Pregenerated sensors for OSBPL8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020189Ensembl transcript IDs: ENSMUST00000095310.3, ENSMUST00000105275.9, ENSMUST00000238838.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTGGTATCAGAATACGTCACAGCACACTGTAGAACACAGGAACTaGTGTCAGGGAAGAGCTCTTTATACACACGTGGGTCTACGATAC | + |
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Preference number: 1 (lower is better) Translates to: HWYQNTSQHTVEHRN*CQGRALYTHVGLRY Trigger: GTATCGTAGACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTGTGCTGTGACGTATTCTGATACCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| 3UTR GCA 90 bp | ATAAGGACACCTGTATTCATCAGAAGAGGCTTTCAGTGTGAGCACTaGAGCTGTCCTCTCACAGCAGAGTTAGCTTTCCTTGTAGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: IRTPVFIRRGFQCEH*SCPLTAELAFLVAQ Trigger: TTGAGCTACAAGGAAAGCTAACTCTGCTGTGAGAGGACAGCTGCAGTGCTCACACTGAAAGCCTCTTCTGATGAATACAGGTGTCCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR GCA 90 bp | ACAAATCTGCCTGAGCAGAGCAGAAAGACTTGTACAGAACTGGCTTaGCACAGGATGATGGGAGGAGATGACAAACTTCATAACTTGACA | + |
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Preference number: 1 (lower is better) Translates to: TNLPEQSRKTCTELA*HRMMGGDDKLHNLT Trigger: TGTCAAGTTATGAAGTTTGTCATCTCCTCCCATCATCCTGTGGCAAGCCAGTTCTGTACAAGTCTTTCTGCTCTGCTCAGGCAGATTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR GCA 90 bp | TTAAGGGAATGCAGCTGTCAACTGAGCTGTGACAAAGATGACCACTaGCGCTTTCCAAGTCATACTAGAGACAGAAGTGGTAGGAATTAC | + |
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Preference number: 1 (lower is better) Translates to: LRECSCQLSCDKDDH*RFPSHTRDRSGRNY Trigger: GTAATTCCTACCACTTCTGTCTCTAGTATGACTTGGAAAGCGGCAGTGGTCATCTTTGTCACAGCTCAGTTGACAGCTGCATTCCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR TCA 90 bp | AAACACCGAATCATCAGGATTTCACATAACCTACTTAAACACCTCTaGCCGTTCCTTTTCAGCAAGTGCTTAAGTTGGGATTGTAACATA | + |
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Preference number: 1 (lower is better) Translates to: KHRIIRISHNLLKHL*PFLFSKCLSWDCNI Trigger: TATGTTACAATCCCAACTTAAGCACTTGCTGAAAAGGAACGGTCAGAGGTGTTTAAGTAGGTTATGTGAAATCCTGATGATTCGGTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGTTAACCCTTAGATCAGATTGTTCGAGGTCTGTCACACACTGGCTAAACCTACTTAAACACCTCTaGCCGTTCCTTTTCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: RKLTLRSDCSRSVTHWLNLLKHL*PFLFSK Trigger: CTTGCTGAAAAGGAACGGTCAGAGGTGTTTAAGTAG...GTTTAGCCAGTGTGTGACAGACCTCGAACAATCTGATCTAAGGGTTAACTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR-3UTR TCA 90 bp | AAGTTAAATCGATTGCTGCAGCACACTAACACCACACATGCCTGTTATTGTCTTAGGAACAAATCTGCCTaGGCAGAGCAGAAAGACTTG | + |
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Preference number: 2 (lower is better) Translates to: KLNRLLQHTNTTHACYCLRNKSA*AEQKDL Trigger: CAAGTCTTTCTGCTCTGCTCAGGCAGATTTGTTCCT...AAGACAATAACAGGCATGTGTGGTGTTAGTGTGCTGCAGCAATCGATTTAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR CAA 90 bp | AGTCATACTAGAGACAGAAGTGGTAGGAATTACAAGTTAAATCGATaGCTGCAGCACACTAACACCACACATGCCTGTTATTGTCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: SHTRDRSGRNYKLNR*LQHTNTTHACYCLV Trigger: GACAAGACAATAACAGGCATGTGTGGTGTTAGTGTGCTGCAGCAATCGATTTAACTTGTAATTCCTACCACTTCTGTCTCTAGTATGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR-3UTR GCA 90 bp | TATCTACCATTTTCCCACTGTAATTCCCTAATGAAAGTTATATGCCGGTCTTCTGTAGAACACAGGAACTaGTGTCAGGGAAGAGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: YLPFSHCNSLMKVICRSSVEHRN*CQGRAL Trigger: AAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTAC...AGAAGACCGGCATATAACTTTCATTAGGGAATTACAGTGGGAAAATGGTAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| 3UTR CAA 90 bp | CTGGCTTGCCACAGGATGATGGGAGGAGATGACAAACTTCATAACTaGACATTCTCCAATGCTCAACTTATTGCACATTTAAGCAATTTT | + |
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Preference number: 2 (lower is better) Translates to: LACHRMMGGDDKLHN*TFSNAQLIAHLSNF Trigger: AAAATTGCTTAAATGTGCAATAAGTTGAGCATTGGAGAATGTCAAGTTATGAAGTTTGTCATCTCCTCCCATCATCCTGTGGCAAGCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR-3UTR TCA 90 bp | TTAACCCTTAGATCAGATTGTTCGAGGTCTGTCACACACTGGCTAAACTCAAGTACAAACTTCATAACTTaGCATTCTCCAATGCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: LTLRSDCSRSVTHWLNSSTNFIT*HSPMLN Trigger: GTTGAGCATTGGAGAATGTCAAGTTATGAAGTTTGT...ACTTGAGTTTAGCCAGTGTGTGACAGACCTCGAACAATCTGATCTAAGGGTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR-3UTR TCA 90 bp | CGGCATTACTGTTTACATATTCTTCAGCTAGATAAAAGGAAACACAGTGACCCAACGGCATCTTTGTTATaGACACTGGTATCAGAATAC | + |
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Preference number: 2 (lower is better) Translates to: RHYCLHILQLDKRKHSDPTASLL*TLVSEY Trigger: GTATTCTGATACCAGTGTTCATAACAAAGATGCCGT...TGGGTCACTGTGTTTCCTTTTATCTAGCTGAAGAATATGTAAACAGTAATGCCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR-3UTR GCA 90 bp | AAGTTAAATCGATTGCTGCAGCACACTAACACCACACATGCCTGTTATTGTCTTCTTGACATTCTCCAATaGTCAACTTATTGCACATTT | + |
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Preference number: 2 (lower is better) Translates to: KLNRLLQHTNTTHACYCLLDILQ*STYCTF Trigger: AAATGTGCAATAAGTTGAGCATTGGAGAATGTCAAG...AAGACAATAACAGGCATGTGTGGTGTTAGTGTGCTGCAGCAATCGATTTAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR-3UTR CCA 90 bp | ACTAACACCACACATGCCTGTTATTGTCTTGTCTTAGCCAGCAATATCTCACTATTACCTTTCCAGTCGTaGATATCAACACAAATAAAG | + |
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Preference number: 2 (lower is better) Translates to: TNTTHACYCLVLASNISLLPFQS*ISTQIK Trigger: CTTTATTTGTGTTGATATCCACGACTGGAAAGGTAA...TAGTGAGATATTGCTGGCTAAGACAAGACAATAACAGGCATGTGTGGTGTTAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR GCA 72 bp | CAGAATACGTCACAGCACACTGTAGAACACAGGAACTaGTGTCAGGGAAGAGCTCTTTATACACACGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: QNTSQHTVEHRN*CQGRALYTHVG Trigger: ACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTGTGCTGTGACGTATTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| 3UTR GCA 72 bp | CCTGTATTCATCAGAAGAGGCTTTCAGTGTGAGCACTaGAGCTGTCCTCTCACAGCAGAGTTAGCTTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: PVFIRRGFQCEH*SCPLTAELAFL Trigger: AAGGAAAGCTAACTCTGCTGTGAGAGGACAGCTGCAGTGCTCACACTGAAAGCCTCTTCTGATGAATACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR GCA 72 bp | TGCAGCTGTCAACTGAGCTGTGACAAAGATGACCACTaGCGCTTTCCAAGTCATACTAGAGACAGAAGTGGT | + |
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Preference number: 3 (lower is better) Translates to: CSCQLSCDKDDH*RFPSHTRDRSG Trigger: ACCACTTCTGTCTCTAGTATGACTTGGAAAGCGGCAGTGGTCATCTTTGTCACAGCTCAGTTGACAGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR GCA 72 bp | AGGATTGTATCTCACAAGGCCAACTTTTTAAGGGAATaGAGCTGTCAACTGAGCTGTGACAAAGATGACCAC | + |
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Preference number: 3 (lower is better) Translates to: RIVSHKANFLRE*SCQLSCDKDDH Trigger: GTGGTCATCTTTGTCACAGCTCAGTTGACAGCTGCATTCCCTTAAAAAGTTGGCCTTGTGAGATACAATCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR TCA 72 bp | ATCATCAGGATTTCACATAACCTACTTAAACACCTCTaGCCGTTCCTTTTCAGCAAGTGCTTAAGTTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: IIRISHNLLKHL*PFLFSKCLSWD Trigger: ATCCCAACTTAAGCACTTGCTGAAAAGGAACGGTCAGAGGTGTTTAAGTAGGTTATGTGAAATCCTGATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR-3UTR CAA 90 bp | TATCTACCATTTTCCCACTGTAATTCCCTAATGAAAGTTATATGCCGGTCTTCTAAAGAGCAAGCCAATTaGAACAATGGTCCCAGATCA | + |
