Pregenerated sensors for OSCP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042616Ensembl transcript IDs: ENSMUST00000035497.5, ENSMUST00000143712.3
Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCCTGGGCCTCTCAAGCCTGTCTTGTCCTTGCCTGGGTTACCCTaGCTCTCGGAGGTGACGACGCCCAATGTGTTAGGGGAGAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: LPGPLKPVLSLPGLP*LSEVTTPNVLGERV Trigger: AACCCTCTCCCCTAACACATTGGGCGTCGTCACCTCCGAGAGGCAGGGTAACCCAGGCAAGGACAAGACAGGCTTGAGAGGCCCAGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR CCA 90 bp | TCAGATAGTTCGCATCTCTGCAGGGCGAGTGGAGGGAGGAGGCCGTaGTTTCTGGGCAAGGGTGGCCCATCTCCTAGATCCAGTCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: SDSSHLCRASGGRRP*FLGKGGPSPRSSPR Trigger: TCTGGGACTGGATCTAGGAGATGGGCCACCCTTGCCCAGAAACCACGGCCTCCTCCCTCCACTCGCCCTGCAGAGATGCGAACTATCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR TCA 90 bp | GTAGGACAGGCCTCCTGGCCTTTTCTGAACTATCTCAGGCAGCCCTaGCCTGAGGCAGTTCATGTGAGTCCCTGGGGGAGGCACATCACA | + |
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Preference number: 1 (lower is better) Translates to: VGQASWPFLNYLRQP*PEAVHVSPWGRHIT Trigger: TGTGATGTGCCTCCCCCAGGGACTCACATGAACTGCCTCAGGTCAGGGCTGCCTGAGATAGTTCAGAAAAGGCCAGGAGGCCTGTCCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR GCA 90 bp | CCAGAGAACCTGGAGGCAGAAGCTGATGCAGAGGCTGTGGTGGGGTaGTGCTTCCTGTCCTGCTCTTATAAAACCCAAGACCACCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: PENLEAEADAEAVVG*CFLSCSYKTQDHQP Trigger: GGGCTGGTGGTCTTGGGTTTTATAAGAGCAGGACAGGAAGCAGCACCCCACCACAGCCTCTGCATCAGCTTCTGCCTCCAGGTTCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR GCA 90 bp | TGGCCTCGAACTCAGAGATCCTCAGGCCTCAGGCCTCATGGCCTCTaGATCCTGAGTACTGGGATTAAAGGTGTATGGCCCTCTGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: WPRTQRSSGLRPHGL*ILSTGIKGVWPSAQ Trigger: CTGGGCAGAGGGCCATACACCTTTAATCCCAGTACTCAGGATGCAGAGGCCATGAGGCCTGAGGCCTGAGGATCTCTGAGTTCGAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR TCA 90 bp | ACAGGCCTCCTGGCCTTTTCTGAACTATCTCAGGCAGCCCTGACCTaGGGCAGTTCATGTGAGTCCCTGGGGGAGGCACATCACATACAC | + |
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Preference number: 1 (lower is better) Translates to: TGLLAFSELSQAALT*GSSCESLGEAHHIH Trigger: GTGTATGTGATGTGCCTCCCCCAGGGACTCACATGAACTGCCTCAGGTCAGGGCTGCCTGAGATAGTTCAGAAAAGGCCAGGAGGCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR GCA 90 bp | CTCGGAGGAGAACATGCTTGGAAGAACAAACATCTGACCCCCAGGTaGTCTCCCTGGGCCTCTCAAGCCTGTCTTGTCCTTGCCTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: LGGEHAWKNKHLTPR*SPWASQACLVLAWV Trigger: AACCCAGGCAAGGACAAGACAGGCTTGAGAGGCCCAGGGAGAGCACCTGGGGGTCAGATGTTTGTTCTTCCAAGCATGTTCTCCTCCGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR CCA 90 bp | CAGAGCCAGAGAACCTGGAGGCAGAAGCTGATGCAGAGGCTGTGGTaGGGTGCTGCTTCCTGTCCTGCTCTTATAAAACCCAAGACCACC | + |
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Preference number: 1 (lower is better) Translates to: QSQRTWRQKLMQRLW*GAASCPALIKPKTT Trigger: GGTGGTCTTGGGTTTTATAAGAGCAGGACAGGAAGCAGCACCCCACCACAGCCTCTGCATCAGCTTCTGCCTCCAGGTTCTCTGGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR CCA 90 bp | GAACATGCTTGGAAGAACAAACATCTGACCCCCAGGTGCTCTCCCTaGGCCTCTCAAGCCTGTCTTGTCCTTGCCTGGGTTACCCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: EHAWKNKHLTPRCSP*ASQACLVLAWVTLP Trigger: AGGCAGGGTAACCCAGGCAAGGACAAGACAGGCTTGAGAGGCCCAGGGAGAGCACCTGGGGGTCAGATGTTTGTTCTTCCAAGCATGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR TCA 90 bp | ATAAAGGTAGACTCGGAGGAGAACATGCTTGGAAGAACAAACATCTaGCCCCCAGGTGCTCTCCCTGGGCCTCTCAAGCCTGTCTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: IKVDSEENMLGRTNI*PPGALPGPLKPVLS Trigger: GGACAAGACAGGCTTGAGAGGCCCAGGGAGAGCACCTGGGGGTCAGATGTTTGTTCTTCCAAGCATGTTCTCCTCCGAGTCTACCTTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR CCA 90 bp | CTGTTCATCATCAAAAGACAGGAACTCAAACAGAGCCAGAGAACCTaGAGGCAGAAGCTGATGCAGAGGCTGTGGTGGGGTGCTGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: LFIIKRQELKQSQRT*RQKLMQRLWWGAAS Trigger: GGAAGCAGCACCCCACCACAGCCTCTGCATCAGCTTCTGCCTCCAGGTTCTCTGGCTCTGTTTGAGTTCCTGTCTTTTGATGATGAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR CCA 90 bp | AGGCTGATCTCAAACTTGAGTTGGTTCCTGAGGCTCTGGTTTCTGTaGCTATACTGCAATCCTCAGGTGAGCTGGCCTGCAAGGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: RLISNLSWFLRLWFL*LYCNPQVSWPARFQ Trigger: CTGGAACCTTGCAGGCCAGCTCACCTGAGGATTGCAGTATAGCCACAGAAACCAGAGCCTCAGGAACCAACTCAAGTTTGAGATCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR TCA 90 bp | CTGTGCCATTCAGATATTTCTCTCATAGGAATGGACTCTGACCTCTaGCAGTTGGCTGGCCCTGAGGGTACACAAGGTTACTGGTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: LCHSDISLIGMDSDL*QLAGPEGTQGYWSQ Trigger: CTGGGACCAGTAACCTTGTGTACCCTCAGGGCCAGCCAACTGTCAGAGGTCAGAGTCCATTCCTATGAGAGAAATATCTGAATGGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR GCA 90 bp | TCAAACTTGAGTTGGTTCCTGAGGCTCTGGTTTCTGTGGCTATACTaGAATCCTCAGGTGAGCTGGCCTGCAAGGTTCCAGACAGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: SNLSWFLRLWFLWLY*NPQVSWPARFQTVF Trigger: GAAAACTGTCTGGAACCTTGCAGGCCAGCTCACCTGAGGATTGCAGTATAGCCACAGAAACCAGAGCCTCAGGAACCAACTCAAGTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR GCA 90 bp | GCTCTGGTTTCTGTGGCTATACTGCAATCCTCAGGTGAGCTGGCCTaGAAGGTTCCAGACAGTTTTCCTTTCAGTAGAAGTGCTAAGATT | + |
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Preference number: 1 (lower is better) Translates to: ALVSVAILQSSGELA*KVPDSFPFSRSAKI Trigger: AATCTTAGCACTTCTACTGAAAGGAAAACTGTCTGGAACCTTGCAGGCCAGCTCACCTGAGGATTGCAGTATAGCCACAGAAACCAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR CCA 90 bp | TGTGTGTGTAGTAAGTGTGGATACGTGTGTGCCATAGCACATATGTaGAAGGTGTTCTTGAGACAGGAGACAGGATCACTGGTTTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: CVCSKCGYVCAIAHM*KVFLRQETGSLVCW Trigger: CCAGCAAACCAGTGATCCTGTCTCCTGTCTCAAGAACACCTTCCACATATGTGCTATGGCACACACGTATCCACACTTACTACACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR GCA 90 bp | GTGGTTAAGAGCACTGATTGCTCTTCCAGAGGCCCAGCCAGTGTATaGCCCATTTCCTGTCTTAATGAATTGCCTCAAAACAAACAAGAG | + |
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Preference number: 1 (lower is better) Translates to: VVKSTDCSSRGPASV*PISCLNELPQNKQE Trigger: CTCTTGTTTGTTTTGAGGCAATTCATTAAGACAGGAAATGGGGCATACACTGGCTGGGCCTCTGGAAGAGCAATCAGTGCTCTTAACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR CCA 90 bp | CCCTCAATTGTGCAGTTGTTGAACTTTGTGGCAATTTCAAAAGGTTaGACATACCTGGTGGTTAAGGGATTTCTTCGATGGGTGAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: PSIVQLLNFVAISKG*TYLVVKGFLRWVRD Trigger: ATCTCTCACCCATCGAAGAAATCCCTTAACCACCAGGTATGTCCAACCTTTTGAAATTGCCACAAAGTTCAACAACTGCACAATTGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR GCA 90 bp | CCAGACAGTTTTCCTTTCAGTAGAAGTGCTAAGATTACGGATGTGTaGTCATCACTTTGCCACAACACTTTATTCATGTATGTATCTATG | + |
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Preference number: 1 (lower is better) Translates to: PDSFPFSRSAKITDV*SSLCHNTLFMYVSM Trigger: CATAGATACATACATGAATAAAGTGTTGTGGCAAAGTGATGAGCACACATCCGTAATCTTAGCACTTCTACTGAAAGGAAAACTGTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR GCA 90 bp | TTTTCTCAATATTTGTGCAGGCCTAGAAGCATGAAACTCAGAGATTaGTTCATCAGCACAGATGTGTATCTCTTGTTTATTTACAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: FSQYLCRPRSMKLRD*FISTDVYLLFIYRG Trigger: TCCTCTGTAAATAAACAAGAGATACACATCTGTGCTGATGAAGCAATCTCTGAGTTTCATGCTTCTAGGCCTGCACAAATATTGAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR GCA 90 bp | TGTGCTCATCACTTTGCCACAACACTTTATTCATGTATGTATCTATaGATTTTATGTATGAATCCACTGTCTGAATGTATGCCTGAATGC | + |
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Preference number: 1 (lower is better) Translates to: CAHHFATTLYSCMYL*ILCMNPLSECMPEC Trigger: GCATTCAGGCATACATTCAGACAGTGGATTCATACATAAAATGCATAGATACATACATGAATAAAGTGTTGTGGCAAAGTGATGAGCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR GCA 90 bp | CCTTTCAGTAGAAGTGCTAAGATTACGGATGTGTGCTCATCACTTTaGCACAACACTTTATTCATGTATGTATCTATGCATTTTATGTAT | + |
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Preference number: 1 (lower is better) Translates to: PFSRSAKITDVCSSL*HNTLFMYVSMHFMY Trigger: ATACATAAAATGCATAGATACATACATGAATAAAGTGTTGTGGCAAAGTGATGAGCACACATCCGTAATCTTAGCACTTCTACTGAAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR CAA 90 bp | CCGTTACAGCCAGGCGGTGGCGGCGCACGCCTTAATCCTAGCCCTTaGGGAGGCAGAAGCAGGTGGATCTCTGAGTTTGAGGCTAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: PLQPGGGGARLNPSP*GGRSRWISEFEASL Trigger: CAGGCTAGCCTCAAACTCAGAGATCCACCTGCTTCTGCCTCCCAAAGGGCTAGGATTAAGGCGTGCGCCGCCACCGCCTGGCTGTAACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGAACAAACATCTGACCCCCAGGTGCTCTCCCTGGGCCTCTCAAGCCTGTTGGCCCCACCCACAATaGGCTGGGCCCTCCCCATCA | + |
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Preference number: 2 (lower is better) Translates to: WKNKHLTPRCSPWASQACWPHPQ*AGPSPS Trigger: TGATGGGGAGGGCCCAGCCCATTGTGGGTGGGGCCA...ACAGGCTTGAGAGGCCCAGGGAGAGCACCTGGGGGTCAGATGTTTGTTCTTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR GCA 90 bp | GTACTTGAGAGGCAGAAGCAGGCGGATCACTGTGAGTTCCAGGCCAGCATGGTCAGCCTGTCTTGTCCTTaGCTGGGTTACCCTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: VLERQKQADHCEFQASMVSLSCP*LGYPAS Trigger: AGAGGCAGGGTAACCCAGGCAAGGACAAGACAGGCT...GACCATGCTGGCCTGGAACTCACAGTGATCCGCCTGCTTCTGCCTCTCAAGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR CAA 90 bp | CAGAATGGCCTGGATCCCCCTCCTGTGTTTTCAGGTGTTGCTCTTTaGTCCTTACAGGCACGCATAGGACGCTGGTCCCTGCAGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: QNGLDPPPVFSGVAL*SLQARIGRWSLQER Trigger: TCTTTCCTGCAGGGACCAGCGTCCTATGCGTGCCTGTAAGGACAAAAGAGCAACACCTGAAAACACAGGAGGGGGATCCAGGCCATTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR CCA 90 bp | GTACACAAGGTTACTGGTCCCAGGAGGGAGCATGTAGGACAGGCCTCCTGGCCTAGGCTCTGGTTTCTGTaGCTATACTGCAATCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: VHKVTGPRREHVGQASWPRLWFL*LYCNPQ Trigger: CTGAGGATTGCAGTATAGCCACAGAAACCAGAGCCT...AGGCCAGGAGGCCTGTCCTACATGCTCCCTCCTGGGACCAGTAACCTTGTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGACAGTTGGCTGGCCCTGAGGGTACACAAGGTTACTGGTCCCAGGAGGGAGAGGAGACAGGATCACTaGTTTGCTGGTGTGAACGAT | + |
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Preference number: 2 (lower is better) Translates to: SDSWLALRVHKVTGPRRERRQDH*FAGVND Trigger: ATCGTTCACACCAGCAAACCAGTGATCCTGTCTCCT...CTCCCTCCTGGGACCAGTAACCTTGTGTACCCTCAGGGCCAGCCAACTGTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGACCCCCAGGTGCTCTCCCTGGGCCTCTCAAGCCTGTCTTGTCCTTGCCTGATGACTGAAACAAGTTaGGGAGGAAACGGTTCGTTT | + |
