCAAAGCTGGACAGTGCC...CACACAGAAGAGCACTTTAAGGGGTGAAGTTGAGTGTCCCCTACTACCACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| 3UTR CAA 72 bp | ACTGGGAGATCTCCCATAAACACACCCCACAACCGTTaGCACCACAGGTTCCCATTTACAGAGACTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: TGRSPINTPHNR*HHRFPFTETLM Trigger: CATCAAAGTCTCTGTAAATGGGAACCTGTGGTGCAAACGGTTGTGGGGTGTGTTTATGGGAGATCTCCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR CCA 90 bp | ATTTCACAACACATCACCAGAGGGAGCATCATGCAGCGAGGACCCAAAACAGGGCTTAAAGCATCCAGTTaGTACAAGACTCTGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: ISQHITRGSIMQRGPKTGLKASS*YKTLSS Trigger: ACTGGACAGAGTCTTGTACCAACTGGATGCTTTAAG...CCCTGTTTTGGGTCCTCGCTGCATGATGCTCCCTCTGGTGATGTGTTGTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS GCA 90 bp | GTTGCCGGAGTGTGTCCTCACTGGGGAAGGCCACAGAGTGCTGGGTaGAGGCAGCTCTCAGGTCAGGTGTGTTCAGGTTTTGGAGGCGGA | + |
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Preference number: 5 (lower is better) Translates to: VAGVCPHWGRPQSAG*RQLSGQVCSGFGGG Trigger: TCCGCCTCCAAAACCTGAACACACCTGACCTGAGAGCTGCCTGCACCCAGCACTCTGTGGCCTTCCCCAGTGAGGACACACTCCGGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CCA 90 bp | TGCTCAGGAAGTGAGGCTTGCTCAGTTGCCGGAGTGTGTCCTCACTaGGGAAGGCCACAGAGTGCTGGGTGCAGGCAGCTCTCAGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: CSGSEACSVAGVCPH*GRPQSAGCRQLSGQ Trigger: CTGACCTGAGAGCTGCCTGCACCCAGCACTCTGTGGCCTTCCCCAGTGAGGACACACTCCGGCAACTGAGCAAGCCTCACTTCCTGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR CAA 90 bp | GGCATGAGAGAGAGCACCGGATCAGACCTCTCTTTGGAACCCAGCCACAGGGAAATTCTGCGGGTTCCCTaGCGCCGGACCCGGATTCTG | + |
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Preference number: 5 (lower is better) Translates to: GMRESTGSDLSLEPSHREILRVP*RRTRIL Trigger: CAGAATCCGGGTCCGGCGCAAGGGAACCCGCAGAAT...TTCCCTGTGGCTGGGTTCCAAAGAGAGGTCTGATCCGGTGCTCTCTCTCATGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS GCA 90 bp | TTGCTCAGTTGCCGGAGTGTGTCCTCACTGGGGAAGGCCACAGAGTaGTGGGTGCAGGCAGCTCTCAGGTCAGGTGTGTTCAGGTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: LLSCRSVSSLGKATE*WVQAALRSGVFRFW Trigger: CCAAAACCTGAACACACCTGACCTGAGAGCTGCCTGCACCCAGCACTCTGTGGCCTTCCCCAGTGAGGACACACTCCGGCAACTGAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR CAA 90 bp | TCCCTCCAAGTAATTGCTCACCAGCTTCTGAGACCTTTCAAGAGGACTGGTTCAATTCTGCGGGTTCCCTaGCGCCGGGCCCGGAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: SLQVIAHQLLRPFKRTGSILRVP*RRARSG Trigger: CCCGCTCCGGGCCCGGCGCAAGGGAACCCGCAGAAT...TGAACCAGTCCTCTTGAAAGGTCTCAGAAGCTGGTGAGCAATTACTTGGAGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CCA 90 bp | GAGGCCCCAGAGTCTGTCTGTGTGGGCTCAGGTATCTCCAGGGAGTaGTTGAGCAGCCGGGCCATGCAGAAAACATTGTTCCTTATGCCG | + |
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Preference number: 5 (lower is better) Translates to: EAPESVCVGSGISRE*LSSRAMQKTLFLMP Trigger: CGGCATAAGGAACAATGTTTTCTGCATGGCCCGGCTGCTCAACCACTCCCTGGAGATACCTGAGCCCACACAGACAGACTCTGGGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS TCA 90 bp | TGGTACAAGACTCTGTCCAGTGTGGTGTACACAGTGCTCAGGAAGTaGGGCTTGCTCAGTTGCCGGAGTGTGTCCTCACTGGGGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: WYKTLSSVVYTVLRK*GLLSCRSVSSLGKA Trigger: GGCCTTCCCCAGTGAGGACACACTCCGGCAACTGAGCAAGCCTCACTTCCTGAGCACTGTGTACACCACACTGGACAGAGTCTTGTACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS GCA 90 bp | GCTGAGGAGCTGAGAGGAAGAGTTGGAGCAGCCACGATTGGCCAGTaGCATGCTCAGGATGAGGAGACTGAGGGTCAAACTGAGCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: AEELRGRVGAATIGQ*HAQDEETEGQTEQC Trigger: ACACTGCTCAGTTTGACCCTCAGTCTCCTCATCCTGAGCATGGCACTGGCCAATCGTGGCTGCTCCAACTCTTCCTCTCAGCTCCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR CAA 90 bp | TCCTGTATCACCAGACTATGCTGTCTGTCAGTGTGTCCTCAGGCTACCAGGGAATTGGAGCAGCCACGATaGGCCAGTGCCATGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SCITRLCCLSVCPQATRELEQPR*ASAMLR Trigger: CCTGAGCATGGCACTGGCCAATCGTGGCTGCTCCAA...TTCCCTGGTAGCCTGAGGACACACTGACAGACAGCATAGTCTGGTGATACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS GCA 90 bp | AAGCATCCAGTTGGTACAAGACTCTGTCCAGTGTGGTGTACACAGTaGTCAGGAAGTGAGGCTTGCTCAGTTGCCGGAGTGTGTCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: KHPVGTRLCPVWCTQ*SGSEACSVAGVCPH Trigger: GTGAGGACACACTCCGGCAACTGAGCAAGCCTCACTTCCTGAGCACTGTGTACACCACACTGGACAGAGTCTTGTACCAACTGGATGCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS GCA 90 bp | AGCCGGGCCATGCAGAAAACATTGTTCCTTATGCCGAGGATATTGTaGCGGGCACTGTCCAGCTTTGGAAAAGCCGGAGTCTTCAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: SRAMQKTLFLMPRIL*RALSSFGKAGVFRN Trigger: ATTTCTGAAGACTCCGGCTTTTCCAAAGCTGGACAGTGCCCGGCACAATATCCTCGGCATAAGGAACAATGTTTTCTGCATGGCCCGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS-3UTR CAA 90 bp | TCCCTCCAAGTAATTGCTCACCAGCTTCTGAGACCTTTCAAGAGGACTGGTTCAGGGCACTGTCCAGCTTaGGAAAAGCCGGAGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SLQVIAHQLLRPFKRTGSGHCPA*EKPESS Trigger: TGAAGACTCCGGCTTTTCCAAAGCTGGACAGTGCCC...TGAACCAGTCCTCTTGAAAGGTCTCAGAAGCTGGTGAGCAATTACTTGGAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CCA 90 bp | GGAAAAGCCGGAGTCTTCAGAAATTTCTGTCTTAAAGCATCCAGTTaGTACAAGACTCTGTCCAGTGTGGTGTACACAGTGCTCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GKAGVFRNFCLKASS*YKTLSSVVYTVLRK Trigger: CTTCCTGAGCACTGTGTACACCACACTGGACAGAGTCTTGTACCAACTGGATGCTTTAAGACAGAAATTTCTGAAGACTCCGGCTTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CCA 72 bp | AGTGAGGCTTGCTCAGTTGCCGGAGTGTGTCCTCACTaGGGAAGGCCACAGAGTGCTGGGTGCAGGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SEACSVAGVCPH*GRPQSAGCRQL Trigger: GAGCTGCCTGCACCCAGCACTCTGTGGCCTTCCCCAGTGAGGACACACTCCGGCAACTGAGCAAGCCTCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CAA 90 bp | GTCCAGTGTGGTGTACACAGTGCTCAGGAAGTGAGGCTTGCTCAGTaGCCGGAGTGTGTCCTCACTGGGGAAGGCCACAGAGTGCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: VQCGVHSAQEVRLAQ*PECVLTGEGHRVLG Trigger: ACCCAGCACTCTGTGGCCTTCCCCAGTGAGGACACACTCCGGCAACTGAGCAAGCCTCACTTCCTGAGCACTGTGTACACCACACTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS GCA 72 bp | GTGTGTCCTCACTGGGGAAGGCCACAGAGTGCTGGGTaGAGGCAGCTCTCAGGTCAGGTGTGTTCAGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: VCPHWGRPQSAG*RQLSGQVCSGF Trigger: AAAACCTGAACACACCTGACCTGAGAGCTGCCTGCACCCAGCACTCTGTGGCCTTCCCCAGTGAGGACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CAA 72 bp | GGTGTACACAGTGCTCAGGAAGTGAGGCTTGCTCAGTaGCCGGAGTGTGTCCTCACTGGGGAAGGCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: GVHSAQEVRLAQ*PECVLTGEGHR Trigger: TCTGTGGCCTTCCCCAGTGAGGACACACTCCGGCAACTGAGCAAGCCTCACTTCCTGAGCACTGTGTACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CCA 72 bp | TCCCTGAAGACCCTCCCCACTGAGCCCATGAAGCGATaGTATCCCCAGAGAAAGCCACAGCTGCCTATCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLKTLPTEPMKR*YPQRKPQLPIL Trigger: CAAGATAGGCAGCTGTGGCTTTCTCTGGGGATACCATCGCTTCATGGGCTCAGTGGGGAGGGTCTTCAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS TCA 72 bp | ACTCTGTCCAGTGTGGTGTACACAGTGCTCAGGAAGTaGGGCTTGCTCAGTTGCCGGAGTGTGTCCTCACTG | + |
