Pregenerated sensors for OSER1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035399Ensembl transcript IDs: ENSMUST00000046908.10, ENSMUST00000104954.9, ENSMUST00000127038.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTTTATTGCAAGCAGTGAGCAGAAAGAGATGTCTTCTCACAGAGTaGCCACCGGGTCTGCCGTTAACTAAACCTCTGATAACCTTTCAT | + |
|
Preference number: 1 (lower is better) Translates to: FLLQAVSRKRCLLTE*PPGLPLTKPLITFH Trigger: ATGAAAGGTTATCAGAGGTTTAGTTAACGGCAGACCCGGTGGCCACTCTGTGAGAAGACATCTCTTTCTGCTCACTGCTTGCAATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| 3UTR TCA 90 bp | ATGAGTCTCATAAGCTCTACTATTGATGGGCTGGCATCTACAGCATaGCAAGTGTTCAATTCAGTTACAAATGCACATTTGAGTTTCTTG | + |
|
Preference number: 1 (lower is better) Translates to: MSLISSTIDGLASTA*QVFNSVTNAHLSFL Trigger: CAAGAAACTCAAATGTGCATTTGTAACTGAATTGAACACTTGTCATGCTGTAGATGCCAGCCCATCAATAGTAGAGCTTATGAGACTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| 3UTR-3UTR CCA 90 bp | GGATGTCTCCATGTCCCCACCGCCGCCAGTCTCCAAGTCATTATGGTTTCTTCATGTCTTCTCACAGAGTaGCCACCGGGTCTGCCGTTA | + |
|
Preference number: 2 (lower is better) Translates to: GCLHVPTAASLQVIMVSSCLLTE*PPGLPL Trigger: TAACGGCAGACCCGGTGGCCACTCTGTGAGAAGACA...TGAAGAAACCATAATGACTTGGAGACTGGCGGCGGTGGGGACATGGAGACATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| 3UTR TCA 72 bp | ATAAGCTCTACTATTGATGGGCTGGCATCTACAGCATaGCAAGTGTTCAATTCAGTTACAAATGCACATTTG | + |
|
Preference number: 3 (lower is better) Translates to: ISSTIDGLASTA*QVFNSVTNAHL Trigger: CAAATGTGCATTTGTAACTGAATTGAACACTTGTCATGCTGTAGATGCCAGCCCATCAATAGTAGAGCTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CCA 90 bp | GGATGTCTCCATGTCCCCACCGCCGCCAGTCTCCAAGTCATTATGGTTTCTTCAGACCGTCTACGACGCTaGGTTCTCACTGCTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GCLHVPTAASLQVIMVSSDRLRR*VLTAPR Trigger: ACGAGGAGCAGTGAGAACCCAGCGTCGTAGACGGTC...TGAAGAAACCATAATGACTTGGAGACTGGCGGCGGTGGGGACATGGAGACATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CCA 90 bp | GGATGTCTCCATGTCCCCACCGCCGCCAGTCTCCAAGTCATTATGGTTTCTTCAACTGATGCCATCGGGTaGCTCAGTCTGGCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GCLHVPTAASLQVIMVSSTDAIG*LSLASV Trigger: CACAGAAGCCAGACTGAGCCACCCGATGGCATCAGT...TGAAGAAACCATAATGACTTGGAGACTGGCGGCGGTGGGGACATGGAGACATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | GGATGTCTCCATGTCCCCACCGCCGCCAGTCTCCAAGTCATTATGGTTTCTTCAAGAGTAGTCCTCAAGTaGTCTTCGTTCTGGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GCLHVPTAASLQVIMVSSRVVLK*SSFWGQ Trigger: CTGGCCCCAGAACGAAGATCACTTGAGGACTACTCT...TGAAGAAACCATAATGACTTGGAGACTGGCGGCGGTGGGGACATGGAGACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CCA 90 bp | GGATGTCTCCATGTCCCCACCGCCGCCAGTCTCCAAGTCATTATGGTTTCTTCACTTCTGTGCTTAAGCTaGCTGCTGGAAGGAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCLHVPTAASLQVIMVSSLLCLS*LLEGGA Trigger: AGCACCTCCTTCCAGCAGCCAGCTTAAGCACAGAAG...TGAAGAAACCATAATGACTTGGAGACTGGCGGCGGTGGGGACATGGAGACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CCA 90 bp | GGATGTCTCCATGTCCCCACCGCCGCCAGTCTCCAAGTCATTATGGTTTCTTCATGCCACCTCTTACACTaGCACTCCTTGCCTACACAC | + |
|