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Preference number: 2 (lower is better) Translates to: SDPQVLSLGLSSLSCPCLMTETS*GGNGSF Trigger: AAACGAACCGTTTCCTCCCCAACTTGTTTCAGTCAT...CAGGCAAGGACAAGACAGGCTTGAGAGGCCCAGGGAGAGCACCTGGGGGTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCTGTGGGCCAGATAGCTTGGAGGCTAAACAGAGTTCACGTGGTATATTTCCCAGGTGCTCTCCCTaGGCCTCTCAAGCCTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: PSCGPDSLEAKQSSRGIFPRCSP*ASQACL Trigger: AAGACAGGCTTGAGAGGCCCAGGGAGAGCACCTGGG...AAATATACCACGTGAACTCTGTTTAGCCTCCAAGCTATCTGGCCCACAGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCTGTGGGCCAGATAGCTTGGAGGCTAAACAGAGTTCACGTGGTATATTTACTGCAATCCTCAGGTaGGCTGGCCTGCAAGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: PSCGPDSLEAKQSSRGIFTAILR*AGLQGS Trigger: GGAACCTTGCAGGCCAGCTCACCTGAGGATTGCAGT...AAATATACCACGTGAACTCTGTTTAGCCTCCAAGCTATCTGGCCCACAGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGCCCATCTCCTAGATCCAGTCCCAGATGACAGTGAAGTCTACGTCTGTGACGCCCTGCCTGGTGTTTaGTGGTACAGGATACAGATG | + |
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Preference number: 2 (lower is better) Translates to: VAHLLDPVPDDSEVYVCDALPGV*WYRIQM Trigger: CATCTGTATCCTGTACCATCAAACACCAGGCAGGGC...GTCACAGACGTAGACTTCACTGTCATCTGGGACTGGATCTAGGAGATGGGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR GCA 90 bp | ACATGCTTGGAAGAACAAACATCTGACCCCCAGGTGCTCTCCCTGGGCCTCTCATCAGGTGAGCTGGCCTaGAAGGTTCCAGACAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: TCLEEQTSDPQVLSLGLSSGELA*KVPDSF Trigger: AAAACTGTCTGGAACCTTGCAGGCCAGCTCACCTGA...TGAGAGGCCCAGGGAGAGCACCTGGGGGTCAGATGTTTGTTCTTCCAAGCATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR CCA 90 bp | TGGGACCTGAACTTGGGTCTTCATTCCTCTGCTGGACATTGTTCACTGAGCCATGGTGCAGGCCTTGGTTaGAATCCAGCAGGGGCACAT | + |
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Preference number: 2 (lower is better) Translates to: WDLNLGLHSSAGHCSLSHGAGLG*NPAGAH Trigger: ATGTGCCCCTGCTGGATTCCAACCAAGGCCTGCACC...ATGGCTCAGTGAACAATGTCCAGCAGAGGAATGAAGACCCAAGTTCAGGTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR CCA 90 bp | GTGGCCCATCTCCTAGATCCAGTCCCAGATGACAGTGAAGTCTACGTCTGTGACGTTAGGGGAGAGGGTTaGAGGCCTTCTAAACTGAGC | + |
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Preference number: 2 (lower is better) Translates to: VAHLLDPVPDDSEVYVCDVRGEG*RPSKLS Trigger: GCTCAGTTTAGAAGGCCTCCAACCCTCTCCCCTAAC...GTCACAGACGTAGACTTCACTGTCATCTGGGACTGGATCTAGGAGATGGGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCTGTGGGCCAGATAGCTTGGAGGCTAAACAGAGTTCACGTGGTATATTTTATCTCAGGCAGCCCTaGCCTGAGGCAGTTCATGTG | + |
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Preference number: 2 (lower is better) Translates to: PSCGPDSLEAKQSSRGIFYLRQP*PEAVHV Trigger: CACATGAACTGCCTCAGGTCAGGGCTGCCTGAGATA...AAATATACCACGTGAACTCTGTTTAGCCTCCAAGCTATCTGGCCCACAGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR GCA 90 bp | TGGGACCTGAACTTGGGTCTTCATTCCTCTGCTGGACATTGTTCACTGAGCCATGAGCCACCATGTGGGTaGCAGGAATTGAACCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: WDLNLGLHSSAGHCSLSHEPPCG*QELNPG Trigger: ACCTGGGTTCAATTCCTGGCACCCACATGGTGGCTC...ATGGCTCAGTGAACAATGTCCAGCAGAGGAATGAAGACCCAAGTTCAGGTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR GCA 90 bp | ACATGCTTGGAAGAACAAACATCTGACCCCCAGGTGCTCTCCCTGGGCCTCTCAGGGTCTTCATTCCTCTaGTGGACATTGTTCACTGAG | + |
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Preference number: 2 (lower is better) Translates to: TCLEEQTSDPQVLSLGLSGSSFL*WTLFTE Trigger: CTCAGTGAACAATGTCCAGCAGAGGAATGAAGACCC...TGAGAGGCCCAGGGAGAGCACCTGGGGGTCAGATGTTTGTTCTTCCAAGCATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR GCA 90 bp | GTACACAAGGTTACTGGTCCCAGGAGGGAGCATGTAGGACAGGCCTCCTGGCCTGAGGTTACAAACATGTaGCATAGCATCTGGCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: VHKVTGPRREHVGQASWPEVTNM*HSIWLL Trigger: AAGAAGCCAGATGCTATGGCACATGTTTGTAACCTC...AGGCCAGGAGGCCTGTCCTACATGCTCCCTCCTGGGACCAGTAACCTTGTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR CCA 90 bp | GATGGTACAGGATACAGATGTAACAGCAAACGGATGCCTTTGGTGATAAAGGTACCACCAGCCCAGGGATaGCCCCACCCACAATGGGCT | + |
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Preference number: 2 (lower is better) Translates to: DGTGYRCNSKRMPLVIKVPPAQG*PHPQWA Trigger: AGCCCATTGTGGGTGGGGCCATCCCTGGGCTGGTGG...TACCTTTATCACCAAAGGCATCCGTTTGCTGTTACATCTGTATCCTGTACCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR CCA 90 bp | GTACTTGAGAGGCAGAAGCAGGCGGATCACTGTGAGTTCCAGGCCAGCATGGTCGGAGGAGAACATGCTTaGAAGAACAAACATCTGACC | + |
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Preference number: 2 (lower is better) Translates to: VLERQKQADHCEFQASMVGGEHA*KNKHLT Trigger: GGTCAGATGTTTGTTCTTCCAAGCATGTTCTCCTCC...GACCATGCTGGCCTGGAACTCACAGTGATCCGCCTGCTTCTGCCTCTCAAGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGGCCCTCCCCATCAATCACTAATTAAGAAAATGCCCTACAGGCTTGCCAGTGCTCTTAACCACTaGGCCATTTCTTTAGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: GLGPPHQSLIKKMPYRLASALNH*AISLVP Trigger: GGGGACTAAAGAAATGGCTCAGTGGTTAAGAGCACT...GGCAAGCCTGTAGGGCATTTTCTTAATTAGTGATTGATGGGGAGGGCCCAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGATGACAGTGAAGTCTACGTCTGTGACAGTATGGAGCATCACAGAACCTTCACAGTTGGCTGGCCCTaGGGGTACACAAGGTTACTG | + |
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Preference number: 2 (lower is better) Translates to: PDDSEVYVCDSMEHHRTFTVGWP*GYTRLL Trigger: CAGTAACCTTGTGTACCCTCAGGGCCAGCCAACTGT...GAAGGTTCTGTGATGCTCCATACTGTCACAGACGTAGACTTCACTGTCATCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR CCA 90 bp | ACATGCTTGGAAGAACAAACATCTGACCCCCAGGTGCTCTCCCTGGGCCTCTCAGCTTCTTGTATGTTCTaGGACCTGAACTTGGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: TCLEEQTSDPQVLSLGLSASCMF*DLNLGL Trigger: AAGACCCAAGTTCAGGTCCCAGAACATACAAGAAGC...TGAGAGGCCCAGGGAGAGCACCTGGGGGTCAGATGTTTGTTCTTCCAAGCATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR CAA 90 bp | GAACCCATTAAAGATGGTTGTGAGCCACCATGTGGGTGCCAGGAATaGAACCCAGGTCCTCTGATAGAACAGCCAGTGCTCTTAACCACT | + |
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Preference number: 2 (lower is better) Translates to: EPIKDGCEPPCGCQE*NPGPLIEQPVLLTT Trigger: AGTGGTTAAGAGCACTGGCTGTTCTATCAGAGGACCTGGGTTCAATTCCTGGCACCCACATGGTGGCTCACAACCATCTTTAATGGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR CCA 90 bp | GCTTGCCTACAGCCTGATTTTAAGGAGGCACTTTCTCAACTGAGGCTCTGGTCTTGGTTCCTGAGGCTCTaGTTTCTGTGGCTATACTGC | + |
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Preference number: 2 (lower is better) Translates to: ACLQPDFKEALSQLRLWSWFLRL*FLWLYC Trigger: GCAGTATAGCCACAGAAACCAGAGCCTCAGGAACCA...AGACCAGAGCCTCAGTTGAGAAAGTGCCTCCTTAAAATCAGGCTGTAGGCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| 3UTR-3UTR CCA 90 bp | GTGGCCCATCTCCTAGATCCAGTCCCAGATGACAGTGAAGTCTACGTCTGTGACGCCATAGCACATATGTaGAAGGTGTTCTTGAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: VAHLLDPVPDDSEVYVCDAIAHM*KVFLRQ Trigger: CTGTCTCAAGAACACCTTCCACATATGTGCTATGGC...GTCACAGACGTAGACTTCACTGTCATCTGGGACTGGATCTAGGAGATGGGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR CCA 90 bp | CCAGATGACAGTGAAGTCTACGTCTGTGACAGTATGGAGCATCACAGAACCTTCGGCCTTAATCAGTTGTaGTTCTCTGCCACCTGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PDDSEVYVCDSMEHHRTFGLNQL*FSATCA Trigger: GGCACAGGTGGCAGAGAACCACAACTGATTAAGGCC...GAAGGTTCTGTGATGCTCCATACTGTCACAGACGTAGACTTCACTGTCATCTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGCTGTGGGCCAGATAGCTTGGAGGCTAAACAGAGTTCACGTGGTATATTTTCTTCACACTTCCTATaGGGTGTGACCTCAGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: PSCGPDSLEAKQSSRGIFSSHFL*GVTSVV Trigger: GACCACTGAGGTCACACCCCATAGGAAGTGTGAAGA...AAATATACCACGTGAACTCTGTTTAGCCTCCAAGCTATCTGGCCCACAGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CAA 90 bp | AAGTGTGGATACGTGTGTGCCATAGCACATATGTGGAAGGTGTTCTaGAGACAGGAGACAGGATCACTGGTTTGCTGGTGTGAACGATGC | + |
|
Preference number: 2 (lower is better) Translates to: KCGYVCAIAHMWKVF*RQETGSLVCWCERC Trigger: GCATCGTTCACACCAGCAAACCAGTGATCCTGTCTCCTGTCTCAAGAACACCTTCCACATATGTGCTATGGCACACACGTATCCACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR TCA 90 bp | GTGGCCCATCTCCTAGATCCAGTCCCAGATGACAGTGAAGTCTACGTCTGTGACGCCCATAGTCATCATTaGGTTGAGAATAATGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: VAHLLDPVPDDSEVYVCDAHSHH*VENNGE Trigger: TTCCCCATTATTCTCAACTCAATGATGACTATGGGC...GTCACAGACGTAGACTTCACTGTCATCTGGGACTGGATCTAGGAGATGGGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR GCA 90 bp | GCTTGCCTACAGCCTGATTTTAAGGAGGCACTTTCTCAACTGAGGCTCTGGTCTTTTCTGTGGCTATACTaGAATCCTCAGGTGAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ACLQPDFKEALSQLRLWSFLWLY*NPQVSW Trigger: CCAGCTCACCTGAGGATTGCAGTATAGCCACAGAAA...AGACCAGAGCCTCAGTTGAGAAAGTGCCTCCTTAAAATCAGGCTGTAGGCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR TCA 90 bp | CCAGATGACAGTGAAGTCTACGTCTGTGACAGTATGGAGCATCACAGAACCTTCGGAGGCCTTCTAAACTaGGCCATGACAAACTGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: PDDSEVYVCDSMEHHRTFGGLLN*AMTNCL Trigger: AAGACAGTTTGTCATGGCTCAGTTTAGAAGGCCTCC...GAAGGTTCTGTGATGCTCCATACTGTCACAGACGTAGACTTCACTGTCATCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR GCA 90 bp | TGTGCCATAGCATCTGGCTTCTTGTATGTTCTGGGACCTGAACTTGGGTCTTCAAAATGGACTAGAAGGTaGAGGCCTTGGTTGGAATCC | + |
|
Preference number: 2 (lower is better) Translates to: CAIASGFLYVLGPELGSSKWTRR*RPWLES Trigger: GGATTCCAACCAAGGCCTGCACCTTCTAGTCCATTT...TGAAGACCCAAGTTCAGGTCCCAGAACATACAAGAAGCCAGATGCTATGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR GCA 90 bp | AGGCGGATCACTGTGAGTTCCAGGCCAGCATGGTCACATAGTAAGTACCAGGACGTGTGCTCATCACTTTaGCACAACACTTTATTCATG | + |
|
Preference number: 2 (lower is better) Translates to: RRITVSSRPAWSHSKYQDVCSSL*HNTLFM Trigger: CATGAATAAAGTGTTGTGGCAAAGTGATGAGCACAC...GTCCTGGTACTTACTATGTGACCATGCTGGCCTGGAACTCACAGTGATCCGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CAA 90 bp | GGAAAACCCGCAATGGCCCAGGAGGCGCCCATAGTCATCATTGAGTaGAGAATAATGGGGAAGGTCTGGGTTAAGAGCAAGAATATATTT | + |
|
Preference number: 2 (lower is better) Translates to: GKPAMAQEAPIVIIE*RIMGKVWVKSKNIF Trigger: AAATATATTCTTGCTCTTAACCCAGACCTTCCCCATTATTCTCAACTCAATGATGACTATGGGCGCCTCCTGGGCCATTGCGGGTTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR TCA 90 bp | CCCAGCTGTGGGCCAGATAGCTTGGAGGCTAAACAGAGTTCACGTGGTATATTTTTAGGGTTTCTACTGTaGGGAAACACCATGACTGAA | + |
