Pregenerated sensors for OSBPL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029822Ensembl transcript IDs: ENSMUST00000071728.11, ENSMUST00000090019.10, ENSMUST00000114466.8, ENSMUST00000114468.9, ENSMUST00000136926.3, ENSMUST00000146341.4, ENSMUST00000203907.3
Found 382 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATAAGGCAGATGGTCAAACTGGCTATACAAGGTCAAAAGGGCGGTaGTCGGTAAGAGGTAGAGAGTACCAAAGCCGTGTGGAGGAACAA | + |
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Preference number: 1 (lower is better) Translates to: YKADGQTGYTRSKGR*SVRGREYQSRVEEQ Trigger: TTGTTCCTCCACACGGCTTTGGTACTCTCTACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATAGCCAGTTTGACCATCTGCCTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR CCA 90 bp | CTGCAGGAAGAAGCTGCACTGAGGCTTTTATTACGACAGGGCCTGTaGAGGGAACTACACTACTCCTTTGCCACACTGAAGATACTCATT | + |
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Preference number: 1 (lower is better) Translates to: LQEEAALRLLLRQGL*RELHYSFATLKILI Trigger: AATGAGTATCTTCAGTGTGGCAAAGGAGTAGTGTAGTTCCCTCCACAGGCCCTGTCGTAATAAAAGCCTCAGTGCAGCTTCTTCCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR GCA 90 bp | TTCCGAAAGCCCTTCATCCAGACACGGGCAGTGACTTACAGAGCTTaGACATGGTTCTGGAACATATTTTTGTTCATGCTTCTCCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: FRKPFIQTRAVTYRA*TWFWNIFLFMLLPD Trigger: ATCAGGGAGAAGCATGAACAAAAATATGTTCCAGAACCATGTGCAAGCTCTGTAAGTCACTGCCCGTGTCTGGATGAAGGGCTTTCGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR GCA 90 bp | GCTTTTATTACGACAGGGCCTGTGGAGGGAACTACACTACTCCTTTaGCACACTGAAGATACTCATTCCTTAACGATACCTTGCAGATCG | + |
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Preference number: 1 (lower is better) Translates to: AFITTGPVEGTTLLL*HTEDTHSLTIPCRS Trigger: CGATCTGCAAGGTATCGTTAAGGAATGAGTATCTTCAGTGTGGCAAAGGAGTAGTGTAGTTCCCTCCACAGGCCCTGTCGTAATAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR TCA 90 bp | CACTCCACTTGTGAAAACTTCAGCAGTGCAGTTGGTTATCTGGTGTaGCACAGGTCAACTCTGGGAGTTGGCTCTTTCCTTCTATCTTTT | + |
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Preference number: 1 (lower is better) Translates to: HSTCENFSSAVGYLV*HRSTLGVGSFLLSF Trigger: AAAAGATAGAAGGAAAGAGCCAACTCCCAGAGTTGACCTGTGTCACACCAGATAACCAACTGCACTGCTGAAGTTTTCACAAGTGGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR CCA 90 bp | GCGAAAAGATATCCCAGCTACCAATTAACCCTGGGTAGCTATGCATaGGTGAGTATCCCTGGGTGTTATTATTTCTTAACGCATCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: AKRYPSYQLTLGSYA*VSIPGCYYFLTHLG Trigger: TCCCAGATGCGTTAAGAAATAATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCTGGGATATCTTTTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR CCA 90 bp | TTCAACACTCCACTTGTGAAAACTTCAGCAGTGCAGTTGGTTATCTaGTGTGACACAGGTCAACTCTGGGAGTTGGCTCTTTCCTTCTAT | + |
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Preference number: 1 (lower is better) Translates to: FNTPLVKTSAVQLVI*CDTGQLWELALSFY Trigger: ATAGAAGGAAAGAGCCAACTCCCAGAGTTGACCTGTGTCACACCAGATAACCAACTGCACTGCTGAAGTTTTCACAAGTGGAGTGTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR CCA 90 bp | AAGCCCTTCATCCAGACACGGGCAGTGACTTACAGAGCTTGCACATaGTTCTGGAACATATTTTTGTTCATGCTTCTCCCTGATCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: KPFIQTRAVTYRACT*FWNIFLFMLLPDPN Trigger: ATTTGGATCAGGGAGAAGCATGAACAAAAATATGTTCCAGAACCATGTGCAAGCTCTGTAAGTCACTGCCCGTGTCTGGATGAAGGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR TCA 90 bp | ATGAAAACATTCTTGGTACTTCAGCACCGGCAGAATTGTTCTGTATaGGCAATCGAAGAGCTGTCTGAGGCGAAAAGATATCCCAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: MKTFLVLQHRQNCSV*AIEELSEAKRYPSY Trigger: GTAGCTGGGATATCTTTTCGCCTCAGACAGCTCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTACCAAGAATGTTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR GCA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATaGTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGAAG | + |
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Preference number: 1 (lower is better) Translates to: FSAYNATLSTSDHSR*YLLNIQTAVRCFRK Trigger: CTTCCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| 3UTR CCA 90 bp | TTCATCCAGACACGGGCAGTGACTTACAGAGCTTGCACATGGTTCTaGAACATATTTTTGTTCATGCTTCTCCCTGATCCAAATAAGATG | + |
|
Preference number: 1 (lower is better) Translates to: FIQTRAVTYRACTWF*NIFLFMLLPDPNKM Trigger: CATCTTATTTGGATCAGGGAGAAGCATGAACAAAAATATGTTCCAGAACCATGTGCAAGCTCTGTAAGTCACTGCCCGTGTCTGGATGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR GCA 90 bp | TATTTAAAGCCACCAGTGACTTCGCTGAAGTTTAGAAGGTCACACTaGCGTGGGCTGTTACTGTTTATACTAAATGAGAGACATTTCATC | + |
|
Preference number: 1 (lower is better) Translates to: YLKPPVTSLKFRRSH*RGLLLFILNERHFI Trigger: GATGAAATGTCTCTCATTTAGTATAAACAGTAACAGCCCACGGCAGTGTGACCTTCTAAACTTCAGCGAAGTCACTGGTGGCTTTAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR TCA 90 bp | AAGGCAACAGAAGTAAAGGGAGGGAAGTTTGCACTTCTGGTTGCTTaGTGCCCACCTTATATAAAGAATATGCATCTCACTAACTTTATA | + |
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Preference number: 1 (lower is better) Translates to: KATEVKGGKFALLVA*CPPYIKNMHLTNFI Trigger: TATAAAGTTAGTGAGATGCATATTCTTTATATAAGGTGGGCATCAAGCAACCAGAAGTGCAAACTTCCCTCCCTTTACTTCTGTTGCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR CAA 90 bp | GCAGTGCAGTTGGTTATCTGGTGTGACACAGGTCAACTCTGGGAGTaGGCTCTTTCCTTCTATCTTTTAGATAGGTCCTGGAGACTGGAC | + |
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Preference number: 2 (lower is better) Translates to: AVQLVIWCDTGQLWE*ALSFYLLDRSWRLD Trigger: GTCCAGTCTCCAGGACCTATCTAAAAGATAGAAGGAAAGAGCCAACTCCCAGAGTTGACCTGTGTCACACCAGATAACCAACTGCACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR-3UTR GCA 90 bp | GTGCACAGTAGGCCTACATTAAGAAGCAAAGTAGCCCTCACCTCTATTTTTGGCGCCGCACCACCCAGCTaGTTAGAAATGGAAATGAGA | + |
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Preference number: 2 (lower is better) Translates to: VHSRPTLRSKVALTSIFGAAPPS*LEMEMR Trigger: TCTCATTTCCATTTCTAAGCAGCTGGGTGGTGCGGC...GCCAAAAATAGAGGTGAGGGCTACTTTGCTTCTTAATGTAGGCCTACTGTGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGCTGCTTAGAAATGGAAATGAGATTCATGCTGCGTTCATCTTGGTGTCTCTTTTAGATAGGTCCTaGAGACTGGACCCAGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: TQLLRNGNEIHAAFILVSLLDRS*RLDPVP Trigger: TGGCACTGGGTCCAGTCTCCAGGACCTATCTAAAAG...AGACACCAAGATGAACGCAGCATGAATCTCATTTCCATTTCTAAGCAGCTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGGACGACATAGAAGAACAGCAATGTTTGTCTATAAGGCAGATGGTCAAACTTGCAAGCCAGGGGTaGAGCAGGAAGCTGAAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: QEDDIEEQQCLSIRQMVKLASQG*SRKLKV Trigger: TACTTTCAGCTTCCTGCTCCACCCCTGGCTTGCAAG...TTTGACCATCTGCCTTATAGACAAACATTGCTGTTCTTCTATGTCGTCCTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR CAA 90 bp | CGGGCAGTGACTTACAGAGCTTGCACATGGTTCTGGAACATATTTTaGTTCATGCTTCTCCCTGATCCAAATAAGATGACTACAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RAVTYRACTWFWNIF*FMLLPDPNKMTTEE Trigger: CTCCTCTGTAGTCATCTTATTTGGATCAGGGAGAAGCATGAACAAAAATATGTTCCAGAACCATGTGCAAGCTCTGTAAGTCACTGCCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR-3UTR CCA 90 bp | TATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTAGAGAGTACCAAAGCCGTATGGGTGAGTATCCCTaGGTGTTATTATTTCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: YTRSKGRCSVRGREYQSRMGEYP*VLLFLN Trigger: GTTAAGAAATAATAACACCCAGGGATACTCACCCAT...ACGGCTTTGGTACTCTCTACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR CAA 90 bp | CCCTTGCAGCTTTCTCAAGAGGACGACATAGAAGAACAGCAATGTTaGTCTATAAGGCAGATGGTCAAACTGGCTATACAAGGTCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: PLQLSQEDDIEEQQC*SIRQMVKLAIQGQK Trigger: CTTTTGACCTTGTATAGCCAGTTTGACCATCTGCCTTATAGACAAACATTGCTGTTCTTCTATGTCGTCCTCTTGAGAAAGCTGCAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR-3UTR CCA 90 bp | GTGCACAGTAGGCCTACATTAAGAAGCAAAGTAGCCCTCACCTCTATTTTTGGCATGGGTGAGTATCCCTaGGTGTTATTATTTCTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: VHSRPTLRSKVALTSIFGMGEYP*VLLFLN Trigger: GTTAAGAAATAATAACACCCAGGGATACTCACCCAT...GCCAAAAATAGAGGTGAGGGCTACTTTGCTTCTTAATGTAGGCCTACTGTGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGAGGACGACATAGAAGAACAGCAATGTTTGTCTATAAGGCAGATGGTCAAACAGAATTGTTCTGTATaGGCAATCGAAGAGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: QEDDIEEQQCLSIRQMVKQNCSV*AIEELS Trigger: AGACAGCTCTTCGATTGCTCATACAGAACAATTCTG...TTTGACCATCTGCCTTATAGACAAACATTGCTGTTCTTCTATGTCGTCCTCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCAATGTTTGTCTATAAGGCAGATGGTCAAACTGGCTATACAAGGTCAAAAGGTTTGCACTTCTGGTTaGTTGATGCCCACCTTATAT | + |
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Preference number: 2 (lower is better) Translates to: QQCLSIRQMVKLAIQGQKVCTSG*LMPTLY Trigger: ATATAAGGTGGGCATCAAGCAACCAGAAGTGCAAAC...CTTTTGACCTTGTATAGCCAGTTTGACCATCTGCCTTATAGACAAACATTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR CAA 90 bp | CAGAGTATTACAAATAAGAAGAGAGTCAAGGAAAGAGGTAAACCCTaGCAGCTTTCTCAAGAGGACGACATAGAAGAACAGCAATGTTTG | + |
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Preference number: 2 (lower is better) Translates to: QSITNKKRVKERGKP*QLSQEDDIEEQQCL Trigger: CAAACATTGCTGTTCTTCTATGTCGTCCTCTTGAGAAAGCTGCAAGGGTTTACCTCTTTCCTTGACTCTCTTCTTATTTGTAATACTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR-3UTR TCA 90 bp | GAAGTTTGCACTTCTGGTTGCTTGATGCCCACCTTATATAAAGAATATGCATCTCCAGGAAAATGCAAATaGAAACATTCTTGGTACTTC | + |
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Preference number: 2 (lower is better) Translates to: EVCTSGCLMPTLYKEYASPGKCK*KHSWYF Trigger: GAAGTACCAAGAATGTTTTCATTTGCATTTTCCTGG...AGATGCATATTCTTTATATAAGGTGGGCATCAAGCAACCAGAAGTGCAAACTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR GCA 72 bp | GCTGAAATCCCACGTGTCCTCTCGGGTTTGTTTCCCTaGCGAGATCCCTGCTTACATCTCCAGCCTGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: AEIPRVLSGLFP*RDPCLHLQPVV Trigger: GACCACAGGCTGGAGATGTAAGCAGGGATCTCGGCAGGGAAACAAACCCGAGAGGACACGTGGGATTTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR-3UTR CAA 90 bp | GCAGATGGTCAAACTGGCTATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTGGCCAAAAAGAGGGCTaGCAAGCCAGGGGTGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: ADGQTGYTRSKGRCSVRGGQKEG*QARGGA Trigger: TGCTCCACCCCTGGCTTGCAAGCCCTCTTTTTGGCC...ACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATAGCCAGTTTGACCATCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR-3UTR CAA 90 bp | TATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTAGAGAGTACCAAAGCCGTGGCCAAAAAGAGGGCTaGCAAGCCAGGGGTGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: YTRSKGRCSVRGREYQSRGQKEG*QARGGA Trigger: TGCTCCACCCCTGGCTTGCAAGCCCTCTTTTTGGCC...ACGGCTTTGGTACTCTCTACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR GCA 72 bp | GATGGTCAAACTGGCTATACAAGGTCAAAAGGGCGGTaGTCGGTAAGAGGTAGAGAGTACCAAAGCCGTGTG | + |
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Preference number: 3 (lower is better) Translates to: DGQTGYTRSKGR*SVRGREYQSRV Trigger: CACACGGCTTTGGTACTCTCTACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATAGCCAGTTTGACCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR CCA 72 bp | GAAGCTGCACTGAGGCTTTTATTACGACAGGGCCTGTaGAGGGAACTACACTACTCCTTTGCCACACTGAAG | + |
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Preference number: 3 (lower is better) Translates to: EAALRLLLRQGL*RELHYSFATLK Trigger: CTTCAGTGTGGCAAAGGAGTAGTGTAGTTCCCTCCACAGGCCCTGTCGTAATAAAAGCCTCAGTGCAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR TCA 72 bp | AACGTCTGCTGCCTCCCTAGGACACCATTGGGACACTaGATTAATGGAGTCTTCTCTGATGAAGGCAACGTC | + |
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Preference number: 3 (lower is better) Translates to: NVCCLPRTPLGH*INGVFSDEGNV Trigger: GACGTTGCCTTCATCAGAGAAGACTCCATTAATTCAGTGTCCCAATGGTGTCCTAGGGAGGCAGCAGACGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR-3UTR CAA 90 bp | GCAGATGGTCAAACTGGCTATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTCAAATGAAAACATTCTaGGTACTTCAGCACCGGCAG | + |
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Preference number: 3 (lower is better) Translates to: ADGQTGYTRSKGRCSVRGQMKTF*VLQHRQ Trigger: CTGCCGGTGCTGAAGTACCAAGAATGTTTTCATTTG...ACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATAGCCAGTTTGACCATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR GCA 72 bp | ACGACAGGGCCTGTGGAGGGAACTACACTACTCCTTTaGCACACTGAAGATACTCATTCCTTAACGATACCT | + |
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Preference number: 3 (lower is better) Translates to: TTGPVEGTTLLL*HTEDTHSLTIP Trigger: AGGTATCGTTAAGGAATGAGTATCTTCAGTGTGGCAAAGGAGTAGTGTAGTTCCCTCCACAGGCCCTGTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR CCA 72 bp | CCACTTGTGAAAACTTCAGCAGTGCAGTTGGTTATCTaGTGTGACACAGGTCAACTCTGGGAGTTGGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: PLVKTSAVQLVI*CDTGQLWELAL Trigger: AAGAGCCAACTCCCAGAGTTGACCTGTGTCACACCAGATAACCAACTGCACTGCTGAAGTTTTCACAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR-3UTR CAA 90 bp | GTGCACAGTAGGCCTACATTAAGAAGCAAAGTAGCCCTCACCTCTATTTTTGGCGGTCAACTCTGGGAGTaGGCTCTTTCCTTCTATCTT | + |
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Preference number: 3 (lower is better) Translates to: VHSRPTLRSKVALTSIFGGQLWE*ALSFYL Trigger: AAGATAGAAGGAAAGAGCCAACTCCCAGAGTTGACC...GCCAAAAATAGAGGTGAGGGCTACTTTGCTTCTTAATGTAGGCCTACTGTGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR TCA 72 bp | TGTGAAAACTTCAGCAGTGCAGTTGGTTATCTGGTGTaGCACAGGTCAACTCTGGGAGTTGGCTCTTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: CENFSSAVGYLV*HRSTLGVGSFL Trigger: AAGGAAAGAGCCAACTCCCAGAGTTGACCTGTGTCACACCAGATAACCAACTGCACTGCTGAAGTTTTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR TCA 72 bp | GCCTGTGGAGGGAACTACACTACTCCTTTGCCACACTaGAGATACTCATTCCTTAACGATACCTTGCAGATC | + |
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Preference number: 3 (lower is better) Translates to: ACGGNYTTPLPH*RYSFLNDTLQI Trigger: GATCTGCAAGGTATCGTTAAGGAATGAGTATCTTCAGTGTGGCAAAGGAGTAGTGTAGTTCCCTCCACAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR CCA 72 bp | GAGTTGGCTCTTTCCTTCTATCTTTTAGATAGGTCCTaGAGACTGGACCCAGTGCCAGGTTCACACAATAAG | + |