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Preference number: 3 (lower is better) Translates to: YLPFSHCNSLMKVICRSSKEQAN*NNGPRS Trigger: TGATCTGGGACCATTGTTCAAATTGGCTTGCTCTTT...AGAAGACCGGCATATAACTTTCATTAGGGAATTACAGTGGGAAAATGGTAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| 3UTR TCA 72 bp | CAGGTGAGAACACACTTACATCCTATCATACAAAACTaGCCAATGCTAGTGCTTGACTTTATAAACCCATTA | + |
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Preference number: 3 (lower is better) Translates to: QVRTHLHPIIQN*PMLVLDFINPL Trigger: TAATGGGTTTATAAAGTCAAGCACTAGCATTGGTCAGTTTTGTATGATAGGATGTAAGTGTGTTCTCACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| 3UTR CCA 72 bp | ACCCTTAGATCAGATTGTTCGAGGTCTGTCACACACTaGCTAAACTCAAGTTCAATTATATGTTGTTTAAAG | + |
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Preference number: 3 (lower is better) Translates to: TLRSDCSRSVTH*LNSSSIICCLK Trigger: CTTTAAACAACATATAATTGAACTTGAGTTTAGCCAGTGTGTGACAGACCTCGAACAATCTGATCTAAGGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | ACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTCTACGATAGAAGGCTGGCGGGGCTaGGAGAAGGCTGAGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: TQELLSGKSSLYTRGSTIEGWRG*EKAEAD Trigger: ATCTGCCTCAGCCTTCTCTCAGCCCCGCCAGCCTTC...TATCGTAGACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | ACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTCTACGATACTGGGCTGAGAGAAGGCTaGGGCAGATCTCTAGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: TGTAVREELFIHTWVYDTGLREG*GRSLVG Trigger: CCCAACTAGAGATCTGCCTCAGCCTTCTCTCAGCCC...AGTATCGTAGACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | ACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTCTACGATACTCACGTGTGTGCTGTCTaGGGAGATGCTCAGGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: TGTAVREELFIHTWVYDTHVCAV*GDAQVV Trigger: CACGACCTGAGCATCTCCTCAGACAGCACACACGTG...AGTATCGTAGACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | GGGTCTACGATACTCACGTGTAGGCACAGTCTCATACAAGTGTTCTGGCACTTACACGTGTGTGCTGTCTaGGGAGATGCTCAGGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: GSTILTCRHSLIQVFWHLHVCAV*GDAQVV Trigger: CACGACCTGAGCATCTCCTCAGACAGCACACACGTG...TAAGTGCCAGAACACTTGTATGAGACTGTGCCTACACGTGAGTATCGTAGACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | AGAAAGTTAACCCTTAGATCAGATTGTTCGAGGTCTGTCACACACTGGCTAAACGAAGGCTGGCGGGGCTaGGAGAAGGCTGAGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: RKLTLRSDCSRSVTHWLNEGWRG*EKAEAD Trigger: ATCTGCCTCAGCCTTCTCTCAGCCCCGCCAGCCTTC...GTTTAGCCAGTGTGTGACAGACCTCGAACAATCTGATCTAAGGGTTAACTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| CDS-3UTR GCA 90 bp | ACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTCTACGATATTGAGAGGCCTCACCTaGCTCTCCCAGTTCTTCGTG | + |
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Preference number: 4 (lower is better) Translates to: TQELLSGKSSLYTRGSTILRGLT*LSQFFV Trigger: CACGAAGAACTGGGAGAGGCAGGTGAGGCCTCTCAA...TATCGTAGACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | TTAACCCTTAGATCAGATTGTTCGAGGTCTGTCACACACTGGCTAAACTCAAGTTCTCTGCCTTGGCGCTaGCTCATCTTTCCTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LTLRSDCSRSVTHWLNSSSLPWR*LIFPGV Trigger: GACCCCAGGAAAGATGAGTCAGCGCCAAGGCAGAGA...ACTTGAGTTTAGCCAGTGTGTGACAGACCTCGAACAATCTGATCTAAGGGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| CDS-3UTR CCA 90 bp | GTATCTCACAAGGCCAACTTTTTAAGGGAATGCAGCTGTCAACTGAGCTGTGACGTAGAGGCTGGGTTATaGAGCCAACCGCTTCACCTT | + |
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Preference number: 4 (lower is better) Translates to: VSHKANFLRECSCQLSCDVEAGL*SQPLHL Trigger: AAGGTGAAGCGGTTGGCTCCATAACCCAGCCTCTAC...GTCACAGCTCAGTTGACAGCTGCATTCCCTTAAAAAGTTGGCCTTGTGAGATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| CDS-3UTR CCA 90 bp | ACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTCTACGATATCTGCTCCATGTAGGTaGTCTCCTTTAAGGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TQELLSGKSSLYTRGSTISAPCR*SPLRAP Trigger: TGGAGCCCTTAAAGGAGACCACCTACATGGAGCAGA...TATCGTAGACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CCA 90 bp | ACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTTCTGCTCCATGTAGGTaGTCTCCTTTAAGGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TVEHRNCCQGRALYTHVGSAPCR*SPLRAP Trigger: TGGAGCCCTTAAAGGAGACCACCTACATGGAGCAGA...ACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | GGGTCTACGATACTCACGTGTAGGCACAGTCTCATACAAGTGTTCTGGCACTTACTGGCAGCTTGTCTTTaGGCTTCTTCCAGAACATAC | + |
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Preference number: 4 (lower is better) Translates to: GSTILTCRHSLIQVFWHLLAACL*ASSRTY Trigger: GTATGTTCTGGAAGAAGCTCAAAGACAAGCTGCCAG...TAAGTGCCAGAACACTTGTATGAGACTGTGCCTACACGTGAGTATCGTAGACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR GCA 90 bp | CACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGACTGCCCAAATAGACTaGTCCAAAGGATGGAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: HCRTQELLSGKSSLYTRGTAQID*SKGWKS Trigger: GCTTTTCCATCCTTTGGAGCAGTCTATTTGGGCAGT...CCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | TGTATTTATAGGAGTGACGGCATCTTTGTTATGAACACTGGTATCAGAATACGTTCAAAACCCTGGCTGTaGAGGCTGGCGGGGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: CIYRSDGIFVMNTGIRIRSKPWL*RLAGLR Trigger: TCTCAGCCCCGCCAGCCTTCACAGCCAGGGTTTTGA...ACGTATTCTGATACCAGTGTTCATAACAAAGATGCCGTCACTCCTATAAATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | ACTAACACCACACATGCCTGTTATTGTCTTGTCTTAGCCAGCAATATCTCACTAGACACAGTTTCCGTTTaGGAGGCCTCACCTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: TNTTHACYCLVLASNISLDTVSV*EASPAS Trigger: AGAGGCAGGTGAGGCCTCTCAAACGGAAACTGTGTC...TAGTGAGATATTGCTGGCTAAGACAAGACAATAACAGGCATGTGTGGTGTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | GGTCTTCTGAAGACAATAGTTGACCCTAGATGTATTTATAGGAGTGACGGCATCGCAGATATTGGTGGGTaGTGGGACACCTGTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GLLKTIVDPRCIYRSDGIADIGG*WDTCSA Trigger: TGCTGAACAGGTGTCCCATCACCCACCAATATCTGC...GATGCCGTCACTCCTATAAATACATCTAGGGTCAACTATTGTCTTCAGAAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | CACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGCTTGGTTTTACAGATTaGGCTTCACTTCCAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: HCRTQELLSGKSSLYTRGLGFTD*ASLPEE Trigger: TTCCTCTGGAAGTGAAGCTCAATCTGTAAAACCAAG...CCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR GCA 90 bp | ACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTCTACGATATTTAGGACCCTTCACTaGCCAAATAGACTGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TQELLSGKSSLYTRGSTIFRTLH*PNRLLQ Trigger: TTGGAGCAGTCTATTTGGGCAGTGAAGGGTCCTAAA...TATCGTAGACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR GCA 90 bp | GGTCTTCTGAAGACAATAGTTGACCCTAGATGTATTTATAGGAGTGACGGCATCACAGCGTCACGTGTGTaGTGTCTGAGGAGATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GLLKTIVDPRCIYRSDGITASRV*CLRRCS Trigger: TGAGCATCTCCTCAGACAGCACACACGTGACGCTGT...GATGCCGTCACTCCTATAAATACATCTAGGGTCAACTATTGTCTTCAGAAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CCA 90 bp | GGGTCTACGATACTCACGTGTAGGCACAGTCTCATACAAGTGTTCTGGCACTTAATAAAAGGCAGATATTaGTGGGTGATGGGACACCTG | + |