|
Preference number: 2 (lower is better) Translates to: PSCGPDSLEAKQSSRGIFLGFLL*GNTMTE Trigger: TTCAGTCATGGTGTTTCCTCACAGTAGAAACCCTAA...AAATATACCACGTGAACTCTGTTTAGCCTCCAAGCTATCTGGCCCACAGCTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR GCA 90 bp | GAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGGTCGTCAAATGGACTAGAAGGTaGAGGCCTTGGTTGGAATCC | + |
|
Preference number: 2 (lower is better) Translates to: ENTEMCVASEMDALREVVKWTRR*RPWLES Trigger: GGATTCCAACCAAGGCCTGCACCTTCTAGTCCATTT...GACGACCTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| 3UTR-3UTR GCA 90 bp | AGCACATATGTGGAAGGTGTTCTTGAGACAGGAGACAGGATCACTGGTTTGCTGAGATCTATCTTGTTATaGAGCCAGAATGGCCTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: STYVEGVLETGDRITGLLRSILL*SQNGLD Trigger: ATCCAGGCCATTCTGGCTGCATAACAAGATAGATCT...CAGCAAACCAGTGATCCTGTCTCCTGTCTCAAGAACACCTTCCACATATGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CAA 90 bp | ACCATGACTGAAACAAGTTGGGGAGGAAACGGTTCGTTTGGCTTATaGTCACTGTTCATCATCAAAAGACAGGAACTCAAACAGAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: TMTETSWGGNGSFGL*SLFIIKRQELKQSQ Trigger: CTGGCTCTGTTTGAGTTCCTGTCTTTTGATGATGAACAGTGACAATAAGCCAAACGAACCGTTTCCTCCCCAACTTGTTTCAGTCATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR CCA 90 bp | ATATATTTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCGGTGCAGGCCTTGGTTaGAATCCAGCAGGGGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: IYFAENTEMCVASEMDALGAGLG*NPAGAH Trigger: ATGTGCCCCTGCTGGATTCCAACCAAGGCCTGCACC...GAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAAATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| 3UTR-3UTR CCA 90 bp | GATGGTACAGGATACAGATGTAACAGCAAACGGATGCCTTTGGTGATAAAGGTAATACAGAAATGTGTGTaGCTTCAGAAATGGATGCTC | + |
|
Preference number: 2 (lower is better) Translates to: DGTGYRCNSKRMPLVIKVIQKCV*LQKWML Trigger: GAGCATCCATTTCTGAAGCCACACACATTTCTGTAT...TACCTTTATCACCAAAGGCATCCGTTTGCTGTTACATCTGTATCCTGTACCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR GCA 90 bp | TGCCCCATTTCCTGTCTTAATGAATTGCCTCAAAACAAACAAGAGCATATTTTTTCAGTTGTGGTTCTCTaGCACCTGTGCCATTCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: CPISCLNELPQNKQEHIFSVVVL*HLCHSD Trigger: ATCTGAATGGCACAGGTGGCAGAGAACCACAACTGA...AAAAATATGCTCTTGTTTGTTTTGAGGCAATTCATTAAGACAGGAAATGGGGCA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CCA 72 bp | TCTCCCTGGGCCTCTCAAGCCTGTCTTGTCCTTGCCTaGGTTACCCTGCCTCTCGGAGGTGACGACGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SPWASQACLVLA*VTLPLGGDDAQ Trigger: TTGGGCGTCGTCACCTCCGAGAGGCAGGGTAACCCAGGCAAGGACAAGACAGGCTTGAGAGGCCCAGGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR TCA 72 bp | GCCTCCTGGCCTTTTCTGAACTATCTCAGGCAGCCCTaGCCTGAGGCAGTTCATGTGAGTCCCTGGGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASWPFLNYLRQP*PEAVHVSPWGR Trigger: CCTCCCCCAGGGACTCACATGAACTGCCTCAGGTCAGGGCTGCCTGAGATAGTTCAGAAAAGGCCAGGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR GCA 72 bp | CCTCTCAAGCCTGTCTTGTCCTTGCCTGGGTTACCCTaGCTCTCGGAGGTGACGACGCCCAATGTGTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PLKPVLSLPGLP*LSEVTTPNVLG Trigger: CCCTAACACATTGGGCGTCGTCACCTCCGAGAGGCAGGGTAACCCAGGCAAGGACAAGACAGGCTTGAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTGACAGTTGGCTGGCCCTGAGGGTACACAAGGTTACTGGTCCCAGGAGGGAGCCTCTCAAGCCTGTCTaGTCCTTGCCTGGGTTACCC | + |
|
Preference number: 3 (lower is better) Translates to: SDSWLALRVHKVTGPRREPLKPV*SLPGLP Trigger: GGGTAACCCAGGCAAGGACAAGACAGGCTTGAGAGG...CTCCCTCCTGGGACCAGTAACCTTGTGTACCCTCAGGGCCAGCCAACTGTCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTGACAGTTGGCTGGCCCTGAGGGTACACAAGGTTACTGGTCCCAGGAGGGAGCTTAATCCTAGCCCTTaGGGAGGCAGAAGCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SDSWLALRVHKVTGPRRELNPSP*GGRSRW Trigger: CCACCTGCTTCTGCCTCCCAAAGGGCTAGGATTAAG...CTCCCTCCTGGGACCAGTAACCTTGTGTACCCTCAGGGCCAGCCAACTGTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR TCA 72 bp | GACTCGGAGGAGAACATGCTTGGAAGAACAAACATCTaGCCCCCAGGTGCTCTCCCTGGGCCTCTCAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: DSEENMLGRTNI*PPGALPGPLKP Trigger: AGGCTTGAGAGGCCCAGGGAGAGCACCTGGGGGTCAGATGTTTGTTCTTCCAAGCATGTTCTCCTCCGAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR TCA 72 bp | CTGGCCTTTTCTGAACTATCTCAGGCAGCCCTGACCTaGGGCAGTTCATGTGAGTCCCTGGGGGAGGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: LAFSELSQAALT*GSSCESLGEAH Trigger: ATGTGCCTCCCCCAGGGACTCACATGAACTGCCTCAGGTCAGGGCTGCCTGAGATAGTTCAGAAAAGGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR GCA 72 bp | GATGCAGAGGCTGTGGTGGGGTGCTGCTTCCTGTCCTaGTCTTATAAAACCCAAGACCACCAGCCCAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: DAEAVVGCCFLS*SYKTQDHQPRD Trigger: ATCCCTGGGCTGGTGGTCTTGGGTTTTATAAGAGCAGGACAGGAAGCAGCACCCCACCACAGCCTCTGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR GCA 72 bp | GAGGAGGACAGGTATGTTTCAGATAGTTCGCATCTCTaGAGGGCGAGTGGAGGGAGGAGGCCGTGGTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: EEDRYVSDSSHL*RASGGRRPWFL Trigger: CAGAAACCACGGCCTCCTCCCTCCACTCGCCCTGCAGAGATGCGAACTATCTGAAACATACCTGTCCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CCA 72 bp | GTGTTCTTGAGACAGGAGACAGGATCACTGGTTTGCTaGTGTGAACGATGCCTGGCTAGCTGGCCTGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: VFLRQETGSLVC*CERCLASWPGS Trigger: GCTCCCAGGCCAGCTAGCCAGGCATCGTTCACACCAGCAAACCAGTGATCCTGTCTCCTGTCTCAAGAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR GCA 72 bp | AAGGTGTTCTTGAGACAGGAGACAGGATCACTGGTTTaGTGGTGTGAACGATGCCTGGCTAGCTGGCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KVFLRQETGSLV*WCERCLASWPG Trigger: CCCAGGCCAGCTAGCCAGGCATCGTTCACACCAGCAAACCAGTGATCCTGTCTCCTGTCTCAAGAACACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR GCA 72 bp | ACTCAGAGATCCTCAGGCCTCAGGCCTCATGGCCTCTaGATCCTGAGTACTGGGATTAAAGGTGTATGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: TQRSSGLRPHGL*ILSTGIKGVWP Trigger: GGGCCATACACCTTTAATCCCAGTACTCAGGATGCAGAGGCCATGAGGCCTGAGGCCTGAGGATCTCTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR CAA 90 bp | GCTTGCCTACAGCCTGATTTTAAGGAGGCACTTTCTCAACTGAGGCTCTGGTCTAGGTGCAGGCCTTGGTaGGAATCCAGCAGGGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: ACLQPDFKEALSQLRLWSRCRPW*ESSRGT Trigger: TGTGCCCCTGCTGGATTCCAACCAAGGCCTGCACCT...AGACCAGAGCCTCAGTTGAGAAAGTGCCTCCTTAAAATCAGGCTGTAGGCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR CAA 90 bp | GTACACAAGGTTACTGGTCCCAGGAGGGAGCATGTAGGACAGGCCTCCTGGCCTGATCTCAAACTTGAGTaGGTTCCTGAGGCTCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VHKVTGPRREHVGQASWPDLKLE*VPEALV Trigger: AACCAGAGCCTCAGGAACCAACTCAAGTTTGAGATC...AGGCCAGGAGGCCTGTCCTACATGCTCCCTCCTGGGACCAGTAACCTTGTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTGACAGTTGGCTGGCCCTGAGGGTACACAAGGTTACTGGTCCCAGGAGGGAGATGTGGAAGGTGTTCTaGAGACAGGAGACAGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: SDSWLALRVHKVTGPRREMWKVF*RQETGS Trigger: TGATCCTGTCTCCTGTCTCAAGAACACCTTCCACAT...CTCCCTCCTGGGACCAGTAACCTTGTGTACCCTCAGGGCCAGCCAACTGTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CCA 72 bp | CAGAGAACCTGGAGGCAGAAGCTGATGCAGAGGCTGTaGTGGGGTGCTGCTTCCTGTCCTGCTCTTATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QRTWRQKLMQRL*WGAASCPALIK Trigger: TTTTATAAGAGCAGGACAGGAAGCAGCACCCCACCACAGCCTCTGCATCAGCTTCTGCCTCCAGGTTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CCA 72 bp | AGAAGCAGGCGGATCACTGTGAGTTCCAGGCCAGCATaGTCACATAGTAAGTACCAGGACAGTCAGAGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: RSRRITVSSRPA*SHSKYQDSQSY Trigger: GTAGCTCTGACTGTCCTGGTACTTACTATGTGACCATGCTGGCCTGGAACTCACAGTGATCCGCCTGCTTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CCA 72 bp | TCCCAGATGACAGTGAAGTCTACGTCTGTGACAGTATaGAGCATCACAGAACCTTCCCCTCCCTTTCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SQMTVKSTSVTV*SITEPSPPFPQ Trigger: CTGGGGAAAGGGAGGGGAAGGTTCTGTGATGCTCCATACTGTCACAGACGTAGACTTCACTGTCATCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGAGGTGCAGGCCTTGGTaGGAATCCAGCAGGGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: FAENTEMCVASEMDALRERCRPW*ESSRGT Trigger: TGTGCCCCTGCTGGATTCCAACCAAGGCCTGCACCT...CTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| 3UTR CCA 72 bp | AGGCTGATCTCAAACTTGAGTTGGTTCCTGAGGCTCTaGTTTCTGTGGCTATACTGCAATCCTCAGGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RLISNLSWFLRL*FLWLYCNPQVS Trigger: GCTCACCTGAGGATTGCAGTATAGCCACAGAAACCAGAGCCTCAGGAACCAACTCAAGTTTGAGATCAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CCA 72 bp | TTTGGTGATAAAGGTAGACTCGGAGGAGAACATGCTTaGAAGAACAAACATCTGACCCCCAGGTGCTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: FGDKGRLGGEHA*KNKHLTPRCSP Trigger: GGGAGAGCACCTGGGGGTCAGATGTTTGTTCTTCCAAGCATGTTCTCCTCCGAGTCTACCTTTATCACCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCCCATCTCCTAGATCCAGTCCCAGATGACAGTGAAGTCTACGTCTGTGACGGCAATTTAAGGCAGTaGAAGTTTCTTTTCCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VAHLLDPVPDDSEVYVCDGNLRQ*KFLFQQ Trigger: CTGCTGGAAAAGAAACTTCAACTGCCTTAAATTGCC...GTCACAGACGTAGACTTCACTGTCATCTGGGACTGGATCTAGGAGATGGGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR TCA 72 bp | TCAGATATTTCTCTCATAGGAATGGACTCTGACCTCTaGCAGTTGGCTGGCCCTGAGGGTACACAAGGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SDISLIGMDSDL*QLAGPEGTQGY Trigger: GTAACCTTGTGTACCCTCAGGGCCAGCCAACTGTCAGAGGTCAGAGTCCATTCCTATGAGAGAAATATCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR GCA 72 bp | TCTGTGGCTATACTGCAATCCTCAGGTGAGCTGGCCTaGAAGGTTCCAGACAGTTTTCCTTTCAGTAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SVAILQSSGELA*KVPDSFPFSRS Trigger: ACTTCTACTGAAAGGAAAACTGTCTGGAACCTTGCAGGCCAGCTCACCTGAGGATTGCAGTATAGCCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR GCA 72 bp | AGCACTGATTGCTCTTCCAGAGGCCCAGCCAGTGTATaGCCCATTTCCTGTCTTAATGAATTGCCTCAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: STDCSSRGPASV*PISCLNELPQN Trigger: GTTTTGAGGCAATTCATTAAGACAGGAAATGGGGCATACACTGGCTGGGCCTCTGGAAGAGCAATCAGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CCA 72 bp | TGGTTTCTGTGGCTATACTGCAATCCTCAGGTGAGCTaGCCTGCAAGGTTCCAGACAGTTTTCCTTTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: WFLWLYCNPQVS*PARFQTVFLSV Trigger: TACTGAAAGGAAAACTGTCTGGAACCTTGCAGGCCAGCTCACCTGAGGATTGCAGTATAGCCACAGAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CCA 72 bp | ATCTCGAATTCCAAAACCATATCTTCACACTTCCTATaGGGTGTGACCTCAGTGGTCCTTCAAGCTGACCCC | + |