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Preference number: 3 (lower is better) Translates to: ELALSFYLLDRS*RLDPVPGSHNK Trigger: CTTATTGTGTGAACCTGGCACTGGGTCCAGTCTCCAGGACCTATCTAAAAGATAGAAGGAAAGAGCCAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR TCA 72 bp | ACTCATTCCTTAACGATACCTTGCAGATCGGGGTTGTaGGTACTGAGAAGGTGCAGTTTGTGGTTAGCACAA | + |
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Preference number: 3 (lower is better) Translates to: THSLTIPCRSGL*VLRRCSLWLAQ Trigger: TTGTGCTAACCACAAACTGCACCTTCTCAGTACTCACAACCCCGATCTGCAAGGTATCGTTAAGGAATGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR GCA 72 bp | CCACCAGTGACTTCGCTGAAGTTTAGAAGGTCACACTaGCGTGGGCTGTTACTGTTTATACTAAATGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: PPVTSLKFRRSH*RGLLLFILNER Trigger: TCTCTCATTTAGTATAAACAGTAACAGCCCACGGCAGTGTGACCTTCTAAACTTCAGCGAAGTCACTGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR GCA 72 bp | CCCTTCATCCAGACACGGGCAGTGACTTACAGAGCTTaGACATGGTTCTGGAACATATTTTTGTTCATGCTT | + |
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Preference number: 3 (lower is better) Translates to: PFIQTRAVTYRA*TWFWNIFLFML Trigger: AAGCATGAACAAAAATATGTTCCAGAACCATGTGCAAGCTCTGTAAGTCACTGCCCGTGTCTGGATGAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR CCA 72 bp | GTGCAGTTGGTTATCTGGTGTGACACAGGTCAACTCTaGGAGTTGGCTCTTTCCTTCTATCTTTTAGATAGG | + |
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Preference number: 3 (lower is better) Translates to: VQLVIWCDTGQL*ELALSFYLLDR Trigger: CCTATCTAAAAGATAGAAGGAAAGAGCCAACTCCCAGAGTTGACCTGTGTCACACCAGATAACCAACTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR CCA 72 bp | ACACGGGCAGTGACTTACAGAGCTTGCACATGGTTCTaGAACATATTTTTGTTCATGCTTCTCCCTGATCCA | + |
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Preference number: 3 (lower is better) Translates to: TRAVTYRACTWF*NIFLFMLLPDP Trigger: TGGATCAGGGAGAAGCATGAACAAAAATATGTTCCAGAACCATGTGCAAGCTCTGTAAGTCACTGCCCGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| 3UTR TCA 72 bp | GCAGAATTGTTCTGTATGAGCAATCGAAGAGCTGTCTaGGGCGAAAAGATATCCCAGCTACCAATTAACCCT | + |
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Preference number: 3 (lower is better) Translates to: AELFCMSNRRAV*GEKISQLPINP Trigger: AGGGTTAATTGGTAGCTGGGATATCTTTTCGCCTCAGACAGCTCTTCGATTGCTCATACAGAACAATTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR TCA 72 bp | TTCTTGGTACTTCAGCACCGGCAGAATTGTTCTGTATaGGCAATCGAAGAGCTGTCTGAGGCGAAAAGATAT | + |
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Preference number: 3 (lower is better) Translates to: FLVLQHRQNCSV*AIEELSEAKRY Trigger: ATATCTTTTCGCCTCAGACAGCTCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTACCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR CCA 72 bp | TATCCCAGCTACCAATTAACCCTGGGTAGCTATGCATaGGTGAGTATCCCTGGGTGTTATTATTTCTTAACG | + |
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Preference number: 3 (lower is better) Translates to: YPSYQLTLGSYA*VSIPGCYYFLT Trigger: CGTTAAGAAATAATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCTGGGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| 3UTR-3UTR CAA 90 bp | GTTAGTACCAGGAGCATCCTAGCATCAAGATGTGAACTGCAGGAAGAAGCTGCAGAAGTCAGAGTTGTTTaGATAACACAATTCAGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: VSTRSILASRCELQEEAAEVRVV*ITQFSY Trigger: GTAGCTGAATTGTGTTATCAAAACAACTCTGACTTC...TGCAGCTTCTTCCTGCAGTTCACATCTTGATGCTAGGATGCTCCTGGTACTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTTTGCACTTCTGGTTGCTTGATGCCCACCTTATATAAAGAATATGCATCTTCAGCACCGGCAGAATaGTTCTGTATGAGCAATCGA | + |
|
Preference number: 3 (lower is better) Translates to: EVCTSGCLMPTLYKEYASSAPAE*FCMSNR Trigger: TCGATTGCTCATACAGAACAATTCTGCCGGTGCTGA...AGATGCATATTCTTTATATAAGGTGGGCATCAAGCAACCAGAAGTGCAAACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| 3UTR TCA 72 bp | GAAGTAAAGGGAGGGAAGTTTGCACTTCTGGTTGCTTaGTGCCCACCTTATATAAAGAATATGCATCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: EVKGGKFALLVA*CPPYIKNMHLT Trigger: AGTGAGATGCATATTCTTTATATAAGGTGGGCATCAAGCAACCAGAAGTGCAAACTTCCCTCCCTTTACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| 3UTR TCA 72 bp | TATAAGAACAACAGTTTCCCTTTGGTAGCTCCTGTCTaGGACAGATGCAGAACTCAGAGTATTACAAATAAG | + |
|
Preference number: 3 (lower is better) Translates to: YKNNSFPLVAPV*DRCRTQSITNK Trigger: CTTATTTGTAATACTCTGAGTTCTGCATCTGTCTCAGACAGGAGCTACCAAAGGGAAACTGTTGTTCTTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| 3UTR TCA 72 bp | ACACATTTGATAAGGTTTTCCAACAAAGATAATCACTaGTTCGCAGGATCGATACAAGATAGAAAACAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: THLIRFSNKDNH*FAGSIQDRKQS Trigger: GCTCTGTTTTCTATCTTGTATCGATCCTGCGAATCAGTGATTATCTTTGTTGGAAAACCTTATCAAATGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCAGATGGTCAAACTGGCTATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTTTCAGCCCGACGACCTaGGCGGAGGGGGAGGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ADGQTGYTRSKGRCSVRGFSPTT*AEGEGE Trigger: CTCCCCCTCCCCCTCCGCTCAGGTCGTCGGGCTGAA...ACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATAGCCAGTTTGACCATCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | AGCTACCAATTAACCCTGGGTAGCTATGCATGGGTGAGTATCCCTGGGTGTTATTTCAGCCCGACGACCTaGGCGGAGGGGGAGGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SYQLTLGSYAWVSIPGCYFSPTT*AEGEGE Trigger: CTCCCCCTCCCCCTCCGCTCAGGTCGTCGGGCTGAA...ATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTATTCAGCCCGACGACCTaGGCGGAGGGGGAGGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLFSPTT*AEGEGE Trigger: CTCCCCCTCCCCCTCCGCTCAGGTCGTCGGGCTGAA...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | TATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTAGAGAGTACCAAAGCCGTCTCTCATTGGAGAGCTaGTGCACCAGGGCTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YTRSKGRCSVRGREYQSRLSLES*CTRARP Trigger: GGGCCGAGCCCTGGTGCACCAGCTCTCCAATGAGAG...ACGGCTTTGGTACTCTCTACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| 3UTR CAA 72 bp | GGCGGCCTCTCGAGCAGGCCTACTTCACAGTCAGTATaGCTGAAATCCCACGTGTCCTCTCGGGTTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGLSSRPTSQSV*LKSHVSSRVCF Trigger: GAAACAAACCCGAGAGGACACGTGGGATTTCAGCAATACTGACTGTGAAGTAGGCCTGCTCGAGAGGCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | AGCTACCAATTAACCCTGGGTAGCTATGCATGGGTGAGTATCCCTGGGTGTTATCTCTCATTGGAGAGCTaGTGCACCAGGGCTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SYQLTLGSYAWVSIPGCYLSLES*CTRARP Trigger: GGGCCGAGCCCTGGTGCACCAGCTCTCCAATGAGAG...ATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GTTAGTACCAGGAGCATCCTAGCATCAAGATGTGAACTGCAGGAAGAAGCTGCATCATTGGAGAGCTGGTaGACCAGGGCTCGGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSTRSILASRCELQEEAASLESW*TRARPS Trigger: TGAGGGCCGAGCCCTGGTGCACCAGCTCTCCAATGA...TGCAGCTTCTTCCTGCAGTTCACATCTTGATGCTAGGATGCTCCTGGTACTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | TACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGAGCTGTCTGAGGTTCCCAAACAGCCGGTaGACAGCCTTCCCACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YFSTGRIVLYEQSKSCLRFPNSR*TAFPLR Trigger: CCGCAGTGGGAAGGCTGTGCACCGGCTGTTTGGGAA...CCTCAGACAGCTCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | TATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTAGAGAGTACCAAAGCCGTGATGGCGTTGATGGCTaGCGCCGAGTATGTCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: YTRSKGRCSVRGREYQSRDGVDG*RRVCPM Trigger: CATCGGACATACTCGGCGCCAGCCATCAACGCCATC...ACGGCTTTGGTACTCTCTACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| 3UTR CAA 72 bp | GTCAGTATTGCTGAAATCCCACGTGTCCTCTCGGGTTaGTTTCCCTGCCGAGATCCCTGCTTACATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSIAEIPRVLSG*FPCRDPCLHLQ Trigger: CTGGAGATGTAAGCAGGGATCTCGGCAGGGAAACAAACCCGAGAGGACACGTGGGATTTCAGCAATACTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | ACCCAGCTGCTTAGAAATGGAAATGAGATTCATGCTGCGTTCATCTTGGTGTCTGGACCTGGATGGCGTTaGTGGCTGGCGCCGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: TQLLRNGNEIHAAFILVSGPGWR*WLAPSM Trigger: CATACTCGGCGCCAGCCATCAACGCCATCCAGGTCC...AGACACCAAGATGAACGCAGCATGAATCTCATTTCCATTTCTAAGCAGCTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GCAGATGGTCAAACTGGCTATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTGCCGAGTATGTCCGATaGAGGACGTCCATGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ADGQTGYTRSKGRCSVRGAEYVR*RTSMLS Trigger: AGAAAGCATGGACGTCCTGCATCGGACATACTCGGC...ACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATAGCCAGTTTGACCATCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | TATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTAGAGAGTACCAAAGCCGTCGCCGCCACAGTAGATaGTCTCGTGCCATTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YTRSKGRCSVRGREYQSRRRHSR*SRAISQ Trigger: TTGGGAAATGGCACGAGAGCATCTACTGTGGCGGCG...ACGGCTTTGGTACTCTCTACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACTCTCATTGGAGAGCTaGTGCACCAGGGCTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLLSLES*CTRARP Trigger: GGGCCGAGCCCTGGTGCACCAGCTCTCCAATGAGAG...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGCTCTCATTGGAGAGCTaGTGCACCAGGGCTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRLSLES*CTRARP Trigger: GGGCCGAGCCCTGGTGCACCAGCTCTCCAATGAGAG...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GCAGATGGTCAAACTGGCTATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTAGCTGGTCCTCCTTTTaGATCTGGCTTCCCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: ADGQTGYTRSKGRCSVRGSWSSF*IWLPHY Trigger: GTAGTGGGGAAGCCAGATCCAAAAGGAGGACCAGCT...ACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATAGCCAGTTTGACCATCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GTTAGTACCAGGAGCATCCTAGCATCAAGATGTGAACTGCAGGAAGAAGCTGCACTGAAAAACCGGGGCTaGTGCTCCACACCGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSTRSILASRCELQEEAALKNRG*CSTPFS Trigger: GGAGAACGGTGTGGAGCACCAGCCCCGGTTTTTCAG...TGCAGCTTCTTCCTGCAGTTCACATCTTGATGCTAGGATGCTCCTGGTACTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATGGACCTGGATGGCGTTaGTGGCTGGCGCCGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHGPGWR*WLAPSM Trigger: CATACTCGGCGCCAGCCATCAACGCCATCCAGGTCC...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071728.11 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTTCAGCCCGACGACCTaGGCGGAGGGGGAGGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHFSPTT*AEGEGE Trigger: CTCCCCCTCCCCCTCCGCTCAGGTCGTCGGGCTGAA...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | TATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTAGAGAGTACCAAAGCCGTAGCAAAAATCCTTTCTaGACTGGCGGCTCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YTRSKGRCSVRGREYQSRSKNPF*TGGSWV Trigger: CACCCAGGAGCCGCCAGTGCAGAAAGGATTTTTGCT...ACGGCTTTGGTACTCTCTACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGTCATTGGAGAGCTGGTaGACCAGGGCTCGGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRSLESW*TRARPS Trigger: TGAGGGCCGAGCCCTGGTGCACCAGCTCTCCAATGA...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGTTCCCAAACAGCCGGTaGACAGCCTTCCCACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRFPNSR*TAFPLR Trigger: CCGCAGTGGGAAGGCTGTGCACCGGCTGTTTGGGAA...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | TACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGAGCTGTCTGAGGCGCCGCCACAGTAGATaGTCTCGTGCCATTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YFSTGRIVLYEQSKSCLRRRHSR*SRAISQ Trigger: TTGGGAAATGGCACGAGAGCATCTACTGTGGCGGCG...CCTCAGACAGCTCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | TACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGAGCTGTCTGAGGGCCGGCTTCCTTGCTTaGAGGAGCAACTACTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YFSTGRIVLYEQSKSCLRAGFLA*RSNYLC Trigger: GCACAAGTAGTTGCTCCTCCAAGCAAGGAAGCCGGC...CCTCAGACAGCTCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| 3UTR CAA 72 bp | TCAGGAAGCCCCCAGAGGCACTGGAAGGCTTGGGGATaGCTGAGGCATTCTTGCTACTTAGTAGGTAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGSPQRHWKAWG*LRHSCYLVGNC Trigger: ACAATTACCTACTAAGTAGCAAGAATGCCTCAGCAATCCCCAAGCCTTCCAGTGCCTCTGGGGGCTTCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACGGTACATTCTGTGGTaGCGGAGCTTGGACACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLRYILW*RSLDTH Trigger: GTGGGTGTCCAAGCTCCGTCACCACAGAATGTACCG...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | TACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGAGCTGTCTGAGGCTGGGGCAGAATCTGTaGCAGAGGACCCTGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YFSTGRIVLYEQSKSCLRLGQNL*QRTLRK Trigger: TTTTCTCAGGGTCCTCTGTCACAGATTCTGCCCCAG...CCTCAGACAGCTCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | TATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTAGAGAGTACCAAAGCCGTGCCACCACAAGAAAATaGCAAATTGCTTCCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTRSKGRCSVRGREYQSRATTRK*QIASGW Trigger: CCACCCGGAAGCAATTTGTCATTTTCTTGTGGTGGC...ACGGCTTTGGTACTCTCTACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCACCCTGGATGGCGTTaGTGGCTGGCGCCGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFHPGWR*WLAPSM Trigger: CATACTCGGCGCCAGCCATCAACGCCATCCAGGGTG...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114466.8 |
||
