Pregenerated sensors for OSBPL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039050Ensembl transcript IDs: ENSMUST00000040668.9
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGGTGTGGTCCACAGTGACAGTGAAGCTATGGAGCGCTGTGGATaGGGCAGGGCCTTCGAGGCTGGAGCGGCCCTGGGGGTTCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: TGVVHSDSEAMERCG*GRAFEAGAALGVPH Trigger: ATGAGGAACCCCCAGGGCCGCTCCAGCCTCGAAGGCCCTGCCTCATCCACAGCGCTCCATAGCTTCACTGTCACTGTGGACCACACCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR GCA 90 bp | GGCTGGAGCGGCCCTGGGGGTTCCTCATCTAAGTCACAGTGTTCCTaGCACTCTGGCTTGGCACGGGGACACTTTGTTTGGACGGTACAC | + |
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Preference number: 1 (lower is better) Translates to: GWSGPGGSSSKSQCS*HSGLARGHFVWTVH Trigger: GTGTACCGTCCAAACAAAGTGTCCCCGTGCCAAGCCAGAGTGGCAGGAACACTGTGACTTAGATGAGGAACCCCCAGGGCCGCTCCAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR TCA 90 bp | CTTGGGTCTGAGTTTGAAAGTCTTCCAGAACCCACGCCACAGCCTTaGGTGGAACACACAGGCCCTGCTGGGTCTTCCTTCATTATACAT | + |
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Preference number: 1 (lower is better) Translates to: LGSEFESLPEPTPQP*VEHTGPAGSSFIIH Trigger: ATGTATAATGAAGGAAGACCCAGCAGGGCCTGTGTGTTCCACTCAAGGCTGTGGCGTGGGTTCTGGAAGACTTTCAAACTCAGACCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR GCA 90 bp | AGGGCCTCTGTCACGTCCGAGGCTATCTCCATGATTTGTGGTGTCTaGCACCATAAAGCTCAGATGCTATTTGAGGATTCCAAGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: RASVTSEAISMICGV*HHKAQMLFEDSKAA Trigger: AGCAGCCTTGGAATCCTCAAATAGCATCTGAGCTTTATGGTGGCAGACACCACAAATCATGGAGATAGCCTCGGACGTGACAGAGGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR GCA 90 bp | TCTTCCAGAACCCACGCCACAGCCTTGAGTGGAACACACAGGCCCTaGTGGGTCTTCCTTCATTATACATTTTATAACAGAGTGTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: SSRTHATALSGTHRP*WVFLHYTFYNRVCC Trigger: GCAGCACACTCTGTTATAAAATGTATAATGAAGGAAGACCCAGCAGGGCCTGTGTGTTCCACTCAAGGCTGTGGCGTGGGTTCTGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR GCA 90 bp | CCCTGCTGGGTCTTCCTTCATTATACATTTTATAACAGAGTGTGCTaGCAGCTCTGCTGGCCTTTTACACTCTGTCATCTAGGAAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: PCWVFLHYTFYNRVC*QLCWPFTLCHLGKD Trigger: GTCCTTTCCTAGATGACAGAGTGTAAAAGGCCAGCAGAGCTGGCAGCACACTCTGTTATAAAATGTATAATGAAGGAAGACCCAGCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR CCA 90 bp | TTCCTTCATTATACATTTTATAACAGAGTGTGCTGCCAGCTCTGCTaGCCTTTTACACTCTGTCATCTAGGAAAGGACTGTGGAGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: FLHYTFYNRVCCQLC*PFTLCHLGKDCGVL Trigger: CAGAACTCCACAGTCCTTTCCTAGATGACAGAGTGTAAAAGGCCAGCAGAGCTGGCAGCACACTCTGTTATAAAATGTATAATGAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR CCA 90 bp | TGGAAGCCTGGACATAGTGATCATACCTTCTCATTTACAAATGCCTaGTGTGACTCACACTATGAATGCACAGGTGTGTACACAGTAGAT | + |
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Preference number: 1 (lower is better) Translates to: WKPGHSDHTFSFTNA*CDSHYECTGVYTVD Trigger: ATCTACTGTGTACACACCTGTGCATTCATAGTGTGAGTCACACCAGGCATTTGTAAATGAGAAGGTATGATCACTATGTCCAGGCTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR-3UTR TCA 90 bp | CATGCACACTGGGGAACCGAACACAAGACTTTGGGGGAGCAGGGAGGGCACACAATGGAGCGCTGTGGATaGGGCAGGGCCTTCGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: HAHWGTEHKTLGEQGGHTMERCG*GRAFEA Trigger: AGCCTCGAAGGCCCTGCCTCATCCACAGCGCTCCAT...TGTGTGCCCTCCCTGCTCCCCCAAAGTCTTGTGTTCGGTTCCCCAGTGTGCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGTGCTGCCAGCTCTGCTGGCCTTTTACACTCTGTCATCTAGGAAAGGACTGACGCACTGGGCAATCTaGGGCTCTCTGAGGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: SVLPALLAFYTLSSRKGLTHWAI*GSLRAS Trigger: AGAGGCCCTCAGAGAGCCTCAGATTGCCCAGTGCGT...CAGTCCTTTCCTAGATGACAGAGTGTAAAAGGCCAGCAGAGCTGGCAGCACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTTCCTCATCTAAGTCACAGTGTTCCTGCCACTCTGGCTTGGCACGGGGATCTAGGAAAGGACTGTaGAGTTCTGAGGCCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: GGSSSKSQCSCHSGLARGSRKGL*SSEASV Trigger: CACTGAGGCCTCAGAACTCCACAGTCCTTTCCTAGA...TCCCCGTGCCAAGCCAGAGTGGCAGGAACACTGTGACTTAGATGAGGAACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCCATCATGTGACAGGAATGCAGAGGTGGACACACCTACTTGTGTTAAAACACAGGGCCTTCGAGGCTaGAGCGGCCCTGGGGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: SPSCDRNAEVDTPTCVKTQGLRG*SGPGGS Trigger: GGAACCCCCAGGGCCGCTCCAGCCTCGAAGGCCCTG...TGTTTTAACACAAGTAGGTGTGTCCACCTCTGCATTCCTGTCACATGATGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR CAA 90 bp | AGGACACTTCCAGGATCCATGCTCCCCTCCTCCTTGGGTCTGAGTTaGAAAGTCTTCCAGAACCCACGCCACAGCCTTGAGTGGAACACA | + |
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Preference number: 2 (lower is better) Translates to: RTLPGSMLPSSLGLS*KVFQNPRHSLEWNT Trigger: TGTGTTCCACTCAAGGCTGTGGCGTGGGTTCTGGAAGACTTTCAAACTCAGACCCAAGGAGGAGGGGAGCATGGATCCTGGAAGTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR CAA 90 bp | CCTGGGGGTTCCTCATCTAAGTCACAGTGTTCCTGCCACTCTGGCTaGGCACGGGGACACTTTGTTTGGACGGTACACAGTGGTGATTAT | + |