|
Preference number: 3 (lower is better) Translates to: ISNSKTISSHFL*GVTSVVLQADP Trigger: GGGGTCAGCTTGAAGGACCACTGAGGTCACACCCCATAGGAAGTGTGAAGATATGGTTTTGGAATTCGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR CAA 90 bp | AGCACATATGTGGAAGGTGTTCTTGAGACAGGAGACAGGATCACTGGTTTGCTGTCAGGTGTTGCTCTTTaGTCCTTACAGGCACGCATA | + |
|
Preference number: 3 (lower is better) Translates to: STYVEGVLETGDRITGLLSGVAL*SLQARI Trigger: TATGCGTGCCTGTAAGGACAAAAGAGCAACACCTGA...CAGCAAACCAGTGATCCTGTCTCCTGTCTCAAGAACACCTTCCACATATGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCCCATCTCCTAGATCCAGTCCCAGATGACAGTGAAGTCTACGTCTGTGACTCCTGTCTTAATGAATaGCCTCAAAACAAACAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VAHLLDPVPDDSEVYVCDSCLNE*PQNKQE Trigger: CTCTTGTTTGTTTTGAGGCAATTCATTAAGACAGGA...GTCACAGACGTAGACTTCACTGTCATCTGGGACTGGATCTAGGAGATGGGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR TCA 72 bp | TGCCATAGCATCTGGCTTCTTGTATGTTCTGGGACCTaGACTTGGGTCTTCATTCCTCTGCTGGACATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: CHSIWLLVCSGT*TWVFIPLLDIV Trigger: AACAATGTCCAGCAGAGGAATGAAGACCCAAGTTCAGGTCCCAGAACATACAAGAAGCCAGATGCTATGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR TCA 72 bp | AATGTGTTAGGGGAGAGGGTTGGAGGCCTTCTAAACTaGGCCATGACAAACTGTCTTAGGGTTTCTACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: NVLGERVGGLLN*AMTNCLRVSTV Trigger: CACAGTAGAAACCCTAAGACAGTTTGTCATGGCTCAGTTTAGAAGGCCTCCAACCCTCTCCCCTAACACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CCA 72 bp | AGTAAGTGTGGATACGTGTGTGCCATAGCACATATGTaGAAGGTGTTCTTGAGACAGGAGACAGGATCACTG | + |
|
Preference number: 3 (lower is better) Translates to: SKCGYVCAIAHM*KVFLRQETGSL Trigger: CAGTGATCCTGTCTCCTGTCTCAAGAACACCTTCCACATATGTGCTATGGCACACACGTATCCACACTTACT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR TCA 72 bp | TGTCTTAGGGTTTCTACTGTGAGGAAACACCATGACTaGAACAAGTTGGGGAGGAAACGGTTCGTTTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CLRVSTVRKHHD*NKLGRKRFVWL Trigger: AAGCCAAACGAACCGTTTCCTCCCCAACTTGTTTCAGTCATGGTGTTTCCTCACAGTAGAAACCCTAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR GCA 72 bp | GCCCAGGGGATACTTGTGACTCAGAATAGCCATAAATaGAGCCCAACACAGAGTTGTAAATTTAGCTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: AQGILVTQNSHK*SPTQSCKFSCS Trigger: AGAGCAGCTAAATTTACAACTCTGTGTTGGGCTGCATTTATGGCTATTCTGAGTCACAAGTATCCCCTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR CAA 90 bp | AGCACATATGTGGAAGGTGTTCTTGAGACAGGAGACAGGATCACTGGTTTGCTGTTTAAAAGATCTATCTaGTTATGCAGCCAGAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: STYVEGVLETGDRITGLLFKRSI*LCSQNG Trigger: GCCATTCTGGCTGCATAACAAGATAGATCTTTTAAA...CAGCAAACCAGTGATCCTGTCTCCTGTCTCAAGAACACCTTCCACATATGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CCA 72 bp | GTGCAGTTGTTGAACTTTGTGGCAATTTCAAAAGGTTaGACATACCTGGTGGTTAAGGGATTTCTTCGATGG | + |
|
Preference number: 3 (lower is better) Translates to: VQLLNFVAISKG*TYLVVKGFLRW Trigger: CCATCGAAGAAATCCCTTAACCACCAGGTATGTCCAACCTTTTGAAATTGCCACAAAGTTCAACAACTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR-3UTR CAA 90 bp | GATGGTACAGGATACAGATGTAACAGCAAACGGATGCCTTTGGTGATAAAGGTATCTTTCTTTGTTCTTTaGAGAGAGAGGGTCTCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: DGTGYRCNSKRMPLVIKVSFFVL*RERVSY Trigger: ATAGGAGACCCTCTCTCTCAAAAGAACAAAGAAAGA...TACCTTTATCACCAAAGGCATCCGTTTGCTGTTACATCTGTATCCTGTACCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR GCA 72 bp | TATTTGTGCAGGCCTAGAAGCATGAAACTCAGAGATTaGTTCATCAGCACAGATGTGTATCTCTTGTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: YLCRPRSMKLRD*FISTDVYLLFI Trigger: AATAAACAAGAGATACACATCTGTGCTGATGAAGCAATCTCTGAGTTTCATGCTTCTAGGCCTGCACAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CAA 72 bp | CCCCCAGGTGCTCTCCCTGGGCCTCTCAAGCCTGTCTaGTCCTTGCCTGGGTTACCCTGCCTCTCGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPGALPGPLKPV*SLPGLPCLSEV Trigger: CACCTCCGAGAGGCAGGGTAACCCAGGCAAGGACAAGACAGGCTTGAGAGGCCCAGGGAGAGCACCTGGGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CAA 72 bp | GGTGCTCTCCCTGGGCCTCTCAAGCCTGTCTTGTCCTaGCCTGGGTTACCCTGCCTCTCGGAGGTGACGACG | + |
|
Preference number: 4 (lower is better) Translates to: GALPGPLKPVLS*PGLPCLSEVTT Trigger: CGTCGTCACCTCCGAGAGGCAGGGTAACCCAGGCAAGGACAAGACAGGCTTGAGAGGCCCAGGGAGAGCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR TCA 90 bp | GTCCAGGGTGGTCTAAGGCAGTCTCTTGAGGGAGGGCTAGGGCGTGCCCATCTGCGCATGATGGAGGCATaGGCCAGGCGGTCATACACA | + |
|
Preference number: 4 (lower is better) Translates to: VQGGLRQSLEGGLGRAHLRMMEA*ARRSYT Trigger: TGTGTATGACCGCCTGGCTCATGCCTCCATCATGCG...CAGATGGGCACGCCCTAGCCCTCCCTCAAGAGACTGCCTTAGACCACCCTGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| 3UTR CAA 72 bp | CCAGGCGGTGGCGGCGCACGCCTTAATCCTAGCCCTTaGGGAGGCAGAAGCAGGTGGATCTCTGAGTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGGGGARLNPSP*GGRSRWISEFE Trigger: CTCAAACTCAGAGATCCACCTGCTTCTGCCTCCCAAAGGGCTAGGATTAAGGCGTGCGCCGCCACCGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR GCA 90 bp | AGATCCCCAGCCATCCGTGTCCAGGGTGGTCTAAGGCAGTCTCTTGAGGGAGGGCGGCCTGGACAGTGCTaGGTGTTCCTCTTCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RSPAIRVQGGLRQSLEGGRPGQC*VFLFLI Trigger: GATGAGGAAGAGGAACACGCAGCACTGTCCAGGCCG...CCCTCCCTCAAGAGACTGCCTTAGACCACCCTGGACACGGATGGCTGGGGATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR GCA 90 bp | GTCCAGGGTGGTCTAAGGCAGTCTCTTGAGGGAGGGCTAGGGCGTGCCCATCTGCCCTTACTGGTGTTCTaGTCCAGCTGCTCTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VQGGLRQSLEGGLGRAHLPLLVF*SSCSVI Trigger: GATCACAGAGCAGCTGGAGCAGAACACCAGTAAGGG...CAGATGGGCACGCCCTAGCCCTCCCTCAAGAGACTGCCTTAGACCACCCTGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CCA 90 bp | GTCCAGGGTGGTCTAAGGCAGTCTCTTGAGGGAGGGCTAGGGCGTGCCCATCTGAACAGGCCCCGACACTaGCAACACAAAGCGACCATT | + |
|
Preference number: 4 (lower is better) Translates to: VQGGLRQSLEGGLGRAHLNRPRH*QHKATI Trigger: AATGGTCGCTTTGTGTTGCCAGTGTCGGGGCCTGTT...CAGATGGGCACGCCCTAGCCCTCCCTCAAGAGACTGCCTTAGACCACCCTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR GCA 90 bp | GGCAGTTCATGTGAGTCCCTGGGGGAGGCACATCACATACACCTCCTAGGCACCCTGTGCCCTGGAGGCTaGGTTCTTGGATGTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSSCESLGEAHHIHLLGTLCPGG*VLGCCR Trigger: TCTGCAACATCCAAGAACGCAGCCTCCAGGGCACAG...GGTGCCTAGGAGGTGTATGTGATGTGCCTCCCCCAGGGACTCACATGAACTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR GCA 90 bp | GGCAGTTCATGTGAGTCCCTGGGGGAGGCACATCACATACACCTCCTAGGCACCCGTAGAGCTTATCCATaGTGGCCTGGTTCAGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSCESLGEAHHIHLLGTRRAYP*WPGSVA Trigger: TGCGACTGAACCAGGCCAGCATGGATAAGCTCTACG...GGTGCCTAGGAGGTGTATGTGATGTGCCTCCCCCAGGGACTCACATGAACTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR GCA 90 bp | GTCCAGGGTGGTCTAAGGCAGTCTCTTGAGGGAGGGCTAGGGCGTGCCCATCTGGTGGACACTCGGATATaGAGGTCTTGGAAGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VQGGLRQSLEGGLGRAHLVDTRI*RSWKKL Trigger: CAACTTCTTCCAAGACCTGCATATCCGAGTGTCCAC...CAGATGGGCACGCCCTAGCCCTCCCTCAAGAGACTGCCTTAGACCACCCTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR GCA 90 bp | GGCAGTTCATGTGAGTCCCTGGGGGAGGCACATCACATACACCTCCTAGGCACCCCCTTACTGGTGTTCTaGTCCAGCTGCTCTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GSSCESLGEAHHIHLLGTPLLVF*SSCSVI Trigger: GATCACAGAGCAGCTGGAGCAGAACACCAGTAAGGG...GGTGCCTAGGAGGTGTATGTGATGTGCCTCCCCCAGGGACTCACATGAACTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CCA 90 bp | TCTGACCCCCAGGTGCTCTCCCTGGGCCTCTCAAGCCTGTCTTGTCCTTGCCTGTCCCTCCCATTAGCCTaGCCAAGAAATTCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDPQVLSLGLSSLSCPCLSLPLA*PRNSAL Trigger: AAGAGCTGAATTTCTTGGCCAGGCTAATGGGAGGGA...CAGGCAAGGACAAGACAGGCTTGAGAGGCCCAGGGAGAGCACCTGGGGGTCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CCA 90 bp | GTGGCCCATCTCCTAGATCCAGTCCCAGATGACAGTGAAGTCTACGTCTGTGACGTCTGCCGGATCAGCTaGAACTCCCCTTCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VAHLLDPVPDDSEVYVCDVCRIS*NSPSES Trigger: GCTCTCTGAAGGGGAGTTCCAGCTGATCCGGCAGAC...GTCACAGACGTAGACTTCACTGTCATCTGGGACTGGATCTAGGAGATGGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CAA 72 bp | CTGGATCCCCCTCCTGTGTTTTCAGGTGTTGCTCTTTaGTCCTTACAGGCACGCATAGGACGCTGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDPPPVFSGVAL*SLQARIGRWSL Trigger: CAGGGACCAGCGTCCTATGCGTGCCTGTAAGGACAAAAGAGCAACACCTGAAAACACAGGAGGGGGATCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR TCA 90 bp | GCTTGCCTACAGCCTGATTTTAAGGAGGCACTTTCTCAACTGAGGCTCTGGTCTCCTGGTTCAGTCGCATaGTGGAGGCATGAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ACLQPDFKEALSQLRLWSPGSVA*WRHEPG Trigger: GCCTGGCTCATGCCTCCATCATGCGACTGAACCAGG...AGACCAGAGCCTCAGTTGAGAAAGTGCCTCCTTAAAATCAGGCTGTAGGCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR TCA 90 bp | AGATCCCCAGCCATCCGTGTCCAGGGTGGTCTAAGGCAGTCTCTTGAGGGAGGGGCAGCACTTGATATTTaGAAGCCATGGTCATCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSPAIRVQGGLRQSLEGGAALDI*KPWSSG Trigger: ACCTGATGACCATGGCTTTCAAATATCAAGTGCTGC...CCCTCCCTCAAGAGACTGCCTTAGACCACCCTGGACACGGATGGCTGGGGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGGCCCTCCCCATCAATCACTAATTAAGAAAATGCCCTACAGGCTTGCCTACACTTCTGACAGCTaGCGGAAGGTCTCGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GLGPPHQSLIKKMPYRLAYTSDS*RKVSST Trigger: GGTGGACGAGACCTTCCGGCAGCTGTCAGAAGTGTA...GGCAAGCCTGTAGGGCATTTTCTTAATTAGTGATTGATGGGGAGGGCCCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR GCA 90 bp | GTACACAAGGTTACTGGTCCCAGGAGGGAGCATGTAGGACAGGCCTCCTGGCCTGTGGACACTCGGATATaGAGGTCTTGGAAGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VHKVTGPRREHVGQASWPVDTRI*RSWKKL Trigger: CAACTTCTTCCAAGACCTGCATATCCGAGTGTCCAC...AGGCCAGGAGGCCTGTCCTACATGCTCCCTCCTGGGACCAGTAACCTTGTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR GCA 90 bp | GGCAGTTCATGTGAGTCCCTGGGGGAGGCACATCACATACACCTCCTAGGCACCGTGTTCTGCTCCAGCTaGTCTGTGATCTCAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSCESLGEAHHIHLLGTVFCSS*SVISNS Trigger: TGAGTTTGAGATCACAGAGCAGCTGGAGCAGAACAC...GGTGCCTAGGAGGTGTATGTGATGTGCCTCCCCCAGGGACTCACATGAACTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGGCCCTCCCCATCAATCACTAATTAAGAAAATGCCCTACAGGCTTGCCCACGTCCTTGGGGCGTaGACACAGCAGCACTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: GLGPPHQSLIKKMPYRLAHVLGA*TQQHLI Trigger: TATCAAGTGCTGCTGTGTCCACGCCCCAAGGACGTG...GGCAAGCCTGTAGGGCATTTTCTTAATTAGTGATTGATGGGGAGGGCCCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CCA 90 bp | TCTGACCCCCAGGTGCTCTCCCTGGGCCTCTCAAGCCTGTCTTGTCCTTGCCTGTTTGGCAAGAGGGTTTaGAACAATGTTTTCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SDPQVLSLGLSSLSCPCLFGKRV*NNVFLC Trigger: GCACAGGAAAACATTGTTCCAAACCCTCTTGCCAAA...CAGGCAAGGACAAGACAGGCTTGAGAGGCCCAGGGAGAGCACCTGGGGGTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR TCA 90 bp | AGATCCCCAGCCATCCGTGTCCAGGGTGGTCTAAGGCAGTCTCTTGAGGGAGGGCCTGTTGAACATGGTTaGAATGATGTCGTTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSPAIRVQGGLRQSLEGGPVEHG*NDVVQN Trigger: GTTCTGAACGACATCATTTCAACCATGTTCAACAGG...CCCTCCCTCAAGAGACTGCCTTAGACCACCCTGGACACGGATGGCTGGGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR GCA 90 bp | TGGAAGAACAAACATCTGACCCCCAGGTGCTCTCCCTGGGCCTCTCAAGCCTGTAACAATGTTTTCCTGTaGCCTGGAGGCTGCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WKNKHLTPRCSPWASQACNNVFL*PGGCVL Trigger: AAGAACGCAGCCTCCAGGGCACAGGAAAACATTGTT...ACAGGCTTGAGAGGCCCAGGGAGAGCACCTGGGGGTCAGATGTTTGTTCTTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGGCCCTCCCCATCAATCACTAATTAAGAAAATGCCCTACAGGCTTGCCAACAGGCCCCGACACTaGCAACACAAAGCGACCATT | + |