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Preference number: 4 (lower is better) Translates to: GSTILTCRHSLIQVFWHLIKGRY*WVMGHL Trigger: CAGGTGTCCCATCACCCACCAATATCTGCCTTTTAT...TAAGTGCCAGAACACTTGTATGAGACTGTGCCTACACGTGAGTATCGTAGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CCA 90 bp | ACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTCTGGATGTCAGGTTCTaGGGAAGAATAGCCTTTTAC | + |
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Preference number: 4 (lower is better) Translates to: TVEHRNCCQGRALYTHVGLDVRF*GRIAFY Trigger: GTAAAAGGCTATTCTTCCCCAGAACCTGACATCCAG...ACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | TGCTTTAATAAAGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCGGGCTGAGAGAAGGCTaGGGCAGATCTCTAGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: CFNKEQANLNNGPRSHLIGLREG*GRSLVG Trigger: CCCAACTAGAGATCTGCCTCAGCCTTCTCTCAGCCC...GATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCTTTATTAAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | CAGAATACGTCACAGCACACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTGTTTGTTCTGGGATaGATCCATAAACATCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: QNTSQHTVEHRNCCQGRALFVLG*IHKHRK Trigger: TTTCCGATGTTTATGGATTCATCCCAGAACAAACAG...AGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTGTGCTGTGACGTATTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | CACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGCTGTTTGTTCTGGGATaGATCCATAAACATCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: HCRTQELLSGKSSLYTRGLFVLG*IHKHRK Trigger: TTTCCGATGTTTATGGATTCATCCCAGAACAAACAG...CCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | CACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGCATCTTTCCGGTTACTaGCATAAAAGGCAGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: HCRTQELLSGKSSLYTRGHLSGY*HKRQIL Trigger: CAATATCTGCCTTTTATGTCAGTAACCGGAAAGATG...CCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | GGGTCTACGATACTCACGTGTAGGCACAGTCTCATACAAGTGTTCTGGCACTTACATATGGCATTGTCATaGCGTAATCTTCACCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSTILTCRHSLIQVFWHLHMALS*RNLHLC Trigger: ACAGAGGTGAAGATTACGTCATGACAATGCCATATG...TAAGTGCCAGAACACTTGTATGAGACTGTGCCTACACGTGAGTATCGTAGACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | CACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGAGAATTCCTTTACAGTaGGCATATGGCATTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: HCRTQELLSGKSSLYTRGRIPLQ*AYGIVM Trigger: CATGACAATGCCATATGCTCACTGTAAAGGAATTCT...CCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTCTACGATACTCTTGGTTTTACAGATTaGGCTTCACTTCCAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TGTAVREELFIHTWVYDTLGFTD*ASLPEE Trigger: TTCCTCTGGAAGTGAAGCTCAATCTGTAAAACCAAG...AGTATCGTAGACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR GCA 90 bp | AAGTTAAATCGATTGCTGCAGCACACTAACACCACACATGCCTGTTATTGTCTTACAGCGTCACGTGTGTaGTGTCTGAGGAGATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KLNRLLQHTNTTHACYCLTASRV*CLRRCS Trigger: TGAGCATCTCCTCAGACAGCACACACGTGACGCTGT...AAGACAATAACAGGCATGTGTGGTGTTAGTGTGCTGCAGCAATCGATTTAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTCTACGATACTTCTTGGTCCTTAAAGTaGTGTCTTTCGATCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TGTAVREELFIHTWVYDTSWSLK*CLSISL Trigger: CAGTGAGATCGAAAGACAGCACTTTAAGGACCAAGA...AGTATCGTAGACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATTGAGAGGCCTCACCTaGCTCTCCCAGTTCTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RASQFEQWSQITSNLSCSLRGLT*LSQFFV Trigger: CACGAAGAACTGGGAGAGGCAGGTGAGGCCTCTCAA...TGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | ACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTCTACGATATTGATGGACGTTCAATaGTCTCACAAGCATTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TQELLSGKSSLYTRGSTILMDVQ*SHKHSE Trigger: TTCTGAATGCTTGTGAGATCATTGAACGTCCATCAA...TATCGTAGACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | TGTATTTATAGGAGTGACGGCATCTTTGTTATGAACACTGGTATCAGAATACGTGACACAGTTTCCGTTTaGGAGGCCTCACCTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CIYRSDGIFVMNTGIRIRDTVSV*EASPAS Trigger: AGAGGCAGGTGAGGCCTCTCAAACGGAAACTGTGTC...ACGTATTCTGATACCAGTGTTCATAACAAAGATGCCGTCACTCCTATAAATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | GGTCTTCTGAAGACAATAGTTGACCCTAGATGTATTTATAGGAGTGACGGCATCCTGGCAGCTTGTCTTTaGGCTTCTTCCAGAACATAC | + |
|
Preference number: 4 (lower is better) Translates to: GLLKTIVDPRCIYRSDGILAACL*ASSRTY Trigger: GTATGTTCTGGAAGAAGCTCAAAGACAAGCTGCCAG...GATGCCGTCACTCCTATAAATACATCTAGGGTCAACTATTGTCTTCAGAAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR GCA 90 bp | CAGAATACGTCACAGCACACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTTTTACCACTTTCTTCTaGTGCCTTGTTGGTTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: QNTSQHTVEHRNCCQGRAFTTFF*CLVGLC Trigger: ACATAAACCAACAAGGCAGCAGAAGAAAGTGGTAAA...AGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTGTGCTGTGACGTATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | CAGAATACGTCACAGCACACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTTCAGAGTACAAATCTTaGTCCTTAAAGTGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QNTSQHTVEHRNCCQGRASEYKS*SLKCCL Trigger: AAGACAGCACTTTAAGGACCAAGATTTGTACTCTGA...AGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTGTGCTGTGACGTATTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | CACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTCAGAGTACAAATCTTaGTCCTTAAAGTGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HCRTQELLSGKSSLYTRGSEYKS*SLKCCL Trigger: AAGACAGCACTTTAAGGACCAAGATTTGTACTCTGA...CCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | GGGTCTACGATACTCACGTGTAGGCACAGTCTCATACAAGTGTTCTGGCACTTATGGAACACTAACCATTaGAGTGCGATGTTTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSTILTCRHSLIQVFWHLWNTNH*SAMFHF Trigger: AAAGTGAAACATCGCACTCCAATGGTTAGTGTTCCA...TAAGTGCCAGAACACTTGTATGAGACTGTGCCTACACGTGAGTATCGTAGACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | ACTAACACCACACATGCCTGTTATTGTCTTGTCTTAGCCAGCAATATCTCACTACTTCCAGAGGAATCCTaGATGTCAGGTTCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TNTTHACYCLVLASNISLLPEES*MSGSGE Trigger: TTCCCCAGAACCTGACATCCAGGATTCCTCTGGAAG...TAGTGAGATATTGCTGGCTAAGACAAGACAATAACAGGCATGTGTGGTGTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | ACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTCTACGATACTTCCTTCGTGTACTTaGTTTTACAGATTGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQELLSGKSSLYTRGSTILPSCT*FYRLSF Trigger: GAAGCTCAATCTGTAAAACCAAGTACACGAAGGAAG...TATCGTAGACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | TGTATTTATAGGAGTGACGGCATCTTTGTTATGAACACTGGTATCAGAATACGTGCAGATATTGGTGGGTaGTGGGACACCTGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CIYRSDGIFVMNTGIRIRADIGG*WDTCSA Trigger: TGCTGAACAGGTGTCCCATCACCCACCAATATCTGC...ACGTATTCTGATACCAGTGTTCATAACAAAGATGCCGTCACTCCTATAAATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | CACAGGATGATGGGAGGAGATGACAAACTTCATAACTTGACATTCTCCAATGCTAGTGCCATTCTCCAGTaGGTGGGTCAAGTTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: HRMMGGDDKLHNLTFSNASAILQ*VGQVQI Trigger: TATTTGAACTTGACCCACTCACTGGAGAATGGCACT...AGCATTGGAGAATGTCAAGTTATGAAGTTTGTCATCTCCTCCCATCATCCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR GCA 90 bp | TTAACCCTTAGATCAGATTGTTCGAGGTCTGTCACACACTGGCTAAACTCAAGTGCTTTTGTCACTCGTTaGCAGAGTTTCTCTGATTCG | + |