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Preference number: 2 (lower is better) Translates to: PGGSSSKSQCSCHSG*ARGHFVWTVHSGDY Trigger: ATAATCACCACTGTGTACCGTCCAAACAAAGTGTCCCCGTGCCAAGCCAGAGTGGCAGGAACACTGTGACTTAGATGAGGAACCCCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCCATCATGTGACAGGAATGCAGAGGTGGACACACCTACTTGTGTTAAAACACGCCACAGCCTTGAGTaGAACACACAGGCCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SPSCDRNAEVDTPTCVKTRHSLE*NTQALL Trigger: CAGCAGGGCCTGTGTGTTCCACTCAAGGCTGTGGCG...TGTTTTAACACAAGTAGGTGTGTCCACCTCTGCATTCCTGTCACATGATGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR CAA 90 bp | CTAAGTCACAGTGTTCCTGCCACTCTGGCTTGGCACGGGGACACTTaGTTTGGACGGTACACAGTGGTGATTATGTGTTTGCTGCACTTT | + |
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Preference number: 2 (lower is better) Translates to: LSHSVPATLAWHGDT*FGRYTVVIMCLLHF Trigger: AAAGTGCAGCAAACACATAATCACCACTGTGTACCGTCCAAACAAAGTGTCCCCGTGCCAAGCCAGAGTGGCAGGAACACTGTGACTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR-3UTR GCA 90 bp | ACACTTCCAGGATCCATGCTCCCCTCCTCCTTGGGTCTGAGTTTGAAAGTCTTCTATAACAGAGTGTGCTaGCAGCTCTGCTGGCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: TLPGSMLPSSLGLSLKVFYNRVC*QLCWPF Trigger: AAAAGGCCAGCAGAGCTGGCAGCACACTCTGTTATA...GAAGACTTTCAAACTCAGACCCAAGGAGGAGGGGAGCATGGATCCTGGAAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCCATCATGTGACAGGAATGCAGAGGTGGACACACCTACTTGTGTTAAAACACCGAGGCTATCTCCATaGTTTGTGGTGTCTGCCACC | + |
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Preference number: 2 (lower is better) Translates to: SPSCDRNAEVDTPTCVKTPRLSP*FVVSAT Trigger: GGTGGCAGACACCACAAATCATGGAGATAGCCTCGG...TGTTTTAACACAAGTAGGTGTGTCCACCTCTGCATTCCTGTCACATGATGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR-3UTR GCA 90 bp | CACGCCACAGCCTTGAGTGGAACACACAGGCCCTGCTGGGTCTTCCTTCATTATACCATAAAGCTCAGATaGTATTTGAGGATTCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: HATALSGTHRPCWVFLHYTIKLR*YLRIPR Trigger: CCTTGGAATCCTCAAATAGCATCTGAGCTTTATGGT...ATAATGAAGGAAGACCCAGCAGGGCCTGTGTGTTCCACTCAAGGCTGTGGCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAATCTGGAGGCTTGTCACTTCATTCCACAAAGAAGGGGACCCTGGCCACAGATGATTTGTGGTGTCTaGCACCATAAAGCTCAGATG | + |
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Preference number: 2 (lower is better) Translates to: QNLEACHFIPQRRGPWPQMICGV*HHKAQM Trigger: CATCTGAGCTTTATGGTGGCAGACACCACAAATCAT...CTGTGGCCAGGGTCCCCTTCTTTGTGGAATGAAGTGACAAGCCTCCAGATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGTTTTAATGACAGAGGCAGTTTGGAAGCCTGGACATAGTGATCATACCTTCAGCTATGGAGCGCTGTaGATGAGGCAGGGCCTTCGA | + |
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Preference number: 2 (lower is better) Translates to: SVLMTEAVWKPGHSDHTFSYGAL*MRQGLR Trigger: TCGAAGGCCCTGCCTCATCCACAGCGCTCCATAGCT...GAAGGTATGATCACTATGTCCAGGCTTCCAAACTGCCTCTGTCATTAAAACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR-3UTR TCA 90 bp | AAAATACAGAATCTGGAGGCTTGTCACTTCATTCCACAAAGAAGGGGACCCTGGAGCTCAGATGCTATTTaGGGATTCCAAGGCTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: KIQNLEACHFIPQRRGPWSSDAI*GFQGCS Trigger: GGAGCAGCCTTGGAATCCTCAAATAGCATCTGAGCT...CCAGGGTCCCCTTCTTTGTGGAATGAAGTGACAAGCCTCCAGATTCTGTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR CCA 72 bp | TATGGAGCGCTGTGGATGAGGCAGGGCCTTCGAGGCTaGAGCGGCCCTGGGGGTTCCTCATCTAAGTCACAG | + |
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Preference number: 3 (lower is better) Translates to: YGALWMRQGLRG*SGPGGSSSKSQ Trigger: CTGTGACTTAGATGAGGAACCCCCAGGGCCGCTCCAGCCTCGAAGGCCCTGCCTCATCCACAGCGCTCCATA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR GCA 72 bp | GGCCCTGGGGGTTCCTCATCTAAGTCACAGTGTTCCTaGCACTCTGGCTTGGCACGGGGACACTTTGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: GPGGSSSKSQCS*HSGLARGHFVW Trigger: CCAAACAAAGTGTCCCCGTGCCAAGCCAGAGTGGCAGGAACACTGTGACTTAGATGAGGAACCCCCAGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR TCA 72 bp | TTTGGGGGAGCAGGGAGGGCACACAGGCGAGGTGAGTaGAGAAATGACCTTAGAGACAGGTGTGGTCCACAG | + |
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Preference number: 3 (lower is better) Translates to: FGGAGRAHRRGE*RNDLRDRCGPQ Trigger: CTGTGGACCACACCTGTCTCTAAGGTCATTTCTTCACTCACCTCGCCTGTGTGCCCTCCCTGCTCCCCCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR TCA 72 bp | GAGTTTGAAAGTCTTCCAGAACCCACGCCACAGCCTTaGGTGGAACACACAGGCCCTGCTGGGTCTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: EFESLPEPTPQP*VEHTGPAGSSF Trigger: GAAGGAAGACCCAGCAGGGCCTGTGTGTTCCACTCAAGGCTGTGGCGTGGGTTCTGGAAGACTTTCAAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR-3UTR CAA 90 bp | GGGGGTTCCTCATCTAAGTCACAGTGTTCCTGCCACTCTGGCTTGGCACGGGGAAAGCTCAGATGCTATTaGAGGATTCCAAGGCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: GGSSSKSQCSCHSGLARGKLRCY*RIPRLL Trigger: GAGCAGCCTTGGAATCCTCAAATAGCATCTGAGCTT...TCCCCGTGCCAAGCCAGAGTGGCAGGAACACTGTGACTTAGATGAGGAACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR CCA 72 bp | TTGAAAGTCTTCCAGAACCCACGCCACAGCCTTGAGTaGAACACACAGGCCCTGCTGGGTCTTCCTTCATTA | + |