Preference number: 4 (lower is better) Translates to: GCLHVPTAASLQVIMVSSCHLLH*HSLPTH Trigger: GTGTGTAGGCAAGGAGTGCCAGTGTAAGAGGTGGCA...TGAAGAAACCATAATGACTTGGAGACTGGCGGCGGTGGGGACATGGAGACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGATGTCTTCTCACAGAGTGGCCACCGGGTCTGCCGTTAACTAAACCTAGCCAGACAGAGTTCTaGTGTGCAGTGACTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKRCLLTEWPPGLPLTKPSQTEF*CAVTES Trigger: ACTCTCAGTCACTGCACACCAGAACTCTGTCTGGCT...AGGTTTAGTTAACGGCAGACCCGGTGGCCACTCTGTGAGAAGACATCTCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | GGATGTCTCCATGTCCCCACCGCCGCCAGTCTCCAAGTCATTATGGTTTCTTCAGACATTCTGCAGACCTaGAAAGGAATACACTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GCLHVPTAASLQVIMVSSDILQT*KGIHFH Trigger: ATGGAAGTGTATTCCTTTTCAGGTCTGCAGAATGTC...TGAAGAAACCATAATGACTTGGAGACTGGCGGCGGTGGGGACATGGAGACATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | ACTGAGATGCCAAGAATAGTTTTTATTGCAAGCAGTGAGCAGAAAGAGATGTCTGGCTGCTGTTCTGGCTaGTGCTCTGACACTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TEMPRIVFIASSEQKEMSGCCSG*CSDTWA Trigger: GGCCCAAGTGTCAGAGCATCAGCCAGAACAGCAGCC...AGACATCTCTTTCTGCTCACTGCTTGCAATAAAAACTATTCTTGGCATCTCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | TTAATGACTCCCTCAAAACAAAATAGGACAGGCCACCTGAATCTAAACCTTAGAGGCTGCTGTTCTGGCTaGTGCTCTGACACTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LMTPSKQNRTGHLNLNLRGCCSG*CSDTWA Trigger: GGCCCAAGTGTCAGAGCATCAGCCAGAACAGCAGCC...TCTAAGGTTTAGATTCAGGTGGCCTGTCCTATTTTGTTTTGAGGGAGTCATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CCA 90 bp | CCACCGGGTCTGCCGTTAACTAAACCTCTGATAACCTTTCATTGGTTTAAAGCATGCCACCTCTTACACTaGCACTCCTTGCCTACACAC | + |
|
Preference number: 4 (lower is better) Translates to: PPGLPLTKPLITFHWFKACHLLH*HSLPTH Trigger: GTGTGTAGGCAAGGAGTGCCAGTGTAAGAGGTGGCA...TGCTTTAAACCAATGAAAGGTTATCAGAGGTTTAGTTAACGGCAGACCCGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGATGTCTTCTCACAGAGTGGCCACCGGGTCTGCCGTTAACTAAACCTCTGCTAGGTCCTCAATaGTCACATCATCCACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKRCLLTEWPPGLPLTKPLLGPQ*SHHPHR Trigger: TCTATGTGGATGATGTGACCATTGAGGACCTAGCAG...AGGTTTAGTTAACGGCAGACCCGGTGGCCACTCTGTGAGAAGACATCTCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | GGATGTCTCCATGTCCCCACCGCCGCCAGTCTCCAAGTCATTATGGTTTCTTCATTGTACTGCAATGTATaGATTTGGGAGGATGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GCLHVPTAASLQVIMVSSLYCNV*IWEDEE Trigger: TTCTTCATCCTCCCAAATTCATACATTGCAGTACAA...TGAAGAAACCATAATGACTTGGAGACTGGCGGCGGTGGGGACATGGAGACATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR GCA 90 bp | AGAAAGAGATGTCTTCTCACAGAGTGGCCACCGGGTCTGCCGTTAACTAAACCTAGTAGAGTTTTCTCCTaGGTTGAACTCTTTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKRCLLTEWPPGLPLTKPSRVFS*VELFGC Trigger: ACACCCAAAGAGTTCAACGCAGGAGAAAACTCTACT...AGGTTTAGTTAACGGCAGACCCGGTGGCCACTCTGTGAGAAGACATCTCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CCA 90 bp | TTAATGACTCCCTCAAAACAAAATAGGACAGGCCACCTGAATCTAAACCTTAGAGACCGTCTACGACGCTaGGTTCTCACTGCTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LMTPSKQNRTGHLNLNLRDRLRR*VLTAPR Trigger: ACGAGGAGCAGTGAGAACCCAGCGTCGTAGACGGTC...TCTAAGGTTTAGATTCAGGTGGCCTGTCCTATTTTGTTTTGAGGGAGTCATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | CCCTCAAAACAAAATAGGACAGGCCACCTGAATCTAAACCTTAGATATCTGACTTCTCACTGCTCCTCGTaGAGACTTCCTTGTAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: PSKQNRTGHLNLNLRYLTSHCSS*RLPCRP Trigger: GGGTCTACAAGGAAGTCTTCACGAGGAGCAGTGAGA...AGTCAGATATCTAAGGTTTAGATTCAGGTGGCCTGTCCTATTTTGTTTTGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | CCACCGGGTCTGCCGTTAACTAAACCTCTGATAACCTTTCATTGGTTTAAAGCATTCTGTTTTACTCTCTaGTGGGAGCCTCAGAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: PPGLPLTKPLITFHWFKAFCFTL*WEPQNR Trigger: TCGGTTCTGAGGCTCCCATCAGAGAGTAAAACAGAA...TGCTTTAAACCAATGAAAGGTTATCAGAGGTTTAGTTAACGGCAGACCCGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | CCACCGGGTCTGCCGTTAACTAAACCTCTGATAACCTTTCATTGGTTTAAAGCAACACATGGCTTGCCCTaGCTTAGCTTGGAAACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PPGLPLTKPLITFHWFKATHGLP*LSLETD Trigger: ATCTGTTTCCAAGCTAAGTCAGGGCAAGCCATGTGT...TGCTTTAAACCAATGAAAGGTTATCAGAGGTTTAGTTAACGGCAGACCCGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGATGTCTTCTCACAGAGTGGCCACCGGGTCTGCCGTTAACTAAACCTATCATCTCTGCCATGTaGGACATTTTCTTAGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: RKRCLLTEWPPGLPLTKPIISAM*DIFLGI Trigger: TATCCCTAAGAAAATGTCCCACATGGCAGAGATGAT...AGGTTTAGTTAACGGCAGACCCGGTGGCCACTCTGTGAGAAGACATCTCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | ACTGAGATGCCAAGAATAGTTTTTATTGCAAGCAGTGAGCAGAAAGAGATGTCTTCTCACTGCTCCTCGTaGAGACTTCCTTGTAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: TEMPRIVFIASSEQKEMSSHCSS*RLPCRP Trigger: GGGTCTACAAGGAAGTCTTCACGAGGAGCAGTGAGA...AGACATCTCTTTCTGCTCACTGCTTGCAATAAAAACTATTCTTGGCATCTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | TTAATGACTCCCTCAAAACAAAATAGGACAGGCCACCTGAATCTAAACCTTAGAAGAGTAGTCCTCAAGTaGTCTTCGTTCTGGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LMTPSKQNRTGHLNLNLRRVVLK*SSFWGQ Trigger: CTGGCCCCAGAACGAAGATCACTTGAGGACTACTCT...TCTAAGGTTTAGATTCAGGTGGCCTGTCCTATTTTGTTTTGAGGGAGTCATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCAAAACAAAATAGGACAGGCCACCTGAATCTAAACCTTAGATATCTGACTTCAGTCTGGCTTCTGTaGTTAAGCTGGCTGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSKQNRTGHLNLNLRYLTSVWLL*LSWLLE Trigger: TTCCAGCAGCCAGCTTAAGCACAGAAGCCAGACTGA...AGTCAGATATCTAAGGTTTAGATTCAGGTGGCCTGTCCTATTTTGTTTTGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | GGTCTGCCGTTAACTAAACCTCTGATAACCTTTCATTGGTTTAAAGCACATGAAAGTTCTGGTGTGCAGTaGCTGAGAGTAGTCCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLPLTKPLITFHWFKAHESSGVQ*LRVVLK Trigger: CTTGAGGACTACTCTCAGTCACTGCACACCAGAACT...TTCATGTGCTTTAAACCAATGAAAGGTTATCAGAGGTTTAGTTAACGGCAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR GCA 90 bp | ACTGAGATGCCAAGAATAGTTTTTATTGCAAGCAGTGAGCAGAAAGAGATGTCTTCAGTCTGGCTTCTGTaGTTAAGCTGGCTGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEMPRIVFIASSEQKEMSSVWLL*LSWLLE Trigger: TTCCAGCAGCCAGCTTAAGCACAGAAGCCAGACTGA...AGACATCTCTTTCTGCTCACTGCTTGCAATAAAAACTATTCTTGGCATCTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR GCA 90 bp | ACTGAGATGCCAAGAATAGTTTTTATTGCAAGCAGTGAGCAGAAAGAGATGTCTTACACTGGCACTCCTTaGCTACACACACACATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TEMPRIVFIASSEQKEMSYTGTP*LHTHMA Trigger: AGCCATGTGTGTGTGTAGGCAAGGAGTGCCAGTGTA...AGACATCTCTTTCTGCTCACTGCTTGCAATAAAAACTATTCTTGGCATCTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCAAAACAAAATAGGACAGGCCACCTGAATCTAAACCTTAGATATCTGACTTACACTTCCATGTCATaGCACCTCTTACACTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSKQNRTGHLNLNLRYLTYTSMS*HLLHWH