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Preference number: 6 (lower is better) Translates to: TLSSVVYTVLRK*GLLSCRSVSSL Trigger: CAGTGAGGACACACTCCGGCAACTGAGCAAGCCTCACTTCCTGAGCACTGTGTACACCACACTGGACAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS GCA 72 bp | CTGAGAGGAAGAGTTGGAGCAGCCACGATTGGCCAGTaGCATGCTCAGGATGAGGAGACTGAGGGTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: LRGRVGAATIGQ*HAQDEETEGQT Trigger: AGTTTGACCCTCAGTCTCCTCATCCTGAGCATGGCACTGGCCAATCGTGGCTGCTCCAACTCTTCCTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CAA 72 bp | AGGGAGTGGTTGAGCAGCCGGGCCATGCAGAAAACATaGTTCCTTATGCCGAGGATATTGTGCCGGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: REWLSSRAMQKT*FLMPRILCRAL Trigger: CAGTGCCCGGCACAATATCCTCGGCATAAGGAACAATGTTTTCTGCATGGCCCGGCTGCTCAACCACTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CAA 90 bp | GGTATCTCCAGGGAGTGGTTGAGCAGCCGGGCCATGCAGAAAACATaGTTCCTTATGCCGAGGATATTGTGCCGGGCACTGTCCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: GISREWLSSRAMQKT*FLMPRILCRALSSF Trigger: AAAGCTGGACAGTGCCCGGCACAATATCCTCGGCATAAGGAACAATGTTTTCTGCATGGCCCGGCTGCTCAACCACTCCCTGGAGATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CAA 90 bp | AGCAGCCGGGCCATGCAGAAAACATTGTTCCTTATGCCGAGGATATaGTGCCGGGCACTGTCCAGCTTTGGAAAAGCCGGAGTCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SSRAMQKTLFLMPRI*CRALSSFGKAGVFR Trigger: TCTGAAGACTCCGGCTTTTCCAAAGCTGGACAGTGCCCGGCACAATATCCTCGGCATAAGGAACAATGTTTTCTGCATGGCCCGGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CAA 90 bp | CCCATGAAGCGATGGTATCCCCAGAGAAAGCCACAGCTGCCTATCTaGGTATTAAAGACATCTGGTGTTGTAGTGGACCGTGAGGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: PMKRWYPQRKPQLPI*VLKTSGVVVDREAP Trigger: TGGGGCCTCACGGTCCACTACAACACCAGATGTCTTTAATACCAAGATAGGCAGCTGTGGCTTTCTCTGGGGATACCATCGCTTCATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CCA 72 bp | TTAAAGCATCCAGTTGGTACAAGACTCTGTCCAGTGTaGTGTACACAGTGCTCAGGAAGTGAGGCTTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LKHPVGTRLCPV*CTQCSGSEACS Trigger: TGAGCAAGCCTCACTTCCTGAGCACTGTGTACACCACACTGGACAGAGTCTTGTACCAACTGGATGCTTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CAA 72 bp | CGATGGTATCCCCAGAGAAAGCCACAGCTGCCTATCTaGGTATTAAAGACATCTGGTGTTGTAGTGGACCGT | + |
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Preference number: 6 (lower is better) Translates to: RWYPQRKPQLPI*VLKTSGVVVDR Trigger: ACGGTCCACTACAACACCAGATGTCTTTAATACCAAGATAGGCAGCTGTGGCTTTCTCTGGGGATACCATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CAA 90 bp | CATTGTTCCTTATGCCGAGGATATTGTGCCGGGCACTGTCCAGCTTaGGAAAAGCCGGAGTCTTCAGAAATTTCTGTCTTAAAGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: HCSLCRGYCAGHCPA*EKPESSEISVLKHP Trigger: TGGATGCTTTAAGACAGAAATTTCTGAAGACTCCGGCTTTTCCAAAGCTGGACAGTGCCCGGCACAATATCCTCGGCATAAGGAACAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CAA 72 bp | TTATGCCGAGGATATTGTGCCGGGCACTGTCCAGCTTaGGAAAAGCCGGAGTCTTCAGAAATTTCTGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: LCRGYCAGHCPA*EKPESSEISVL Trigger: TAAGACAGAAATTTCTGAAGACTCCGGCTTTTCCAAAGCTGGACAGTGCCCGGCACAATATCCTCGGCATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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| CDS CCA 72 bp | GGAGTCTTCAGAAATTTCTGTCTTAAAGCATCCAGTTaGTACAAGACTCTGTCCAGTGTGGTGTACACAGTG | + |
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Preference number: 6 (lower is better) Translates to: GVFRNFCLKASS*YKTLSSVVYTV Trigger: CACTGTGTACACCACACTGGACAGAGTCTTGTACCAACTGGATGCTTTAAGACAGAAATTTCTGAAGACTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075221.3 |
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