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Preference number: 3 (lower is better) Translates to: LKVFQNPRHSLE*NTQALLGLPSL Trigger: TAATGAAGGAAGACCCAGCAGGGCCTGTGTGTTCCACTCAAGGCTGTGGCGTGGGTTCTGGAAGACTTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR CCA 72 bp | TCCTGCCACTCTGGCTTGGCACGGGGACACTTTGTTTaGACGGTACACAGTGGTGATTATGTGTTTGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: SCHSGLARGHFV*TVHSGDYVFAA Trigger: TGCAGCAAACACATAATCACCACTGTGTACCGTCCAAACAAAGTGTCCCCGTGCCAAGCCAGAGTGGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR TCA 72 bp | CATCTAGGAAAGGACTGTGGAGTTCTGAGGCCTCAGTaGCTAGAAAGACCCAACTGGAGCTTCATGAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: HLGKDCGVLRPQ*LERPNWSFMKG Trigger: CCCCTTCATGAAGCTCCAGTTGGGTCTTTCTAGTCACTGAGGCCTCAGAACTCCACAGTCCTTTCCTAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR-3UTR CAA 90 bp | AAAATACAGAATCTGGAGGCTTGTCACTTCATTCCACAAAGAAGGGGACCCTGGATGCTCCCCTCCTCCTaGGGTCTGAGTTTGAAAGTC | + |
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Preference number: 3 (lower is better) Translates to: KIQNLEACHFIPQRRGPWMLPSS*GLSLKV Trigger: GACTTTCAAACTCAGACCCAAGGAGGAGGGGAGCAT...CCAGGGTCCCCTTCTTTGTGGAATGAAGTGACAAGCCTCCAGATTCTGTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR GCA 72 bp | GTCACGTCCGAGGCTATCTCCATGATTTGTGGTGTCTaGCACCATAAAGCTCAGATGCTATTTGAGGATTCC | + |
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Preference number: 3 (lower is better) Translates to: VTSEAISMICGV*HHKAQMLFEDS Trigger: GGAATCCTCAAATAGCATCTGAGCTTTATGGTGGCAGACACCACAAATCATGGAGATAGCCTCGGACGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR GCA 72 bp | ACCCACGCCACAGCCTTGAGTGGAACACACAGGCCCTaGTGGGTCTTCCTTCATTATACATTTTATAACAGA | + |
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Preference number: 3 (lower is better) Translates to: THATALSGTHRP*WVFLHYTFYNR Trigger: TCTGTTATAAAATGTATAATGAAGGAAGACCCAGCAGGGCCTGTGTGTTCCACTCAAGGCTGTGGCGTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR-3UTR CAA 90 bp | AGTCCATCATGTGACAGGAATGCAGAGGTGGACACACCTACTTGTGTTAAAACAACAACCGAATGTAACTaGCCTGGACTGAAACATGCA | + |
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Preference number: 3 (lower is better) Translates to: SPSCDRNAEVDTPTCVKTTTECN*PGLKHA Trigger: TGCATGTTTCAGTCCAGGCAAGTTACATTCGGTTGT...TGTTTTAACACAAGTAGGTGTGTCCACCTCTGCATTCCTGTCACATGATGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR TCA 72 bp | CCTTGGTGTCACCATTTTTACATAAAGTCCATCATGTaGCAGGAATGCAGAGGTGGACACACCTACTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: PWCHHFYIKSIM*QECRGGHTYLC Trigger: ACACAAGTAGGTGTGTCCACCTCTGCATTCCTGTCACATGATGGACTTTATGTAAAAATGGTGACACCAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR TCA 72 bp | TATGAATGCACAGGTGTGTACACAGTAGATTATCTTTaGTGCAAAGAGCTCCACTGTGAGCCTTGGTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: YECTGVYTVDYL*CKELHCEPWCH Trigger: GTGACACCAAGGCTCACAGTGGAGCTCTTTGCATCAAAGATAATCTACTGTGTACACACCTGTGCATTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR GCA 72 bp | GTCTTCCTTCATTATACATTTTATAACAGAGTGTGCTaGCAGCTCTGCTGGCCTTTTACACTCTGTCATCTA | + |
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Preference number: 3 (lower is better) Translates to: VFLHYTFYNRVC*QLCWPFTLCHL Trigger: TAGATGACAGAGTGTAAAAGGCCAGCAGAGCTGGCAGCACACTCTGTTATAAAATGTATAATGAAGGAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR TCA 72 bp | CACAGTAGATTATCTTTGATGCAAAGAGCTCCACTGTaGGCCTTGGTGTCACCATTTTTACATAAAGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: HSRLSLMQRAPL*ALVSPFLHKVH Trigger: ATGGACTTTATGTAAAAATGGTGACACCAAGGCTCACAGTGGAGCTCTTTGCATCAAAGATAATCTACTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR CCA 72 bp | TTTACCTTATTCAAGATTGGTAGAAAATACAGAATCTaGAGGCTTGTCACTTCATTCCACAAAGAAGGGGAC | + |