Trigger: GTGCCAGTGTAAGAGGTGGCATGACATGGAAGTGTA...AGTCAGATATCTAAGGTTTAGATTCAGGTGGCCTGTCCTATTTTGTTTTGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCAAAACAAAATAGGACAGGCCACCTGAATCTAAACCTTAGATATCTGACTGCCGTAAGACTTTCTTaGGAGACTTGGGTAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PSKQNRTGHLNLNLRYLTAVRLS*ETWVAS Trigger: TGATGCTACCCAAGTCTCCCAAGAAAGTCTTACGGC...AGTCAGATATCTAAGGTTTAGATTCAGGTGGCCTGTCCTATTTTGTTTTGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTGCCGTTAACTAAACCTCTGATAACCTTTCATTGGTTTAAAGCACATGAAAGCCAGACAGAGTTCTaGTGTGCAGTGACTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLPLTKPLITFHWFKAHESQTEF*CAVTES Trigger: ACTCTCAGTCACTGCACACCAGAACTCTGTCTGGCT...TTCATGTGCTTTAAACCAATGAAAGGTTATCAGAGGTTTAGTTAACGGCAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | ACTGAGATGCCAAGAATAGTTTTTATTGCAAGCAGTGAGCAGAAAGAGATGTCTTTCTGTTTTACTCTCTaGTGGGAGCCTCAGAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: TEMPRIVFIASSEQKEMSFCFTL*WEPQNR Trigger: TCGGTTCTGAGGCTCCCATCAGAGAGTAAAACAGAA...AGACATCTCTTTCTGCTCACTGCTTGCAATAAAAACTATTCTTGGCATCTCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | GGTCTGCCGTTAACTAAACCTCTGATAACCTTTCATTGGTTTAAAGCACATGAAACACATGGCTTGCCCTaGCTTAGCTTGGAAACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLPLTKPLITFHWFKAHETHGLP*LSLETD Trigger: ATCTGTTTCCAAGCTAAGTCAGGGCAAGCCATGTGT...TTCATGTGCTTTAAACCAATGAAAGGTTATCAGAGGTTTAGTTAACGGCAGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | CTCCAAGTCATTATGGTTTCTTCAGCCCTCAGAACATTTTTAGGAGATTTTCTTAGTTCTGGTGTGCAGTaGCTGAGAGTAGTCCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQVIMVSSALRTFLGDFLSSGVQ*LRVVLK Trigger: CTTGAGGACTACTCTCAGTCACTGCACACCAGAACT...AAGAAAATCTCCTAAAAATGTTCTGAGGGCTGAAGAAACCATAATGACTTGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTGCCGTTAACTAAACCTCTGATAACCTTTCATTGGTTTAAAGCACATGAACTGCTAGGTCCTCAATaGTCACATCATCCACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLPLTKPLITFHWFKAHELLGPQ*SHHPHR Trigger: TCTATGTGGATGATGTGACCATTGAGGACCTAGCAG...TTCATGTGCTTTAAACCAATGAAAGGTTATCAGAGGTTTAGTTAACGGCAGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | TTAATGACTCCCTCAAAACAAAATAGGACAGGCCACCTGAATCTAAACCTTAGAAGTTTTCTCCTGCGTTaGACTCTTTGGGTGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LMTPSKQNRTGHLNLNLRSFLLR*TLWVLK Trigger: TTTCAACACCCAAAGAGTTCAACGCAGGAGAAAACT...TCTAAGGTTTAGATTCAGGTGGCCTGTCCTATTTTGTTTTGAGGGAGTCATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | TTAATGACTCCCTCAAAACAAAATAGGACAGGCCACCTGAATCTAAACCTTAGAGACATTCTGCAGACCTaGAAAGGAATACACTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LMTPSKQNRTGHLNLNLRDILQT*KGIHFH Trigger: ATGGAAGTGTATTCCTTTTCAGGTCTGCAGAATGTC...TCTAAGGTTTAGATTCAGGTGGCCTGTCCTATTTTGTTTTGAGGGAGTCATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR GCA 90 bp | TTAATGACTCCCTCAAAACAAAATAGGACAGGCCACCTGAATCTAAACCTTAGAAGTAGAGTTTTCTCCTaGGTTGAACTCTTTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LMTPSKQNRTGHLNLNLRSRVFS*VELFGC Trigger: ACACCCAAAGAGTTCAACGCAGGAGAAAACTCTACT...TCTAAGGTTTAGATTCAGGTGGCCTGTCCTATTTTGTTTTGAGGGAGTCATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR GCA 90 bp | ACTGAGATGCCAAGAATAGTTTTTATTGCAAGCAGTGAGCAGAAAGAGATGTCTGGTGTACATCATCTCTaGCATGTGGGACATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TEMPRIVFIASSEQKEMSGVHHL*HVGHFL Trigger: AAGAAAATGTCCCACATGGCAGAGATGATGTACACC...AGACATCTCTTTCTGCTCACTGCTTGCAATAAAAACTATTCTTGGCATCTCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR TCA 90 bp | CTCCAAGTCATTATGGTTTCTTCAGCCCTCAGAACATTTTTAGGAGATTTTCTTAGTTTTCTCCTGCGTTaGACTCTTTGGGTGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LQVIMVSSALRTFLGDFLSFLLR*TLWVLK Trigger: TTTCAACACCCAAAGAGTTCAACGCAGGAGAAAACT...AAGAAAATCTCCTAAAAATGTTCTGAGGGCTGAAGAAACCATAATGACTTGGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CCA 90 bp | TTAATGACTCCCTCAAAACAAAATAGGACAGGCCACCTGAATCTAAACCTTAGAATCATCTCTGCCATGTaGGACATTTTCTTAGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LMTPSKQNRTGHLNLNLRIISAM*DIFLGI Trigger: TATCCCTAAGAAAATGTCCCACATGGCAGAGATGAT...TCTAAGGTTTAGATTCAGGTGGCCTGTCCTATTTTGTTTTGAGGGAGTCATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS GCA 90 bp | ATTCCCCGTCCACTGATGCCATCGGGTGGCTCAGTCTGGCTTCTGTaGTTAAGCTGGCTGCTGGAAGGAGGTGCTGTTGTACTGCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: IPRPLMPSGGSVWLL*LSWLLEGGAVVLQC Trigger: ACATTGCAGTACAACAGCACCTCCTTCCAGCAGCCAGCTTAAGCACAGAAGCCAGACTGAGCCACCCGATGGCATCAGTGGACGGGGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS CCA 90 bp | GGTGTTGAAATTCCCCGTCCACTGATGCCATCGGGTGGCTCAGTCTaGCTTCTGTGCTTAAGCTGGCTGCTGGAAGGAGGTGCTGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GVEIPRPLMPSGGSV*LLCLSWLLEGGAVV Trigger: TACAACAGCACCTCCTTCCAGCAGCCAGCTTAAGCACAGAAGCCAGACTGAGCCACCCGATGGCATCAGTGGACGGGGAATTTCAACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS CCA 90 bp | CACGAGCTTGCTCGGAACAGGATCGAGGCGAGCCAGACAGAGTTCTaGTGTGCAGTGACTGAGAGTAGTCCTCAAGTGATCTTCGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HELARNRIEASQTEF*CAVTESSPQVIFVL Trigger: CAGAACGAAGATCACTTGAGGACTACTCTCAGTCACTGCACACCAGAACTCTGTCTGGCTCGCCTCGATCCTGTTCCGAGCAAGCTCGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS TCA 90 bp | TTGGGAGACTTGGGTAGCATCAGAGAGCTCTTCTGTTTTACTCTCTaGTGGGAGCCTCAGAACCGAGCTTCTCAGAGGCTCGATGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGDLGSIRELFCFTL*WEPQNRASQRLDGC Trigger: GCAGCCATCGAGCCTCTGAGAAGCTCGGTTCTGAGGCTCCCATCAGAGAGTAAAACAGAAGAGCTCTCTGATGCTACCCAAGTCTCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS CCA 90 bp | CCACTGATGCCATCGGGTGGCTCAGTCTGGCTTCTGTGCTTAAGCTaGCTGCTGGAAGGAGGTGCTGTTGTACTGCAATGTATGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLMPSGGSVWLLCLS*LLEGGAVVLQCMNL Trigger: CAAATTCATACATTGCAGTACAACAGCACCTCCTTCCAGCAGCCAGCTTAAGCACAGAAGCCAGACTGAGCCACCCGATGGCATCAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS GCA 90 bp | GGAGGGACATTCTGCAGACCTGAAAAGGAATACACTTCCATGTCATaGCACCTCTTACACTGGCACTCCTTGCCTACACACACACATGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGTFCRPEKEYTSMS*HLLHWHSLPTHTHG Trigger: GCCATGTGTGTGTGTAGGCAAGGAGTGCCAGTGTAAGAGGTGGCATGACATGGAAGTGTATTCCTTTTCAGGTCTGCAGAATGTCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS TCA 90 bp | ATCAAGAGAAGTAGAGTTTTCTCCTGCGTTGAACTCTTTGGGTGTTaGAATTCCCCGTCCACTGATGCCATCGGGTGGCTCAGTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IKRSRVFSCVELFGC*NSPSTDAIGWLSLA Trigger: AGCCAGACTGAGCCACCCGATGGCATCAGTGGACGGGGAATTTCAACACCCAAAGAGTTCAACGCAGGAGAAAACTCTACTTCTCTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS GCA 90 bp | GCCACCTCTTACACTGGCACTCCTTGCCTACACACACACATGGCTTaGCCTGACTTAGCTTGGAAACAGATTGAAAGTCAGAGAGATCGT | + |