|
Preference number: 4 (lower is better) Translates to: LTLRSDCSRSVTHWLNSSAFVTR*QSFSDS Trigger: CGAATCAGAGAAACTCTGGCAACGAGTGACAAAAGC...ACTTGAGTTTAGCCAGTGTGTGACAGACCTCGAACAATCTGATCTAAGGGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTTAATAAAGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCGTAGAGGCTGGGTTATaGAGCCAACCGCTTCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: CFNKEQANLNNGPRSHLIVEAGL*SQPLHL Trigger: AAGGTGAAGCGGTTGGCTCCATAACCCAGCCTCTAC...GATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCTTTATTAAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | CACAGGATGATGGGAGGAGATGACAAACTTCATAACTTGACATTCTCCAATGCTCTGGATGTCAGGTTCTaGGGAAGAATAGCCTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: HRMMGGDDKLHNLTFSNALDVRF*GRIAFY Trigger: GTAAAAGGCTATTCTTCCCCAGAACCTGACATCCAG...AGCATTGGAGAATGTCAAGTTATGAAGTTTGTCATCTCCTCCCATCATCCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | AGAAAGTTAACCCTTAGATCAGATTGTTCGAGGTCTGTCACACACTGGCTAAACCCATGGTCGAGTATCTaGAAACTTATAGTGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: RKLTLRSDCSRSVTHWLNPWSSI*KLIVPF Trigger: GAATGGCACTATAAGTTTTCAGATACTCGACCATGG...GTTTAGCCAGTGTGTGACAGACCTCGAACAATCTGATCTAAGGGTTAACTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | GAATCATCAGGATTTCACATAACCTACTTAAACACCTCTGACCGTTCCTTTTCAGACTCAATGGAACTCTaGATGTCTCCCAGGTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: ESSGFHITYLNTSDRSFSDSMEL*MSPRSI Trigger: GATAGACCTGGGAGACATTCAGAGTTCCATTGAGTC...TGAAAAGGAACGGTCAGAGGTGTTTAAGTAGGTTATGTGAAATCCTGATGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR GCA 90 bp | AGAAAGTTAACCCTTAGATCAGATTGTTCGAGGTCTGTCACACACTGGCTAAACTCTTGGTCCTTAAAGTaGTGTCTTTCGATCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RKLTLRSDCSRSVTHWLNSWSLK*CLSISL Trigger: CAGTGAGATCGAAAGACAGCACTTTAAGGACCAAGA...GTTTAGCCAGTGTGTGACAGACCTCGAACAATCTGATCTAAGGGTTAACTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR GCA 90 bp | GCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATGGATTCGCCCAAGGACATCTTTaGTATCACCAAGAAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ANLNNGPRSHLIFLVHGFAQGHL*YHQEAK Trigger: CTTCGCTTCTTGGTGATAGCAAAGATGTCCTTGGGC...GAATCCATGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTTAATAAAGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCAAGTTGTCGCCACTGTaGAGATTGTTAGCGCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CFNKEQANLNNGPRSHLIKLSPL*RLLARS Trigger: ACTGCGCGCTAACAATCTCCACAGTGGCGACAACTT...GATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCTTTATTAAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTTAATAAAGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCCTTCCAGAGGAATCCTaGATGTCAGGTTCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CFNKEQANLNNGPRSHLILPEES*MSGSGE Trigger: TTCCCCAGAACCTGACATCCAGGATTCCTCTGGAAG...GATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCTTTATTAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | CGGCATTACTGTTTACATATTCTTCAGCTAGATAAAAGGAAACACAGTGACCCACTGACTCATCTTTCCTaGGGTCAAATGCTGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RHYCLHILQLDKRKHSDPLTHLS*GQMLRF Trigger: GAACCTCAGCATTTGACCCCAGGAAAGATGAGTCAG...TGGGTCACTGTGTTTCCTTTTATCTAGCTGAAGAATATGTAAACAGTAATGCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | GGTCTTCTGAAGACAATAGTTGACCCTAGATGTATTTATAGGAGTGACGGCATCGAGACTCTTTCTTCGTaGGTTTACTTGAAGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLLKTIVDPRCIYRSDGIETLSS*VYLKLN Trigger: GTTCAACTTCAAGTAAACTCACGAAGAAAGAGTCTC...GATGCCGTCACTCCTATAAATACATCTAGGGTCAACTATTGTCTTCAGAAGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | CACAGGATGATGGGAGGAGATGACAAACTTCATAACTTGACATTCTCCAATGCTCATCTTTCCGGTTACTaGCATAAAAGGCAGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: HRMMGGDDKLHNLTFSNAHLSGY*HKRQIL Trigger: CAATATCTGCCTTTTATGTCAGTAACCGGAAAGATG...AGCATTGGAGAATGTCAAGTTATGAAGTTTGTCATCTCCTCCCATCATCCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | GCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATGGATTCAGTGCCATTCTCCAGTaGGTGGGTCAAGTTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: ANLNNGPRSHLIFLVHGFSAILQ*VGQVQI Trigger: TATTTGAACTTGACCCACTCACTGGAGAATGGCACT...GAATCCATGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | TGTATTTATAGGAGTGACGGCATCTTTGTTATGAACACTGGTATCAGAATACGTGACTCAATGGAACTCTaGATGTCTCCCAGGTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: CIYRSDGIFVMNTGIRIRDSMEL*MSPRSI Trigger: GATAGACCTGGGAGACATTCAGAGTTCCATTGAGTC...ACGTATTCTGATACCAGTGTTCATAACAAAGATGCCGTCACTCCTATAAATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATTTAGGACCCTTCACTaGCCAAATAGACTGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RASQFEQWSQITSNLSCSFRTLH*PNRLLQ Trigger: TTGGAGCAGTCTATTTGGGCAGTGAAGGGTCCTAAA...TGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATGCTTTTGTCACTCGTTaGCAGAGTTTCTCTGATTCG | + |
|
Preference number: 4 (lower is better) Translates to: EQANLNNGPRSHLIFLVHAFVTR*QSFSDS Trigger: CGAATCAGAGAAACTCTGGCAACGAGTGACAAAAGC...ATGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATACTTCACTATCCCAATaGCCTTCCAAAGTAGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQANLNNGPRSHLIFLVHTSLSQ*PSKVAR Trigger: CCTAGCTACTTTGGAAGGCCATTGGGATAGTGAAGT...ATGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTTCTGAAGACAATAGTTGACCCTAGATGTATTTATAGGAGTGACGGCATCTGGAACACTAACCATTaGAGTGCGATGTTTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLLKTIVDPRCIYRSDGIWNTNH*SAMFHF Trigger: AAAGTGAAACATCGCACTCCAATGGTTAGTGTTCCA...GATGCCGTCACTCCTATAAATACATCTAGGGTCAACTATTGTCTTCAGAAGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATCCATGGTCGAGTATCTaGAAACTTATAGTGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: EQANLNNGPRSHLIFLVHPWSSI*KLIVPF Trigger: GAATGGCACTATAAGTTTTCAGATACTCGACCATGG...ATGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR GCA 90 bp | ACTAACACCACACATGCCTGTTATTGTCTTGTCTTAGCCAGCAATATCTCACTAACCACTTTCTTCTGCTaGCTTGTTGGTTTATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TNTTHACYCLVLASNISLTTFFC*LVGLCF Trigger: GAAACATAAACCAACAAGGCAGCAGAAGAAAGTGGT...TAGTGAGATATTGCTGGCTAAGACAAGACAATAACAGGCATGTGTGGTGTTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | AAGTTAAATCGATTGCTGCAGCACACTAACACCACACATGCCTGTTATTGTCTTGACTGCTCCAAAGGATaGAAAAGCTTGAAACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLNRLLQHTNTTHACYCLDCSKG*KSLKQK Trigger: CTTTTGTTTCAAGCTTTTCCATCCTTTGGAGCAGTC...AAGACAATAACAGGCATGTGTGGTGTTAGTGTGCTGCAGCAATCGATTTAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | TATCTACCATTTTCCCACTGTAATTCCCTAATGAAAGTTATATGCCGGTCTTCTATAAAAGGCAGATATTaGTGGGTGATGGGACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: YLPFSHCNSLMKVICRSSIKGRY*WVMGHL