| CDS-3UTR GCA 90 bp | TATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTAGAGAGTACCAAAGCCGTGATGCAGGACGTCCATaGTTTCTAAGAGCTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YTRSKGRCSVRGREYQSRDAGRP*FLRAGS Trigger: TGAGCCAGCTCTTAGAAAGCATGGACGTCCTGCATC...ACGGCTTTGGTACTCTCTACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | AGCTACCAATTAACCCTGGGTAGCTATGCATGGGTGAGTATCCCTGGGTGTTATGCCGAGTATGTCCGATaGAGGACGTCCATGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SYQLTLGSYAWVSIPGCYAEYVR*RTSMLS Trigger: AGAAAGCATGGACGTCCTGCATCGGACATACTCGGC...ATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATTCATTGGAGAGCTGGTaGACCAGGGCTCGGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHSLESW*TRARPS Trigger: TGAGGGCCGAGCCCTGGTGCACCAGCTCTCCAATGA...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GTGCACAGTAGGCCTACATTAAGAAGCAAAGTAGCCCTCACCTCTATTTTTGGCGCCGGCTTCCTTGCTTaGAGGAGCAACTACTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHSRPTLRSKVALTSIFGAGFLA*RSNYLC Trigger: GCACAAGTAGTTGCTCCTCCAAGCAAGGAAGCCGGC...GCCAAAAATAGAGGTGAGGGCTACTTTGCTTCTTAATGTAGGCCTACTGTGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | AGCTACCAATTAACCCTGGGTAGCTATGCATGGGTGAGTATCCCTGGGTGTTATAGCTGGTCCTCCTTTTaGATCTGGCTTCCCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SYQLTLGSYAWVSIPGCYSWSSF*IWLPHY Trigger: GTAGTGGGGAAGCCAGATCCAAAAGGAGGACCAGCT...ATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | AGCTACCAATTAACCCTGGGTAGCTATGCATGGGTGAGTATCCCTGGGTGTTATGTGCCTTCGATCTCGTaGGCATTAGTGCTCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SYQLTLGSYAWVSIPGCYVPSIS*ALVLQY Trigger: GTACTGGAGCACTAATGCCCACGAGATCGAAGGCAC...ATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GTTAGTACCAGGAGCATCCTAGCATCAAGATGTGAACTGCAGGAAGAAGCTGCAGTGCCTTCGATCTCGTaGGCATTAGTGCTCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VSTRSILASRCELQEEAAVPSIS*ALVLQY Trigger: GTACTGGAGCACTAATGCCCACGAGATCGAAGGCAC...TGCAGCTTCTTCCTGCAGTTCACATCTTGATGCTAGGATGCTCCTGGTACTAAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | TACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGAGCTGTCTGAGGCATAGCCTTTCGGCATaGGATTTGCTCTCCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: YFSTGRIVLYEQSKSCLRHSLSA*DLLSRR Trigger: GCGTCTGGAGAGCAAATCCCATGCCGAAAGGCTATG...CCTCAGACAGCTCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACTGAAAAACCGGGGCTaGTGCTCCACACCGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLLKNRG*CSTPFS Trigger: GGAGAACGGTGTGGAGCACCAGCCCCGGTTTTTCAG...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCAGATGGTCAAACTGGCTATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTTTGTTCCACTCAAAGTaGTCTCCAAAAGCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ADGQTGYTRSKGRCSVRGLFHSK*SPKAGR Trigger: TCTGCCTGCTTTTGGAGATCACTTTGAGTGGAACAA...ACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATAGCCAGTTTGACCATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GTGCACAGTAGGCCTACATTAAGAAGCAAAGTAGCCCTCACCTCTATTTTTGGCTCCTGCCGGCTTCCTTaGTTGGAGGAGCAACTACTT | + |
|
Preference number: 4 (lower is better) Translates to: VHSRPTLRSKVALTSIFGSCRLP*LEEQLL Trigger: AAGTAGTTGCTCCTCCAAGCAAGGAAGCCGGCAGGA...GCCAAAAATAGAGGTGAGGGCTACTTTGCTTCTTAATGTAGGCCTACTGTGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | TACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGAGCTGTCTGAGGGATGCAGGACGTCCATaGTTTCTAAGAGCTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YFSTGRIVLYEQSKSCLRDAGRP*FLRAGS Trigger: TGAGCCAGCTCTTAGAAAGCATGGACGTCCTGCATC...CCTCAGACAGCTCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | AGCTACCAATTAACCCTGGGTAGCTATGCATGGGTGAGTATCCCTGGGTGTTATTCGGAAGTAGCTGGATaGATATGCGGAGATGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SYQLTLGSYAWVSIPGCYSEVAG*ICGDGE Trigger: TTCGCCATCTCCGCATATGCATCCAGCTACTTCCGA...ATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | CAGCAATGTTTGTCTATAAGGCAGATGGTCAAACTGGCTATACAAGGTCAAAAGTTCCCAAACAGCCGGTaGACAGCCTTCCCACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QQCLSIRQMVKLAIQGQKFPNSR*TAFPLR Trigger: CCGCAGTGGGAAGGCTGTGCACCGGCTGTTTGGGAA...CTTTTGACCTTGTATAGCCAGTTTGACCATCTGCCTTATAGACAAACATTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACGCCGCCACAGTAGATaGTCTCGTGCCATTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLRRHSR*SRAISQ Trigger: TTGGGAAATGGCACGAGAGCATCTACTGTGGCGGCG...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGGCCGGCTTCCTTGCTTaGAGGAGCAACTACTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRAGFLA*RSNYLC Trigger: GCACAAGTAGTTGCTCCTCCAAGCAAGGAAGCCGGC...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | AGCTACCAATTAACCCTGGGTAGCTATGCATGGGTGAGTATCCCTGGGTGTTATTCCTCCTTTTGGATCTaGCTTCCCCACTACTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SYQLTLGSYAWVSIPGCYSSFWI*LPHYSR Trigger: TCGAGAGTAGTGGGGAAGCCAGATCCAAAAGGAGGA...ATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTAGAGATAGGTGGGTGGTaGCTGACCTGCTCGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLEIGGW*LTCSAK Trigger: TTTTGCCGAGCAGGTCAGCCACCACCCACCTATCTC...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATGCAGGCAGAGTCACGTaGGTTGTGCCAATCGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHAGRVT*VVPIGT Trigger: TGTCCCGATTGGCACAACCCACGTGACTCTGCCTGC...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | TATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTAGAGAGTACCAAAGCCGTAGCAGAGATTCCGCATaGATTCTGCGTAAGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YTRSKGRCSVRGREYQSRSRDSA*ILRKRS Trigger: AGAACGCTTACGCAGAATCCATGCGGAATCTCTGCT...ACGGCTTTGGTACTCTCTACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | AGCTACCAATTAACCCTGGGTAGCTATGCATGGGTGAGTATCCCTGGGTGTTATCTGAGAAAAAGTGATTaGCATCCCGGGGAAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: SYQLTLGSYAWVSIPGCYLRKSD*HPGETW Trigger: CCATGTTTCCCCGGGATGTCAATCACTTTTTCTCAG...ATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGCTGGGGCAGAATCTGTaGCAGAGGACCCTGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRLGQNL*QRTLRK Trigger: TTTTCTCAGGGTCCTCTGTCACAGATTCTGCCCCAG...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACTGGGGCAGAATCTGTaGCAGAGGACCCTGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLLGQNL*QRTLRK Trigger: TTTTCTCAGGGTCCTCTGTCACAGATTCTGCCCCAG...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GTGCACAGTAGGCCTACATTAAGAAGCAAAGTAGCCCTCACCTCTATTTTTGGCGCCACCACAAGAAAATaGCAAATTGCTTCCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHSRPTLRSKVALTSIFGATTRK*QIASGW Trigger: CCACCCGGAAGCAATTTGTCATTTTCTTGTGGTGGC...GCCAAAAATAGAGGTGAGGGCTACTTTGCTTCTTAATGTAGGCCTACTGTGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCACCCTGGATGGCGTTaGTGGCTGGCGCCGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDHPGWR*WLAPSM Trigger: CATACTCGGCGCCAGCCATCAACGCCATCCAGGGTG...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114466.8 |
||
| CDS-3UTR GCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGTCCTGCCGGCTTCCTTaGTTGGAGGAGCAACTACTT | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRSCRLP*LEEQLL Trigger: AAGTAGTTGCTCCTCCAAGCAAGGAAGCCGGCAGGA...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGAGCAAAAATCCTTTCTaGACTGGCGGCTCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRSKNPF*TGGSWV Trigger: CACCCAGGAGCCGCCAGTGCAGAAAGGATTTTTGCT...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTAAGCAAAAATCCTTTCTaGACTGGCGGCTCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLSKNPF*TGGSWV Trigger: CACCCAGGAGCCGCCAGTGCAGAAAGGATTTTTGCT...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | ACCCAGCTGCTTAGAAATGGAAATGAGATTCATGCTGCGTTCATCTTGGTGTCTAGCAAAAATCCTTTCTaGACTGGCGGCTCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TQLLRNGNEIHAAFILVSSKNPF*TGGSWV Trigger: CACCCAGGAGCCGCCAGTGCAGAAAGGATTTTTGCT...AGACACCAAGATGAACGCAGCATGAATCTCATTTCCATTTCTAAGCAGCTGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGGCCGAGTATGTCCGATaGAGGACGTCCATGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRAEYVR*RTSMLS Trigger: AGAAAGCATGGACGTCCTGCATCGGACATACTCGGC...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTAGCCGAGTATGTCCGATaGAGGACGTCCATGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLAEYVR*RTSMLS Trigger: AGAAAGCATGGACGTCCTGCATCGGACATACTCGGC...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | CAGCAATGTTTGTCTATAAGGCAGATGGTCAAACTGGCTATACAAGGTCAAAAGCCTGGAGTTTTCCTCTaGCAGGTTGTCCCCCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QQCLSIRQMVKLAIQGQKPGVFL*QVVPRL Trigger: AAGCCGGGGGACAACCTGGCAGAGGAAAACTCCAGG...CTTTTGACCTTGTATAGCCAGTTTGACCATCTGCCTTATAGACAAACATTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCGATGGCGTTGATGGCTaGCGCCGAGTATGTCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFDGVDG*RRVCPM Trigger: CATCGGACATACTCGGCGCCAGCCATCAACGCCATC...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGGATCCTCCTGCATCTTaGAGAACTCCGACGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRDPPAS*RTPTRL Trigger: AAGCCTCGTCGGAGTTCTCCAAGATGCAGGAGGATC...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTAGATCCTCCTGCATCTTaGAGAACTCCGACGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLDPPAS*RTPTRL Trigger: AAGCCTCGTCGGAGTTCTCCAAGATGCAGGAGGATC...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | AGCTACCAATTAACCCTGGGTAGCTATGCATGGGTGAGTATCCCTGGGTGTTATAAGTTCACTTTGCAGTaGCAGGAGTCGTCATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SYQLTLGSYAWVSIPGCYKFTLQ*QESSFR Trigger: CCTGAATGACGACTCCTGCCACTGCAAAGTGAACTT...ATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTAGTGCCTTCGATCTCGTaGGCATTAGTGCTCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLVPSIS*ALVLQY Trigger: GTACTGGAGCACTAATGCCCACGAGATCGAAGGCAC...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATAGCCTTTCGGCATaGGATTTGCTCTCCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLHSLSA*DLLSRR Trigger: GCGTCTGGAGAGCAAATCCCATGCCGAAAGGCTATG...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | CAGCAATGTTTGTCTATAAGGCAGATGGTCAAACTGGCTATACAAGGTCAAAAGCTGAAAAACCGGGGCTaGTGCTCCACACCGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QQCLSIRQMVKLAIQGQKLKNRG*CSTPFS Trigger: GGAGAACGGTGTGGAGCACCAGCCCCGGTTTTTCAG...CTTTTGACCTTGTATAGCCAGTTTGACCATCTGCCTTATAGACAAACATTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | TACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGAGCTGTCTGAGGCACCATAAGACGGGATaGTCCAACTTGGAAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YFSTGRIVLYEQSKSCLRHHKTG*SNLEKP Trigger: TGGCTTTTCCAAGTTGGACCATCCCGTCTTATGGTG...CCTCAGACAGCTCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGCCGCCACCTCCTGTGTaGTCGTTTTTCCTTTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRPPPPV*SFFLFG Trigger: CCCAAAAAGGAAAAACGACCACACAGGAGGTGGCGG...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114466.8 |
||
| CDS-3UTR TCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGGACCCTGAGAAAAAGTaGTTGACATCCCGGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRDPEKK*LTSRGN Trigger: GTTTCCCCGGGATGTCAATCACTTTTTCTCAGGGTC...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTAGCCACCACAAGAAAATaGCAAATTGCTTCCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLATTRK*QIASGW Trigger: CCACCCGGAAGCAATTTGTCATTTTCTTGTGGTGGC...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATTCGATCCTCTGCTTCTaGACCTCAGCCTCCTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHSILCF*TSASSM Trigger: CATAGAGGAGGCTGAGGTTCAGAAGCAGAGGATCGA...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | ACCCAGCTGCTTAGAAATGGAAATGAGATTCATGCTGCGTTCATCTTGGTGTCTTTAGGATTGGAGGAGTaGAGTCTCACAGGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TQLLRNGNEIHAAFILVSLGLEE*SLTGPE Trigger: TTCTGGCCCTGTGAGACTGCACTCCTCCAATCCTAA...AGACACCAAGATGAACGCAGCATGAATCTCATTTCCATTTCTAAGCAGCTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCATTGGAGAGCTGGTaGACCAGGGCTCGGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHSLESW*TRARPS Trigger: TGAGGGCCGAGCCCTGGTGCACCAGCTCTCCAATGA...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTATCGGAAGTAGCTGGATaGATATGCGGAGATGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLSEVAG*ICGDGE Trigger: TTCGCCATCTCCGCATATGCATCCAGCTACTTCCGA...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATTTCCCAAACAGCCGGTaGACAGCCTTCCCACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDFPNSR*TAFPLR Trigger: CCGCAGTGGGAAGGCTGTGCACCGGCTGTTTGGGAA...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGCCGCCACAGTAGATaGTCTCGTGCCATTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFRRHSR*SRAISQ Trigger: TTGGGAAATGGCACGAGAGCATCTACTGTGGCGGCG...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCGCCGGCTTCCTTGCTTaGAGGAGCAACTACTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFAGFLA*RSNYLC Trigger: GCACAAGTAGTTGCTCCTCCAAGCAAGGAAGCCGGC...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGAAATCCTTTCTGCACTaGCGGCTCCTGGGTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRKSFLH*RLLGVS Trigger: ACTTACACCCAGGAGCCGCCAGTGCAGAAAGGATTT...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTCTCGGCCCTCATCCCTaGAGTTTTCGGATGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSAYNATLSTSDHSRCYLLGPHP*SFRMTE Trigger: CTCTGTCATCCGAAAACTCCAGGGATGAGGGCCGAG...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071728.11 ENSMUST00000114466.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTATCCTCCTTTTGGATCTaGCTTCCCCACTACTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLSSFWI*LPHYSR Trigger: TCGAGAGTAGTGGGGAAGCCAGATCCAAAAGGAGGA...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GAAGTTTGCACTTCTGGTTGCTTGATGCCCACCTTATATAAAGAATATGCATCTGCAGGCAGAGTCACGTaGGTTGTGCCAATCGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: EVCTSGCLMPTLYKEYASAGRVT*VVPIGT Trigger: TGTCCCGATTGGCACAACCCACGTGACTCTGCCTGC...AGATGCATATTCTTTATATAAGGTGGGCATCAAGCAACCAGAAGTGCAAACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACGGGATGGTCCAACTTaGAAAAGCCAAGGTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLRDGPT*KSQGLS Trigger: GGAAAGACCTTGGCTTTTCCAAGTTGGACCATCCCG...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGCGGGATGGTCCAACTTaGAAAAGCCAAGGTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRRDGPT*KSQGLS Trigger: GGAAAGACCTTGGCTTTTCCAAGTTGGACCATCCCG...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| 3UTR CAA 72 bp | GCCCTTCATCCAGACACGGGCAGTGACTTACAGAGCTaGCACATGGTTCTGGAACATATTTTTGTTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALHPDTGSDLQS*HMVLEHIFVHA Trigger: AGCATGAACAAAAATATGTTCCAGAACCATGTGCAAGCTCTGTAAGTCACTGCCCGTGTCTGGATGAAGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGCTGAGAAAAAGTGATTaGCATCCCGGGGAAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRLRKSD*HPGETW Trigger: CCATGTTTCCCCGGGATGTCAATCACTTTTTCTCAG...