|
Preference number: 5 (lower is better) Translates to: ATSYTGTPCLHTHMA*PDLAWKQIESQRDR Trigger: ACGATCTCTCTGACTTTCAATCTGTTTCCAAGCTAAGTCAGGGCAAGCCATGTGTGTGTGTAGGCAAGGAGTGCCAGTGTAAGAGGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAGATGTCTTCTCACAGAGTGGCCACCGGGTCTGCCGTTAACTAAACCTACTTTCTTGGGAGACTaGGGTAGCATCAGAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RKRCLLTEWPPGLPLTKPTFLGD*GSIREL Trigger: GAGCTCTCTGATGCTACCCAAGTCTCCCAAGAAAGT...AGGTTTAGTTAACGGCAGACCCGGTGGCCACTCTGTGAGAAGACATCTCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS TCA 90 bp | TGCACACATGGTTTTCGGTTTGGTATCATCGGCTGCTGTTCTGGCTaGTGCTCTGACACTTGGGCCTTCTCCAACAGACAGAGATATGAT | + |
|
Preference number: 5 (lower is better) Translates to: CTHGFRFGIIGCCSG*CSDTWAFSNRQRYD Trigger: ATCATATCTCTGTCTGTTGGAGAAGGCCCAAGTGTCAGAGCATCAGCCAGAACAGCAGCCGATGATACCAAACCGAAAACCATGTGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 ENSMUST00000127038.2 |
||
| CDS TCA 90 bp | AGCCTCAGAACCGAGCTTCTCAGAGGCTCGATGGCTGCTCCTGTGTaGTTAACATCAAGAGAAGTAGAGTTTTCTCCTGCGTTGAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLRTELLRGSMAAPV*LTSREVEFSPALNS Trigger: AGAGTTCAACGCAGGAGAAAACTCTACTTCTCTTGATGTTAATCACACAGGAGCAGCCATCGAGCCTCTGAGAAGCTCGGTTCTGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CAA 90 bp | CCACCGGGTCTGCCGTTAACTAAACCTCTGATAACCTTTCATTGGTTTAAAGCACCTGCGTTGAACTCTTaGGGTGTTGAAATTCCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PPGLPLTKPLITFHWFKAPALNS*GVEIPR Trigger: ACGGGGAATTTCAACACCCAAAGAGTTCAACGCAGG...TGCTTTAAACCAATGAAAGGTTATCAGAGGTTTAGTTAACGGCAGACCCGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CAA 90 bp | CCACCGGGTCTGCCGTTAACTAAACCTCTGATAACCTTTCATTGGTTTAAAGCAAGCCGTAAGACTTTCTaGGGAGACTTGGGTAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: PPGLPLTKPLITFHWFKASRKTF*GDLGSI Trigger: GATGCTACCCAAGTCTCCCAAGAAAGTCTTACGGCT...TGCTTTAAACCAATGAAAGGTTATCAGAGGTTTAGTTAACGGCAGACCCGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CAA 90 bp | GGTCTGCCGTTAACTAAACCTCTGATAACCTTTCATTGGTTTAAAGCACATGAACACATAGACACGAGCTaGCTCGGAACAGGATCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLPLTKPLITFHWFKAHEHIDTS*LGTGSR Trigger: CCTCGATCCTGTTCCGAGCAAGCTCGTGTCTATGTG...TTCATGTGCTTTAAACCAATGAAAGGTTATCAGAGGTTTAGTTAACGGCAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCAAAACAAAATAGGACAGGCCACCTGAATCTAAACCTTAGATATCTGACTCCTGCGTTGAACTCTTaGGGTGTTGAAATTCCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PSKQNRTGHLNLNLRYLTPALNS*GVEIPR Trigger: ACGGGGAATTTCAACACCCAAAGAGTTCAACGCAGG...AGTCAGATATCTAAGGTTTAGATTCAGGTGGCCTGTCCTATTTTGTTTTGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CAA 90 bp | CTCCAAGTCATTATGGTTTCTTCAGCCCTCAGAACATTTTTAGGAGATTTTCTTCACATAGACACGAGCTaGCTCGGAACAGGATCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQVIMVSSALRTFLGDFLHIDTS*LGTGSR Trigger: CCTCGATCCTGTTCCGAGCAAGCTCGTGTCTATGTG...AAGAAAATCTCCTAAAAATGTTCTGAGGGCTGAAGAAACCATAATGACTTGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CAA 