Trigger: CAGGTGTCCCATCACCCACCAATATCTGCCTTTTAT...AGAAGACCGGCATATAACTTTCATTAGGGAATTACAGTGGGAAAATGGTAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | CGGCATTACTGTTTACATATTCTTCAGCTAGATAAAAGGAAACACAGTGACCCAGAGACTCTTTCTTCGTaGGTTTACTTGAAGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RHYCLHILQLDKRKHSDPETLSS*VYLKLN Trigger: GTTCAACTTCAAGTAAACTCACGAAGAAAGAGTCTC...TGGGTCACTGTGTTTCCTTTTATCTAGCTGAAGAATATGTAAACAGTAATGCCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | TGTATTTATAGGAGTGACGGCATCTTTGTTATGAACACTGGTATCAGAATACGTCATATGGCATTGTCATaGCGTAATCTTCACCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CIYRSDGIFVMNTGIRIRHMALS*RNLHLC Trigger: ACAGAGGTGAAGATTACGTCATGACAATGCCATATG...ACGTATTCTGATACCAGTGTTCATAACAAAGATGCCGTCACTCCTATAAATACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | GCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATGGATTCCTGTATCCAGTCTTCTaGCAGGTAATATTGACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ANLNNGPRSHLIFLVHGFLYPVF*QVILTV Trigger: AACTGTCAATATTACCTGTCAGAAGACTGGATACAG...GAATCCATGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | GAATCATCAGGATTTCACATAACCTACTTAAACACCTCTGACCGTTCCTTTTCACTGTATCCAGTCTTCTaGCAGGTAATATTGACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESSGFHITYLNTSDRSFSLYPVF*QVILTV Trigger: AACTGTCAATATTACCTGTCAGAAGACTGGATACAG...TGAAAAGGAACGGTCAGAGGTGTTTAAGTAGGTTATGTGAAATCCTGATGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATACCACTTTCTTCTGCTaGCTTGTTGGTTTATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EQANLNNGPRSHLIFLVHTTFFC*LVGLCF Trigger: GAAACATAAACCAACAAGGCAGCAGAAGAAAGTGGT...ATGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATGACTGCTCCAAAGGATaGAAAAGCTTGAAACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EQANLNNGPRSHLIFLVHDCSKG*KSLKQK Trigger: CTTTTGTTTCAAGCTTTTCCATCCTTTGGAGCAGTC...ATGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATATCATATCATTAAGTaGGTCCCATGGTCGAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: RASQFEQWSQITSNLSCSYHIIK*VPWSSI Trigger: GATACTCGACCATGGGACCCACTTAATGATATGATA...TGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | GCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATGGATTCTATCATATCATTAAGTaGGTCCCATGGTCGAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: ANLNNGPRSHLIFLVHGFYHIIK*VPWSSI Trigger: GATACTCGACCATGGGACCCACTTAATGATATGATA...GAATCCATGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR TCA 90 bp | TGTATTTATAGGAGTGACGGCATCTTTGTTATGAACACTGGTATCAGAATACGTTTGATGGACGTTCAATaGTCTCACAAGCATTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CIYRSDGIFVMNTGIRIRLMDVQ*SHKHSE Trigger: TTCTGAATGCTTGTGAGATCATTGAACGTCCATCAA...ACGTATTCTGATACCAGTGTTCATAACAAAGATGCCGTCACTCCTATAAATACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR TCA 90 bp | TGTATTTATAGGAGTGACGGCATCTTTGTTATGAACACTGGTATCAGAATACGTAGAATTCCTTTACAGTaGGCATATGGCATTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: CIYRSDGIFVMNTGIRIRRIPLQ*AYGIVM Trigger: CATGACAATGCCATATGCTCACTGTAAAGGAATTCT...ACGTATTCTGATACCAGTGTTCATAACAAAGATGCCGTCACTCCTATAAATACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTTAATAAAGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCCTTCCTTCGTGTACTTaGTTTTACAGATTGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CFNKEQANLNNGPRSHLILPSCT*FYRLSF Trigger: GAAGCTCAATCTGTAAAACCAAGTACACGAAGGAAG...GATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCTTTATTAAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR GCA 90 bp | TGCTTTAATAAAGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTACCACTTTCTTCTaGTGCCTTGTTGGTTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: CFNKEQANLNNGPRSHLIFTTFF*CLVGLC Trigger: ACATAAACCAACAAGGCAGCAGAAGAAAGTGGTAAA...GATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCTTTATTAAAGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS GCA 90 bp | TCCTTTAAGGGCTCCACAGGCTCAGGGTCGATGTACGAGTCGTCTTaGCTTTCGGACGTGTCTGTGTCGCTCTCCTCGCTCTTCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFKGSTGSGSMYESS*LSDVSVSLSSLFPS Trigger: GCTGGGGAAGAGCGAGGAGAGCGACACAGACACGTCCGAAAGGCAAGACGACTCGTACATCGACCCTGAGCCTGTGGAGCCCTTAAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CCA 90 bp | CCTCACCTGCCTCTCCCAGTTCTTCGTGGCTCTGCTCCATGTAGGTaGTCTCCTTTAAGGGCTCCACAGGCTCAGGGTCGATGTACGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PHLPLPVLRGSAPCR*SPLRAPQAQGRCTS Trigger: ACTCGTACATCGACCCTGAGCCTGTGGAGCCCTTAAAGGAGACCACCTACATGGAGCAGAGCCACGAAGAACTGGGAGAGGCAGGTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
||
| CDS GCA 90 bp | TCGCTCTCCTCGCTCTTCCCCAGCACCTCGTTGTCAGACTCATCGTaGTCCGGGTCGTTCTCCTTGTCAGATTTATCAGAGTACAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSSLFPSTSLSDSS*SGSFSLSDLSEYKS Trigger: AGATTTGTACTCTGATAAATCTGACAAGGAGAACGACCCGGAGCACGATGAGTCTGACAACGAGGTGCTGGGGAAGAGCGAGGAGAGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS-3UTR CAA 90 bp | ACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTCTACGATACTTTCCCCAGCACCTCGTaGTCAGACTCATCGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TGTAVREELFIHTWVYDTFPSTS*SDSSCS Trigger: GGAGCACGATGAGTCTGACAACGAGGTGCTGGGGAA...AGTATCGTAGACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CAA 90 bp | GGGTCTACGATACTCACGTGTAGGCACAGTCTCATACAAGTGTTCTGGCACTTAAGACACAGTTTCCGTTaGAGAGGCCTCACCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSTILTCRHSLIQVFWHLRHSFR*RGLTCL Trigger: GAGGCAGGTGAGGCCTCTCAAACGGAAACTGTGTCT...TAAGTGCCAGAACACTTGTATGAGACTGTGCCTACACGTGAGTATCGTAGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS CCA 90 bp | TGTCTTTCGATCTCACTGTCATTCAACTGGAAGTTGTCGCCACTGTaGAGATTGTTAGCGCGCAGTAAGCCATACAGCGTCACGTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CLSISLSFNWKLSPL*RLLARSKPYSVTCV Trigger: CACACACGTGACGCTGTATGGCTTACTGCGCGCTAACAATCTCCACAGTGGCGACAACTTCCAGTTGAATGACAGTGAGATCGAAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS-3UTR CAA 90 bp | GTATCTCACAAGGCCAACTTTTTAAGGGAATGCAGCTGTCAACTGAGCTGTGACGTTAGCGTCTCTGCCTaGGCGCTGACTCATCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSHKANFLRECSCQLSCDVSVSA*ALTHLS Trigger: GGAAAGATGAGTCAGCGCCAAGGCAGAGACGCTAAC...GTCACAGCTCAGTTGACAGCTGCATTCCCTTAAAAAGTTGGCCTTGTGAGATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| CDS GCA 90 bp | GTTCGTCACTGTTCGCTACAACAGTTGATGGCCCAAGGACATCTTTaGTATCACCAAGAAGCGAAGATCTGTCAGGTTCTCCGTCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VRHCSLQQLMAQGHL*YHQEAKICQVLRLL Trigger: TAGCAGACGGAGAACCTGACAGATCTTCGCTTCTTGGTGATAGCAAAGATGTCCTTGGGCCATCAACTGTTGTAGCGAACAGTGACGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | CAGAATACGTCACAGCACACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCATAAAAGGCAGATATaGGTGGGTGATGGGACACCT | + |
|