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATGACCCTGAGAAAAAGTaGTTGACATCCCGGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHDPEKK*LTSRGN Trigger: GTTTCCCCGGGATGTCAATCACTTTTTCTCAGGGTC...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTCTGGGGCAGAATCTGTaGCAGAGGACCCTGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSAYNATLSTSDHSRCYLLGQNL*QRTLRK Trigger: TTTTCTCAGGGTCCTCTGTCACAGATTCTGCCCCAG...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GTTAGTACCAGGAGCATCCTAGCATCAAGATGTGAACTGCAGGAAGAAGCTGCACTAGTGCAAACTGTGTaGAGCCATAATACTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSTRSILASRCELQEEAALVQTV*SHNTAH Trigger: ATGAGCAGTATTATGGCTTCACACAGTTTGCACTAG...TGCAGCTTCTTCCTGCAGTTCACATCTTGATGCTAGGATGCTCCTGGTACTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTTCGATCCTCTGCTTCTaGACCTCAGCCTCCTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: FSAYNATLSTSDHSRCYLSILCF*TSASSM Trigger: CATAGAGGAGGCTGAGGTTCAGAAGCAGAGGATCGA...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | AGCTACCAATTAACCCTGGGTAGCTATGCATGGGTGAGTATCCCTGGGTGTTATAGGAGCAACTACTTGTaGTTCTTGAAGGTGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SYQLTLGSYAWVSIPGCYRSNYL*FLKVKP Trigger: TGGTTTCACCTTCAAGAAGCACAAGTAGTTGCTCCT...ATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | ACCCAGCTGCTTAGAAATGGAAATGAGATTCATGCTGCGTTCATCTTGGTGTCTCAGAAGAATCTCTTGTaGCAGCCTTTTAAGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQLLRNGNEIHAAFILVSQKNLL*QPFKGH Trigger: GTGGCCCTTAAAAGGCTGGCACAAGAGATTCTTCTG...AGACACCAAGATGAACGCAGCATGAATCTCATTTCCATTTCTAAGCAGCTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATGATGCAGGACGTCCATaGTTTCTAAGAGCTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHDAGRP*FLRAGS Trigger: TGAGCCAGCTCTTAGAAAGCATGGACGTCCTGCATC...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | AACATTCTTGGTACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGATCCAGCTCCATCAGCTaGTTCAGTTTCTCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NILGTSAPAELFCMSNRRSSSIS*FSFSLS Trigger: GGAGAGAGAGAAACTGAAGCAGCTGATGGAGCTGGA...TCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTACCAAGAATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATCCTGGAGTTTTCCTCTaGCAGGTTGTCCCCCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHPGVFL*QVVPRL Trigger: AAGCCGGGGGACAACCTGGCAGAGGAAAACTCCAGG...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATGATGGCGTTGATGGCTaGCGCCGAGTATGTCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDDGVDG*RRVCPM Trigger: CATCGGACATACTCGGCGCCAGCCATCAACGCCATC...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTGATCCTCCTGCATCTTaGAGAACTCCGACGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSAYNATLSTSDHSRCYLDPPAS*RTPTRL Trigger: AAGCCTCGTCGGAGTTCTCCAAGATGCAGGAGGATC...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | CAAGAGGACGACATAGAAGAACAGCAATGTTTGTCTATAAGGCAGATGGTCAAAGATCCTCCTGCATCTTaGAGAACTCCGACGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEDDIEEQQCLSIRQMVKDPPAS*RTPTRL Trigger: AAGCCTCGTCGGAGTTCTCCAAGATGCAGGAGGATC...TTTGACCATCTGCCTTATAGACAAACATTGCTGTTCTTCTATGTCGTCCTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTAGCTGGTCCTCCTTTTaGATCTGGCTTCCCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: FSAYNATLSTSDHSRCYLSWSSF*IWLPHY Trigger: GTAGTGGGGAAGCCAGATCCAAAAGGAGGACCAGCT...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCAGCTGGTCCTCCTTTTaGATCTGGCTTCCCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFSWSSF*IWLPHY Trigger: GTAGTGGGGAAGCCAGATCCAAAAGGAGGACCAGCT...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCTGCTCGGAAGTAGCTaGATGCATATGCGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFLLGSS*MHMRRW Trigger: CCATCTCCGCATATGCATCCAGCTACTTCCGAGCAG...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | CAAGAGGACGACATAGAAGAACAGCAATGTTTGTCTATAAGGCAGATGGTCAAACTGCTCGGAAGTAGCTaGATGCATATGCGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QEDDIEEQQCLSIRQMVKLLGSS*MHMRRW Trigger: CCATCTCCGCATATGCATCCAGCTACTTCCGAGCAG...TTTGACCATCTGCCTTATAGACAAACATTGCTGTTCTTCTATGTCGTCCTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | GAAGTTTGCACTTCTGGTTGCTTGATGCCCACCTTATATAAAGAATATGCATCTGAGATAGGTGGGTGGTaGCTGACCTGCTCGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EVCTSGCLMPTLYKEYASEIGGW*LTCSAK Trigger: TTTTGCCGAGCAGGTCAGCCACCACCCACCTATCTC...AGATGCATATTCTTTATATAAGGTGGGCATCAAGCAACCAGAAGTGCAAACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATGCAGGCAGAGTCACGTaGGTTGTGCCAATCGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDAGRVT*VVPIGT Trigger: TGTCCCGATTGGCACAACCCACGTGACTCTGCCTGC...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | ACCCAGCTGCTTAGAAATGGAAATGAGATTCATGCTGCGTTCATCTTGGTGTCTAAGTTCACTTTGCAGTaGCAGGAGTCGTCATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQLLRNGNEIHAAFILVSKFTLQ*QESSFR Trigger: CCTGAATGACGACTCCTGCCACTGCAAAGTGAACTT...AGACACCAAGATGAACGCAGCATGAATCTCATTTCCATTTCTAAGCAGCTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTCATAGCCTTTCGGCATaGGATTTGCTCTCCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: FSAYNATLSTSDHSRCYLHSLSA*DLLSRR Trigger: GCGTCTGGAGAGCAAATCCCATGCCGAAAGGCTATG...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | CAGCAATGTTTGTCTATAAGGCAGATGGTCAAACTGGCTATACAAGGTCAAAAGCCGCCACCTCCTGTGTaGTCGTTTTTCCTTTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQCLSIRQMVKLAIQGQKPPPPV*SFFLFG Trigger: CCCAAAAAGGAAAAACGACCACACAGGAGGTGGCGG...CTTTTGACCTTGTATAGCCAGTTTGACCATCTGCCTTATAGACAAACATTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000090019.10 |
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| 3UTR CAA 72 bp | TTGGTTATCTGGTGTGACACAGGTCAACTCTGGGAGTaGGCTCTTTCCTTCTATCTTTTAGATAGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVIWCDTGQLWE*ALSFYLLDRSW Trigger: CCAGGACCTATCTAAAAGATAGAAGGAAAGAGCCAACTCCCAGAGTTGACCTGTGTCACACCAGATAACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
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| CDS-3UTR TCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTAGTCAAAGAGTTCTTCTaGCTTCACCTTCAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLVKEFF*LHLQVV Trigger: TACCACCTGAAGGTGAAGTCAGAAGAACTCTTTGAC...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTGCCACCACAAGAAAATaGCAAATTGCTTCCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSAYNATLSTSDHSRCYLATTRK*QIASGW Trigger: CCACCCGGAAGCAATTTGTCATTTTCTTGTGGTGGC...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR TCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTAAGAAATCTCGTTTTCTaGAGAGCTAGGAGACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLRNLVF*RARRQQ Trigger: CTGCTGTCTCCTAGCTCTTCAGAAAACGAGATTTCT...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTATTGTTCCACTCAAAGTaGTCTCCAAAAGCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLLFHSK*SPKAGR Trigger: TCTGCCTGCTTTTGGAGATCACTTTGAGTGGAACAA...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCTTAGGATTGGAGGAGTaGAGTCTCACAGGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFLGLEE*SLTGPE Trigger: TTCTGGCCCTGTGAGACTGCACTCCTCCAATCCTAA...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCTCGGAAGTAGCTGGATaGATATGCGGAGATGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFSEVAG*ICGDGE Trigger: TTCGCCATCTCCGCATATGCATCCAGCTACTTCCGA...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | TACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGAGCTGTCTGAGGTATCAGCTTGGCTCTTaGCATATTTCAAGATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: YFSTGRIVLYEQSKSCLRYQLGS*HISRFP Trigger: AGGGAATCTTGAAATATGCCAAGAGCCAAGCTGATA...CCTCAGACAGCTCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATGAGATAGGTGGGTGGTaGCTGACCTGCTCGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDEIGGW*LTCSAK Trigger: TTTTGCCGAGCAGGTCAGCCACCACCCACCTATCTC...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATGAGATAGGTGGGTGGTaGCTGACCTGCTCGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHEIGGW*LTCSAK Trigger: TTTTGCCGAGCAGGTCAGCCACCACCCACCTATCTC...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTCGGGATGGTCCAACTTaGAAAAGCCAAGGTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSAYNATLSTSDHSRCYLRDGPT*KSQGLS Trigger: GGAAAGACCTTGGCTTTTCCAAGTTGGACCATCCCG...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGACGACATAGAAGAACAGCAATGTTTGTCTATAAGGCAGATGGTCAAACGGGATGGTCCAACTTaGAAAAGCCAAGGTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QEDDIEEQQCLSIRQMVKRDGPT*KSQGLS Trigger: GGAAAGACCTTGGCTTTTCCAAGTTGGACCATCCCG...TTTGACCATCTGCCTTATAGACAAACATTGCTGTTCTTCTATGTCGTCCTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | AACATTCTTGGTACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGACACCATAAGACGGGATaGTCCAACTTGGAAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NILGTSAPAELFCMSNRRHHKTG*SNLEKP Trigger: TGGCTTTTCCAAGTTGGACCATCCCGTCTTATGGTG...TCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTACCAAGAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATGTCAAAGAGTTCTTCTaGCTTCACCTTCAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHVKEFF*LHLQVV Trigger: TACCACCTGAAGGTGAAGTCAGAAGAACTCTTTGAC...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGGTGTGCCATGTCTTTTaGACATTTTTCCATGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRVCHVF*TFFHVL Trigger: GAGGACATGGAAAAATGTTCAAAAGACATGGCACAC...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GTTAGTACCAGGAGCATCCTAGCATCAAGATGTGAACTGCAGGAAGAAGCTGCATATGTCACTGACGTATaGATCATCATCAGAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTRSILASRCELQEEAAYVTDV*IIIRNL Trigger: GAGATTTCTGATGATGATTCATACGTCAGTGACATA...TGCAGCTTCTTCCTGCAGTTCACATCTTGATGCTAGGATGCTCCTGGTACTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GTTAGTACCAGGAGCATCCTAGCATCAAGATGTGAACTGCAGGAAGAAGCTGCATATCACTTATGTCACTaGCGTATGAATCATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSTRSILASRCELQEEAAYHLCH*RMNHHQ Trigger: CTGATGATGATTCATACGTCAGTGACATAAGTGATA...TGCAGCTTCTTCCTGCAGTTCACATCTTGATGCTAGGATGCTCCTGGTACTAAC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATTTGTTCCACTCAAAGTaGTCTCCAAAAGCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHLFHSK*SPKAGR Trigger: TCTGCCTGCTTTTGGAGATCACTTTGAGTGGAACAA...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGCTAGTGCAAACTGTGTaGAGCCATAATACTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRLVQTV*SHNTAH Trigger: ATGAGCAGTATTATGGCTTCACACAGTTTGCACTAG...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCGATCCTCTGCTTCTaGACCTCAGCCTCCTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHSILCF*TSASSM Trigger: CATAGAGGAGGCTGAGGTTCAGAAGCAGAGGATCGA...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTAAGGAGCAACTACTTGTaGTTCTTGAAGGTGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLRSNYL*FLKVKP Trigger: TGGTTTCACCTTCAAGAAGCACAAGTAGTTGCTCCT...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTCAGAAGAATCTCTTGTaGCAGCCTTTTAAGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSAYNATLSTSDHSRCYLQKNLL*QPFKGH Trigger: GTGGCCCTTAAAAGGCTGGCACAAGAGATTCTTCTG...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGACGACATAGAAGAACAGCAATGTTTGTCTATAAGGCAGATGGTCAAACAGAAGAATCTCTTGTaGCAGCCTTTTAAGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QEDDIEEQQCLSIRQMVKQKNLL*QPFKGH Trigger: GTGGCCCTTAAAAGGCTGGCACAAGAGATTCTTCTG...TTTGACCATCTGCCTTATAGACAAACATTGCTGTTCTTCTATGTCGTCCTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCAGAAGAATCTCTTGTaGCAGCCTTTTAAGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFQKNLL*QPFKGH Trigger: GTGGCCCTTAAAAGGCTGGCACAAGAGATTCTTCTG...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GAAGTTTGCACTTCTGGTTGCTTGATGCCCACCTTATATAAAGAATATGCATCTTCCAGCTCCATCAGCTaGTTCAGTTTCTCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EVCTSGCLMPTLYKEYASSSSIS*FSFSLS Trigger: GGAGAGAGAGAAACTGAAGCAGCTGATGGAGCTGGA...AGATGCATATTCTTTATATAAGGTGGGCATCAAGCAACCAGAAGTGCAAACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGCGCTCAATATCAGCTTaGCTCTTGGCATATTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRRSISA*LLAYFK Trigger: CTTGAAATATGCCAAGAGCCAAGCTGATATTGAGCG...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCTGCTCGGAAGTAGCTaGATGCATATGCGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDLLGSS*MHMRRW Trigger: CCATCTCCGCATATGCATCCAGCTACTTCCGAGCAG...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATCTGCTCGGAAGTAGCTaGATGCATATGCGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHLLGSS*MHMRRW Trigger: CCATCTCCGCATATGCATCCAGCTACTTCCGAGCAG...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCAAGTTCACTTTGCAGTaGCAGGAGTCGTCATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFKFTLQ*QESSFR Trigger: CCTGAATGACGACTCCTGCCACTGCAAAGTGAACTT...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTAAGTTCACTTTGCAGTaGCAGGAGTCGTCATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSAYNATLSTSDHSRCYLKFTLQ*QESSFR Trigger: CCTGAATGACGACTCCTGCCACTGCAAAGTGAACTT...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATGTGCCTTCGATCTCGTaGGCATTAGTGCTCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHVPSIS*ALVLQY Trigger: GTACTGGAGCACTAATGCCCACGAGATCGAAGGCAC...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATAGCCTTTCGGCATaGGATTTGCTCTCCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDHSLSA*DLLSRR Trigger: GCGTCTGGAGAGCAAATCCCATGCCGAAAGGCTATG...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| 3UTR CAA 72 bp | CTGAAACATGCACATCAAATGGTGCAGCGATTGGCATaGTGTACTGGAGTAAGTCAGGAGTTCAGAAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LKHAHQMVQRLA*CTGVSQEFRKI Trigger: AATCTTTCTGAACTCCTGACTTACTCCAGTACACAATGCCAATCGCTGCACCATTTGATGTGCATGTTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GAAGTTTGCACTTCTGGTTGCTTGATGCCCACCTTATATAAAGAATATGCATCTCTGAGAAAAAGTGATTaGCATCCCGGGGAAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: EVCTSGCLMPTLYKEYASLRKSD*HPGETW Trigger: CCATGTTTCCCCGGGATGTCAATCACTTTTTCTCAG...AGATGCATATTCTTTATATAAGGTGGGCATCAAGCAACCAGAAGTGCAAACTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATGACCCTGAGAAAAAGTaGTTGACATCCCGGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHDPEKK*LTSRGN Trigger: GTTTCCCCGGGATGTCAATCACTTTTTCTCAGGGTC...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATGTGTGCCATGTCTTTTaGACATTTTTCCATGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHVCHVF*TFFHVL Trigger: GAGGACATGGAAAAATGTTCAAAAGACATGGCACAC...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCAGAAATCTCGTTTTCTaGAGAGCTAGGAGACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFRNLVF*RARRQQ Trigger: CTGCTGTCTCCTAGCTCTTCAGAAAACGAGATTTCT...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATCTAGTGCAAACTGTGTaGAGCCATAATACTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHLVQTV*SHNTAH Trigger: ATGAGCAGTATTATGGCTTCACACAGTTTGCACTAG...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATAGGAGCAACTACTTGTaGTTCTTGAAGGTGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHRSNYL*FLKVKP Trigger: TGGTTTCACCTTCAAGAAGCACAAGTAGTTGCTCCT...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATGGTGGAAATGAATTCTaGTTTGATAGACTGCTACGC | + |