90 bp | ACTGAGATGCCAAGAATAGTTTTTATTGCAAGCAGTGAGCAGAAAGAGATGTCTAGCCGTAAGACTTTCTaGGGAGACTTGGGTAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TEMPRIVFIASSEQKEMSSRKTF*GDLGSI Trigger: GATGCTACCCAAGTCTCCCAAGAAAGTCTTACGGCT...AGACATCTCTTTCTGCTCACTGCTTGCAATAAAAACTATTCTTGGCATCTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CAA 90 bp | CCACCGGGTCTGCCGTTAACTAAACCTCTGATAACCTTTCATTGGTTTAAAGCATCCACTCTTAATTTCTaGAAGGCAGTTTGCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: PPGLPLTKPLITFHWFKASTLNF*KAVCRL Trigger: AAGTCTGCAAACTGCCTTCAAGAAATTAAGAGTGGA...TGCTTTAAACCAATGAAAGGTTATCAGAGGTTTAGTTAACGGCAGACCCGGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS-3UTR CAA 90 bp | CTCCAAGTCATTATGGTTTCTTCAGCCCTCAGAACATTTTTAGGAGATTTTCTTTCCACTCTTAATTTCTaGAAGGCAGTTTGCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: LQVIMVSSALRTFLGDFLSTLNF*KAVCRL Trigger: AAGTCTGCAAACTGCCTTCAAGAAATTAAGAGTGGA...AAGAAAATCTCCTAAAAATGTTCTGAGGGCTGAAGAAACCATAATGACTTGGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS GCA 72 bp | CCACTGATGCCATCGGGTGGCTCAGTCTGGCTTCTGTaGTTAAGCTGGCTGCTGGAAGGAGGTGCTGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PLMPSGGSVWLL*LSWLLEGGAVV Trigger: TACAACAGCACCTCCTTCCAGCAGCCAGCTTAAGCACAGAAGCCAGACTGAGCCACCCGATGGCATCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS CCA 72 bp | GCTCGGAACAGGATCGAGGCGAGCCAGACAGAGTTCTaGTGTGCAGTGACTGAGAGTAGTCCTCAAGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: ARNRIEASQTEF*CAVTESSPQVI Trigger: GATCACTTGAGGACTACTCTCAGTCACTGCACACCAGAACTCTGTCTGGCTCGCCTCGATCCTGTTCCGAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS CAA 72 bp | GTCCTCAATGGTCACATCATCCACATAGACACGAGCTaGCTCGGAACAGGATCGAGGCGAGCCAGACAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VLNGHIIHIDTS*LGTGSRRARQS Trigger: ACTCTGTCTGGCTCGCCTCGATCCTGTTCCGAGCAAGCTCGTGTCTATGTGGATGATGTGACCATTGAGGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS TCA 72 bp | GGTTTTCGGTTTGGTATCATCGGCTGCTGTTCTGGCTaGTGCTCTGACACTTGGGCCTTCTCCAACAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: GFRFGIIGCCSG*CSDTWAFSNRQ Trigger: CTGTCTGTTGGAGAAGGCCCAAGTGTCAGAGCATCAGCCAGAACAGCAGCCGATGATACCAAACCGAAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 ENSMUST00000127038.2 |
||
| CDS TCA 72 bp | AGACCGTCTACGACGCTGGGTTCTCACTGCTCCTCGTaGAGACTTCCTTGTAGACCCATGCCAACTGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RPSTTLGSHCSS*RLPCRPMPTVF Trigger: AAAGACAGTTGGCATGGGTCTACAAGGAAGTCTTCACGAGGAGCAGTGAGAACCCAGCGTCGTAGACGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS TCA 72 bp | TTGGGTAGCATCAGAGAGCTCTTCTGTTTTACTCTCTaGTGGGAGCCTCAGAACCGAGCTTCTCAGAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LGSIRELFCFTL*WEPQNRASQRL Trigger: GAGCCTCTGAGAAGCTCGGTTCTGAGGCTCCCATCAGAGAGTAAAACAGAAGAGCTCTCTGATGCTACCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS CAA 90 bp | GTAGACCCATGCCAACTGTCTTTAGATGCACACATGGTTTTCGGTTaGGTATCATCGGCTGCTGTTCTGGCTGATGCTCTGACACTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VDPCQLSLDAHMVFG*VSSAAVLADALTLG Trigger: CCCAAGTGTCAGAGCATCAGCCAGAACAGCAGCCGATGATACCAAACCGAAAACCATGTGTGCATCTAAAGACAGTTGGCATGGGTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 ENSMUST00000127038.2 |
