Pregenerated sensors for OSBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024687Ensembl transcript IDs: ENSMUST00000025590.11
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGAGGCAGCCGCAGGGTAGGCACAAAAACCTTCCTCCTTGTCCCTaGTCAGCAACTGCCACACATGACCCTGCTTGGGGTTGCAATGTC | + |
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Preference number: 1 (lower is better) Translates to: LRQPQGRHKNLPPCP*SATATHDPAWGCNV Trigger: GACATTGCAACCCCAAGCAGGGTCATGTGTGGCAGTTGCTGAGCAGGGACAAGGAGGAAGGTTTTTGTGCCTACCCTGCGGCTGCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR CCA 90 bp | CTTCCTCCTTGTCCCTGCTCAGCAACTGCCACACATGACCCTGCTTaGGGTTGCAATGTCCCTCAAACATGGAAAGCAGAGGCACCAACC | + |
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Preference number: 1 (lower is better) Translates to: LPPCPCSATATHDPA*GCNVPQTWKAEAPT Trigger: GGTTGGTGCCTCTGCTTTCCATGTTTGAGGGACATTGCAACCCCAAGCAGGGTCATGTGTGGCAGTTGCTGAGCAGGGACAAGGAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR GCA 90 bp | TTAAGACAGACAAATTTGAGGAAAGCACTCGGTAAGAGTCCCAACTaGCAGCCTTCCCGCACATCCTCTGCCGTCTTCTCCGATCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: LRQTNLRKALGKSPN*QPSRTSSAVFSDQP Trigger: GGGCTGATCGGAGAAGACGGCAGAGGATGTGCGGGAAGGCTGGCAGTTGGGACTCTTACCGAGTGCTTTCCTCAAATTTGTCTGTCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR GCA 90 bp | CCTTGTCCCTGCTCAGCAACTGCCACACATGACCCTGCTTGGGGTTaGAATGTCCCTCAAACATGGAAAGCAGAGGCACCAACCCATATT | + |
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Preference number: 1 (lower is better) Translates to: PCPCSATATHDPAWG*NVPQTWKAEAPTHI Trigger: AATATGGGTTGGTGCCTCTGCTTTCCATGTTTGAGGGACATTGCAACCCCAAGCAGGGTCATGTGTGGCAGTTGCTGAGCAGGGACAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR TCA 90 bp | AATCTTATGCAGATCTTGGCTGAGCAGGACACAGGTGAGGGTCAATaGCATCATCTCAATGAGGCCGAGAGGGAAGCACACTTACTTGCC | + |
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Preference number: 1 (lower is better) Translates to: NLMQILAEQDTGEGQ*HHLNEAEREAHLLA Trigger: GGCAAGTAAGTGTGCTTCCCTCTCGGCCTCATTGAGATGATGTCATTGACCCTCACCTGTGTCCTGCTCAGCCAAGATCTGCATAAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR CCA 90 bp | TCTGAAGTATACAGAATGGGTCAGGCAATGTTTTGCTCCAGACTGTaGCACAAACTCAAAATGGTACTGTGCCAGGAAACAGAAGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: SEVYRMGQAMFCSRL*HKLKMVLCQETEAR Trigger: TCTGGCTTCTGTTTCCTGGCACAGTACCATTTTGAGTTTGTGCCACAGTCTGGAGCAAAACATTGCCTGACCCATTCTGTATACTTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR GCA 90 bp | CACAAGGAAGGCACCTCAATTTATGACCCTCAACCAAGGGTGGGTTaGACAAGGGCTACATTTCTGAACAGGAAACTAGAACTAATAAAG | + |
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Preference number: 1 (lower is better) Translates to: HKEGTSIYDPQPRVG*TRATFLNRKLELIK Trigger: CTTTATTAGTTCTAGTTTCCTGTTCAGAAATGTAGCCCTTGTGCAACCCACCCTTGGTTGAGGGTCATAAATTGAGGTGCCTTCCTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR TCA 90 bp | AAGGCAACCAGCCAATCACCACCACGGGTGTCTGCTTCTGGTGATTaGTTTGGAAAAAGTGATTGGTTAAGACAGACAAATTTGAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: KATSQSPPRVSASGD*FGKSDWLRQTNLRK Trigger: TTTCCTCAAATTTGTCTGTCTTAACCAATCACTTTTTCCAAATCAATCACCAGAAGCAGACACCCGTGGTGGTGATTGGCTGGTTGCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR TCA 90 bp | ACAAAAACACTAACAAAAAGTACACAAGGAAGGCACCTCAATTTATaGCCCTCAACCAAGGGTGGGTTGCACAAGGGCTACATTTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: TKTLTKSTQGRHLNL*PSTKGGLHKGYISE Trigger: TTCAGAAATGTAGCCCTTGTGCAACCCACCCTTGGTTGAGGGTCATAAATTGAGGTGCCTTCCTTGTGTACTTTTTGTTAGTGTTTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAGAAAGGCAACGAAAGACGGATGAGGAGGGACTGGGAAGGTACAAGTGGACAGGTGAGGGTCAATaGCATCATCTCAATGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: KPERQRKTDEEGLGRYKWTGEGQ*HHLNEA Trigger: GGCCTCATTGAGATGATGTCATTGACCCTCACCTGT...CCACTTGTACCTTCCCAGTCCCTCCTCATCCGTCTTTCGTTGCCTTTCTGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGACCAGGACTTCCTTTCCAAGAGCCACGTGTGATCGGCAAAGCCGAGCTATGACATCATCTCAATaGGGCCGAGAGGGAAGCACA | + |