Preference number: 5 (lower is better) Translates to: QNTSQHTVEHRNCCQGRAHKRQI*VGDGTP Trigger: AGGTGTCCCATCACCCACCAATATCTGCCTTTTATG...AGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTGTGCTGTGACGTATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS CCA 90 bp | ACTCTGAATGTCTCCCAGGTCTATCCCCTTCTTCCTTCGTGTACTTaGTTTTACAGATTGAGCTTCACTTCCAGAGGAATCCTGGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: TLNVSQVYPLLPSCT*FYRLSFTSRGILDV Trigger: GACATCCAGGATTCCTCTGGAAGTGAAGCTCAATCTGTAAAACCAAGTACACGAAGGAAGAAGGGGATAGACCTGGGAGACATTCAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | AGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATTCCCCAGCACCTCGTaGTCAGACTCATCGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RASQFEQWSQITSNLSCSFPSTS*SDSSCS Trigger: GGAGCACGATGAGTCTGACAACGAGGTGCTGGGGAA...TGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | CACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTTGAGTAGCTTCCGTTaGGTCTTTGGCATTTATAGC | + |
|
Preference number: 5 (lower is better) Translates to: HCRTQELLSGKSSLYTRGLSSFR*VFGIYS Trigger: GCTATAAATGCCAAAGACCAAACGGAAGCTACTCAA...CCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | ACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTTCTGGCAGCTTGTCTTaGAGCTTCTTCCAGAACATA | + |
|
Preference number: 5 (lower is better) Translates to: TVEHRNCCQGRALYTHVGSGSLS*SFFQNI Trigger: TATGTTCTGGAAGAAGCTCAAAGACAAGCTGCCAGA...ACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | GGGTCTACGATACTCACGTGTAGGCACAGTCTCATACAAGTGTTCTGGCACTTAGTGCGATGTTTCACTTaGGTCTGGATAACTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GSTILTCRHSLIQVFWHLVRCFT*VWITPS Trigger: AGATGGAGTTATCCAGACCAAAGTGAAACATCGCAC...TAAGTGCCAGAACACTTGTATGAGACTGTGCCTACACGTGAGTATCGTAGACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | AGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATCGCCACTGTGGAGATaGTTAGCGCGCAGTAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RASQFEQWSQITSNLSCSSPLWR*LARSKP Trigger: TGGCTTACTGCGCGCTAACAATCTCCACAGTGGCGA...TGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | CACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGATCAGAGTACAAATCTaGGTCCTTAAAGTGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HCRTQELLSGKSSLYTRGIRVQI*VLKVLS Trigger: AGACAGCACTTTAAGGACCAAGATTTGTACTCTGAT...CCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | GCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATGGATTCAGACACAGTTTCCGTTaGAGAGGCCTCACCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ANLNNGPRSHLIFLVHGFRHSFR*RGLTCL Trigger: GAGGCAGGTGAGGCCTCTCAAACGGAAACTGTGTCT...GAATCCATGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | ACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTGCTTCCGTTTGGTCTTaGGCATTTATAGCTTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TVEHRNCCQGRALYTHVGASVWS*AFIAFV Trigger: GACAAAAGCTATAAATGCCAAAGACCAAACGGAAGC...ACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS CCA 90 bp | TGCTCCGGGTCGTTCTCCTTGTCAGATTTATCAGAGTACAAATCTTaGTCCTTAAAGTGCTGTCTTTCGATCTCACTGTCATTCAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSGSFSLSDLSEYKS*SLKCCLSISLSFNW Trigger: CCAGTTGAATGACAGTGAGATCGAAAGACAGCACTTTAAGGACCAAGATTTGTACTCTGATAAATCTGACAAGGAGAACGACCCGGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS-3UTR CAA 90 bp | CACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGACTTGCTCTTTGACATaGAAAGTGAAGAGTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: HCRTQELLSGKSSLYTRGTCSLT*KVKSHL Trigger: AAGATGACTCTTCACTTTCAATGTCAAAGAGCAAGT...CCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | CAGAATACGTCACAGCACACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTATTCAGACTTGCTCTTaGACATTGAAAGTGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QNTSQHTVEHRNCCQGRAIQTCS*TLKVKS Trigger: ACTCTTCACTTTCAATGTCAAAGAGCAAGTCTGAAT...AGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTGTGCTGTGACGTATTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | CACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGATTCAGACTTGCTCTTaGACATTGAAAGTGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HCRTQELLSGKSSLYTRGIQTCS*TLKVKS Trigger: ACTCTTCACTTTCAATGTCAAAGAGCAAGTCTGAAT...CCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | ACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTATCAGAGTACAAATCTaGGTCCTTAAAGTGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TVEHRNCCQGRALYTHVGIRVQI*VLKVLS Trigger: AGACAGCACTTTAAGGACCAAGATTTGTACTCTGAT...ACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | CAGAATACGTCACAGCACACTGTAGAACACAGGAACTGCTGTCAGGGAAGAGCTAGAAAGTTTTGCTGTTaGTTCTGGGATGAATCCATA | + |
|
Preference number: 5 (lower is better) Translates to: QNTSQHTVEHRNCCQGRARKFCC*FWDESI Trigger: TATGGATTCATCCCAGAACAAACAGCAAAACTTTCT...AGCTCTTCCCTGACAGCAGTTCCTGTGTTCTACAGTGTGCTGTGACGTATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | TTAACCCTTAGATCAGATTGTTCGAGGTCTGTCACACACTGGCTAAACTCAAGTCATAAAAGGCAGATATaGGTGGGTGATGGGACACCT | + |
|
Preference number: 5 (lower is better) Translates to: LTLRSDCSRSVTHWLNSSHKRQI*VGDGTP Trigger: AGGTGTCCCATCACCCACCAATATCTGCCTTTTATG...ACTTGAGTTTAGCCAGTGTGTGACAGACCTCGAACAATCTGATCTAAGGGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| CDS TCA 90 bp | CTTTTAATCTCTTCCTGTGTCTGCTTTATAGACTCAATGGAACTCTaGATGTCTCCCAGGTCTATCCCCTTCTTCCTTCGTGTACTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLISSCVCFIDSMEL*MSPRSIPFFLRVLG Trigger: ACCAAGTACACGAAGGAAGAAGGGGATAGACCTGGGAGACATTCAGAGTTCCATTGAGTCTATAAAGCAGACACAGGAAGAGATTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CAA 90 bp | ACACAGGAACTGCTGTCAGGGAAGAGCTCTTTATACACACGTGGGTCTACGATAGTTTCTTTAGTCCCTTaGGCTTCTTATAAAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TQELLSGKSSLYTRGSTIVSLVP*ASYKIL Trigger: CAGGATTTTATAAGAAGCCAAAGGGACTAAAGAAAC...TATCGTAGACCCACGTGTGTATAAAGAGCTCTTCCCTGACAGCAGTTCCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS TCA 90 bp | GGTCCCATGGTCGAGTATCTGAAAACTTATAGTGCCATTCTCCAGTaGGTGGGTCAAGTTCAAATAACTTACAAACCCACTCTTGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GPMVEYLKTYSAILQ*VGQVQITYKPTLEF Trigger: AAACTCAAGAGTGGGTTTGTAAGTTATTTGAACTTGACCCACTCACTGGAGAATGGCACTATAAGTTTTCAGATACTCGACCATGGGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CAA 90 bp | AGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATCATTCAACTGGAAGTaGTCGCCACTGTGGAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: RASQFEQWSQITSNLSCSSFNWK*SPLWRL Trigger: CAATCTCCACAGTGGCGACAACTTCCAGTTGAATGA...TGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS TCA 90 bp | TTGTGCCATAAAGAATTCCTTTACAGTGAGCATATGGCATTGTCATaGCGTAATCTTCACCTCTGTTCAAGAAAGTTAACCGGGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LCHKEFLYSEHMALS*RNLHLCSRKLTGLL Trigger: GAGAAGCCCGGTTAACTTTCTTGAACAGAGGTGAAGATTACGTCATGACAATGCCATATGCTCACTGTAAAGGAATTCTTTATGGCACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
||
| CDS GCA 90 bp | TTCTCCTTGTCAGATTTATCAGAGTACAAATCTTGGTCCTTAAAGTaGTGTCTTTCGATCTCACTGTCATTCAACTGGAAGTTGTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FSLSDLSEYKSWSLK*CLSISLSFNWKLSP Trigger: TGGCGACAACTTCCAGTTGAATGACAGTGAGATCGAAAGACAGCACTTTAAGGACCAAGATTTGTACTCTGATAAATCTGACAAGGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
||
| CDS-3UTR CAA 90 bp | TGTATTTATAGGAGTGACGGCATCTTTGTTATGAACACTGGTATCAGAATACGTTCATTCAACTGGAAGTaGTCGCCACTGTGGAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: CIYRSDGIFVMNTGIRIRSFNWK*SPLWRL Trigger: CAATCTCCACAGTGGCGACAACTTCCAGTTGAATGA...ACGTATTCTGATACCAGTGTTCATAACAAAGATGCCGTCACTCCTATAAATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CAA 90 bp | GAATCATCAGGATTTCACATAACCTACTTAAACACCTCTGACCGTTCCTTTTCATCTGGCAGCTTGTCTTaGAGCTTCTTCCAGAACATA | + |