|
Preference number: 4 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHGGNEF*FDRLLR Trigger: GCGTAGCAGTCTATCAAAGCAGAATTCATTTCCACC...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | AACATTCTTGGTACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGAGGTGGAAATGAATTCTaGTTTGATAGACTGCTACGC | + |
|
Preference number: 4 (lower is better) Translates to: NILGTSAPAELFCMSNRRGGNEF*FDRLLR Trigger: GCGTAGCAGTCTATCAAAGCAGAATTCATTTCCACC...TCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTACCAAGAATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATGATGCAGGACGTCCATaGTTTCTAAGAGCTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHDAGRP*FLRAGS Trigger: TGAGCCAGCTCTTAGAAAGCATGGACGTCCTGCATC...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTTAGGATTGGAGGAGTaGAGTCTCACAGGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHLGLEE*SLTGPE Trigger: TTCTGGCCCTGTGAGACTGCACTCCTCCAATCCTAA...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATTTAGGATTGGAGGAGTaGAGTCTCACAGGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDLGLEE*SLTGPE Trigger: TTCTGGCCCTGTGAGACTGCACTCCTCCAATCCTAA...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCCAGCTCCATCAGCTaGTTCAGTTTCTCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHSSSIS*FSFSLS Trigger: GGAGAGAGAGAAACTGAAGCAGCTGATGGAGCTGGA...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATTCCAGCTCCATCAGCTaGTTCAGTTTCTCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDSSSIS*FSFSLS Trigger: GGAGAGAGAGAAACTGAAGCAGCTGATGGAGCTGGA...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATTCCTCCTTTTGGATCTaGCTTCCCCACTACTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDSSFWI*LPHYSR Trigger: TCGAGAGTAGTGGGGAAGCCAGATCCAAAAGGAGGA...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCCTCCTTTTGGATCTaGCTTCCCCACTACTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHSSFWI*LPHYSR Trigger: TCGAGAGTAGTGGGGAAGCCAGATCCAAAAGGAGGA...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| 3UTR CAA 72 bp | AGAAGTAAAGGGAGGGAAGTTTGCACTTCTGGTTGCTaGATGCCCACCTTATATAAAGAATATGCATCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSKGREVCTSGC*MPTLYKEYASH Trigger: GTGAGATGCATATTCTTTATATAAGGTGGGCATCAAGCAACCAGAAGTGCAAACTTCCCTCCCTTTACTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATCTGAGAAAAAGTGATTaGCATCCCGGGGAAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHLRKSD*HPGETW Trigger: CCATGTTTCCCCGGGATGTCAATCACTTTTTCTCAG...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GAAGTTTGCACTTCTGGTTGCTTGATGCCCACCTTATATAAAGAATATGCATCTAGAAATCTCGTTTTCTaGAGAGCTAGGAGACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVCTSGCLMPTLYKEYASRNLVF*RARRQQ Trigger: CTGCTGTCTCCTAGCTCTTCAGAAAACGAGATTTCT...AGATGCATATTCTTTATATAAGGTGGGCATCAAGCAACCAGAAGTGCAAACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTATATGTCACTGACGTATaGATCATCATCAGAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: AASGSKCGQSYRKSPSLLYVTDV*IIIRNL Trigger: GAGATTTCTGATGATGATTCATACGTCAGTGACATA...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGTATCACTTATGTCACTaGCGTATGAATCATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRYHLCH*RMNHHQ Trigger: CTGATGATGATTCATACGTCAGTGACATAAGTGATA...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCGGTGGAAATGAATTCTaGTTTGATAGACTGCTACGC | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFGGNEF*FDRLLR Trigger: GCGTAGCAGTCTATCAAAGCAGAATTCATTTCCACC...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGCTCAATATCAGCTTaGCTCTTGGCATATTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFRSISA*LLAYFK Trigger: CTTGAAATATGCCAAGAGCCAAGCTGATATTGAGCG...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGTCGGGACAATTTCCATaGATTTACCCCAGAATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRSGQFP*IYPRIY Trigger: ATAAATTCTGGGGTAAATCCATGGAAATTGTCCCGA...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCACCATAAGACGGGATaGTCCAACTTGGAAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDHHKTG*SNLEKP Trigger: TGGCTTTTCCAAGTTGGACCATCCCGTCTTATGGTG...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATCACCATAAGACGGGATaGTCCAACTTGGAAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHHHKTG*SNLEKP Trigger: TGGCTTTTCCAAGTTGGACCATCCCGTCTTATGGTG...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATAGCAGAGATTCCGCATaGATTCTGCGTAAGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDSRDSA*ILRKRS Trigger: AGAACGCTTACGCAGAATCCATGCGGAATCTCTGCT...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATGTCAAAGAGTTCTTCTaGCTTCACCTTCAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHVKEFF*LHLQVV Trigger: TACCACCTGAAGGTGAAGTCAGAAGAACTCTTTGAC...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATGTCAAAGAGTTCTTCTaGCTTCACCTTCAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDVKEFF*LHLQVV Trigger: TACCACCTGAAGGTGAAGTCAGAAGAACTCTTTGAC...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATAGAAATCTCGTTTTCTaGAGAGCTAGGAGACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHRNLVF*RARRQQ Trigger: CTGCTGTCTCCTAGCTCTTCAGAAAACGAGATTTCT...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATTATGTCACTGACGTATaGATCATCATCAGAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHYVTDV*IIIRNL Trigger: GAGATTTCTGATGATGATTCATACGTCAGTGACATA...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | AACATTCTTGGTACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGATATCACTTATGTCACTaGCGTATGAATCATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: NILGTSAPAELFCMSNRRYHLCH*RMNHHQ Trigger: CTGATGATGATTCATACGTCAGTGACATAAGTGATA...TCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTACCAAGAATGTT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCTATCAGCTTGGCTCTTaGCATATTTCAAGATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFYQLGS*HISRFP Trigger: AGGGAATCTTGAAATATGCCAAGAGCCAAGCTGATA...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CCA 90 bp | CAGCAATGTTTGTCTATAAGGCAGATGGTCAAACTGGCTATACAAGGTCAAAAGTATCAGCTTGGCTCTTaGCATATTTCAAGATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QQCLSIRQMVKLAIQGQKYQLGS*HISRFP Trigger: AGGGAATCTTGAAATATGCCAAGAGCCAAGCTGATA...CTTTTGACCTTGTATAGCCAGTTTGACCATCTGCCTTATAGACAAACATTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATGTGTGCCATGTCTTTTaGACATTTTTCCATGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHVCHVF*TFFHVL Trigger: GAGGACATGGAAAAATGTTCAAAAGACATGGCACAC...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR TCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCTATCACTTATGTCACTaGCGTATGAATCATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFYHLCH*RMNHHQ Trigger: CTGATGATGATTCATACGTCAGTGACATAAGTGATA...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTTGTCTAAATCATTACTaGGGTTGTCTAAGGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSAYNATLSTSDHSRCYLCLNHY*GCLRTD Trigger: ATCTGTCCTTAGACAACCTCAGTAATGATTTAGACA...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR GCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATGGTGGAAATGAATTCTaGTTTGATAGACTGCTACGC | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDGGNEF*FDRLLR Trigger: GCGTAGCAGTCTATCAAAGCAGAATTCATTTCCACC...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATAAGAAAATGACAAATTaGTTCCGGGTGGAAATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHKKMTN*FRVEMN Trigger: ATTCATTTCCACCCGGAAGCAATTTGTCATTTTCTT...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATCGCTCAATATCAGCTTaGCTCTTGGCATATTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHRSISA*LLAYFK Trigger: CTTGAAATATGCCAAGAGCCAAGCTGATATTGAGCG...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCTCGGGACAATTTCCATaGATTTACCCCAGAATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFSGQFP*IYPRIY Trigger: ATAAATTCTGGGGTAAATCCATGGAAATTGTCCCGA...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR GCA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCAAGAAAATGACAAATTaGTTCCGGGTGGAAATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFKKMTN*FRVEMN Trigger: ATTCATTTCCACCCGGAAGCAATTTGTCATTTTCTT...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR GCA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTAAGAAAATGACAAATTaGTTCCGGGTGGAAATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSAYNATLSTSDHSRCYLKKMTN*FRVEMN Trigger: ATTCATTTCCACCCGGAAGCAATTTGTCATTTTCTT...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR GCA 90 bp | CAGCAATGTTTGTCTATAAGGCAGATGGTCAAACTGGCTATACAAGGTCAAAAGAAGAAAATGACAAATTaGTTCCGGGTGGAAATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QQCLSIRQMVKLAIQGQKKKMTN*FRVEMN Trigger: ATTCATTTCCACCCGGAAGCAATTTGTCATTTTCTT...CTTTTGACCTTGTATAGCCAGTTTGACCATCTGCCTTATAGACAAACATTGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATTATCAGCTTGGCTCTTaGCATATTTCAAGATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDYQLGS*HISRFP Trigger: AGGGAATCTTGAAATATGCCAAGAGCCAAGCTGATA...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR TCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTATGTCACTGACGTATaGATCATCATCAGAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHYVTDV*IIIRNL Trigger: GAGATTTCTGATGATGATTCATACGTCAGTGACATA...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR TCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATTGTCTAAATCATTACTaGGGTTGTCTAAGGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDCLNHY*GCLRTD Trigger: ATCTGTCCTTAGACAACCTCAGTAATGATTTAGACA...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR TCA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTGTCTAAATCATTACTaGGGTTGTCTAAGGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EENIYFSAYNATLSTSDHCLNHY*GCLRTD Trigger: ATCTGTCCTTAGACAACCTCAGTAATGATTTAGACA...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR CCA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATTCGGGACAATTTCCATaGATTTACCCCAGAATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TEENIYFSAYNATLSTSDSGQFP*IYPRIY Trigger: ATAAATTCTGGGGTAAATCCATGGAAATTGTCCCGA...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS GCA 90 bp | GAGCTGGTGCACCAGGGCTCGGCCCTCATCCCTGGAGTTTTCCTCTaGCAGGTTGTCCCCCGGCTTGGGAACAGCGGGCGGGTCGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ELVHQGSALIPGVFL*QVVPRLGNSGRVEE Trigger: CTCCTCGACCCGCCCGCTGTTCCCAAGCCGGGGGACAACCTGGCAGAGGAAAACTCCAGGGATGAGGGCCGAGCCCTGGTGCACCAGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 ENSMUST00000203907.3 |
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| CDS TCA 90 bp | GAGCTGGTGCACCAGGGCTCGGCCCTCATCCCTGGAGTTTTCGGATaGCAGAGCGTGCTTCAGCCCGACGACCTGAGCGGAGGGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ELVHQGSALIPGVFG*QSVLQPDDLSGGGG Trigger: CCCTCCCCCTCCGCTCAGGTCGTCGGGCTGAAGCACGCTCTGTCATCCGAAAACTCCAGGGATGAGGGCCGAGCCCTGGTGCACCAGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071728.11 ENSMUST00000114466.8 |
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| CDS CCA 90 bp | GGCCCTCATCCCTGGAGTTTTCCTCTGCCAGGTTGTCCCCCGGCTTaGGAACAGCGGGCGGGTCGAGGAGCAGAGATTCCGCATGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: GPHPWSFPLPGCPPA*EQRAGRGAEIPHGF Trigger: GAATCCATGCGGAATCTCTGCTCCTCGACCCGCCCGCTGTTCCCAAGCCGGGGGACAACCTGGCAGAGGAAAACTCCAGGGATGAGGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 ENSMUST00000203907.3 |
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| CDS CCA 90 bp | TGCTCTCATTGGAGAGCTGGTGCACCAGGGCTCGGCCCTCATCCCTaGAGTTTTCCTCTGCCAGGTTGTCCCCCGGCTTGGGAACAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CSHWRAGAPGLGPHP*SFPLPGCPPAWEQR Trigger: CCGCTGTTCCCAAGCCGGGGGACAACCTGGCAGAGGAAAACTCCAGGGATGAGGGCCGAGCCCTGGTGCACCAGCTCTCCAATGAGAGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 ENSMUST00000203907.3 |
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| CDS CCA 90 bp | TGCTCTCATTGGAGAGCTGGTGCACCAGGGCTCGGCCCTCATCCCTaGAGTTTTCGGATGACAGAGCGTGCTTCAGCCCGACGACCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSHWRAGAPGLGPHP*SFRMTERASARRPE Trigger: CTCAGGTCGTCGGGCTGAAGCACGCTCTGTCATCCGAAAACTCCAGGGATGAGGGCCGAGCCCTGGTGCACCAGCTCTCCAATGAGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071728.11 ENSMUST00000114466.8 |
||
| CDS GCA 90 bp | GAAAGGGAGTCGGTGATAGACAGCCTGCTCTCATTGGAGAGCTGGTaGACCAGGGCTCGGCCCTCATCCCTGGAGTTTTCCTCTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ERESVIDSLLSLESW*TRARPSSLEFSSAR Trigger: CCTGGCAGAGGAAAACTCCAGGGATGAGGGCCGAGCCCTGGTGCACCAGCTCTCCAATGAGAGCAGGCTGTCTATCACCGACTCCCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 ENSMUST00000203907.3 |
||
| CDS GCA 90 bp | CTTACCCAAGCATCGTCACTGGATTTCCTGAAAAACCGGGGCTGGTaGTCCACACCGTTCTCCTCCAAGACCCTCCGCCGCTCTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LTQASSLDFLKNRGW*STPFSSKTLRRSLC Trigger: GCAGAGAGAGCGGCGGAGGGTCTTGGAGGAGAACGGTGTGGAGCACCAGCCCCGGTTTTTCAGGAAATCCAGTGACGATGCTTGGGTAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS GCA 90 bp | GCTCCACCCTGGATGGCGTTGATGGCTGGCGCCGAGTATGTCCGATaGAGGACGTCCATGCTTTCTAAGAGCTGGCTCATTTCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: APPWMALMAGAEYVR*RTSMLSKSWLISSR Trigger: CCTGCTGGAAATGAGCCAGCTCTTAGAAAGCATGGACGTCCTGCATCGGACATACTCGGCGCCAGCCATCAACGCCATCCAGGGTGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114466.8 |