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Preference number: 3 (lower is better) Translates to: FTLFKIGRKYRI*RLVTSFHKEGD Trigger: GTCCCCTTCTTTGTGGAATGAAGTGACAAGCCTCCAGATTCTGTATTTTCTACCAATCTTGAATAAGGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CCA 90 bp | CATGCACACTGGGGAACCGAACACAAGACTTTGGGGGAGCAGGGAGGGCACACATTGGCCTTCCTGGCCTaGTCACCTCTCTTCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: HAHWGTEHKTLGEQGGHTLAFLA*SPLFSC Trigger: GCAAGAGAAGAGAGGTGACCAGGCCAGGAAGGCCAA...TGTGTGCCCTCCCTGCTCCCCCAAAGTCTTGTGTTCGGTTCCCCAGTGTGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CCA 90 bp | CATGCACACTGGGGAACCGAACACAAGACTTTGGGGGAGCAGGGAGGGCACACACCATCTTGGCCTTCCTaGCCTGGTCACCTCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: HAHWGTEHKTLGEQGGHTPSWPS*PGHLSS Trigger: AGAAGAGAGGTGACCAGGCCAGGAAGGCCAAGATGG...TGTGTGCCCTCCCTGCTCCCCCAAAGTCTTGTGTTCGGTTCCCCAGTGTGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CCA 90 bp | GGGGGTTCCTCATCTAAGTCACAGTGTTCCTGCCACTCTGGCTTGGCACGGGGAGTAGGGGTTATTGCCTaGAGAGAACCACCTGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: GGSSSKSQCSCHSGLARGVGVIA*REPPGP Trigger: CGGACCAGGTGGTTCTCTCCAGGCAATAACCCCTAC...TCCCCGTGCCAAGCCAGAGTGGCAGGAACACTGTGACTTAGATGAGGAACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR CAA 72 bp | CTGAAACATGCACACTGGGGAACCGAACACAAGACTTaGGGGGAGCAGGGAGGGCACACAGGCGAGGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: LKHAHWGTEHKT*GEQGGHTGEVS Trigger: ACTCACCTCGCCTGTGTGCCCTCCCTGCTCCCCCAAAGTCTTGTGTTCGGTTCCCCAGTGTGCATGTTTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR GCA 90 bp | CCACAGGACACTTCCAGGATCCATGCTCCCCTCCTCCTTGGGTCTGAGTTTGAACACAGGAACGTCGTCTaGCACATCACCAGGCACATC | + |
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Preference number: 4 (lower is better) Translates to: PQDTSRIHAPLLLGSEFEHRNVV*HITRHI Trigger: GATGTGCCTGGTGATGTGGCAGACGACGTTCCTGTG...TTCAAACTCAGACCCAAGGAGGAGGGGAGCATGGATCCTGGAAGTGTCCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CCA 90 bp | CAGAACCCACGCCACAGCCTTGAGTGGAACACACAGGCCCTGCTGGGTCTTCCTCCAGAACTTCAGCTTTaGGTAGATGGAACCGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: QNPRHSLEWNTQALLGLPPELQL*VDGTVE Trigger: TTCCACGGTTCCATCTACCCAAAGCTGAAGTTCTGG...AGGAAGACCCAGCAGGGCCTGTGTGTTCCACTCAAGGCTGTGGCGTGGGTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CCA 90 bp | TACAGAATCTGGAGGCTTGTCACTTCATTCCACAAAGAAGGGGACCCTGGCCACGGAGGCGGCAGTCTGTaGGTGGCAGAGTCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: YRIWRLVTSFHKEGDPGHGGGSL*VAESSP Trigger: TGGAGAAGACTCTGCCACCCACAGACTGCCGCCTCC...GTGGCCAGGGTCCCCTTCTTTGTGGAATGAAGTGACAAGCCTCCAGATTCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CCA 90 bp | CACGCCACAGCCTTGAGTGGAACACACAGGCCCTGCTGGGTCTTCCTTCATTATGCTCCTTCTCCTGGCTaGCCAGATCCATGTTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: HATALSGTHRPCWVFLHYAPSPG*PDPCFR Trigger: ACGGAAACATGGATCTGGCCAGCCAGGAGAAGGAGC...ATAATGAAGGAAGACCCAGCAGGGCCTGTGTGTTCCACTCAAGGCTGTGGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR GCA 90 bp | CAGAATCTGGAGGCTTGTCACTTCATTCCACAAAGAAGGGGACCCTGGCCACAGTTTCTGGCCTCTCTCTaGTTTTCCTCTAGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QNLEACHFIPQRRGPWPQFLASL*FSSSRS Trigger: GGAGCGGCTAGAGGAAAAGCAGAGAGAGGCCAGAAA...CTGTGGCCAGGGTCCCCTTCTTTGTGGAATGAAGTGACAAGCCTCCAGATTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CCA 90 bp | GGCCCTGCTGGGTCTTCCTTCATTATACATTTTATAACAGAGTGTGCTGCCAGCGCGGCAGTCTGTGGGTaGCAGAGTCTTCTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPAGSSFIIHFITECAASAAVCG*QSLLHA Trigger: GGCATGGAGAAGACTCTGCCACCCACAGACTGCCGC...GCTGGCAGCACACTCTGTTATAAAATGTATAATGAAGGAAGACCCAGCAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CCA 90 bp | ACACTTCCAGGATCCATGCTCCCCTCCTCCTTGGGTCTGAGTTTGAAAGTCTTCAGCCGCTCCTTCTCCTaGCTGGCCAGATCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLPGSMLPSSLGLSLKVFSRSFS*LARSMF Trigger: AAACATGGATCTGGCCAGCCAGGAGAAGGAGCGGCT...GAAGACTTTCAAACTCAGACCCAAGGAGGAGGGGAGCATGGATCCTGGAAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR CAA 72 bp | TCCTCATCTAAGTCACAGTGTTCCTGCCACTCTGGCTaGGCACGGGGACACTTTGTTTGGACGGTACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSKSQCSCHSG*ARGHFVWTVHS Trigger: ACTGTGTACCGTCCAAACAAAGTGTCCCCGTGCCAAGCCAGAGTGGCAGGAACACTGTGACTTAGATGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR TCA 90 bp | GGTGTCTGCCACCATAAAGCTCAGATGCTATTTGAGGATTCCAAGGCTGCTCCTGCTCCATGTACTCTGTaGTCCGCTGCAGGAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVCHHKAQMLFEDSKAAPAPCTL*SAAGSS Trigger: TGAGCTTCCTGCAGCGGATCACAGAGTACATGGAGC...AGGAGCAGCCTTGGAATCCTCAAATAGCATCTGAGCTTTATGGTGGCAGACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR TCA 90 bp | ACACTTCCAGGATCCATGCTCCCCTCCTCCTTGGGTCTGAGTTTGAAAGTCTTCCGGCTGGGACTGACTTaGGGCTTTGTGAATGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLPGSMLPSSLGLSLKVFRLGLT*GFVNEV Trigger: TACCTCATTCACAAAGCCTCAAGTCAGTCCCAGCCG...GAAGACTTTCAAACTCAGACCCAAGGAGGAGGGGAGCATGGATCCTGGAAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR TCA 90 bp | GGGGGTTCCTCATCTAAGTCACAGTGTTCCTGCCACTCTGGCTTGGCACGGGGACCACAAGGCTTGAAGTaGAGTATACACTTATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGSSSKSQCSCHSGLARGPQGLK*SIHLSP Trigger: TGGAGATAAGTGTATACTTCACTTCAAGCCTTGTGG...TCCCCGTGCCAAGCCAGAGTGGCAGGAACACTGTGACTTAGATGAGGAACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR TCA 90 bp | CAGAACCCACGCCACAGCCTTGAGTGGAACACACAGGCCCTGCTGGGTCTTCCTTTCCTGTTTTTGTCTTaGATGTACCCTTCTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QNPRHSLEWNTQALLGLPFLFLS*MYPSTL Trigger: CAGAGTAGAAGGGTACATTCAAGACAAAAACAGGAA...AGGAAGACCCAGCAGGGCCTGTGTGTTCCACTCAAGGCTGTGGCGTGGGTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CCA 90 bp | GGGGGTTCCTCATCTAAGTCACAGTGTTCCTGCCACTCTGGCTTGGCACGGGGATCCATTCTCTTGTTGTaGTTTCTCCCCATTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGSSSKSQCSCHSGLARGSILLL*FLPIFP Trigger: GGGAAAAATGGGGAGAAACCACAACAAGAGAATGGA...TCCCCGTGCCAAGCCAGAGTGGCAGGAACACTGTGACTTAGATGAGGAACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CCA 90 bp | CACGCCACAGCCTTGAGTGGAACACACAGGCCCTGCTGGGTCTTCCTTCATTATTGTCTCTCCCAAGAGTaGGTTAAAGGGTTTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HATALSGTHRPCWVFLHYCLSQE*VKGFAS Trigger: ACTGGCAAACCCTTTAACCCACTCTTGGGAGAGACA...ATAATGAAGGAAGACCCAGCAGGGCCTGTGTGTTCCACTCAAGGCTGTGGCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR TCA 90 bp | CACGCCACAGCCTTGAGTGGAACACACAGGCCCTGCTGGGTCTTCCTTCATTATTTGAGGCTTTGTGAATaGGGTACACATGCTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: HATALSGTHRPCWVFLHYLRLCE*GTHAPC Trigger: ACATGGAGCATGTGTACCTCATTCACAAAGCCTCAA...ATAATGAAGGAAGACCCAGCAGGGCCTGTGTGTTCCACTCAAGGCTGTGGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
||
| CDS-3UTR TCA 90 bp | AGTGTGCTGCCAGCTCTGCTGGCCTTTTACACTCTGTCATCTAGGAAAGGACTGATAGCTGCCCAAGGATaGCATTGTGTACACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVLPALLAFYTLSSRKGLIAAQG*HCVHSR Trigger: CCTGCTGTGTACACAATGTCATCCTTGGGCAGCTAT...CAGTCCTTTCCTAGATGACAGAGTGTAAAAGGCCAGCAGAGCTGGCAGCACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
||
| CDS-3UTR GCA 90 bp | CACGCCACAGCCTTGAGTGGAACACACAGGCCCTGCTGGGTCTTCCTTCATTATTGCTCTATCCATAGCTaGCCAAGGATGACATTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HATALSGTHRPCWVFLHYCSIHS*PRMTLC Trigger: ACACAATGTCATCCTTGGGCAGCTATGGATAGAGCA...ATAATGAAGGAAGACCCAGCAGGGCCTGTGTGTTCCACTCAAGGCTGTGGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
||
| 3UTR CAA 72 bp | AGTGTTCCTGCCACTCTGGCTTGGCACGGGGACACTTaGTTTGGACGGTACACAGTGGTGATTATGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVPATLAWHGDT*FGRYTVVIMCL Trigger: CAAACACATAATCACCACTGTGTACCGTCCAAACAAAGTGTCCCCGTGCCAAGCCAGAGTGGCAGGAACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR TCA 90 bp | AGTGTGCTGCCAGCTCTGCTGGCCTTTTACACTCTGTCATCTAGGAAAGGACTGTATGTCTGGGCAGTCTaGGAAGTTACGCTCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVLPALLAFYTLSSRKGLYVWAV*EVTLKV Trigger: TACTTTGAGCGTAACTTCTCAGACTGCCCAGACATA...CAGTCCTTTCCTAGATGACAGAGTGTAAAAGGCCAGCAGAGCTGGCAGCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
||
| 3UTR CAA 72 bp | GCTTCTGACCTTCTATTGCACACAACCGAATGTAACTaGCCTGGACTGAAACATGCACACTGGGGAACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASDLLLHTTECN*PGLKHAHWGTE Trigger: TTCGGTTCCCCAGTGTGCATGTTTCAGTCCAGGCAAGTTACATTCGGTTGTGTGCAATAGAAGGTCAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR TCA 90 bp | AGTGTGCTGCCAGCTCTGCTGGCCTTTTACACTCTGTCATCTAGGAAAGGACTGCAGAATCAAAGCCTGTaGCGGCATCAAAGAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLPALLAFYTLSSRKGLQNQSL*RHQRIL Trigger: AAGAATTCTTTGATGCCGTCACAGGCTTTGATTCTG...CAGTCCTTTCCTAGATGACAGAGTGTAAAAGGCCAGCAGAGCTGGCAGCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR GCA 90 bp | GAGGCTATCTCCATGATTTGTGGTGTCTGCCACCATAAAGCTCAGATGCTATTTCTGTGTAGGGGTTATTaGCTGGAGAGAACCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EAISMICGVCHHKAQMLFLCRGY*LERTTW Trigger: CCAGGTGGTTCTCTCCAGGCAATAACCCCTACACAG...AAATAGCATCTGAGCTTTATGGTGGCAGACACCACAAATCATGGAGATAGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR GCA 90 bp | TACAGAATCTGGAGGCTTGTCACTTCATTCCACAAAGAAGGGGACCCTGGCCACTCACCTCTCTTCTCTTaGTTCTTAAAGGACTCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YRIWRLVTSFHKEGDPGHSPLFS*FLKDSY Trigger: ATACGAGTCCTTTAAGAAGCAAGAGAAGAGAGGTGA...GTGGCCAGGGTCCCCTTCTTTGTGGAATGAAGTGACAAGCCTCCAGATTCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR TCA 90 bp | ACACTTCCAGGATCCATGCTCCCCTCCTCCTTGGGTCTGAGTTTGAAAGTCTTCACAATCCACAAGGCTTaGAGTGAAGTATACACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TLPGSMLPSSLGLSLKVFTIHKA*SEVYTY Trigger: ATAAGTGTATACTTCACTTCAAGCCTTGTGGATTGT...GAAGACTTTCAAACTCAGACCCAAGGAGGAGGGGAGCATGGATCCTGGAAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCATCATGTGACAGGAATGCAGAGGTGGACACACCTACTTGTGTTAAAACAAGTCTTCTCCATGCCTaGCTCCAACTCATTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SPSCDRNAEVDTPTCVKTSLLHA*LQLIET Trigger: AGTCTCAATGAGTTGGAGTCAGGCATGGAGAAGACT...TGTTTTAACACAAGTAGGTGTGTCCACCTCTGCATTCCTGTCACATGATGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| 3UTR CAA 72 bp | TGTGTTAAAACAATTTTAATGACACCAGGTAAGATCTaGCTTCTGACCTTCTATTGCACACAACCGAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: CVKTILMTPGKI*LLTFYCTQPNV Trigger: TACATTCGGTTGTGTGCAATAGAAGGTCAGAAGCAAGATCTTACCTGGTGTCATTAAAATTGTTTTAACACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS CCA 90 bp | GCCGGCGTACAGCCAGTCAGGAGCTCCTGTGTAGGGGTTATTGCCTaGAGAGAACCACCTGGTCCGCCACTCTGCGTCCTCTTTGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: AGVQPVRSSCVGVIA*REPPGPPLCVLFGT Trigger: CGTGCCAAAGAGGACGCAGAGTGGCGGACCAGGTGGTTCTCTCCAGGCAATAACCCCTACACAGGAGCTCCTGACTGGCTGTACGCCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CAA 90 bp | CAGAACCCACGCCACAGCCTTGAGTGGAACACACAGGCCCTGCTGGGTCTTCCTATCCTCCAGAGCAGCTaGCTGCCGGGGATGACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QNPRHSLEWNTQALLGLPILQSS*LPGMTC Trigger: GCAAGTCATCCCCGGCAGCAAGCTGCTCTGGAGGAT...AGGAAGACCCAGCAGGGCCTGTGTGTTCCACTCAAGGCTGTGGCGTGGGTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS TCA 90 bp | ATCCTCCAGAGCAGCTTGCTGCCGGGGATGACTTGCACCGTCTCCTaGGCCACAGGAACGTCGTCTGCCACATCACCAGGCACATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ILQSSLLPGMTCTVS*ATGTSSATSPGTSL Trigger: CAGTGATGTGCCTGGTGATGTGGCAGACGACGTTCCTGTGGCTCAGGAGACGGTGCAAGTCATCCCCGGCAGCAAGCTGCTCTGGAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS GCA 90 bp | AATGGCCGGCGTACAGCCAGTCAGGAGCTCCTGTGTAGGGGTTATTaGCTGGAGAGAACCACCTGGTCCGCCACTCTGCGTCCTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NGRRTASQELLCRGY*LERTTWSATLRPLW Trigger: CCAAAGAGGACGCAGAGTGGCGGACCAGGTGGTTCTCTCCAGGCAATAACCCCTACACAGGAGCTCCTGACTGGCTGTACGCCGGCCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS GCA 90 bp | CGCCACTCTGCGTCCTCTTTGGCACGCTCTTTTCTGGCCTCTCTCTaGTTTTCCTCTAGCCGCTCCTTCTCCTGGCTGGCCAGATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RHSASSLARSFLASL*FSSSRSFSWLARSM Trigger: CATGGATCTGGCCAGCCAGGAGAAGGAGCGGCTAGAGGAAAAGCAGAGAGAGGCCAGAAAAGAGCGTGCCAAAGAGGACGCAGAGTGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS TCA 90 bp | TGGGTTAAAGGGTTTGCCAGTTCTCTCCCACTGGGAAGCCACAGCTaGGACCGCAAAGGCAGCGACAGACTGCATTCTCTCCAGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WVKGFASSLPLGSHS*DRKGSDRLHSLQRL Trigger: CAGCCGCTGGAGAGAATGCAGTCTGTCGCTGCCTTTGCGGTCTCAGCTGTGGCTTCCCAGTGGGAGAGAACTGGCAAACCCTTTAACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS CCA 90 bp | AGTCAGGAGCTCCTGTGTAGGGGTTATTGCCTGGAGAGAACCACCTaGTCCGCCACTCTGCGTCCTCTTTGGCACGCTCTTTTCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SQELLCRGYCLERTT*SATLRPLWHALFWP Trigger: AGGCCAGAAAAGAGCGTGCCAAAGAGGACGCAGAGTGGCGGACCAGGTGGTTCTCTCCAGGCAATAACCCCTACACAGGAGCTCCTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CAA 90 bp | TACAGAATCTGGAGGCTTGTCACTTCATTCCACAAAGAAGGGGACCCTGGCCACGGGCCATCATCCATCTaGGCCTTCCTGGCCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YRIWRLVTSFHKEGDPGHGPSSI*AFLAWS Trigger: TGACCAGGCCAGGAAGGCCAAGATGGATGATGGCCC...GTGGCCAGGGTCCCCTTCTTTGTGGAATGAAGTGACAAGCCTCCAGATTCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS TCA 90 bp | AGGACGGAGGCGGCAGTCTGTGGGTGGCAGAGTCTTCTCCATGCCTaGCTCCAACTCATTGAGACTCACAGTGAAGCTGGTAAAGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RTEAAVCGWQSLLHA*LQLIETHSEAGKVV Trigger: TACAACTTTACCAGCTTCACTGTGAGTCTCAATGAGTTGGAGTCAGGCATGGAGAAGACTCTGCCACCCACAGACTGCCGCCTCCGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CAA 90 bp | AAGGGGCTGCAACATAGTGACGCACTGGGCAATCTGAGGCTCTCTGAGGGCCTCGTCACCTCTCTTCTCTaGCTTCTTAAAGGACTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: KGLQHSDALGNLRLSEGLVTSLL*LLKGLV Trigger: TACGAGTCCTTTAAGAAGCAAGAGAAGAGAGGTGAC...GAGGCCCTCAGAGAGCCTCAGATTGCCCAGTGCGTCACTATGTTGCAGCCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CAA 90 bp | ACACTTCCAGGATCCATGCTCCCCTCCTCCTTGGGTCTGAGTTTGAAAGTCTTCAGTGGGTTAAAGGGTTaGCCAGTTCTCTCCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLPGSMLPSSLGLSLKVFSGLKG*PVLSHW Trigger: CCAGTGGGAGAGAACTGGCAAACCCTTTAACCCACT...GAAGACTTTCAAACTCAGACCCAAGGAGGAGGGGAGCATGGATCCTGGAAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS CCA 90 bp | CTGTTAGCTTTCTCGGGGCCATCATCCATCTTGGCCTTCCTGGCCTaGTCACCTCTCTTCTCTTGCTTCTTAAAGGACTCGTATGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLAFSGPSSILAFLA*SPLFSCFLKDSYEA Trigger: TGCTTCATACGAGTCCTTTAAGAAGCAAGAGAAGAGAGGTGACCAGGCCAGGAAGGCCAAGATGGATGATGGCCCCGAGAAAGCTAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS GCA 90 bp | CCATCATCCATCTTGGCCTTCCTGGCCTGGTCACCTCTCTTCTCTTaGTTCTTAAAGGACTCGTATGAAGCAGGATCTATTCCCCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSSILAFLAWSPLFS*FLKDSYEAGSIPHK Trigger: CTTGTGGGGAATAGATCCTGCTTCATACGAGTCCTTTAAGAAGCAAGAGAAGAGAGGTGACCAGGCCAGGAAGGCCAAGATGGATGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CAA 90 bp | GGTGTCTGCCACCATAAAGCTCAGATGCTATTTGAGGATTCCAAGGCTGCTCCTAAGCTCAGTGGCTCATaGAAGGCAATTGGCATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GVCHHKAQMLFEDSKAAPKLSGS*KAIGIV