|
Preference number: 5 (lower is better) Translates to: ESSGFHITYLNTSDRSFSSGSLS*SFFQNI Trigger: TATGTTCTGGAAGAAGCTCAAAGACAAGCTGCCAGA...TGAAAAGGAACGGTCAGAGGTGTTTAAGTAGGTTATGTGAAATCCTGATGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
||
| CDS-3UTR CAA 90 bp | AGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCAGTGCGATGTTTCACTTaGGTCTGGATAACTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RASQFEQWSQITSNLSCSVRCFT*VWITPS Trigger: AGATGGAGTTATCCAGACCAAAGTGAAACATCGCAC...TGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
||
| CDS-3UTR CAA 90 bp | TGCTTTAATAAAGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTGTTCGCTACAACAGTaGATGGCCCAAGGACATCTT | + |
|
Preference number: 5 (lower is better) Translates to: CFNKEQANLNNGPRSHLICSLQQ*MAQGHL Trigger: AAGATGTCCTTGGGCCATCAACTGTTGTAGCGAACA...GATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCTTTATTAAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | AGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCAGCTTCCGTTTGGTCTTaGGCATTTATAGCTTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RASQFEQWSQITSNLSCSASVWS*AFIAFV Trigger: GACAAAAGCTATAAATGCCAAAGACCAAACGGAAGC...TGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | TATCTACCATTTTCCCACTGTAATTCCCTAATGAAAGTTATATGCCGGTCTTCTTTGAGTAGCTTCCGTTaGGTCTTTGGCATTTATAGC | + |
|
Preference number: 5 (lower is better) Translates to: YLPFSHCNSLMKVICRSSLSSFR*VFGIYS Trigger: GCTATAAATGCCAAAGACCAAACGGAAGCTACTCAA...AGAAGACCGGCATATAACTTTCATTAGGGAATTACAGTGGGAAAATGGTAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS GCA 90 bp | AGTTTCTCTGATTCGAAATCATCCTGTTCTTCAAACTTTACAGTGTaGCTTATTAATCTCCACTGTTTAATGTCAGGAGTTGGATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SFSDSKSSCSSNFTV*LINLHCLMSGVGFQ Trigger: CTGGAATCCAACTCCTGACATTAAACAGTGGAGATTAATAAGGCACACTGTAAAGTTTGAAGAACAGGATGATTTCGAATCAGAGAAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS-3UTR CAA 90 bp | GAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATACTTGCTCTTTGACATaGAAAGTGAAGAGTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: EQANLNNGPRSHLIFLVHTCSLT*KVKSHL Trigger: AAGATGACTCTTCACTTTCAATGTCAAAGAGCAAGT...ATGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | GAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATGTTTCTTTAGTCCCTTaGGCTTCTTATAAAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EQANLNNGPRSHLIFLVHVSLVP*ASYKIL Trigger: CAGGATTTTATAAGAAGCCAAAGGGACTAAAGAAAC...ATGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | AGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCTTTCTTGTTCATCTTCTGCTGCCTTGTaGGTTTATGTTTCATTTTTG | + |
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Preference number: 5 (lower is better) Translates to: RASQFEQWSQITSNLSCSSSAAL*VYVSFL Trigger: CAAAAATGAAACATAAACCAACAAGGCAGCAGAAGA...TGAACAAGAAAGATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | TATCTACCATTTTCCCACTGTAATTCCCTAATGAAAGTTATATGCCGGTCTTCTCTTACAAACCCACTCTaGAGTTTTTGTTTTTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: YLPFSHCNSLMKVICRSSLTNPL*SFCFSI Trigger: GATCGAAAAACAAAAACTCAAGAGTGGGTTTGTAAG...AGAAGACCGGCATATAACTTTCATTAGGGAATTACAGTGGGAAAATGGTAGATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | TGCTTTAATAAAGAGCAAGCCAATTTGAACAATGGTCCCAGATCACATCTAATCCTTACAAACCCACTCTaGAGTTTTTGTTTTTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: CFNKEQANLNNGPRSHLILTNPL*SFCFSI Trigger: GATCGAAAAACAAAAACTCAAGAGTGGGTTTGTAAG...GATTAGATGTGATCTGGGACCATTGTTCAAATTGGCTTGCTCTTTATTAAAGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS-3UTR CAA 90 bp | TATCTACCATTTTCCCACTGTAATTCCCTAATGAAAGTTATATGCCGGTCTTCTTCTTCTGCTGCCTTGTaGGTTTATGTTTCATTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: YLPFSHCNSLMKVICRSSSSAAL*VYVSFL Trigger: CAAAAATGAAACATAAACCAACAAGGCAGCAGAAGA...AGAAGACCGGCATATAACTTTCATTAGGGAATTACAGTGGGAAAATGGTAGATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS GCA 72 bp | GGCTCCACAGGCTCAGGGTCGATGTACGAGTCGTCTTaGCTTTCGGACGTGTCTGTGTCGCTCTCCTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GSTGSGSMYESS*LSDVSVSLSSL Trigger: GAGCGAGGAGAGCGACACAGACACGTCCGAAAGGCAAGACGACTCGTACATCGACCCTGAGCCTGTGGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CAA 72 bp | GGGCTCCACAGGCTCAGGGTCGATGTACGAGTCGTCTaGCCTTTCGGACGTGTCTGTGTCGCTCTCCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLHRLRVDVRVV*PFGRVCVALLA Trigger: AGCGAGGAGAGCGACACAGACACGTCCGAAAGGCAAGACGACTCGTACATCGACCCTGAGCCTGTGGAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS GCA 72 bp | GTCACGTGTGTGCTGTCTGAGGAGATGCTCAGGTCGTaGTCCTTCCCCTCCCTCACCATGGTCCGCTTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: VTCVLSEEMLRS*SFPSLTMVRLR Trigger: CCTTAAGCGGACCATGGTGAGGGAGGGGAAGGAGCACGACCTGAGCATCTCCTCAGACAGCACACACGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS GCA 72 bp | AGCCATACAGCGTCACGTGTGTGCTGTCTGAGGAGATaGTCAGGTCGTGCTCCTTCCCCTCCCTCACCATGG | + |
|
Preference number: 6 (lower is better) Translates to: SHTASRVCCLRR*SGRAPSPPSPW Trigger: CCATGGTGAGGGAGGGGAAGGAGCACGACCTGAGCATCTCCTCAGACAGCACACACGTGACGCTGTATGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CAA 72 bp | TCTGTGTCGCTCTCCTCGCTCTTCCCCAGCACCTCGTaGTCAGACTCATCGTGCTCCGGGTCGTTCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SVSLSSLFPSTS*SDSSCSGSFSL Trigger: CAAGGAGAACGACCCGGAGCACGATGAGTCTGACAACGAGGTGCTGGGGAAGAGCGAGGAGAGCGACACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CCA 72 bp | CCTCTCCCAGTTCTTCGTGGCTCTGCTCCATGTAGGTaGTCTCCTTTAAGGGCTCCACAGGCTCAGGGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: PLPVLRGSAPCR*SPLRAPQAQGR Trigger: TCGACCCTGAGCCTGTGGAGCCCTTAAAGGAGACCACCTACATGGAGCAGAGCCACGAAGAACTGGGAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CAA 90 bp | TCGGACGTGTCTGTGTCGCTCTCCTCGCTCTTCCCCAGCACCTCGTaGTCAGACTCATCGTGCTCCGGGTCGTTCTCCTTGTCAGATTTA | + |
|
Preference number: 6 (lower is better) Translates to: SDVSVSLSSLFPSTS*SDSSCSGSFSLSDL Trigger: TAAATCTGACAAGGAGAACGACCCGGAGCACGATGAGTCTGACAACGAGGTGCTGGGGAAGAGCGAGGAGAGCGACACAGACACGTCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CAA 90 bp | AGGCTGAGGCAGATCTCTAGTTGGGGTTGGGTTAGCGTCTCTGCCTaGGCGCTGACTCATCTTTCCTGGGGTCAAATGCTGAGGTTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: RLRQISSWGWVSVSA*ALTHLSWGQMLRFV Trigger: GACGAACCTCAGCATTTGACCCCAGGAAAGATGAGTCAGCGCCAAGGCAGAGACGCTAACCCAACCCCAACTAGAGATCTGCCTCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| CDS GCA 72 bp | TCGCTCTTCCCCAGCACCTCGTTGTCAGACTCATCGTaGTCCGGGTCGTTCTCCTTGTCAGATTTATCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLFPSTSLSDSS*SGSFSLSDLSE Trigger: CTCTGATAAATCTGACAAGGAGAACGACCCGGAGCACGATGAGTCTGACAACGAGGTGCTGGGGAAGAGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CCA 72 bp | GTTAGCGTCTCTGCCTTGGCGCTGACTCATCTTTCCTaGGGTCAAATGCTGAGGTTCGTCACTGTTCGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: VSVSALALTHLS*GQMLRFVTVRY Trigger: GTAGCGAACAGTGACGAACCTCAGCATTTGACCCCAGGAAAGATGAGTCAGCGCCAAGGCAGAGACGCTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| CDS CAA 72 bp | CAGATCTCTAGTTGGGGTTGGGTTAGCGTCTCTGCCTaGGCGCTGACTCATCTTTCCTGGGGTCAAATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QISSWGWVSVSA*ALTHLSWGQML Trigger: CAGCATTTGACCCCAGGAAAGATGAGTCAGCGCCAAGGCAGAGACGCTAACCCAACCCCAACTAGAGATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105275.9 |