||
| CDS GCA 90 bp | GAAAGGGAGTCGGTGATAGACAGCCTGCTCTCATTGGAGAGCTGGTaGACCAGGGCTCGGCCCTCATCCCTGGAGTTTTCGGATGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ERESVIDSLLSLESW*TRARPSSLEFSDDR Trigger: TCTGTCATCCGAAAACTCCAGGGATGAGGGCCGAGCCCTGGTGCACCAGCTCTCCAATGAGAGCAGGCTGTCTATCACCGACTCCCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071728.11 ENSMUST00000114466.8 |
||
| CDS CCA 90 bp | TTGCTTACCCAAGCATCGTCACTGGATTTCCTGAAAAACCGGGGCTaGTGCTCCACACCGTTCTCCTCCAAGACCCTCCGCCGCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLTQASSLDFLKNRG*CSTPFSSKTLRRSL Trigger: GAGAGAGCGGCGGAGGGTCTTGGAGGAGAACGGTGTGGAGCACCAGCCCCGGTTTTTCAGGAAATCCAGTGACGATGCTTGGGTAAGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS TCA 90 bp | CCAGGTAGGTCCCATTGCTTACCCAAGCATCGTCACTGGATTTCCTaGAAAACCGGGGCTGGTGCTCCACACCGTTCTCCTCCAAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: PGRSHCLPKHRHWIS*KTGAGAPHRSPPRP Trigger: GGGTCTTGGAGGAGAACGGTGTGGAGCACCAGCCCCGGTTTTTCAGGAAATCCAGTGACGATGCTTGGGTAAGCAATGGGACCTACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS GCA 90 bp | TTAGGGACCTGGATGGCGTTGATGGCTGGCGCCGAGTATGTCCGATaGAGGACGTCCATGCTTTCTAAGAGCTGGCTCATTTCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGTWMALMAGAEYVR*RTSMLSKSWLISSR Trigger: CCTGCTGGAAATGAGCCAGCTCTTAGAAAGCATGGACGTCCTGCATCGGACATACTCGGCGCCAGCCATCAACGCCATCCAGGTCCCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071728.11 ENSMUST00000114468.9 |
||
| CDS GCA 90 bp | AAGGACCGGGTTAAACGGCTTGCTGCCTGCTCGGAAGTAGCTGGATaGATATGCGGAGATGGCGAAGGCTGCTACGTACACCATCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KDRVKRLAACSEVAG*ICGDGEGCYVHHPL Trigger: GAGAGGATGGTGTACGTAGCAGCCTTCGCCATCTCCGCATATGCATCCAGCTACTTCCGAGCAGGCAGCAAGCCGTTTAACCCGGTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS GCA 90 bp | GCATTCGTACGTTTCTCCAAGGACCGGGTTAAACGGCTTGCTGCCTaGTCGGAAGTAGCTGGATGCATATGCGGAGATGGCGAAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AFVRFSKDRVKRLAA*SEVAGCICGDGEGC Trigger: GCAGCCTTCGCCATCTCCGCATATGCATCCAGCTACTTCCGAGCAGGCAGCAAGCCGTTTAACCCGGTCCTTGGAGAAACGTACGAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS CCA 90 bp | ACTGCTCATAGCCTTTCGGCATGGGATTTGCTCTCCAGACGCATGTaGAAGAGGAGGCGCCGCCACAGTAGATGCTCTCGTGCCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TAHSLSAWDLLSRRM*KRRRRHSRCSRAIS Trigger: GGAAATGGCACGAGAGCATCTACTGTGGCGGCGCCTCCTCTTCCACATGCGTCTGGAGAGCAAATCCCATGCCGAAAGGCTATGAGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS CCA 90 bp | CCCGGCTTGGGAACAGCGGGCGGGTCGAGGAGCAGAGATTCCGCATaGATTCTGCGTAAGCGTTCTTTAAGATCTGTGTTTTGTGCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGLGTAGGSRSRDSA*ILRKRSLRSVFCAR Trigger: CCTAGCACAAAACACAGATCTTAAAGAACGCTTACGCAGAATCCATGCGGAATCTCTGCTCCTCGACCCGCCCGCTGTTCCCAAGCCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 ENSMUST00000203907.3 |
||
| CDS-3UTR CAA 90 bp | TATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTAGAGAGTACCAAAGCCGTGGGACCTGGATGGCGTaGATGGCTGGCGCCGAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: YTRSKGRCSVRGREYQSRGTWMA*MAGAEY Trigger: ATACTCGGCGCCAGCCATCAACGCCATCCAGGTCCC...ACGGCTTTGGTACTCTCTACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | TATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTAGAGAGTACCAAAGCCGTCCACCCTGGATGGCGTaGATGGCTGGCGCCGAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: YTRSKGRCSVRGREYQSRPPWMA*MAGAEY Trigger: ATACTCGGCGCCAGCCATCAACGCCATCCAGGGTGG...ACGGCTTTGGTACTCTCTACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090019.10 |
||
| CDS TCA 90 bp | TCCCGGGGAAACATGGCGATCTCATTCTGCCGGTACATTCTGTGGTaGCGGAGCTTGGACACCCACTCGTCAAAGAGTTCTTCTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRGNMAISFCRYILW*RSLDTHSSKSSSDF Trigger: GAAGTCAGAAGAACTCTTTGACGAGTGGGTGTCCAAGCTCCGTCACCACAGAATGTACCGGCAGAATGAGATCGCCATGTTTCCCCGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS GCA 90 bp | TTCTCTTCTCCAAAGTCCAGCGTCGACAAGTTAGGATTGGAGGAGTaGAGTCTCACAGGGCCAGAAAAAGGCTTAGGGACCTGGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FSSPKSSVDKLGLEE*SLTGPEKGLGTWMA Trigger: CGCCATCCAGGTCCCTAAGCCTTTTTCTGGCCCTGTGAGACTGCACTCCTCCAATCCTAACTTGTCGACGCTGGACTTTGGAGAAGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071728.11 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | TACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGAGCTGTCTGAGGACCGGCATGGCCACCTaGGACAGGTCCTTCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: YFSTGRIVLYEQSKSCLRTGMAT*DRSFPM Trigger: CATTGGGAAGGACCTGTCCAAGGTGGCCATGCCGGT...CCTCAGACAGCTCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS GCA 90 bp | TTCTCTTCTCCAAAGTCCAGCGTCGACAAGTTAGGATTGGAGGAGTaGAGTCTCACAGGGCCAGAAAAAGGCTTAGGGACCTGCAGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: FSSPKSSVDKLGLEE*SLTGPEKGLGTCSV Trigger: AACGCTGCAGGTCCCTAAGCCTTTTTCTGGCCCTGTGAGACTGCACTCCTCCAATCCTAACTTGTCGACGCTGGACTTTGGAGAAGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114466.8 |
||
| CDS GCA 90 bp | TTCTCTTCTCCAAAGTCCAGCGTCGACAAGTTAGGATTGGAGGAGTaGAGTCTCACAGGGCCAGAAAAAGGCTTAGGGACCTTCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSSPKSSVDKLGLEE*SLTGPEKGLGTFRW Trigger: CCACCTGAAGGTCCCTAAGCCTTTTTCTGGCCCTGTGAGACTGCACTCCTCCAATCCTAACTTGTCGACGCTGGACTTTGGAGAAGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203907.3 |
||
| CDS CCA 90 bp | TGCACAGCCTTCCCACTGCGGTCGAACACCGTGCCTTCGATCTCGTaGGCATTAGTGCTCCAGTACTTAGCCTTTATGAAGTTCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CTAFPLRSNTVPSIS*ALVLQYLAFMKFTL Trigger: CAAAGTGAACTTCATAAAGGCTAAGTACTGGAGCACTAATGCCCACGAGATCGAAGGCACGGTGTTCGACCGCAGTGGGAAGGCTGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | AGCTACCAATTAACCCTGGGTAGCTATGCATGGGTGAGTATCCCTGGGTGTTATGTCCTGCCGGCTTCCTaGCTTGGAGGAGCAACTACT | + |
|
Preference number: 5 (lower is better) Translates to: SYQLTLGSYAWVSIPGCYVLPAS*LGGATT Trigger: AGTAGTTGCTCCTCCAAGCAAGGAAGCCGGCAGGAC...ATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTAGGGACCTGGATGGCGTaGATGGCTGGCGCCGAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: AASGSKCGQSYRKSPSLLGTWMA*MAGAEY Trigger: ATACTCGGCGCCAGCCATCAACGCCATCCAGGTCCC...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071728.11 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GTGCACAGTAGGCCTACATTAAGAAGCAAAGTAGCCCTCACCTCTATTTTTGGCGACAGCCTGCTCTCATaGGAGAGCTGGTGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VHSRPTLRSKVALTSIFGDSLLS*ESWCTR Trigger: CCTGGTGCACCAGCTCTCCAATGAGAGCAGGCTGTC...GCCAAAAATAGAGGTGAGGGCTACTTTGCTTCTTAATGTAGGCCTACTGTGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114468.9 |
||
| CDS CCA 90 bp | ACATGGCGATCTCATTCTGCCGGTACATTCTGTGGTGACGGAGCTTaGACACCCACTCGTCAAAGAGTTCTTCTGACTTCACCTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TWRSHSAGTFCGDGA*TPTRQRVLLTSPSG Trigger: ACCTGAAGGTGAAGTCAGAAGAACTCTTTGACGAGTGGGTGTCCAAGCTCCGTCACCACAGAATGTACCGGCAGAATGAGATCGCCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | TATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTAGAGAGTACCAAAGCCGTAAGCTGGTCCTCCTTTaGGATCTGGCTTCCCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: YTRSKGRCSVRGREYQSRKLVLL*DLASPL Trigger: TAGTGGGGAAGCCAGATCCAAAAGGAGGACCAGCTT...ACGGCTTTGGTACTCTCTACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATCCACCCTGGATGGCGTaGATGGCTGGCGCCGAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHPPWMA*MAGAEY Trigger: ATACTCGGCGCCAGCCATCAACGCCATCCAGGGTGG...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114466.8 |
||
| CDS GCA 90 bp | GACTTCTTCACAGACATCACAGAGAGCCCCACGTCAATGCAGCCATaGAACTTCTCCCGCTCAATATCAGCTTGGCTCTTGGCATATTTC | + |
|
Preference number: 5 (lower is better) Translates to: DFFTDITESPTSMQP*NFSRSISAWLLAYF Trigger: GAAATATGCCAAGAGCCAAGCTGATATTGAGCGGGAGAAGTTGCATGGCTGCATTGACGTGGGGCTCTCTGTGATGTCTGTGAAGAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 ENSMUST00000146341.4 |
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| CDS-3UTR CAA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGGTCCTGCCGGCTTCCTaGCTTGGAGGAGCAACTACT | + |
|
Preference number: 5 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRVLPAS*LGGATT Trigger: AGTAGTTGCTCCTCCAAGCAAGGAAGCCGGCAGGAC...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATGACAGCCTGCTCTCATaGGAGAGCTGGTGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHDSLLS*ESWCTR Trigger: CCTGGTGCACCAGCTCTCCAATGAGAGCAGGCTGTC...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATACCGGCATGGCCACCTaGGACAGGTCCTTCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHTGMAT*DRSFPM Trigger: CATTGGGAAGGACCTGTCCAAGGTGGCCATGCCGGT...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS TCA 90 bp | GCTCCATCAGCTGCTTCAGTTTCTCTCTCTCCACCGATATGCTATTaGAAGCCGACCTTAAAGCGAAGTAAACTTTGTGGGCGACATGGC | + |
|
Preference number: 5 (lower is better) Translates to: APSAASVSLSPPICY*KPTLKRSKLCGRHG Trigger: GCCATGTCGCCCACAAAGTTTACTTCGCTTTAAGGTCGGCTTTCAATAGCATATCGGTGGAGAGAGAGAAACTGAAGCAGCTGATGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 ENSMUST00000203907.3 |
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| CDS-3UTR CAA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTGACAGCCTGCTCTCATaGGAGAGCTGGTGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSAYNATLSTSDHSRCYLDSLLS*ESWCTR Trigger: CCTGGTGCACCAGCTCTCCAATGAGAGCAGGCTGTC...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS-3UTR CAA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTAAGGTCCTTCCCAATGTaGTTGCGCAGGATGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AASGSKCGQSYRKSPSLLRSFPM*LRRMLH Trigger: GTGGAGCATCCTGCGCAACAACATTGGGAAGGACCT...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS GCA 90 bp | ATGACAAATTGCTTCCGGGTGGAAATGAATTCTGCTTTGATAGACTaGTACGCTTCCTACTGGAAACTGACTCGAACACTCCTGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MTNCFRVEMNSALID*YASYWKLTRTLLGQ Trigger: CTGCCCCAGGAGTGTTCGAGTCAGTTTCCAGTAGGAAGCGTAGCAGTCTATCAAAGCAGAATTCATTTCCACCCGGAAGCAATTTGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCGTCCTGCCGGCTTCCTaGCTTGGAGGAGCAACTACT | + |
|
Preference number: 5 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFVLPAS*LGGATT Trigger: AGTAGTTGCTCCTCCAAGCAAGGAAGCCGGCAGGAC...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTGTCCTGCCGGCTTCCTaGCTTGGAGGAGCAACTACT | + |
|
Preference number: 5 (lower is better) Translates to: FSAYNATLSTSDHSRCYLVLPAS*LGGATT Trigger: AGTAGTTGCTCCTCCAAGCAAGGAAGCCGGCAGGAC...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTAAAGCTGGTCCTCCTTTaGGATCTGGCTTCCCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: AASGSKCGQSYRKSPSLLKLVLL*DLASPL Trigger: TAGTGGGGAAGCCAGATCCAAAAGGAGGACCAGCTT...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATAGGTCCTTCCCAATGTaGTTGCGCAGGATGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHRSFPM*LRRMLH Trigger: GTGGAGCATCCTGCGCAACAACATTGGGAAGGACCT...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTTTTTCCTCTGCCAGGTaGTCCCCCGGCTTGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: FSAYNATLSTSDHSRCYLFSSAR*SPGLGT Trigger: TGTTCCCAAGCCGGGGGACAACCTGGCAGAGGAAAA...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS GCA 90 bp | GCCAGAAAGGAACTCGAGTGTCGCCACCACAAGAAAATGACAAATTaGTTCCGGGTGGAAATGAATTCTGCTTTGATAGACTGCTACGCT | + |
|
Preference number: 5 (lower is better) Translates to: ARKELECRHHKKMTN*FRVEMNSALIDCYA Trigger: AGCGTAGCAGTCTATCAAAGCAGAATTCATTTCCACCCGGAAGCAATTTGTCATTTTCTTGTGGTGGCGACACTCGAGTTCCTTTCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | AGCTACCAATTAACCCTGGGTAGCTATGCATGGGTGAGTATCCCTGGGTGTTATCCGCTCAATATCAGCTaGGCTCTTGGCATATTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SYQLTLGSYAWVSIPGCYPLNIS*ALGIFQ Trigger: TTGAAATATGCCAAGAGCCAAGCTGATATTGAGCGG...ATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATAAGCTGGTCCTCCTTTaGGATCTGGCTTCCCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHKLVLL*DLASPL Trigger: TAGTGGGGAAGCCAGATCCAAAAGGAGGACCAGCTT...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATACCGGCATGGCCACCTaGGACAGGTCCTTCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: TEENIYFSAYNATLSTSDTGMAT*DRSFPM Trigger: CATTGGGAAGGACCTGTCCAAGGTGGCCATGCCGGT...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTAACGGGATGGTCCAACTaGGAAAAGCCAAGGTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AASGSKCGQSYRKSPSLLTGWSN*EKPRSF Trigger: GAAAGACCTTGGCTTTTCCAAGTTGGACCATCCCGT...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGGTTCCTTTAGCATCTTaGCCAATAGCTCTGGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRVPLAS*PIALDR Trigger: GCGGTCCAGAGCTATTGGCAAAGATGCTAAAGGAAC...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114466.8 |
||
| CDS-3UTR CAA 90 bp | TACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGAGCTGTCTGAGGATATCAGCTTGGCTCTaGGCATATTTCAAGATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: YFSTGRIVLYEQSKSCLRISAWL*AYFKIP Trigger: GGGAATCTTGAAATATGCCAAGAGCCAAGCTGATAT...CCTCAGACAGCTCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | TACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGAGCTGTCTGAGGGAAATGAATTCTGCTTaGATAGACTGCTACGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YFSTGRIVLYEQSKSCLREMNSA*IDCYAS Trigger: GGAAGCGTAGCAGTCTATCAAAGCAGAATTCATTTC...CCTCAGACAGCTCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | TATACAAGGTCAAAAGGGCGGTGCTCGGTAAGAGGTAGAGAGTACCAAAGCCGTCAAGAAAATGACAAATaGCTTCCGGGTGGAAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: YTRSKGRCSVRGREYQSRQENDK*LPGGNE Trigger: TTCATTTCCACCCGGAAGCAATTTGTCATTTTCTTG...ACGGCTTTGGTACTCTCTACCTCTTACCGAGCACCGCCCTTTTGACCTTGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTAAAAAACTGGAAACCCTaGTCCTGTCGGATGCATTCG | + |
|