|
Preference number: 4 (lower is better) Translates to: GLGPPHQSLIKKMPYRLANRPRH*QHKATI Trigger: AATGGTCGCTTTGTGTTGCCAGTGTCGGGGCCTGTT...GGCAAGCCTGTAGGGCATTTTCTTAATTAGTGATTGATGGGGAGGGCCCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CCA 90 bp | GTGGCCCATCTCCTAGATCCAGTCCCAGATGACAGTGAAGTCTACGTCTGTGACTGTTTTCCTGTGCCCTaGAGGCTGCGTTCTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VAHLLDPVPDDSEVYVCDCFPVP*RLRSWM Trigger: CATCCAAGAACGCAGCCTCCAGGGCACAGGAAAACA...GTCACAGACGTAGACTTCACTGTCATCTGGGACTGGATCTAGGAGATGGGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGGCCCTCCCCATCAATCACTAATTAAGAAAATGCCCTACAGGCTTGCCAGTCGTCTCCCTTACTaGTGTTCTGCTCCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGPPHQSLIKKMPYRLASRLPY*CSAPAA Trigger: AGCAGCTGGAGCAGAACACCAGTAAGGGAGACGACT...GGCAAGCCTGTAGGGCATTTTCTTAATTAGTGATTGATGGGGAGGGCCCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CAA 72 bp | AAAGATGGTTGTGAGCCACCATGTGGGTGCCAGGAATaGAACCCAGGTCCTCTGATAGAACAGCCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KDGCEPPCGCQE*NPGPLIEQPVL Trigger: GAGCACTGGCTGTTCTATCAGAGGACCTGGGTTCAATTCCTGGCACCCACATGGTGGCTCACAACCATCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR TCA 90 bp | GTACACAAGGTTACTGGTCCCAGGAGGGAGCATGTAGGACAGGCCTCCTGGCCTCCTGTTGAACATGGTTaGAATGATGTCGTTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VHKVTGPRREHVGQASWPPVEHG*NDVVQN Trigger: GTTCTGAACGACATCATTTCAACCATGTTCAACAGG...AGGCCAGGAGGCCTGTCCTACATGCTCCCTCCTGGGACCAGTAACCTTGTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR GCA 90 bp | CCAGATGACAGTGAAGTCTACGTCTGTGACAGTATGGAGCATCACAGAACCTTCCGGCCTGGACAGTGCTaGGTGTTCCTCTTCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PDDSEVYVCDSMEHHRTFRPGQC*VFLFLI Trigger: GATGAGGAAGAGGAACACGCAGCACTGTCCAGGCCG...GAAGGTTCTGTGATGCTCCATACTGTCACAGACGTAGACTTCACTGTCATCTGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CCA 90 bp | GTGGCCCATCTCCTAGATCCAGTCCCAGATGACAGTGAAGTCTACGTCTGTGACTTATCCATGCTGGCCTaGTTCAGTCGCATGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VAHLLDPVPDDSEVYVCDLSMLA*FSRMME Trigger: CTCCATCATGCGACTGAACCAGGCCAGCATGGATAA...GTCACAGACGTAGACTTCACTGTCATCTGGGACTGGATCTAGGAGATGGGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CCA 90 bp | TCTGACAGTTGGCTGGCCCTGAGGGTACACAAGGTTACTGGTCCCAGGAGGGAGTGTCCTTTAGAAATGTaGACACTCGGATATGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDSWLALRVHKVTGPRRECPLEM*TLGYAG Trigger: ACCTGCATATCCGAGTGTCCACATTTCTAAAGGACA...CTCCCTCCTGGGACCAGTAACCTTGTGTACCCTCAGGGCCAGCCAACTGTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR TCA 90 bp | GAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGGTCGTCCGCATGATGGAGGCATaGGCCAGGCGGTCATACACA | + |
|
Preference number: 4 (lower is better) Translates to: ENTEMCVASEMDALREVVRMMEA*ARRSYT Trigger: TGTGTATGACCGCCTGGCTCATGCCTCCATCATGCG...GACGACCTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR GCA 90 bp | TGGGACCTGAACTTGGGTCTTCATTCCTCTGCTGGACATTGTTCACTGAGCCATAAGTTGAGCAGTGTCTaGCGGATCAGCTGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: WDLNLGLHSSAGHCSLSHKLSSV*RISWNS Trigger: GGAGTTCCAGCTGATCCGGCAGACACTGCTCAACTT...ATGGCTCAGTGAACAATGTCCAGCAGAGGAATGAAGACCCAAGTTCAGGTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CAA 72 bp | GCAATGGCCCAGGAGGCGCCCATAGTCATCATTGAGTaGAGAATAATGGGGAAGGTCTGGGTTAAGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AMAQEAPIVIIE*RIMGKVWVKSK Trigger: CTTGCTCTTAACCCAGACCTTCCCCATTATTCTCAACTCAATGATGACTATGGGCGCCTCCTGGGCCATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR GCA 90 bp | GAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGGTCGTCTACACTTCTGACAGCTaGCGGAAGGTCTCGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ENTEMCVASEMDALREVVYTSDS*RKVSST Trigger: GGTGGACGAGACCTTCCGGCAGCTGTCAGAAGTGTA...GACGACCTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CCA 90 bp | GTGGCCCATCTCCTAGATCCAGTCCCAGATGACAGTGAAGTCTACGTCTGTGACTTGATGGCGTCTAAGTaGTTGAAAGTGACCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VAHLLDPVPDDSEVYVCDLMASK*LKVTSN Trigger: GTTGCTGGTCACTTTCAACCACTTAGACGCCATCAA...GTCACAGACGTAGACTTCACTGTCATCTGGGACTGGATCTAGGAGATGGGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CAA 72 bp | TTTCCCCAGTCAGTCCCCAGCTGTGGGCCAGATAGCTaGGAGGCTAAACAGAGTTCACGTGGTATATTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FPQSVPSCGPDS*EAKQSSRGIFV Trigger: TACAAATATACCACGTGAACTCTGTTTAGCCTCCAAGCTATCTGGCCCACAGCTGGGGACTGACTGGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CCA 90 bp | ACATGCTTGGAAGAACAAACATCTGACCCCCAGGTGCTCTCCCTGGGCCTCTCAAATTCAGCTCTTCTTTaGCAAGAGGGTTTGGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: TCLEEQTSDPQVLSLGLSNSALL*QEGLEQ Trigger: TTGTTCCAAACCCTCTTGCCAAAGAAGAGCTGAATT...TGAGAGGCCCAGGGAGAGCACCTGGGGGTCAGATGTTTGTTCTTCCAAGCATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CCA 90 bp | GAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGGTCGTCAGTCGTCTCCCTTACTaGTGTTCTGCTCCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ENTEMCVASEMDALREVVSRLPY*CSAPAA Trigger: AGCAGCTGGAGCAGAACACCAGTAAGGGAGACGACT...GACGACCTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| 3UTR CAA 72 bp | TACGTGTGTGCCATAGCACATATGTGGAAGGTGTTCTaGAGACAGGAGACAGGATCACTGGTTTGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YVCAIAHMWKVF*RQETGSLVCWC Trigger: ACACCAGCAAACCAGTGATCCTGTCTCCTGTCTCAAGAACACCTTCCACATATGTGCTATGGCACACACGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR TCA 90 bp | CCCAGCTGTGGGCCAGATAGCTTGGAGGCTAAACAGAGTTCACGTGGTATATTTGCAGCACTTGATATTTaGAAGCCATGGTCATCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSCGPDSLEAKQSSRGIFAALDI*KPWSSG Trigger: ACCTGATGACCATGGCTTTCAAATATCAAGTGCTGC...AAATATACCACGTGAACTCTGTTTAGCCTCCAAGCTATCTGGCCCACAGCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR GCA 90 bp | TGTGCCATAGCATCTGGCTTCTTGTATGTTCTGGGACCTGAACTTGGGTCTTCATGCGTTCTTGGATGTTaGAGACATGTGGGTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CAIASGFLYVLGPELGSSCVLGC*RHVGFH Trigger: GTGGAAACCCACATGTCTGCAACATCCAAGAACGCA...TGAAGACCCAAGTTCAGGTCCCAGAACATACAAGAAGCCAGATGCTATGGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR TCA 90 bp | GAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGGTCGTCGGACACAGCAGCACTTaGTATTTGAAAGCCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ENTEMCVASEMDALREVVGHSST*YLKAMV Trigger: GACCATGGCTTTCAAATATCAAGTGCTGCTGTGTCC...GACGACCTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGTGTTTTCCTGTGCCCTaGAGGCTGCGTTCTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FAENTEMCVASEMDALRECFPVP*RLRSWM Trigger: CATCCAAGAACGCAGCCTCCAGGGCACAGGAAAACA...CTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGTTATCCATGCTGGCCTaGTTCAGTCGCATGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FAENTEMCVASEMDALRELSMLA*FSRMME Trigger: CTCCATCATGCGACTGAACCAGGCCAGCATGGATAA...CTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| 3UTR CAA 72 bp | CTGAGGTTACAAACATGTGCCATAGCATCTGGCTTCTaGTATGTTCTGGGACCTGAACTTGGGTCTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LRLQTCAIASGF*YVLGPELGSSF Trigger: GAATGAAGACCCAAGTTCAGGTCCCAGAACATACAAGAAGCCAGATGCTATGGCACATGTTTGTAACCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CAA 72 bp | GGTACAGGATACAGATGTAACAGCAAACGGATGCCTTaGGTGATAAAGGTAGACTCGGAGGAGAACATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTGYRCNSKRMP*VIKVDSEENML Trigger: AAGCATGTTCTCCTCCGAGTCTACCTTTATCACCAAAGGCATCCGTTTGCTGTTACATCTGTATCCTGTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR TCA 90 bp | TTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGGGACACAGCAGCACTTaGTATTTGAAAGCCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FAENTEMCVASEMDALREGHSST*YLKAMV Trigger: GACCATGGCTTTCAAATATCAAGTGCTGCTGTGTCC...CTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR GCA 90 bp | TTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGTGCGTTCTTGGATGTTaGAGACATGTGGGTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FAENTEMCVASEMDALRECVLGC*RHVGFH Trigger: GTGGAAACCCACATGTCTGCAACATCCAAGAACGCA...CTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CCA 90 bp | ATATATTTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCGTCTGCCGGATCAGCTaGAACTCCCCTTCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IYFAENTEMCVASEMDALVCRIS*NSPSES Trigger: GCTCTCTGAAGGGGAGTTCCAGCTGATCCGGCAGAC...GAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAAATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR TCA 90 bp | TGCCCCATTTCCTGTCTTAATGAATTGCCTCAAAACAAACAAGAGCATATTTTTGGCCACTCGGCTTCTTaGTCTCCATCCCTCCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: CPISCLNELPQNKQEHIFGHSAS*SPSLPL Trigger: TAATGGGAGGGATGGAGATCAAGAAGCCGAGTGGCC...AAAAATATGCTCTTGTTTGTTTTGAGGCAATTCATTAAGACAGGAAATGGGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR TCA 90 bp | ATATATTTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCGGCCACTCGGCTTCTTaGTCTCCATCCCTCCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: IYFAENTEMCVASEMDALGHSAS*SPSLPL Trigger: TAATGGGAGGGATGGAGATCAAGAAGCCGAGTGGCC...GAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAAATATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR GCA 90 bp | ATATATTTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCTGTGCCCTGGAGGCTaGGTTCTTGGATGTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IYFAENTEMCVASEMDALLCPGG*VLGCCR Trigger: TCTGCAACATCCAAGAACGCAGCCTCCAGGGCACAG...GAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAAATATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CCA 90 bp | ATATATTTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCACGTCCTTGGGGCGTaGACACAGCAGCACTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: IYFAENTEMCVASEMDALHVLGA*TQQHLI Trigger: TATCAAGTGCTGCTGTGTCCACGCCCCAAGGACGTG...GAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAAATATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CCA 90 bp | GAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGGTCGTCAATTCAGCTCTTCTTTaGCAAGAGGGTTTGGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: ENTEMCVASEMDALREVVNSALL*QEGLEQ Trigger: TTGTTCCAAACCCTCTTGCCAAAGAAGAGCTGAATT...GACGACCTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR TCA 90 bp | GAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGGTCGTCCGACCATTAGAGTTCTaGACTTTGTCCTTTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ENTEMCVASEMDALREVVRPLEF*TLSFRN Trigger: ATTTCTAAAGGACAAAGTTCAGAACTCTAATGGTCG...GACGACCTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR GCA 90 bp | ATATATTTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGTAGAGCTTATCCATaGTGGCCTGGTTCAGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: IYFAENTEMCVASEMDALRRAYP*WPGSVA Trigger: TGCGACTGAACCAGGCCAGCATGGATAAGCTCTACG...GAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAAATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| 3UTR CAA 72 bp | GAAACAAGTTGGGGAGGAAACGGTTCGTTTGGCTTATaGTCACTGTTCATCATCAAAAGACAGGAACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ETSWGGNGSFGL*SLFIIKRQELK Trigger: TTTGAGTTCCTGTCTTTTGATGATGAACAGTGACAATAAGCCAAACGAACCGTTTCCTCCCCAACTTGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| 3UTR CAA 72 bp | TCACGTGGTATATTTGTAGCAGGCAATTTAAGGCAGTaGAAGTTTCTTTTCCAGCAGAAACAGGTGGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SRGIFVAGNLRQ*KFLFQQKQVGL Trigger: TAGACCCACCTGTTTCTGCTGGAAAAGAAACTTCAACTGCCTTAAATTGCCTGCTACAAATATACCACGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR GCA 90 bp | ATATATTTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCAACAATGTTTTCCTGTaGCCTGGAGGCTGCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IYFAENTEMCVASEMDALNNVFL*PGGCVL Trigger: AAGAACGCAGCCTCCAGGGCACAGGAAAACATTGTT...GAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAAATATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR GCA 90 bp | ATATATTTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCGTGTTCTGCTCCAGCTaGTCTGTGATCTCAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: IYFAENTEMCVASEMDALVFCSS*SVISNS Trigger: TGAGTTTGAGATCACAGAGCAGCTGGAGCAGAACAC...GAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAAATATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CCA 90 bp | TGCCCCATTTCCTGTCTTAATGAATTGCCTCAAAACAAACAAGAGCATATTTTTCGGATATGCAGGTCTTaGAAGAAGTTGAGCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CPISCLNELPQNKQEHIFRICRS*KKLSSV Trigger: GACACTGCTCAACTTCTTCCAAGACCTGCATATCCG...AAAAATATGCTCTTGTTTGTTTTGAGGCAATTCATTAAGACAGGAAATGGGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CCA 90 bp | ATATATTTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGGATATGCAGGTCTTaGAAGAAGTTGAGCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IYFAENTEMCVASEMDALRICRS*KKLSSV Trigger: GACACTGCTCAACTTCTTCCAAGACCTGCATATCCG...GAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAAATATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CCA 90 bp | ATATATTTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCTCCCTCCCATTAGCCTaGCCAAGAAATTCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IYFAENTEMCVASEMDALSLPLA*PRNSAL Trigger: AAGAGCTGAATTTCTTGGCCAGGCTAATGGGAGGGA...GAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAAATATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CCA 90 bp | ATATATTTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCTGTCCTTTAGAAATGTaGACACTCGGATATGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IYFAENTEMCVASEMDALCPLEM*TLGYAG Trigger: ACCTGCATATCCGAGTGTCCACATTTCTAAAGGACA...GAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAAATATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CCA 90 bp | ATATATTTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCTTTGGCAAGAGGGTTTaGAACAATGTTTTCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IYFAENTEMCVASEMDALFGKRV*NNVFLC Trigger: GCACAGGAAAACATTGTTCCAAACCCTCTTGCCAAA...GAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAAATATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | GTCCAGGGTGGTCTAAGGCAGTCTCTTGAGGGAGGGCTAGGGCGTGCCCATCTGGGGCCACTCGGCTTCTaGATCTCCATCCCTCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: VQGGLRQSLEGGLGRAHLGPLGF*ISIPPI Trigger: AATGGGAGGGATGGAGATCAAGAAGCCGAGTGGCCC...CAGATGGGCACGCCCTAGCCCTCCCTCAAGAGACTGCCTTAGACCACCCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | GTCCAGGGTGGTCTAAGGCAGTCTCTTGAGGGAGGGCTAGGGCGTGCCCATCTGGACGGTGGGAGAGTCTaGGACAAAACCCTTGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VQGGLRQSLEGGLGRAHLDGGRV*DKTLDG Trigger: GCCATCAAGGGTTTTGTCCAAGACTCTCCCACCGTC...CAGATGGGCACGCCCTAGCCCTCCCTCAAGAGACTGCCTTAGACCACCCTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | GTACACAAGGTTACTGGTCCCAGGAGGGAGCATGTAGGACAGGCCTCCTGGCCTGGGCCACTCGGCTTCTaGATCTCCATCCCTCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: VHKVTGPRREHVGQASWPGPLGF*ISIPPI Trigger: AATGGGAGGGATGGAGATCAAGAAGCCGAGTGGCCC...AGGCCAGGAGGCCTGTCCTACATGCTCCCTCCTGGGACCAGTAACCTTGTGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CAA 90 bp | GTCCAGGGTGGTCTAAGGCAGTCTCTTGAGGGAGGGCTAGGGCGTGCCCATCTGATGGCGTCTAAGTGGTaGAAAGTGACCAGCAACACG | + |
|
Preference number: 5 (lower is better) Translates to: VQGGLRQSLEGGLGRAHLMASKW*KVTSNT Trigger: CGTGTTGCTGGTCACTTTCAACCACTTAGACGCCAT...CAGATGGGCACGCCCTAGCCCTCCCTCAAGAGACTGCCTTAGACCACCCTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS TCA 90 bp | TCATCAGGTCGTAGAGCTTATCCATGCTGGCCTGGTTCAGTCGCATaGTGGAGGCATGAGCCAGGCGGTCATACACAGTCCGCAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSGRRAYPCWPGSVA*WRHEPGGHTQSARP Trigger: AGGCCTTGCGGACTGTGTATGACCGCCTGGCTCATGCCTCCATCATGCGACTGAACCAGGCCAGCATGGATAAGCTCTACGACCTGATGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | GTGGCCCATCTCCTAGATCCAGTCCCAGATGACAGTGAAGTCTACGTCTGTGACAGAACTTTGCGGGCCTaGTCTCCGGGGATGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VAHLLDPVPDDSEVYVCDRTLRA*SPGMFW Trigger: CCAGAACATCCCCGGAGACAAGGCCCGCAAAGTTCT...GTCACAGACGTAGACTTCACTGTCATCTGGGACTGGATCTAGGAGATGGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CAA 90 bp | GTCCAGGGTGGTCTAAGGCAGTCTCTTGAGGGAGGGCTAGGGCGTGCCCATCTGTGGACACAGCAGCACTaGATATTTGAAAGCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: VQGGLRQSLEGGLGRAHLWTQQH*IFESHG Trigger: ACCATGGCTTTCAAATATCAAGTGCTGCTGTGTCCA...CAGATGGGCACGCCCTAGCCCTCCCTCAAGAGACTGCCTTAGACCACCCTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS TCA 90 bp | AGCTTCCCATACACTTCTGACAGCTGCCGGAAGGTCTCGTCCACCTaGTGTATGACGGTGGGAGAGTCTTGGACAAAACCCTTGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SFPYTSDSCRKVSST*CMTVGESWTKPLMA Trigger: CGCCATCAAGGGTTTTGTCCAAGACTCTCCCACCGTCATACATCAGGTGGACGAGACCTTCCGGCAGCTGTCAGAAGTGTATGGGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CCA 90 bp | ATGACGGTGGGAGAGTCTTGGACAAAACCCTTGATGGCGTCTAAGTaGTTGAAAGTGACCAGCAACACGTCCTTGGGGCGTGGACACAGC | + |
|
Preference number: 5 (lower is better) Translates to: MTVGESWTKPLMASK*LKVTSNTSLGRGHS Trigger: GCTGTGTCCACGCCCCAAGGACGTGTTGCTGGTCACTTTCAACCACTTAGACGCCATCAAGGGTTTTGTCCAAGACTCTCCCACCGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | GTACTTGAGAGGCAGAAGCAGGCGGATCACTGTGAGTTCCAGGCCAGCATGGTCTACAGCTCCTGGGGTTaGAACAGTTCGTCCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VLERQKQADHCEFQASMVYSSWG*NSSSMN Trigger: GTTCATGGACGAACTGTTCAAACCCCAGGAGCTGTA...GACCATGCTGGCCTGGAACTCACAGTGATCCGCCTGCTTCTGCCTCTCAAGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CAA 90 bp | AGATCCCCAGCCATCCGTGTCCAGGGTGGTCTAAGGCAGTCTCTTGAGGGAGGGCTTTGGCAAGAGGGTTaGGAACAATGTTTTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSPAIRVQGGLRQSLEGGLWQEG*EQCFPV Trigger: CACAGGAAAACATTGTTCCAAACCCTCTTGCCAAAG...CCCTCCCTCAAGAGACTGCCTTAGACCACCCTGGACACGGATGGCTGGGGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS TCA 90 bp | CCAGCAACACGTCCTTGGGGCGTGGACACAGCAGCACTTGATATTTaGAAGCCATGGTCATCAGGTCGTAGAGCTTATCCATGCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PATRPWGVDTAALDI*KPWSSGRRAYPCWP Trigger: AGGCCAGCATGGATAAGCTCTACGACCTGATGACCATGGCTTTCAAATATCAAGTGCTGCTGTGTCCACGCCCCAAGGACGTGTTGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS GCA 90 bp | GTGGACACTCGGATATGCAGGTCTTGGAAGAAGTTGAGCAGTGTCTaGCGGATCAGCTGGAACTCCCCTTCAGAGAGCTTCCCATACACT | + |
|