||
| CDS TCA 72 bp | ACCGAGCTTCTCAGAGGCTCGATGGCTGCTCCTGTGTaGTTAACATCAAGAGAAGTAGAGTTTTCTCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: TELLRGSMAAPV*LTSREVEFSPA Trigger: CGCAGGAGAAAACTCTACTTCTCTTGATGTTAATCACACAGGAGCAGCCATCGAGCCTCTGAGAAGCTCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS GCA 72 bp | GAGCCTCAGAACCGAGCTTCTCAGAGGCTCGATGGCTaGTCCTGTGTGATTAACATCAAGAGAAGTAGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: EPQNRASQRLDG*SCVINIKRSRV Trigger: AACTCTACTTCTCTTGATGTTAATCACACAGGAGCAGCCATCGAGCCTCTGAGAAGCTCGGTTCTGAGGCTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS GCA 72 bp | TACACTGGCACTCCTTGCCTACACACACACATGGCTTaGCCTGACTTAGCTTGGAAACAGATTGAAAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: YTGTPCLHTHMA*PDLAWKQIESQ Trigger: CTGACTTTCAATCTGTTTCCAAGCTAAGTCAGGGCAAGCCATGTGTGTGTGTAGGCAAGGAGTGCCAGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS CAA 90 bp | ACAGACAGAGATATGATGGACCCTGATGCGTCCACTCTTAATTTCTaGAAGGCAGTTTGCAGACTTTCCTCCTCTCCATCCTTGGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: TDRDMMDPDASTLNF*KAVCRLSSSPSLAS Trigger: CGAAGCCAAGGATGGAGAGGAGGAAAGTCTGCAAACTGCCTTCAAGAAATTAAGAGTGGACGCATCAGGGTCCATCATATCTCTGTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 ENSMUST00000127038.2 |
||
| CDS GCA 72 bp | AGACTTCCTTGTAGACCCATGCCAACTGTCTTTAGATaGACACATGGTTTTCGGTTTGGTATCATCGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RLPCRPMPTVFR*THGFRFGIIGC Trigger: GCAGCCGATGATACCAAACCGAAAACCATGTGTGCATCTAAAGACAGTTGGCATGGGTCTACAAGGAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 ENSMUST00000127038.2 |
||
| CDS CAA 72 bp | GATATGATGGACCCTGATGCGTCCACTCTTAATTTCTaGAAGGCAGTTTGCAGACTTTCCTCCTCTCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: DMMDPDASTLNF*KAVCRLSSSPS Trigger: GGATGGAGAGGAGGAAAGTCTGCAAACTGCCTTCAAGAAATTAAGAGTGGACGCATCAGGGTCCATCATATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 ENSMUST00000127038.2 |
||
| CDS CAA 72 bp | TCAAGAGAAGTAGAGTTTTCTCCTGCGTTGAACTCTTaGGGTGTTGAAATTCCCCGTCCACTGATGCCATCG | + |
|
Preference number: 6 (lower is better) Translates to: SREVEFSPALNS*GVEIPRPLMPS Trigger: CGATGGCATCAGTGGACGGGGAATTTCAACACCCAAAGAGTTCAACGCAGGAGAAAACTCTACTTCTCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS CCA 72 bp | GAGAGATCGTTAGCCGTAAGACTTTCTTGGGAGACTTaGGTAGCATCAGAGAGCTCTTCTGTTTTACTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ERSLAVRLSWET*VASESSSVLLS Trigger: AGAGAGTAAAACAGAAGAGCTCTCTGATGCTACCCAAGTCTCCCAAGAAAGTCTTACGGCTAACGATCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS CAA 72 bp | AGAGAGATCGTTAGCCGTAAGACTTTCTTGGGAGACTaGGGTAGCATCAGAGAGCTCTTCTGTTTTACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: REIVSRKTFLGD*GSIRELFCFTL Trigger: GAGAGTAAAACAGAAGAGCTCTCTGATGCTACCCAAGTCTCCCAAGAAAGTCTTACGGCTAACGATCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||
| CDS CAA 72 bp | TTGAAAGTCAGAGAGATCGTTAGCCGTAAGACTTTCTaGGGAGACTTGGGTAGCATCAGAGAGCTCTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LKVREIVSRKTF*GDLGSIRELFC Trigger: ACAGAAGAGCTCTCTGATGCTACCCAAGTCTCCCAAGAAAGTCTTACGGCTAACGATCTCTCTGACTTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046908.10 ENSMUST00000104954.9 |
||