Preference number: 5 (lower is better) Translates to: AASGSKCGQSYRKSPSLLKNWKP*SCRMHS Trigger: CGAATGCATCCGACAGGACAAGGGTTTCCAGTTTTT...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | AACATTCTTGGTACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGAGTTCCTTTAGCATCTTaGCCAATAGCTCTGGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: NILGTSAPAELFCMSNRRVPLAS*PIALDR Trigger: GCGGTCCAGAGCTATTGGCAAAGATGCTAAAGGAAC...TCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTACCAAGAATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090019.10 |
||
| CDS GCA 90 bp | CCACCACAAGAAAATGACAAATTGCTTCCGGGTGGAAATGAATTCTaGTTTGATAGACTGCTACGCTTCCTACTGGAAACTGACTCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PPQENDKLLPGGNEF*FDRLLRFLLETDSN Trigger: GTTCGAGTCAGTTTCCAGTAGGAAGCGTAGCAGTCTATCAAAGCAGAATTCATTTCCACCCGGAAGCAATTTGTCATTTTCTTGTGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | AGCTACCAATTAACCCTGGGTAGCTATGCATGGGTGAGTATCCCTGGGTGTTATCAAGAAAATGACAAATaGCTTCCGGGTGGAAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: SYQLTLGSYAWVSIPGCYQENDK*LPGGNE Trigger: TTCATTTCCACCCGGAAGCAATTTGTCATTTTCTTG...ATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATAGGTCCTTCCCAATGTaGTTGCGCAGGATGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TEENIYFSAYNATLSTSDRSFPM*LRRMLH Trigger: GTGGAGCATCCTGCGCAACAACATTGGGAAGGACCT...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATAAAAACTGGAAACCCTaGTCCTGTCGGATGCATTCG | + |
|
Preference number: 5 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHKNWKP*SCRMHS Trigger: CGAATGCATCCGACAGGACAAGGGTTTCCAGTTTTT...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGTTTATGAAGTTCACTTaGCAGTGGCAGGAGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRFMKFT*QWQESS Trigger: TGACGACTCCTGCCACTGCAAAGTGAACTTCATAAA...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCACGGGATGGTCCAACTaGGAAAAGCCAAGGTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFTGWSN*EKPRSF Trigger: GAAAGACCTTGGCTTTTCCAAGTTGGACCATCCCGT...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATAAGCTGGTCCTCCTTTaGGATCTGGCTTCCCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: TEENIYFSAYNATLSTSDKLVLL*DLASPL Trigger: TAGTGGGGAAGCCAGATCCAAAAGGAGGACCAGCTT...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTAAAAACTGGAAACCCTaGTCCTGTCGGATGCATTCG | + |
|
Preference number: 5 (lower is better) Translates to: FSAYNATLSTSDHSRCYLKNWKP*SCRMHS Trigger: CGAATGCATCCGACAGGACAAGGGTTTCCAGTTTTT...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | CAGCAATGTTTGTCTATAAGGCAGATGGTCAAACTGGCTATACAAGGTCAAAAGAAAAACTGGAAACCCTaGTCCTGTCGGATGCATTCG | + |
|
Preference number: 5 (lower is better) Translates to: QQCLSIRQMVKLAIQGQKKNWKP*SCRMHS Trigger: CGAATGCATCCGACAGGACAAGGGTTTCCAGTTTTT...CTTTTGACCTTGTATAGCCAGTTTGACCATCTGCCTTATAGACAAACATTGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | AGCTACCAATTAACCCTGGGTAGCTATGCATGGGTGAGTATCCCTGGGTGTTATGTGGTAATAAAGACCTaGACAAAGGATCCATTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SYQLTLGSYAWVSIPGCYVVIKT*TKDPFH Trigger: ATGAAATGGATCCTTTGTCAAGGTCTTTATTACCAC...ATAACACCCAGGGATACTCACCCATGCATAGCTACCCAGGGTTAATTGGTAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS TCA 90 bp | ACCTTGACAAAGGATCCATTTCATTTAACTCTAGTGCAAACTGTGTaGAGCCATAATACTGCTCATAGCCTTTCGGCATGGGATTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLTKDPFHLTLVQTV*SHNTAHSLSAWDLL Trigger: GAGCAAATCCCATGCCGAAAGGCTATGAGCAGTATTATGGCTTCACACAGTTTGCACTAGAGTTAAATGAAATGGATCCTTTGTCAAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTTGGAGGAGCAACTACTaGTGCTTCTTGAAGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FSAYNATLSTSDHSRCYLWRSNY*CFLKVK Trigger: TTTCACCTTCAAGAAGCACAAGTAGTTGCTCCTCCA...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATATATCAGCTTGGCTCTaGGCATATTTCAAGATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHISAWL*AYFKIP Trigger: GGGAATCTTGAAATATGCCAAGAGCCAAGCTGATAT...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | CAGCAATGTTTGTCTATAAGGCAGATGGTCAAACTGGCTATACAAGGTCAAAAGCCGCTCAATATCAGCTaGGCTCTTGGCATATTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QQCLSIRQMVKLAIQGQKPLNIS*ALGIFQ Trigger: TTGAAATATGCCAAGAGCCAAGCTGATATTGAGCGG...CTTTTGACCTTGTATAGCCAGTTTGACCATCTGCCTTATAGACAAACATTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATGAAATGAATTCTGCTTaGATAGACTGCTACGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHEMNSA*IDCYAS Trigger: GGAAGCGTAGCAGTCTATCAAAGCAGAATTCATTTC...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGCAAGAAAATGACAAATaGCTTCCGGGTGGAAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRQENDK*LPGGNE Trigger: TTCATTTCCACCCGGAAGCAATTTGTCATTTTCTTG...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GCTGCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTATTTCCATCTCACATCTaGCCAGAAAACAAAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AASGSKCGQSYRKSPSLLFPSHI*PENKVS Trigger: GGAAACTTTGTTTTCTGGCAAGATGTGAGATGGAAA...TAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | CAAGAGGACGACATAGAAGAACAGCAATGTTTGTCTATAAGGCAGATGGTCAAATTTATGAAGTTCACTTaGCAGTGGCAGGAGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QEDDIEEQQCLSIRQMVKFMKFT*QWQESS Trigger: TGACGACTCCTGCCACTGCAAAGTGAACTTCATAAA...TTTGACCATCTGCCTTATAGACAAACATTGCTGTTCTTCTATGTCGTCCTCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATACGGGATGGTCCAACTaGGAAAAGCCAAGGTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TEENIYFSAYNATLSTSDTGWSN*EKPRSF Trigger: GAAAGACCTTGGCTTTTCCAAGTTGGACCATCCCGT...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGAACTACTTGTGCTTCTaGAAGGTGAAACCAACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRNYLCF*KVKPTF Trigger: AAAAGTTGGTTTCACCTTCAAGAAGCACAAGTAGTT...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | AGTGATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCATATCAGCTTGGCTCTaGGCATATTTCAAGATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SDHSRCYLLNIQTAVRCFISAWL*AYFKIP Trigger: GGGAATCTTGAAATATGCCAAGAGCCAAGCTGATAT...GAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | CAAGAGGACGACATAGAAGAACAGCAATGTTTGTCTATAAGGCAGATGGTCAAAGAAATGAATTCTGCTTaGATAGACTGCTACGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QEDDIEEQQCLSIRQMVKEMNSA*IDCYAS Trigger: GGAAGCGTAGCAGTCTATCAAAGCAGAATTCATTTC...TTTGACCATCTGCCTTATAGACAAACATTGCTGTTCTTCTATGTCGTCCTCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | AACATTCTTGGTACTTCAGCACCGGCAGAATTGTTCTGTATGAGCAATCGAAGATTTCCATCTCACATCTaGCCAGAAAACAAAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NILGTSAPAELFCMSNRRFPSHI*PENKVS Trigger: GGAAACTTTGTTTTCTGGCAAGATGTGAGATGGAAA...TCTTCGATTGCTCATACAGAACAATTCTGCCGGTGCTGAAGTACCAAGAATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATTTTCCATCTCACATCTaGCCAGAAAACAAAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHFPSHI*PENKVS Trigger: GGAAACTTTGTTTTCTGGCAAGATGTGAGATGGAAA...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GATCATTCTAGATGCTATCTTTTAAACATACAGACAGCTGTGCGCTGCTTCCGGGTGGTAATAAAGACCTaGACAAAGGATCCATTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DHSRCYLLNIQTAVRCFRVVIKT*TKDPFH Trigger: ATGAAATGGATCCTTTGTCAAGGTCTTTATTACCAC...CCGGAAGCAGCGCACAGCTGTCTGTATGTTTAAAAGATAGCATCTAGAATGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATCCGCTCAATATCAGCTaGGCTCTTGGCATATTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: EENIYFSAYNATLSTSDHPLNIS*ALGIFQ Trigger: TTGAAATATGCCAAGAGCCAAGCTGATATTGAGCGG...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTTTTCCATCTCACATCTaGCCAGAAAACAAAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSAYNATLSTSDHSRCYLFPSHI*PENKVS Trigger: GGAAACTTTGTTTTCTGGCAAGATGTGAGATGGAAA...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTTTATGAAGTTCACTTaGCAGTGGCAGGAGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EENIYFSAYNATLSTSDHFMKFT*QWQESS Trigger: TGACGACTCCTGCCACTGCAAAGTGAACTTCATAAA...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCGGAAGCAAATGTGGGCAAAGTTACAGGAAATCTCCTTCTCTTTTACATGTGGTAATAAAGACCTaGACAAAGGATCCATTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ASGSKCGQSYRKSPSLLHVVIKT*TKDPFH Trigger: ATGAAATGGATCCTTTGTCAAGGTCTTTATTACCAC...ATGTAAAAGAGAAGGAGATTTCCTGTAACTTTGCCCACATTTGCTTCCGGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | CAGCAATGTTTGTCTATAAGGCAGATGGTCAAACTGGCTATACAAGGTCAAAAGAACTACTTGTGCTTCTaGAAGGTGAAACCAACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QQCLSIRQMVKLAIQGQKNYLCF*KVKPTF Trigger: AAAAGTTGGTTTCACCTTCAAGAAGCACAAGTAGTT...CTTTTGACCTTGTATAGCCAGTTTGACCATCTGCCTTATAGACAAACATTGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATGAAATGAATTCTGCTTaGATAGACTGCTACGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EENIYFSAYNATLSTSDHEMNSA*IDCYAS Trigger: GGAAGCGTAGCAGTCTATCAAAGCAGAATTCATTTC...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATTCTAGATGCTATCTTGTGGTAATAAAGACCTaGACAAAGGATCCATTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FSAYNATLSTSDHSRCYLVVIKT*TKDPFH Trigger: ATGAAATGGATCCTTTGTCAAGGTCTTTATTACCAC...AAGATAGCATCTAGAATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCAAGAAAATGACAAATaGCTTCCGGGTGGAAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: TEENIYFSAYNATLSTSDQENDK*LPGGNE Trigger: TTCATTTCCACCCGGAAGCAATTTGTCATTTTCTTG...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | GAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATCATAACTACTTGTGCTTCTaGAAGGTGAAACCAACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: EENIYFSAYNATLSTSDHNYLCF*KVKPTF Trigger: AAAAGTTGGTTTCACCTTCAAGAAGCACAAGTAGTT...ATGATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS-3UTR CAA 90 bp | ACTGAAGAAAATATATACTTCAGCGCTTACAATGCTACGCTAAGCACAAGTGATAACTACTTGTGCTTCTaGAAGGTGAAACCAACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TEENIYFSAYNATLSTSDNYLCF*KVKPTF Trigger: AAAAGTTGGTTTCACCTTCAAGAAGCACAAGTAGTT...ATCACTTGTGCTTAGCGTAGCATTGTAAGCGCTGAAGTATATATTTTCTTCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS GCA 72 bp | CACCAGGGCTCGGCCCTCATCCCTGGAGTTTTCCTCTaGCAGGTTGTCCCCCGGCTTGGGAACAGCGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: HQGSALIPGVFL*QVVPRLGNSGR Trigger: CCGCCCGCTGTTCCCAAGCCGGGGGACAACCTGGCAGAGGAAAACTCCAGGGATGAGGGCCGAGCCCTGGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 ENSMUST00000203907.3 |
||
| CDS CAA 90 bp | TGCACCAGGGCTCGGCCCTCATCCCTGGAGTTTTCCTCTGCCAGGTaGTCCCCCGGCTTGGGAACAGCGGGCGGGTCGAGGAGCAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: CTRARPSSLEFSSAR*SPGLGTAGGSRSRD Trigger: ATCTCTGCTCCTCGACCCGCCCGCTGTTCCCAAGCCGGGGGACAACCTGGCAGAGGAAAACTCCAGGGATGAGGGCCGAGCCCTGGTGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 ENSMUST00000203907.3 |
||
| CDS CCA 72 bp | CCCTGGAGTTTTCCTCTGCCAGGTTGTCCCCCGGCTTaGGAACAGCGGGCGGGTCGAGGAGCAGAGATTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PWSFPLPGCPPA*EQRAGRGAEIP Trigger: CGGAATCTCTGCTCCTCGACCCGCCCGCTGTTCCCAAGCCGGGGGACAACCTGGCAGAGGAAAACTCCAGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 ENSMUST00000203907.3 |
||
| CDS CCA 72 bp | TGGAGAGCTGGTGCACCAGGGCTCGGCCCTCATCCCTaGAGTTTTCCTCTGCCAGGTTGTCCCCCGGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: WRAGAPGLGPHP*SFPLPGCPPAW Trigger: CCAAGCCGGGGGACAACCTGGCAGAGGAAAACTCCAGGGATGAGGGCCGAGCCCTGGTGCACCAGCTCTCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 ENSMUST00000203907.3 |
||
| CDS CAA 72 bp | TCCCTGGAGTTTTCCTCTGCCAGGTTGTCCCCCGGCTaGGGAACAGCGGGCGGGTCGAGGAGCAGAGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLEFSSARLSPG*GTAGGSRSRDS Trigger: GGAATCTCTGCTCCTCGACCCGCCCGCTGTTCCCAAGCCGGGGGACAACCTGGCAGAGGAAAACTCCAGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 ENSMUST00000203907.3 |
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| CDS CAA 90 bp | CGGCCCTCATCCCTGGAGTTTTCCTCTGCCAGGTTGTCCCCCGGCTaGGGAACAGCGGGCGGGTCGAGGAGCAGAGATTCCGCATGGATT | + |
|
Preference number: 6 (lower is better) Translates to: RPSSLEFSSARLSPG*GTAGGSRSRDSAWI Trigger: AATCCATGCGGAATCTCTGCTCCTCGACCCGCCCGCTGTTCCCAAGCCGGGGGACAACCTGGCAGAGGAAAACTCCAGGGATGAGGGCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 ENSMUST00000203907.3 |
||
| CDS CCA 72 bp | TGGAGAGCTGGTGCACCAGGGCTCGGCCCTCATCCCTaGAGTTTTCGGATGACAGAGCGTGCTTCAGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: WRAGAPGLGPHP*SFRMTERASAR Trigger: TCGGGCTGAAGCACGCTCTGTCATCCGAAAACTCCAGGGATGAGGGCCGAGCCCTGGTGCACCAGCTCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071728.11 ENSMUST00000114466.8 |
||
| CDS CAA 90 bp | ACGCTACTGGTGTTGGGACCCGGTGCCGGCAAGCTGGTCCTCCTTTaGGATCTGGCTTCCCCACTACTCTCGAGAACAGGCCCCAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TLLVLGPGAGKLVLL*DLASPLLSRTGPKV Trigger: GACCTTGGGGCCTGTTCTCGAGAGTAGTGGGGAAGCCAGATCCAAAAGGAGGACCAGCTTGCCGGCACCGGGTCCCAACACCAGTAGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS GCA 72 bp | GCATCGTCACTGGATTTCCTGAAAAACCGGGGCTGGTaGTCCACACCGTTCTCCTCCAAGACCCTCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ASSLDFLKNRGW*STPFSSKTLRR Trigger: GCGGCGGAGGGTCTTGGAGGAGAACGGTGTGGAGCACCAGCCCCGGTTTTTCAGGAAATCCAGTGACGATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS CCA 72 bp | TGTTGGGACCCGGTGCCGGCAAGCTGGTCCTCCTTTTaGATCTGGCTTCCCCACTACTCTCGAGAACAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CWDPVPASWSSF*IWLPHYSREQA Trigger: GGCCTGTTCTCGAGAGTAGTGGGGAAGCCAGATCCAAAAGGAGGACCAGCTTGCCGGCACCGGGTCCCAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS CAA 72 bp | GTGTTGGGACCCGGTGCCGGCAAGCTGGTCCTCCTTTaGGATCTGGCTTCCCCACTACTCTCGAGAACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VLGPGAGKLVLL*DLASPLLSRTG Trigger: GCCTGTTCTCGAGAGTAGTGGGGAAGCCAGATCCAAAAGGAGGACCAGCTTGCCGGCACCGGGTCCCAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS GCA 72 bp | TCGGTGATAGACAGCCTGCTCTCATTGGAGAGCTGGTaGACCAGGGCTCGGCCCTCATCCCTGGAGTTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SVIDSLLSLESW*TRARPSSLEFS Trigger: CGAAAACTCCAGGGATGAGGGCCGAGCCCTGGTGCACCAGCTCTCCAATGAGAGCAGGCTGTCTATCACCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071728.11 ENSMUST00000114466.8 |
||