Preference number: 5 (lower is better) Translates to: VDTRICRSWKKLSSV*RISWNSPSESFPYT Trigger: AGTGTATGGGAAGCTCTCTGAAGGGGAGTTCCAGCTGATCCGGCAGACACTGCTCAACTTCTTCCAAGACCTGCATATCCGAGTGTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | GTACACAAGGTTACTGGTCCCAGGAGGGAGCATGTAGGACAGGCCTCCTGGCCTTGGACACAGCAGCACTaGATATTTGAAAGCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: VHKVTGPRREHVGQASWPWTQQH*IFESHG Trigger: ACCATGGCTTTCAAATATCAAGTGCTGCTGTGTCCA...AGGCCAGGAGGCCTGTCCTACATGCTCCCTCCTGGGACCAGTAACCTTGTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CAA 90 bp | AGGCGGATCACTGTGAGTTCCAGGCCAGCATGGTCACATAGTAAGTACCAGGACAGGTCTTGGAAGAAGTaGAGCAGTGTCTGCCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RRITVSSRPAWSHSKYQDRSWKK*SSVCRI Trigger: GATCCGGCAGACACTGCTCAACTTCTTCCAAGACCT...GTCCTGGTACTTACTATGTGACCATGCTGGCCTGGAACTCACAGTGATCCGCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS GCA 90 bp | CTGTATGCTGATGACTTCATAGGACAACTCCTCCGGCCTGGACAGTaGTGCGTGTTCCTCTTCCTCATCGGTCGTAAACAGATTCAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LYADDFIGQLLRPGQ*CVFLFLIGRKQIQS Trigger: CGACTGAATCTGTTTACGACCGATGAGGAAGAGGAACACGCAGCACTGTCCAGGCCGGAGGAGTTGTCCTATGAAGTCATCAGCATACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CCA 90 bp | ATATGCAGGTCTTGGAAGAAGTTGAGCAGTGTCTGCCGGATCAGCTaGAACTCCCCTTCAGAGAGCTTCCCATACACTTCTGACAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ICRSWKKLSSVCRIS*NSPSESFPYTSDSC Trigger: GCAGCTGTCAGAAGTGTATGGGAAGCTCTCTGAAGGGGAGTTCCAGCTGATCCGGCAGACACTGCTCAACTTCTTCCAAGACCTGCATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CCA 90 bp | TTTTCCTGTGCCCTGGAGGCTGCGTTCTTGGATGTTGCAGACATGTaGGTTTCCACAGGACGACTCGCACTGTACATGTTAGTTCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FSCALEAAFLDVADM*VSTGRLALYMLVPS Trigger: ACTGGGAACTAACATGTACAGTGCGAGTCGTCCTGTGGAAACCCACATGTCTGCAACATCCAAGAACGCAGCCTCCAGGGCACAGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | GAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGGTCGTCGTCCGCAAGGCCTTCTaGGAGTACAGCTCCTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ENTEMCVASEMDALREVVVRKAF*EYSSWG Trigger: ACCCCAGGAGCTGTACTCCAAGAAGGCCTTGCGGAC...GACGACCTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | GCTTGCCTACAGCCTGATTTTAAGGAGGCACTTTCTCAACTGAGGCTCTGGTCTGACGGTGGGAGAGTCTaGGACAAAACCCTTGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: ACLQPDFKEALSQLRLWSDGGRV*DKTLDG Trigger: GCCATCAAGGGTTTTGTCCAAGACTCTCCCACCGTC...AGACCAGAGCCTCAGTTGAGAAAGTGCCTCCTTAAAATCAGGCTGTAGGCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS TCA 90 bp | CCTTTAGAAATGTGGACACTCGGATATGCAGGTCTTGGAAGAAGTTaGGCAGTGTCTGCCGGATCAGCTGGAACTCCCCTTCAGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLEMWTLGYAGLGRS*AVSAGSAGTPLQRA Trigger: AGCTCTCTGAAGGGGAGTTCCAGCTGATCCGGCAGACACTGCTCAACTTCTTCCAAGACCTGCATATCCGAGTGTCCACATTTCTAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS GCA 90 bp | TATGCTGATGACTTCATAGGACAACTCCTCCGGCCTGGACAGTGCTaGGTGTTCCTCTTCCTCATCGGTCGTAAACAGATTCAGTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: YADDFIGQLLRPGQC*VFLFLIGRKQIQSE Trigger: TTCCGACTGAATCTGTTTACGACCGATGAGGAAGAGGAACACGCAGCACTGTCCAGGCCGGAGGAGTTGTCCTATGAAGTCATCAGCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CCA 90 bp | AGGCGGTCATACACAGTCCGCAAGGCCTTCTTGGAGTACAGCTCCTaGGGTTTGAACAGTTCGTCCATGAACTTCCTGTTGAACATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RRSYTVRKAFLEYSS*GLNSSSMNFLLNMV Trigger: AACCATGTTCAACAGGAAGTTCATGGACGAACTGTTCAAACCCCAGGAGCTGTACTCCAAGAAGGCCTTGCGGACTGTGTATGACCGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CCA 90 bp | GCTCTTCTTTGGCAAGAGGGTTTGGAACAATGTTTTCCTGTGCCCTaGAGGCTGCGTTCTTGGATGTTGCAGACATGTGGGTTTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: ALLWQEGLEQCFPVP*RLRSWMLQTCGFPQ Trigger: CTGTGGAAACCCACATGTCTGCAACATCCAAGAACGCAGCCTCCAGGGCACAGGAAAACATTGTTCCAAACCCTCTTGCCAAAGAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CCA 90 bp | TCTCCATCCCTCCCATTAGCCTGGCCAAGAAATTCAGCTCTTCTTTaGCAAGAGGGTTTGGAACAATGTTTTCCTGTGCCCTGGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSLPLAWPRNSALL*QEGLEQCFPVPWRL Trigger: CAGCCTCCAGGGCACAGGAAAACATTGTTCCAAACCCTCTTGCCAAAGAAGAGCTGAATTTCTTGGCCAGGCTAATGGGAGGGATGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | ACATGCTTGGAAGAACAAACATCTGACCCCCAGGTGCTCTCCCTGGGCCTCTCACTTTGGCAAGAGGGTTaGGAACAATGTTTTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TCLEEQTSDPQVLSLGLSLWQEG*EQCFPV Trigger: CACAGGAAAACATTGTTCCAAACCCTCTTGCCAAAG...TGAGAGGCCCAGGGAGAGCACCTGGGGGTCAGATGTTTGTTCTTCCAAGCATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CAA 90 bp | TTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGGTCCGCAAGGCCTTCTaGGAGTACAGCTCCTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FAENTEMCVASEMDALREVRKAF*EYSSWG Trigger: ACCCCAGGAGCTGTACTCCAAGAAGGCCTTGCGGAC...CTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS TCA 90 bp | CTGGGGTTTGAACAGTTCGTCCATGAACTTCCTGTTGAACATGGTTaGAATGATGTCGTTCAGAACTTTGCGGGCCTTGTCTCCGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LGFEQFVHELPVEHG*NDVVQNFAGLVSGD Trigger: ATCCCCGGAGACAAGGCCCGCAAAGTTCTGAACGACATCATTTCAACCATGTTCAACAGGAAGTTCATGGACGAACTGTTCAAACCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS TCA 90 bp | GGAACAGGCCCCGACACTGGCAACACAAAGCGACCATTAGAGTTCTaGACTTTGTCCTTTAGAAATGTGGACACTCGGATATGCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GTGPDTGNTKRPLEF*TLSFRNVDTRICRS Trigger: AGACCTGCATATCCGAGTGTCCACATTTCTAAAGGACAAAGTTCAGAACTCTAATGGTCGCTTTGTGTTGCCAGTGTCGGGGCCTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS GCA 90 bp | ATTCAGCTCTTCTTTGGCAAGAGGGTTTGGAACAATGTTTTCCTGTaGCCTGGAGGCTGCGTTCTTGGATGTTGCAGACATGTGGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IQLFFGKRVWNNVFL*PGGCVLGCCRHVGF Trigger: GAAACCCACATGTCTGCAACATCCAAGAACGCAGCCTCCAGGGCACAGGAAAACATTGTTCCAAACCCTCTTGCCAAAGAAGAGCTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | GCTTGCCTACAGCCTGATTTTAAGGAGGCACTTTCTCAACTGAGGCTCTGGTCTTCGGATATGCAGGTCTaGGAAGAAGTTGAGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ACLQPDFKEALSQLRLWSSDMQV*EEVEQC Trigger: ACACTGCTCAACTTCTTCCAAGACCTGCATATCCGA...AGACCAGAGCCTCAGTTGAGAAAGTGCCTCCTTAAAATCAGGCTGTAGGCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CAA 90 bp | TTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGTCATCTTTGCGGGCCTaGTCTCCGGGGATGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FAENTEMCVASEMDALRESSLRA*SPGMFW Trigger: CCAGAACATCCCCGGAGACAAGGCCCGCAAAGATGA...CTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | GAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGGTCGTCTCGGATATGCAGGTCTaGGAAGAAGTTGAGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ENTEMCVASEMDALREVVSDMQV*EEVEQC Trigger: ACACTGCTCAACTTCTTCCAAGACCTGCATATCCGA...GACGACCTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | GCTTGCCTACAGCCTGATTTTAAGGAGGCACTTTCTCAACTGAGGCTCTGGTCTAAATTCAGCTCTTCTTaGGCAAGAGGGTTTGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: ACLQPDFKEALSQLRLWSKFSSS*ARGFGT Trigger: TGTTCCAAACCCTCTTGCCAAAGAAGAGCTGAATTT...AGACCAGAGCCTCAGTTGAGAAAGTGCCTCCTTAAAATCAGGCTGTAGGCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CAA 90 bp | TTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGTACAGCTCCTGGGGTTaGAACAGTTCGTCCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FAENTEMCVASEMDALREYSSWG*NSSSMN Trigger: GTTCATGGACGAACTGTTCAAACCCCAGGAGCTGTA...CTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | ATATATTTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCTCTGTCCATTCATCTTaGCGGGCCTTGTCTCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: IYFAENTEMCVASEMDALSVHSS*RALSPG Trigger: CCCCGGAGACAAGGCCCGCAAAGATGAATGGACAGA...GAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAAATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | ATATATTTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCAGGTCTTGGAAGAAGTaGAGCAGTGTCTGCCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: IYFAENTEMCVASEMDALRSWKK*SSVCRI Trigger: GATCCGGCAGACACTGCTCAACTTCTTCCAAGACCT...GAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAAATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | TTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGAAATTCAGCTCTTCTTaGGCAAGAGGGTTTGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: FAENTEMCVASEMDALREKFSSS*ARGFGT Trigger: TGTTCCAAACCCTCTTGCCAAAGAAGAGCTGAATTT...CTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | TTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCCGAGAGTCCATGAACTTCCTGTaGAACATGGTTGAAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: FAENTEMCVASEMDALRESMNFL*NMVEMM Trigger: CATCATTTCAACCATGTTCAACAGGAAGTTCATGGA...CTCTCGGAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS-3UTR CAA 90 bp | TGCCCCATTTCCTGTCTTAATGAATTGCCTCAAAACAAACAAGAGCATATTTTTATGGCGTCTAAGTGGTaGAAAGTGACCAGCAACACG | + |
|
Preference number: 5 (lower is better) Translates to: CPISCLNELPQNKQEHIFMASKW*KVTSNT Trigger: CGTGTTGCTGGTCACTTTCAACCACTTAGACGCCAT...AAAAATATGCTCTTGTTTGTTTTGAGGCAATTCATTAAGACAGGAAATGGGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS-3UTR CAA 90 bp | ATATATTTTGCTGAAAATACAGAAATGTGTGTGGCTTCAGAAATGGATGCTCTCTCCATGAACTTCCTGTaGAACATGGTTGAAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: IYFAENTEMCVASEMDALSMNFL*NMVEMM Trigger: CATCATTTCAACCATGTTCAACAGGAAGTTCATGGA...GAGAGCATCCATTTCTGAAGCCACACACATTTCTGTATTTTCAGCAAAATATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS TCA 72 bp | CGTAGAGCTTATCCATGCTGGCCTGGTTCAGTCGCATaGTGGAGGCATGAGCCAGGCGGTCATACACAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRAYPCWPGSVA*WRHEPGGHTQS Trigger: GGACTGTGTATGACCGCCTGGCTCATGCCTCCATCATGCGACTGAACCAGGCCAGCATGGATAAGCTCTACG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CAA 90 bp | ACGGTGGGAGAGTCTTGGACAAAACCCTTGATGGCGTCTAAGTGGTaGAAAGTGACCAGCAACACGTCCTTGGGGCGTGGACACAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TVGESWTKPLMASKW*KVTSNTSLGRGHSS Trigger: GCTGCTGTGTCCACGCCCCAAGGACGTGTTGCTGGTCACTTTCAACCACTTAGACGCCATCAAGGGTTTTGTCCAAGACTCTCCCACCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS GCA 72 bp | GTTTTCCTGTGCCCTGGAGGCTGCGTTCTTGGATGTTaGAGACATGTGGGTTTCCACAGGACGACTCGCACT | + |
|
Preference number: 6 (lower is better) Translates to: VFLCPGGCVLGC*RHVGFHRTTRT Trigger: AGTGCGAGTCGTCCTGTGGAAACCCACATGTCTGCAACATCCAAGAACGCAGCCTCCAGGGCACAGGAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS GCA 72 bp | AGCAAGTCGTCTCCCTTACTGGTGTTCTGCTCCAGCTaGTCTGTGATCTCAAACTCACCCATGATCCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SKSSPLLVFCSS*SVISNSPMIRA Trigger: GGCCCGGATCATGGGTGAGTTTGAGATCACAGAGCAGCTGGAGCAGAACACCAGTAAGGGAGACGACTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CAA 72 bp | ATGGTTGAAATGATGTCGTTCAGAACTTTGCGGGCCTaGTCTCCGGGGATGTTCTGGGCCCTCAGTCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: MVEMMSFRTLRA*SPGMFWALSRW Trigger: CCAGCGACTGAGGGCCCAGAACATCCCCGGAGACAAGGCCCGCAAAGTTCTGAACGACATCATTTCAACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
||
| CDS TCA 72 bp | TACACTTCTGACAGCTGCCGGAAGGTCTCGTCCACCTaGTGTATGACGGTGGGAGAGTCTTGGACAAAACCC | + |
|
Preference number: 6 (lower is better) Translates to: YTSDSCRKVSST*CMTVGESWTKP Trigger: GGGTTTTGTCCAAGACTCTCCCACCGTCATACATCAGGTGGACGAGACCTTCCGGCAGCTGTCAGAAGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS TCA 72 bp | CTGGAACTCCCCTTCAGAGAGCTTCCCATACACTTCTaGCAGCTGCCGGAAGGTCTCGTCCACCTGATGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LELPFRELPIHF*QLPEGLVHLMY Trigger: ATACATCAGGTGGACGAGACCTTCCGGCAGCTGTCAGAAGTGTATGGGAAGCTCTCTGAAGGGGAGTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS GCA 72 bp | CGGATATGCAGGTCTTGGAAGAAGTTGAGCAGTGTCTaGCGGATCAGCTGGAACTCCCCTTCAGAGAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RICRSWKKLSSV*RISWNSPSESF Trigger: GAAGCTCTCTGAAGGGGAGTTCCAGCTGATCCGGCAGACACTGCTCAACTTCTTCCAAGACCTGCATATCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS GCA 72 bp | GATGACTTCATAGGACAACTCCTCCGGCCTGGACAGTaGTGCGTGTTCCTCTTCCTCATCGGTCGTAAACAG | + |