Trigger: CACAATGCCAATTGCCTTCAATGAGCCACTGAGCTT...AGGAGCAGCCTTGGAATCCTCAAATAGCATCTGAGCTTTATGGTGGCAGACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CAA 90 bp | AGTCCATCATGTGACAGGAATGCAGAGGTGGACACACCTACTTGTGTTAAAACATCCGCCTCCACACTCTaGCCCCAGAACTTCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SPSCDRNAEVDTPTCVKTSASTL*PQNFSF Trigger: AAAGCTGAAGTTCTGGGGCAAGAGTGTGGAGGCGGA...TGTTTTAACACAAGTAGGTGTGTCCACCTCTGCATTCCTGTCACATGATGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CAA 90 bp | AAAATACAGAATCTGGAGGCTTGTCACTTCATTCCACAAAGAAGGGGACCCTGGTGCCCAAGGATGACATaGTGTACACAGCAGGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KIQNLEACHFIPQRRGPWCPRMT*CTQQVG Trigger: CCCTACCTGCTGTGTACACAATGTCATCCTTGGGCA...CCAGGGTCCCCTTCTTTGTGGAATGAAGTGACAAGCCTCCAGATTCTGTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS TCA 90 bp | TGGGTAGATGGAACCGTGGAACCTGAAGTCTTGATTGAGACCTTCTaGATAAAATGCGCTAATAGGAGGGTGGTGACTGACCTGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WVDGTVEPEVLIETF*IKCANRRVVTDLLR Trigger: TCTGAGCAGGTCAGTCACCACCCTCCTATTAGCGCATTTTATTCAGAAGGTCTCAATCAAGACTTCAGGTTCCACGGTTCCATCTACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CAA 90 bp | AGTCCATCATGTGACAGGAATGCAGAGGTGGACACACCTACTTGTGTTAAAACACCCAGAACTTCAGCTTaGGGTAGATGGAACCGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPSCDRNAEVDTPTCVKTPRTSA*GRWNRG Trigger: TCCACGGTTCCATCTACCCAAAGCTGAAGTTCTGGG...TGTTTTAACACAAGTAGGTGTGTCCACCTCTGCATTCCTGTCACATGATGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS-3UTR CAA 90 bp | GAGGCTATCTCCATGATTTGTGGTGTCTGCCACCATAAAGCTCAGATGCTATTTCCTGACTCCAACTCATaGAGACTCACAGTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EAISMICGVCHHKAQMLFPDSNS*RLTVKL Trigger: CAGCTTCACTGTGAGTCTCAATGAGTTGGAGTCAGG...AAATAGCATCTGAGCTTTATGGTGGCAGACACCACAAATCATGGAGATAGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
||
| CDS-3UTR CAA 90 bp | GAGGCTATCTCCATGATTTGTGGTGTCTGCCACCATAAAGCTCAGATGCTATTTATTGGCATTGTGATCTaGGAGAGTTCCAAGCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: EAISMICGVCHHKAQMLFIGIVI*ESSKPM Trigger: CATTGGCTTGGAACTCTCCAAGATCACAATGCCAAT...AAATAGCATCTGAGCTTTATGGTGGCAGACACCACAAATCATGGAGATAGCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGCTGGGTCTTCCTTCATTATACATTTTATAACAGAGTGTGCTGCCAGCCTTCCTGTTTTTGTCTaGAATGTACCCTTCTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPAGSSFIIHFITECAASLPVFV*NVPFYS Trigger: AGAGTAGAAGGGTACATTCAAGACAAAAACAGGAAG...GCTGGCAGCACACTCTGTTATAAAATGTATAATGAAGGAAGACCCAGCAGGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
||
| CDS-3UTR CAA 90 bp | CCTGGACATAGTGATCATACCTTCTCATTTACAAATGCCTGGTGTGACTCACACTTGAATTCCATTCTCTaGTTGTGGTTTCTCCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: PGHSDHTFSFTNAWCDSHLNSIL*LWFLPI Trigger: AATGGGGAGAAACCACAACAAGAGAATGGAATTCAA...GTGTGAGTCACACCAGGCATTTGTAAATGAGAAGGTATGATCACTATGTCCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
||
| CDS TCA 72 bp | AGCAGCTTGCTGCCGGGGATGACTTGCACCGTCTCCTaGGCCACAGGAACGTCGTCTGCCACATCACCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLLPGMTCTVS*ATGTSSATSPG Trigger: GCCTGGTGATGTGGCAGACGACGTTCCTGTGGCTCAGGAGACGGTGCAAGTCATCCCCGGCAGCAAGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
||
| CDS CCA 72 bp | CAGCCAGTCAGGAGCTCCTGTGTAGGGGTTATTGCCTaGAGAGAACCACCTGGTCCGCCACTCTGCGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QPVRSSCVGVIA*REPPGPPLCVL Trigger: GAGGACGCAGAGTGGCGGACCAGGTGGTTCTCTCCAGGCAATAACCCCTACACAGGAGCTCCTGACTGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
||
| CDS CAA 72 bp | GTTGATCCTCCAGAGCAGCTTGCTGCCGGGGATGACTaGCACCGTCTCCTGAGCCACAGGAACGTCGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VDPPEQLAAGDD*HRLLSHRNVVC Trigger: GCAGACGACGTTCCTGTGGCTCAGGAGACGGTGCAAGTCATCCCCGGCAGCAAGCTGCTCTGGAGGATCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
||
| CDS GCA 72 bp | TCTCCTGGCTGGCCAGATCCATGTTTCCGTTCTCCATaGCTCGTATGTCAGGACGGAGGCGGCAGTCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SPGWPDPCFRSP*LVCQDGGGSLW Trigger: CCACAGACTGCCGCCTCCGTCCTGACATACGAGGCATGGAGAACGGAAACATGGATCTGGCCAGCCAGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS GCA 72 bp | CGTACAGCCAGTCAGGAGCTCCTGTGTAGGGGTTATTaGCTGGAGAGAACCACCTGGTCCGCCACTCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: RTASQELLCRGY*LERTTWSATLR Trigger: ACGCAGAGTGGCGGACCAGGTGGTTCTCTCCAGGCAATAACCCCTACACAGGAGCTCCTGACTGGCTGTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS CCA 72 bp | CCATGCCTCGTATGTCAGGACGGAGGCGGCAGTCTGTaGGTGGCAGAGTCTTCTCCATGCCTGACTCCAACT | + |