| CDS GCA 72 bp | TCGGTGATAGACAGCCTGCTCTCATTGGAGAGCTGGTaGACCAGGGCTCGGCCCTCATCCCTGGAGTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVIDSLLSLESW*TRARPSSLEFS Trigger: GGAAAACTCCAGGGATGAGGGCCGAGCCCTGGTGCACCAGCTCTCCAATGAGAGCAGGCTGTCTATCACCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 ENSMUST00000203907.3 |
||
| CDS CCA 72 bp | GAGTCGGTGATAGACAGCCTGCTCTCATTGGAGAGCTaGTGCACCAGGGCTCGGCCCTCATCCCTGGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ESVIDSLLSLES*CTRARPSSLEF Trigger: AAACTCCAGGGATGAGGGCCGAGCCCTGGTGCACCAGCTCTCCAATGAGAGCAGGCTGTCTATCACCGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 ENSMUST00000203907.3 |
||
| CDS CAA 72 bp | TCAGAAAGGGAGTCGGTGATAGACAGCCTGCTCTCATaGGAGAGCTGGTGCACCAGGGCTCGGCCCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SERESVIDSLLS*ESWCTRARPSS Trigger: GGATGAGGGCCGAGCCCTGGTGCACCAGCTCTCCAATGAGAGCAGGCTGTCTATCACCGACTCCCTTTCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 ENSMUST00000203907.3 |
||
| CDS GCA 72 bp | CGGCTTGCTGCCTGCTCGGAAGTAGCTGGATGCATATaGGGAGATGGCGAAGGCTGCTACGTACACCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: RLAACSEVAGCI*GDGEGCYVHHP Trigger: AGGATGGTGTACGTAGCAGCCTTCGCCATCTCCGCATATGCATCCAGCTACTTCCGAGCAGGCAGCAAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS CCA 72 bp | AGCCTTTCGGCATGGGATTTGCTCTCCAGACGCATGTaGAAGAGGAGGCGCCGCCACAGTAGATGCTCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: SLSAWDLLSRRM*KRRRRHSRCSR Trigger: ACGAGAGCATCTACTGTGGCGGCGCCTCCTCTTCCACATGCGTCTGGAGAGCAAATCCCATGCCGAAAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS CCA 72 bp | CAAGCATCGTCACTGGATTTCCTGAAAAACCGGGGCTaGTGCTCCACACCGTTCTCCTCCAAGACCCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QASSLDFLKNRG*CSTPFSSKTLR Trigger: GCGGAGGGTCTTGGAGGAGAACGGTGTGGAGCACCAGCCCCGGTTTTTCAGGAAATCCAGTGACGATGCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS CAA 90 bp | TCGAAGAACTCAGAAAGGGAGTCGGTGATAGACAGCCTGCTCTCATaGGAGAGCTGGTGCACCAGGGCTCGGCCCTCATCCCTGGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SKNSERESVIDSLLS*ESWCTRARPSSLEF Trigger: AAACTCCAGGGATGAGGGCCGAGCCCTGGTGCACCAGCTCTCCAATGAGAGCAGGCTGTCTATCACCGACTCCCTTTCTGAGTTCTTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 ENSMUST00000203907.3 |
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| CDS GCA 72 bp | CGTTTCTCCAAGGACCGGGTTAAACGGCTTGCTGCCTaGTCGGAAGTAGCTGGATGCATATGCGGAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: RFSKDRVKRLAA*SEVAGCICGDG Trigger: GCCATCTCCGCATATGCATCCAGCTACTTCCGAGCAGGCAGCAAGCCGTTTAACCCGGTCCTTGGAGAAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS GCA 72 bp | GCCATAATACTGCTCATAGCCTTTCGGCATGGGATTTaGTCTCCAGACGCATGTGGAAGAGGAGGCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: AIILLIAFRHGI*SPDACGRGGAA Trigger: GGCGGCGCCTCCTCTTCCACATGCGTCTGGAGAGCAAATCCCATGCCGAAAGGCTATGAGCAGTATTATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS CCA 72 bp | AGAAAAAGGCTTAGGGACCTGGATGGCGTTGATGGCTaGCGCCGAGTATGTCCGATGCAGGACGTCCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: RKRLRDLDGVDG*RRVCPMQDVHA Trigger: AGCATGGACGTCCTGCATCGGACATACTCGGCGCCAGCCATCAACGCCATCCAGGTCCCTAAGCCTTTTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071728.11 ENSMUST00000114468.9 |
||
| CDS CCA 72 bp | ACATCTTGCCAGAAAACAAAGTTTCCGGACTCAGCGTaGCAGGCGGAGATAGGTGGGTGGTGGCTGACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TSCQKTKFPDSA*QAEIGGWWLTC Trigger: GCAGGTCAGCCACCACCCACCTATCTCCGCCTGCCACGCTGAGTCCGGAAACTTTGTTTTCTGGCAAGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS CCA 72 bp | ACTTTCAAAAGCTCCACCCTGGATGGCGTTGATGGCTaGCGCCGAGTATGTCCGATGCAGGACGTCCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: TFKSSTLDGVDG*RRVCPMQDVHA Trigger: AGCATGGACGTCCTGCATCGGACATACTCGGCGCCAGCCATCAACGCCATCCAGGGTGGAGCTTTTGAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090019.10 ENSMUST00000114466.8 |
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| CDS GCA 72 bp | TGGATGGCGTTGATGGCTGGCGCCGAGTATGTCCGATaGAGGACGTCCATGCTTTCTAAGAGCTGGCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: WMALMAGAEYVR*RTSMLSKSWLI Trigger: AATGAGCCAGCTCTTAGAAAGCATGGACGTCCTGCATCGGACATACTCGGCGCCAGCCATCAACGCCATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS GCA 72 bp | GTTAAACGGCTTGCTGCCTGCTCGGAAGTAGCTGGATaGATATGCGGAGATGGCGAAGGCTGCTACGTACAC | + |
|
Preference number: 6 (lower is better) Translates to: VKRLAACSEVAG*ICGDGEGCYVH Trigger: GTGTACGTAGCAGCCTTCGCCATCTCCGCATATGCATCCAGCTACTTCCGAGCAGGCAGCAAGCCGTTTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS CAA 72 bp | ACTTTGTGGGCGACATGGCACAGATCCTCCTGCATCTaGGAGAACTCCGACGAGGCTTCAGAACCATCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: TLWATWHRSSCI*ENSDEASEPSE Trigger: CTCGGATGGTTCTGAAGCCTCGTCGGAGTTCTCCAAGATGCAGGAGGATCTGTGCCATGTCGCCCACAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 ENSMUST00000203907.3 |
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| CDS CAA 72 bp | AGCCATAATACTGCTCATAGCCTTTCGGCATGGGATTaGCTCTCCAGACGCATGTGGAAGAGGAGGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SHNTAHSLSAWD*LSRRMWKRRRR Trigger: GCGGCGCCTCCTCTTCCACATGCGTCTGGAGAGCAAATCCCATGCCGAAAGGCTATGAGCAGTATTATGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS TCA 72 bp | TCCCATTGCTTACCCAAGCATCGTCACTGGATTTCCTaGAAAACCGGGGCTGGTGCTCCACACCGTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SHCLPKHRHWIS*KTGAGAPHRSP Trigger: AGGAGAACGGTGTGGAGCACCAGCCCCGGTTTTTCAGGAAATCCAGTGACGATGCTTGGGTAAGCAATGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS GCA 72 bp | CCAAAGTCCAGCGTCGACAAGTTAGGATTGGAGGAGTaGAGTCTCACAGGGCCAGAAAAAGGCTTAGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: PKSSVDKLGLEE*SLTGPEKGLGT Trigger: GGTCCCTAAGCCTTTTTCTGGCCCTGTGAGACTGCACTCCTCCAATCCTAACTTGTCGACGCTGGACTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 ENSMUST00000203907.3 |
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| CDS TCA 72 bp | ACGGAGCTTGGACACCCACTCGTCAAAGAGTTCTTCTaGCTTCACCTTCAGGTGGTAGATGTGCTCCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: TELGHPLVKEFF*LHLQVVDVLLR Trigger: ACGGAGGAGCACATCTACCACCTGAAGGTGAAGTCAGAAGAACTCTTTGACGAGTGGGTGTCCAAGCTCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 ENSMUST00000146341.4 |
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| CDS GCA 72 bp | ACAGACATCACAGAGAGCCCCACGTCAATGCAGCCATaGAACTTCTCCCGCTCAATATCAGCTTGGCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TDITESPTSMQP*NFSRSISAWLL Trigger: CAAGAGCCAAGCTGATATTGAGCGGGAGAAGTTGCATGGCTGCATTGACGTGGGGCTCTCTGTGATGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 ENSMUST00000146341.4 |
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| CDS CCA 72 bp | TTCCCACTGCGGTCGAACACCGTGCCTTCGATCTCGTaGGCATTAGTGCTCCAGTACTTAGCCTTTATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FPLRSNTVPSIS*ALVLQYLAFMK Trigger: CTTCATAAAGGCTAAGTACTGGAGCACTAATGCCCACGAGATCGAAGGCACGGTGTTCGACCGCAGTGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS CCA 72 bp | GGAACAGCGGGCGGGTCGAGGAGCAGAGATTCCGCATaGATTCTGCGTAAGCGTTCTTTAAGATCTGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GTAGGSRSRDSA*ILRKRSLRSVF Trigger: AAACACAGATCTTAAAGAACGCTTACGCAGAATCCATGCGGAATCTCTGCTCCTCGACCCGCCCGCTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090019.10 ENSMUST00000114468.9 ENSMUST00000203907.3 |
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| CDS TCA 72 bp | AACATGGCGATCTCATTCTGCCGGTACATTCTGTGGTaGCGGAGCTTGGACACCCACTCGTCAAAGAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: NMAISFCRYILW*RSLDTHSSKSS Trigger: AGAACTCTTTGACGAGTGGGTGTCCAAGCTCCGTCACCACAGAATGTACCGGCAGAATGAGATCGCCATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS CAA 72 bp | TTCTCTTCTCCAAAGTCCAGCGTCGACAAGTTAGGATaGGAGGAGTGCAGTCTCACAGGGCCAGAAAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FSSPKSSVDKLG*EECSLTGPEKG Trigger: GCCTTTTTCTGGCCCTGTGAGACTGCACTCCTCCAATCCTAACTTGTCGACGCTGGACTTTGGAGAAGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 ENSMUST00000203907.3 |
||
| CDS TCA 72 bp | TCAGCCTCCTCTATGTTCCCTTCCTCTAGAAGCCTTTaGTCTGGTCTAAACCGAGTGTCGGTGGGTGGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: SASSMFPSSRSL*SGLNRVSVGGN Trigger: ATTACCACCCACCGACACTCGGTTTAGACCAGATCAAAGGCTTCTAGAGGAAGGGAACATAGAGGAGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS GCA 72 bp | CCTGCCGGCTTCCTTGCTTGGAGGAGCAACTACTTGTaGTTCTTGAAGGTGAAACCAACTTTTGAGACACAC | + |
|
Preference number: 6 (lower is better) Translates to: PAGFLAWRSNYL*FLKVKPTFETH Trigger: GTGTGTCTCAAAAGTTGGTTTCACCTTCAAGAAGCACAAGTAGTTGCTCCTCCAAGCAAGGAAGCCGGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 ENSMUST00000136926.3 ENSMUST00000146341.4 |
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| CDS GCA 72 bp | ACTTCTTCACAGACATCACAGAGAGCCCCACGTCAATaGAGCCATGCAACTTCTCCCGCTCAATATCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TSSQTSQRAPRQ*SHATSPAQYQL Trigger: AAGCTGATATTGAGCGGGAGAAGTTGCATGGCTGCATTGACGTGGGGCTCTCTGTGATGTCTGTGAAGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 ENSMUST00000146341.4 |
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| CDS GCA 72 bp | AGTGATCTCCAAAAGCAGGCAGAGTCACGTGGGTTGTaGCAATCGGGACAATTTCCATGGATTTACCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SDLQKQAESRGL*QSGQFPWIYPR Trigger: TCTGGGGTAAATCCATGGAAATTGTCCCGATTGGCACAACCCACGTGACTCTGCCTGCTTTTGGAGATCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS CCA 72 bp | TCTCATTCTGCCGGTACATTCTGTGGTGACGGAGCTTaGACACCCACTCGTCAAAGAGTTCTTCTGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SHSAGTFCGDGA*TPTRQRVLLTS Trigger: TGAAGTCAGAAGAACTCTTTGACGAGTGGGTGTCCAAGCTCCGTCACCACAGAATGTACCGGCAGAATGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS CAA 90 bp | AGCCAGAAAGGAACTCGAGTGTCGCCACCACAAGAAAATGACAAATaGCTTCCGGGTGGAAATGAATTCTGCTTTGATAGACTGCTACGC | + |
|
Preference number: 6 (lower is better) Translates to: SQKGTRVSPPQENDK*LPGGNEFCFDRLLR Trigger: GCGTAGCAGTCTATCAAAGCAGAATTCATTTCCACCCGGAAGCAATTTGTCATTTTCTTGTGGTGGCGACACTCGAGTTCCTTTCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS GCA 72 bp | TGCTTCCGGGTGGAAATGAATTCTGCTTTGATAGACTaGTACGCTTCCTACTGGAAACTGACTCGAACACTC | + |
|
Preference number: 6 (lower is better) Translates to: CFRVEMNSALID*YASYWKLTRTL Trigger: GAGTGTTCGAGTCAGTTTCCAGTAGGAAGCGTAGCAGTCTATCAAAGCAGAATTCATTTCCACCCGGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS CCA 72 bp | ATGCAGCCATGCAACTTCTCCCGCTCAATATCAGCTTaGCTCTTGGCATATTTCAAGATTCCCTTTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: MQPCNFSRSISA*LLAYFKIPFSR Trigger: CCTGGAAAAGGGAATCTTGAAATATGCCAAGAGCCAAGCTGATATTGAGCGGGAGAAGTTGCATGGCTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 ENSMUST00000146341.4 |
||
| CDS CCA 72 bp | ATGAATTCTGCTTTGATAGACTGCTACGCTTCCTACTaGAAACTGACTCGAACACTCCTGGGGCAGAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: MNSALIDCYASY*KLTRTLLGQNL Trigger: CAGATTCTGCCCCAGGAGTGTTCGAGTCAGTTTCCAGTAGGAAGCGTAGCAGTCTATCAAAGCAGAATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS GCA 72 bp | GAACTCGAGTGTCGCCACCACAAGAAAATGACAAATTaGTTCCGGGTGGAAATGAATTCTGCTTTGATAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ELECRHHKKMTN*FRVEMNSALID Trigger: GTCTATCAAAGCAGAATTCATTTCCACCCGGAAGCAATTTGTCATTTTCTTGTGGTGGCGACACTCGAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS CAA 72 bp | TTAGTGCTCCAGTACTTAGCCTTTATGAAGTTCACTTaGCAGTGGCAGGAGTCGTCATTCAGGTTCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LVLQYLAFMKFT*QWQESSFRFLM Trigger: CATCAAGAACCTGAATGACGACTCCTGCCACTGCAAAGTGAACTTCATAAAGGCTAAGTACTGGAGCACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
||
| CDS CAA 90 bp | CACAAGAAAATGACAAATTGCTTCCGGGTGGAAATGAATTCTGCTTaGATAGACTGCTACGCTTCCTACTGGAAACTGACTCGAACACTC | + |
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Preference number: 6 (lower is better) Translates to: HKKMTNCFRVEMNSA*IDCYASYWKLTRTL Trigger: GAGTGTTCGAGTCAGTTTCCAGTAGGAAGCGTAGCAGTCTATCAAAGCAGAATTCATTTCCACCCGGAAGCAATTTGTCATTTTCTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS CCA 72 bp | CTCCAGTACTTAGCCTTTATGAAGTTCACTTTGCAGTaGCAGGAGTCGTCATTCAGGTTCTTGATGTCAATT | + |
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Preference number: 6 (lower is better) Translates to: LQYLAFMKFTLQ*QESSFRFLMSI Trigger: AATTGACATCAAGAACCTGAATGACGACTCCTGCCACTGCAAAGTGAACTTCATAAAGGCTAAGTACTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS CAA 72 bp | ATGACAAATTGCTTCCGGGTGGAAATGAATTCTGCTTaGATAGACTGCTACGCTTCCTACTGGAAACTGACT | + |
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Preference number: 6 (lower is better) Translates to: MTNCFRVEMNSA*IDCYASYWKLT Trigger: AGTCAGTTTCCAGTAGGAAGCGTAGCAGTCTATCAAAGCAGAATTCATTTCCACCCGGAAGCAATTTGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS TCA 72 bp | AAGGATCCATTTCATTTAACTCTAGTGCAAACTGTGTaGAGCCATAATACTGCTCATAGCCTTTCGGCATGG | + |
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Preference number: 6 (lower is better) Translates to: KDPFHLTLVQTV*SHNTAHSLSAW Trigger: CCATGCCGAAAGGCTATGAGCAGTATTATGGCTTCACACAGTTTGCACTAGAGTTAAATGAAATGGATCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS CAA 90 bp | ACAGGCCCCAAGGTCTGTCTTTCATTGTCTAAATCATTACTGAGGTaGTCTAAGGACAGATTATCACTTATGTCACTGACGTATGAATCA | + |
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Preference number: 6 (lower is better) Translates to: TGPKVCLSLSKSLLR*SKDRLSLMSLTYES Trigger: TGATTCATACGTCAGTGACATAAGTGATAATCTGTCCTTAGACAACCTCAGTAATGATTTAGACAATGAAAGACAGACCTTGGGGCCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 |
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| CDS CAA 72 bp | AAGGTCTGTCTTTCATTGTCTAAATCATTACTGAGGTaGTCTAAGGACAGATTATCACTTATGTCACTGACG | + |
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Preference number: 6 (lower is better) Translates to: KVCLSLSKSLLR*SKDRLSLMSLT Trigger: CGTCAGTGACATAAGTGATAATCTGTCCTTAGACAACCTCAGTAATGATTTAGACAATGAAAGACAGACCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071728.11 ENSMUST00000090019.10 ENSMUST00000114466.8 ENSMUST00000114468.9 ENSMUST00000203907.3 |
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