|
Preference number: 6 (lower is better) Translates to: DDFIGQLLRPGQ*CVFLFLIGRKQ Trigger: CTGTTTACGACCGATGAGGAAGAGGAACACGCAGCACTGTCCAGGCCGGAGGAGTTGTCCTATGAAGTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS TCA 72 bp | ATGTGGACACTCGGATATGCAGGTCTTGGAAGAAGTTaGGCAGTGTCTGCCGGATCAGCTGGAACTCCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: MWTLGYAGLGRS*AVSAGSAGTPL Trigger: AAGGGGAGTTCCAGCTGATCCGGCAGACACTGCTCAACTTCTTCCAAGACCTGCATATCCGAGTGTCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS GCA 72 bp | GACTTCATAGGACAACTCCTCCGGCCTGGACAGTGCTaGGTGTTCCTCTTCCTCATCGGTCGTAAACAGATT | + |
|
Preference number: 6 (lower is better) Translates to: DFIGQLLRPGQC*VFLFLIGRKQI Trigger: AATCTGTTTACGACCGATGAGGAAGAGGAACACGCAGCACTGTCCAGGCCGGAGGAGTTGTCCTATGAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS GCA 72 bp | ATCATGGCCAGCAAGTCGTCTCCCTTACTGGTGTTCTaGTCCAGCTGCTCTGTGATCTCAAACTCACCCATG | + |
|
Preference number: 6 (lower is better) Translates to: IMASKSSPLLVF*SSCSVISNSPM Trigger: CATGGGTGAGTTTGAGATCACAGAGCAGCTGGAGCAGAACACCAGTAAGGGAGACGACTTGCTGGCCATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CCA 72 bp | GGAGAGTCTTGGACAAAACCCTTGATGGCGTCTAAGTaGTTGAAAGTGACCAGCAACACGTCCTTGGGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: GESWTKPLMASK*LKVTSNTSLGR Trigger: ACGCCCCAAGGACGTGTTGCTGGTCACTTTCAACCACTTAGACGCCATCAAGGGTTTTGTCCAAGACTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CCA 72 bp | TGGCAAGAGGGTTTGGAACAATGTTTTCCTGTGCCCTaGAGGCTGCGTTCTTGGATGTTGCAGACATGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: WQEGLEQCFPVP*RLRSWMLQTCG Trigger: CCCACATGTCTGCAACATCCAAGAACGCAGCCTCCAGGGCACAGGAAAACATTGTTCCAAACCCTCTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CCA 72 bp | TTCCTCATCGGTCGTAAACAGATTCAGTCGGAATCCTaGTTCAGGGCCACTCGGCTTCTTGATCTCCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: FLIGRKQIQSES*FRATRLLDLHP Trigger: GGGATGGAGATCAAGAAGCCGAGTGGCCCTGAACCAGGATTCCGACTGAATCTGTTTACGACCGATGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CAA 72 bp | CAGCAACACGTCCTTGGGGCGTGGACACAGCAGCACTaGATATTTGAAAGCCATGGTCATCAGGTCGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QQHVLGAWTQQH*IFESHGHQVVE Trigger: CTCTACGACCTGATGACCATGGCTTTCAAATATCAAGTGCTGCTGTGTCCACGCCCCAAGGACGTGTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CAA 72 bp | GAGTCTTGGACAAAACCCTTGATGGCGTCTAAGTGGTaGAAAGTGACCAGCAACACGTCCTTGGGGCGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ESWTKPLMASKW*KVTSNTSLGRG Trigger: TCCACGCCCCAAGGACGTGTTGCTGGTCACTTTCAACCACTTAGACGCCATCAAGGGTTTTGTCCAAGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CAA 72 bp | AATGTGGACACTCGGATATGCAGGTCTTGGAAGAAGTaGAGCAGTGTCTGCCGGATCAGCTGGAACTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: NVDTRICRSWKK*SSVCRISWNSP Trigger: AGGGGAGTTCCAGCTGATCCGGCAGACACTGCTCAACTTCTTCCAAGACCTGCATATCCGAGTGTCCACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CAA 90 bp | TCCTTTAGAAATGTGGACACTCGGATATGCAGGTCTTGGAAGAAGTaGAGCAGTGTCTGCCGGATCAGCTGGAACTCCCCTTCAGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SFRNVDTRICRSWKK*SSVCRISWNSPSES Trigger: GCTCTCTGAAGGGGAGTTCCAGCTGATCCGGCAGACACTGCTCAACTTCTTCCAAGACCTGCATATCCGAGTGTCCACATTTCTAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CAA 90 bp | GTAAACAGATTCAGTCGGAATCCTGGTTCAGGGCCACTCGGCTTCTaGATCTCCATCCCTCCCATTAGCCTGGCCAAGAAATTCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VNRFSRNPGSGPLGF*ISIPPISLAKKFSS Trigger: AGAGCTGAATTTCTTGGCCAGGCTAATGGGAGGGATGGAGATCAAGAAGCCGAGTGGCCCTGAACCAGGATTCCGACTGAATCTGTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS TCA 72 bp | CGTCCTTGGGGCGTGGACACAGCAGCACTTGATATTTaGAAGCCATGGTCATCAGGTCGTAGAGCTTATCCA | + |
|
Preference number: 6 (lower is better) Translates to: RPWGVDTAALDI*KPWSSGRRAYP Trigger: TGGATAAGCTCTACGACCTGATGACCATGGCTTTCAAATATCAAGTGCTGCTGTGTCCACGCCCCAAGGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS GCA 72 bp | AGGGTTTGGAACAATGTTTTCCTGTGCCCTGGAGGCTaGGTTCTTGGATGTTGCAGACATGTGGGTTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RVWNNVFLCPGG*VLGCCRHVGFH Trigger: GTGGAAACCCACATGTCTGCAACATCCAAGAACGCAGCCTCCAGGGCACAGGAAAACATTGTTCCAAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
||
| CDS CCA 72 bp | GTGGTTGAAAGTGACCAGCAACACGTCCTTGGGGCGTaGACACAGCAGCACTTGATATTTGAAAGCCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: VVESDQQHVLGA*TQQHLIFESHG Trigger: ACCATGGCTTTCAAATATCAAGTGCTGCTGTGTCCACGCCCCAAGGACGTGTTGCTGGTCACTTTCAACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
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| CDS CCA 72 bp | TCTTGGAAGAAGTTGAGCAGTGTCTGCCGGATCAGCTaGAACTCCCCTTCAGAGAGCTTCCCATACACTTCT | + |
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Preference number: 6 (lower is better) Translates to: SWKKLSSVCRIS*NSPSESFPYTS Trigger: AGAAGTGTATGGGAAGCTCTCTGAAGGGGAGTTCCAGCTGATCCGGCAGACACTGCTCAACTTCTTCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
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| CDS CCA 72 bp | AGGAACTTCAGTTCCCCAGGGAACAGGCCCCGACACTaGCAACACAAAGCGACCATTAGAGTTCTGAACTTT | + |
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Preference number: 6 (lower is better) Translates to: RNFSSPGNRPRH*QHKATIRVLNF Trigger: AAAGTTCAGAACTCTAATGGTCGCTTTGTGTTGCCAGTGTCGGGGCCTGTTCCCTGGGGAACTGAAGTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
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| CDS CAA 90 bp | GAAAGTGACCAGCAACACGTCCTTGGGGCGTGGACACAGCAGCACTaGATATTTGAAAGCCATGGTCATCAGGTCGTAGAGCTTATCCAT | + |
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Preference number: 6 (lower is better) Translates to: ESDQQHVLGAWTQQH*IFESHGHQVVELIH Trigger: ATGGATAAGCTCTACGACCTGATGACCATGGCTTTCAAATATCAAGTGCTGCTGTGTCCACGCCCCAAGGACGTGTTGCTGGTCACTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
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| CDS CAA 90 bp | ATCTCCATCCCTCCCATTAGCCTGGCCAAGAAATTCAGCTCTTCTTaGGCAAGAGGGTTTGGAACAATGTTTTCCTGTGCCCTGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: ISIPPISLAKKFSSS*ARGFGTMFSCALEA Trigger: AGCCTCCAGGGCACAGGAAAACATTGTTCCAAACCCTCTTGCCAAAGAAGAGCTGAATTTCTTGGCCAGGCTAATGGGAGGGATGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
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| CDS CAA 90 bp | TGTGATCTCAAACTCACCCATGATCCGGGCCAACTCCTCATTCCGTaGCTGGTCCTGTGTAGCCTGTATGCTGATGACTTCATAGGACAA | + |
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Preference number: 6 (lower is better) Translates to: CDLKLTHDPGQLLIP*LVLCSLYADDFIGQ Trigger: TTGTCCTATGAAGTCATCAGCATACAGGCTACACAGGACCAGCAACGGAATGAGGAGTTGGCCCGGATCATGGGTGAGTTTGAGATCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
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| CDS CCA 72 bp | TCCTTTAGAAATGTGGACACTCGGATATGCAGGTCTTaGAAGAAGTTGAGCAGTGTCTGCCGGATCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SFRNVDTRICRS*KKLSSVCRISW Trigger: CCAGCTGATCCGGCAGACACTGCTCAACTTCTTCCAAGACCTGCATATCCGAGTGTCCACATTTCTAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
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| CDS GCA 72 bp | TTCTTTGGCAAGAGGGTTTGGAACAATGTTTTCCTGTaGCCTGGAGGCTGCGTTCTTGGATGTTGCAGACAT | + |
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Preference number: 6 (lower is better) Translates to: FFGKRVWNNVFL*PGGCVLGCCRH Trigger: ATGTCTGCAACATCCAAGAACGCAGCCTCCAGGGCACAGGAAAACATTGTTCCAAACCCTCTTGCCAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
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| CDS CAA 90 bp | TCATACACAGTCCGCAAGGCCTTCTTGGAGTACAGCTCCTGGGGTTaGAACAGTTCGTCCATGAACTTCCTGTTGAACATGGTTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: SYTVRKAFLEYSSWG*NSSSMNFLLNMVEM Trigger: CATTTCAACCATGTTCAACAGGAAGTTCATGGACGAACTGTTCAAACCCCAGGAGCTGTACTCCAAGAAGGCCTTGCGGACTGTGTATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
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| CDS TCA 72 bp | GAACAGTTCGTCCATGAACTTCCTGTTGAACATGGTTaGAATGATGTCGTTCAGAACTTTGCGGGCCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: EQFVHELPVEHG*NDVVQNFAGLV Trigger: GACAAGGCCCGCAAAGTTCTGAACGACATCATTTCAACCATGTTCAACAGGAAGTTCATGGACGAACTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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| CDS CAA 72 bp | CCATGCCGGAATTTCATCTTCTTCACCTCTTTGCCTTaGACACTGAACACTCTAATGACTCCAGGAACTTCA | + |
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Preference number: 6 (lower is better) Translates to: PCRNFIFFTSLP*TLNTLMTPGTS Trigger: TGAAGTTCCTGGAGTCATTAGAGTGTTCAGTGTCAAAGGCAAAGAGGTGAAGAAGATGAAATTCCGGCATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035497.5 ENSMUST00000143712.3 |
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| CDS CAA 72 bp | TCCTGGGGTTTGAACAGTTCGTCCATGAACTTCCTGTaGAACATGGTTGAAATGATGTCGTTCAGAACTCGT | + |
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Preference number: 6 (lower is better) Translates to: SWGLNSSSMNFL*NMVEMMSFRTR Trigger: ACGAGTTCTGAACGACATCATTTCAACCATGTTCAACAGGAAGTTCATGGACGAACTGTTCAAACCCCAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143712.3 |
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| CDS TCA 72 bp | GAACAGTTCGTCCATGAACTTCCTGTTGAACATGGTTaGAATGATGTCGTTCAGAACTCGTTTTCTGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: EQFVHELPVEHG*NDVVQNSFSVH Trigger: GTGGACAGAAAACGAGTTCTGAACGACATCATTTCAACCATGTTCAACAGGAAGTTCATGGACGAACTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143712.3 |
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| CDS CAA 72 bp | TCCTGGGGTTTGAACAGTTCGTCCATGAACTTCCTGTaGAACATGGTTGAAATGATGTCGTTCAGAACTTTG | + |
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Preference number: 6 (lower is better) Translates to: SWGLNSSSMNFL*NMVEMMSFRTL Trigger: CAAAGTTCTGAACGACATCATTTCAACCATGTTCAACAGGAAGTTCATGGACGAACTGTTCAAACCCCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035497.5 |
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