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| CDS CAA 90 bp | TCGATCTCACTGTCATTCAACTGGAAGTTGTCGCCACTGTGGAGATaGTTAGCGCGCAGTAAGCCATACAGCGTCACGTGTGTGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SISLSFNWKLSPLWR*LARSKPYSVTCVLS Trigger: AGACAGCACACACGTGACGCTGTATGGCTTACTGCGCGCTAACAATCTCCACAGTGGCGACAACTTCCAGTTGAATGACAGTGAGATCGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CAA 72 bp | CTGTCATTCAACTGGAAGTTGTCGCCACTGTGGAGATaGTTAGCGCGCAGTAAGCCATACAGCGTCACGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSFNWKLSPLWR*LARSKPYSVTC Trigger: ACACGTGACGCTGTATGGCTTACTGCGCGCTAACAATCTCCACAGTGGCGACAACTTCCAGTTGAATGACAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CCA 72 bp | ATCTCACTGTCATTCAACTGGAAGTTGTCGCCACTGTaGAGATTGTTAGCGCGCAGTAAGCCATACAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: ISLSFNWKLSPL*RLLARSKPYSV Trigger: GACGCTGTATGGCTTACTGCGCGCTAACAATCTCCACAGTGGCGACAACTTCCAGTTGAATGACAGTGAGAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CAA 90 bp | CCCAGCACCTCGTTGTCAGACTCATCGTGCTCCGGGTCGTTCTCCTaGTCAGATTTATCAGAGTACAAATCTTGGTCCTTAAAGTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PSTSLSDSSCSGSFS*SDLSEYKSWSLKCC Trigger: ACAGCACTTTAAGGACCAAGATTTGTACTCTGATAAATCTGACAAGGAGAACGACCCGGAGCACGATGAGTCTGACAACGAGGTGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CAA 90 bp | TCCTTAAAGTGCTGTCTTTCGATCTCACTGTCATTCAACTGGAAGTaGTCGCCACTGTGGAGATTGTTAGCGCGCAGTAAGCCATACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLKCCLSISLSFNWK*SPLWRLLARSKPYS Trigger: GCTGTATGGCTTACTGCGCGCTAACAATCTCCACAGTGGCGACAACTTCCAGTTGAATGACAGTGAGATCGAAAGACAGCACTTTAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CCA 72 bp | GTCTCCCAGGTCTATCCCCTTCTTCCTTCGTGTACTTaGTTTTACAGATTGAGCTTCACTTCCAGAGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: VSQVYPLLPSCT*FYRLSFTSRGI Trigger: GATTCCTCTGGAAGTGAAGCTCAATCTGTAAAACCAAGTACACGAAGGAAGAAGGGGATAGACCTGGGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS CAA 90 bp | AACTCTGAATGTCTCCCAGGTCTATCCCCTTCTTCCTTCGTGTACTaGGTTTTACAGATTGAGCTTCACTTCCAGAGGAATCCTGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: NSECLPGLSPSSFVY*VLQIELHFQRNPGC Trigger: ACATCCAGGATTCCTCTGGAAGTGAAGCTCAATCTGTAAAACCAAGTACACGAAGGAAGAAGGGGATAGACCTGGGAGACATTCAGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS TCA 72 bp | TCTTCCTGTGTCTGCTTTATAGACTCAATGGAACTCTaGATGTCTCCCAGGTCTATCCCCTTCTTCCTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: SSCVCFIDSMEL*MSPRSIPFFLR Trigger: ACGAAGGAAGAAGGGGATAGACCTGGGAGACATTCAGAGTTCCATTGAGTCTATAAAGCAGACACAGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS CAA 72 bp | TCGTTGTCAGACTCATCGTGCTCCGGGTCGTTCTCCTaGTCAGATTTATCAGAGTACAAATCTTGGTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SLSDSSCSGSFS*SDLSEYKSWSL Trigger: TAAGGACCAAGATTTGTACTCTGATAAATCTGACAAGGAGAACGACCCGGAGCACGATGAGTCTGACAACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CAA 72 bp | TGTCTCCCAGGTCTATCCCCTTCTTCCTTCGTGTACTaGGTTTTACAGATTGAGCTTCACTTCCAGAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: CLPGLSPSSFVY*VLQIELHFQRN Trigger: ATTCCTCTGGAAGTGAAGCTCAATCTGTAAAACCAAGTACACGAAGGAAGAAGGGGATAGACCTGGGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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| CDS CAA 90 bp | GTGCTCCGGGTCGTTCTCCTTGTCAGATTTATCAGAGTACAAATCTaGGTCCTTAAAGTGCTGTCTTTCGATCTCACTGTCATTCAACTG | + |
|
Preference number: 6 (lower is better) Translates to: VLRVVLLVRFIRVQI*VLKVLSFDLTVIQL Trigger: CAGTTGAATGACAGTGAGATCGAAAGACAGCACTTTAAGGACCAAGATTTGTACTCTGATAAATCTGACAAGGAGAACGACCCGGAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CAA 72 bp | GTCGTTCTCCTTGTCAGATTTATCAGAGTACAAATCTaGGTCCTTAAAGTGCTGTCTTTCGATCTCACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VVLLVRFIRVQI*VLKVLSFDLTV Trigger: GACAGTGAGATCGAAAGACAGCACTTTAAGGACCAAGATTTGTACTCTGATAAATCTGACAAGGAGAACGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CAA 90 bp | ATCTCTGGCAGCTTGTCTTTGAGCTTCTTCCAGAACATACTTTTCTaGAGTAGCTTCCGTTTGGTCTTTGGCATTTATAGCTTTTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: ISGSLSLSFFQNILF*SSFRLVFGIYSFCH Trigger: GTGACAAAAGCTATAAATGCCAAAGACCAAACGGAAGCTACTCAAGAAAAGTATGTTCTGGAAGAAGCTCAAAGACAAGCTGCCAGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS GCA 72 bp | GTTTGGTCTTTGGCATTTATAGCTTTTGTCACTCGTTaGCAGAGTTTCTCTGATTCGAAATCATCCTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VWSLAFIAFVTR*QSFSDSKSSCS Trigger: AGAACAGGATGATTTCGAATCAGAGAAACTCTGGCAACGAGTGACAAAAGCTATAAATGCCAAAGACCAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CCA 72 bp | TCGTTCTCCTTGTCAGATTTATCAGAGTACAAATCTTaGTCCTTAAAGTGCTGTCTTTCGATCTCACTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SFSLSDLSEYKS*SLKCCLSISLS Trigger: TGACAGTGAGATCGAAAGACAGCACTTTAAGGACCAAGATTTGTACTCTGATAAATCTGACAAGGAGAACGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CAA 72 bp | AGCTTGTCTTTGAGCTTCTTCCAGAACATACTTTTCTaGAGTAGCTTCCGTTTGGTCTTTGGCATTTATAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLSLSFFQNILF*SSFRLVFGIYS Trigger: GCTATAAATGCCAAAGACCAAACGGAAGCTACTCAAGAAAAGTATGTTCTGGAAGAAGCTCAAAGACAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS GCA 72 bp | TCAGATTTATCAGAGTACAAATCTTGGTCCTTAAAGTaGTGTCTTTCGATCTCACTGTCATTCAACTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SDLSEYKSWSLK*CLSISLSFNWK Trigger: CTTCCAGTTGAATGACAGTGAGATCGAAAGACAGCACTTTAAGGACCAAGATTTGTACTCTGATAAATCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CCA 72 bp | CATTGTGCCATAAAGAATTCCTTTACAGTGAGCATATaGCATTGTCATGACGTAATCTTCACCTCTGTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: HCAIKNSFTVSI*HCHDVIFTSVQ Trigger: TTGAACAGAGGTGAAGATTACGTCATGACAATGCCATATGCTCACTGTAAAGGAATTCTTTATGGCACAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS TCA 72 bp | AAAGAATTCCTTTACAGTGAGCATATGGCATTGTCATaGCGTAATCTTCACCTCTGTTCAAGAAAGTTAACC | + |
|
Preference number: 6 (lower is better) Translates to: KEFLYSEHMALS*RNLHLCSRKLT Trigger: GGTTAACTTTCTTGAACAGAGGTGAAGATTACGTCATGACAATGCCATATGCTCACTGTAAAGGAATTCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS TCA 72 bp | ATTTATAGCTTTTGTCACTCGTTGCCAGAGTTTCTCTaGTTCGAAATCATCCTGTTCTTCAAACTTTACAGT | + |
|
Preference number: 6 (lower is better) Translates to: IYSFCHSLPEFL*FEIILFFKLYS Trigger: ACTGTAAAGTTTGAAGAACAGGATGATTTCGAATCAGAGAAACTCTGGCAACGAGTGACAAAAGCTATAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 ENSMUST00000238838.2 |
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| CDS CCA 72 bp | ACACTAACCATTGGAGTGCGATGTTTCACTTTGGTCTaGATAACTCCATCTTTTTCAAATTGTATCATATCA | + |
|
Preference number: 6 (lower is better) Translates to: TLTIGVRCFTLV*ITPSFSNCIIS Trigger: TGATATGATACAATTTGAAAAAGATGGAGTTATCCAGACCAAAGTGAAACATCGCACTCCAATGGTTAGTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095310.3 ENSMUST00000105275.9 |
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