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Preference number: 6 (lower is better) Translates to: PCLVCQDGGGSL*VAESSPCLTPT Trigger: AGTTGGAGTCAGGCATGGAGAAGACTCTGCCACCCACAGACTGCCGCCTCCGTCCTGACATACGAGGCATGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS CCA 72 bp | CTCCTGTGTAGGGGTTATTGCCTGGAGAGAACCACCTaGTCCGCCACTCTGCGTCCTCTTTGGCACGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLCRGYCLERTT*SATLRPLWHAL Trigger: AAGAGCGTGCCAAAGAGGACGCAGAGTGGCGGACCAGGTGGTTCTCTCCAGGCAATAACCCCTACACAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS CAA 72 bp | GGAGAGAACCACCTGGTCCGCCACTCTGCGTCCTCTTaGGCACGCTCTTTTCTGGCCTCTCTCTGCTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GENHLVRHSASS*ARSFLASLCFS Trigger: GGAAAAGCAGAGAGAGGCCAGAAAAGAGCGTGCCAAAGAGGACGCAGAGTGGCGGACCAGGTGGTTCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS GCA 72 bp | GTTATTGCCTGGAGAGAACCACCTGGTCCGCCACTCTaGGTCCTCTTTGGCACGCTCTTTTCTGGCCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: VIAWREPPGPPL*VLFGTLFSGLS Trigger: AGAGAGGCCAGAAAAGAGCGTGCCAAAGAGGACGCAGAGTGGCGGACCAGGTGGTTCTCTCCAGGCAATAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS CCA 72 bp | GAGAGAACCACCTGGTCCGCCACTCTGCGTCCTCTTTaGCACGCTCTTTTCTGGCCTCTCTCTGCTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: ERTTWSATLRPL*HALFWPLSAFP Trigger: AGGAAAAGCAGAGAGAGGCCAGAAAAGAGCGTGCCAAAGAGGACGCAGAGTGGCGGACCAGGTGGTTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS TCA 72 bp | GCGGCAGTCTGTGGGTGGCAGAGTCTTCTCCATGCCTaGCTCCAACTCATTGAGACTCACAGTGAAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: AAVCGWQSLLHA*LQLIETHSEAG Trigger: ACCAGCTTCACTGTGAGTCTCAATGAGTTGGAGTCAGGCATGGAGAAGACTCTGCCACCCACAGACTGCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS CCA 72 bp | TTCTCGGGGCCATCATCCATCTTGGCCTTCCTGGCCTaGTCACCTCTCTTCTCTTGCTTCTTAAAGGACTCG | + |
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Preference number: 6 (lower is better) Translates to: FSGPSSILAFLA*SPLFSCFLKDS Trigger: CGAGTCCTTTAAGAAGCAAGAGAAGAGAGGTGACCAGGCCAGGAAGGCCAAGATGGATGATGGCCCCGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS CCA 72 bp | CTCCGCCTCCACACTCTTGCCCCAGAACTTCAGCTTTaGGTAGATGGAACCGTGGAACCTGAAGTCTTGATT | + |
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Preference number: 6 (lower is better) Translates to: LRLHTLAPELQL*VDGTVEPEVLI Trigger: AATCAAGACTTCAGGTTCCACGGTTCCATCTACCCAAAGCTGAAGTTCTGGGGCAAGAGTGTGGAGGCGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS CAA 90 bp | TCCCTGATCAACTCATATGTCTCTCCCAAGAGTGGGTTAAAGGGTTaGCCAGTTCTCTCCCACTGGGAAGCCACAGCTGAGACCGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SLINSYVSPKSGLKG*PVLSHWEATAETAK Trigger: CTTTGCGGTCTCAGCTGTGGCTTCCCAGTGGGAGAGAACTGGCAAACCCTTTAACCCACTCTTGGGAGAGACATATGAGTTGATCAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS CAA 90 bp | TGCAGGAAGCTCAGTGGCTCATTGAAGGCAATTGGCATTGTGATCTaGGAGAGTTCCAAGCCAATGCATTTCTTCAGGATACTCCACACA | + |
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Preference number: 6 (lower is better) Translates to: CRKLSGSLKAIGIVI*ESSKPMHFFRILHT Trigger: TGTGTGGAGTATCCTGAAGAAATGCATTGGCTTGGAACTCTCCAAGATCACAATGCCAATTGCCTTCAATGAGCCACTGAGCTTCCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS TCA 72 bp | GGAACCGTGGAACCTGAAGTCTTGATTGAGACCTTCTaGATAAAATGCGCTAATAGGAGGGTGGTGACTGAC | + |
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Preference number: 6 (lower is better) Translates to: GTVEPEVLIETF*IKCANRRVVTD Trigger: GTCAGTCACCACCCTCCTATTAGCGCATTTTATTCAGAAGGTCTCAATCAAGACTTCAGGTTCCACGGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS TCA 72 bp | GTCACCTCTCTTCTCTTGCTTCTTAAAGGACTCGTATaGAGCAGGATCTATTCCCCACAAGCACTCTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: VTSLLLLLKGLV*SRIYSPQALCP Trigger: TGGACAGAGTGCTTGTGGGGAATAGATCCTGCTTCATACGAGTCCTTTAAGAAGCAAGAGAAGAGAGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS GCA 72 bp | ATCTTGGCCTTCCTGGCCTGGTCACCTCTCTTCTCTTaGTTCTTAAAGGACTCGTATGAAGCAGGATCTATT | + |
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Preference number: 6 (lower is better) Translates to: ILAFLAWSPLFS*FLKDSYEAGSI Trigger: AATAGATCCTGCTTCATACGAGTCCTTTAAGAAGCAAGAGAAGAGAGGTGACCAGGCCAGGAAGGCCAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS CAA 72 bp | CTCAGTGGCTCATTGAAGGCAATTGGCATTGTGATCTaGGAGAGTTCCAAGCCAATGCATTTCTTCAGGATA | + |
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Preference number: 6 (lower is better) Translates to: LSGSLKAIGIVI*ESSKPMHFFRI Trigger: TATCCTGAAGAAATGCATTGGCTTGGAACTCTCCAAGATCACAATGCCAATTGCCTTCAATGAGCCACTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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| CDS CAA 72 bp | GAAGCAGGATCTATTCCCCACAAGCACTCTGTCCACTaGCCATACATGATAAAGAGCTTCTTCCTGTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: EAGSIPHKHSVH*PYMIKSFFLFL Trigger: CAAAAACAGGAAGAAGCTCTTTATCATGTATGGCAAGTGGACAGAGTGCTTGTGGGGAATAGATCCTGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040668.9 |
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