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Preference number: 2 (lower is better) Translates to: KKTRTSFPRATCDRQSRAMTSSQ*GREGST Trigger: TGTGCTTCCCTCTCGGCCTCATTGAGATGATGTCAT...AGCTCGGCTTTGCCGATCACACGTGGCTCTTGGAAAGGAAGTCCTGGTCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR-3UTR GCA 90 bp | GACCCTCAACCAAGGGTGGGTTGCACAAGGGCTACATTTCTGAACAGGAAACTAAGTCTTCTCCCACCCTaGCTGTGTTTGCAGAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: DPQPRVGCTRATFLNRKLSLLPP*LCLQRF Trigger: GAACCTCTGCAAACACAGGCAGGGTGGGAGAAGACT...TAGTTTCCTGTTCAGAAATGTAGCCCTTGTGCAACCCACCCTTGGTTGAGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGCAACGAAAGACGGATGAGGAGGGACTGGGAAGGTACAAGTGGCTAGCAATCTTATGCAGATCTTaGCTGAGCAGGACACAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ERQRKTDEEGLGRYKWLAILCRS*LSRTQV Trigger: CACCTGTGTCCTGCTCAGCCAAGATCTGCATAAGAT...TGCTAGCCACTTGTACCTTCCCAGTCCCTCCTCATCCGTCTTTCGTTGCCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR-3UTR TCA 90 bp | GGGAATCAAGCTAGAAATGTAGTGCAGATAGAGGGAAAGGGGAAAGCACAGAGGATATTAACGCGCACTTaGGAGAGTCCCAGGGAGACA | + |
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Preference number: 2 (lower is better) Translates to: GNQARNVVQIEGKGKAQRILTRT*ESPRET Trigger: TGTCTCCCTGGGACTCTCTCAAGTGCGCGTTAATAT...CCTCTGTGCTTTCCCCTTTCCCTCTATCTGCACTACATTTCTAGCTTGATTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR-3UTR TCA 90 bp | GCACAAACTCAAAATGGTACTGTGCCAGGAAACAGAAGCCAGAAAGGCAACGAAGTACACTTCATACACTaGGACCTAGGCGTGATGCCT | + |
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Preference number: 2 (lower is better) Translates to: AQTQNGTVPGNRSQKGNEVHFIH*DLGVMP Trigger: AGGCATCACGCCTAGGTCTCAGTGTATGAAGTGTAC...TTCGTTGCCTTTCTGGCTTCTGTTTCCTGGCACAGTACCATTTTGAGTTTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR-3UTR GCA 90 bp | GACCCTCAACCAAGGGTGGGTTGCACAAGGGCTACATTTCTGAACAGGAAACTAACTCTCTCCTGCAGATaGTCCAAAGCCTTAGTTATC | + |
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Preference number: 2 (lower is better) Translates to: DPQPRVGCTRATFLNRKLTLSCR*SKALVI Trigger: GATAACTAAGGCTTTGGAGCATCTGCAGGAGAGAGT...TAGTTTCCTGTTCAGAAATGTAGCCCTTGTGCAACCCACCCTTGGTTGAGGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR-3UTR CCA 90 bp | GGGAATCAAGCTAGAAATGTAGTGCAGATAGAGGGAAAGGGGAAAGCACAGAGGAAAATCCAATTTCCCTaGAGGGATAGCTTCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GNQARNVVQIEGKGKAQRKIQFP*RDSFLW Trigger: CCAGAGGAAGCTATCCCTCCAGGGAAATTGGATTTT...CCTCTGTGCTTTCCCCTTTCCCTCTATCTGCACTACATTTCTAGCTTGATTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR-3UTR GCA 90 bp | CAAAAAGTACACAAGGAAGGCACCTCAATTTATGACCCTCAACCAAGGGTGGGTCTCAAAATGGTACTGTaGCAGGAAACAGAAGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: QKVHKEGTSIYDPQPRVGLKMVL*QETEAR Trigger: TCTGGCTTCTGTTTCCTGGCACAGTACCATTTTGAG...ACCCACCCTTGGTTGAGGGTCATAAATTGAGGTGCCTTCCTTGTGTACTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR-3UTR CCA 90 bp | AGAAATCACCCTCTTGACTTTCTACCCGTACGCCTCCTAGGGAAGGAAACTGAGCTGAAGTATACAGAATaGGTCAGGCAATGTTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: RNHPLDFLPVRLLGKETELKYTE*VRQCFA Trigger: AGCAAAACATTGCCTGACCCATTCTGTATACTTCAG...CTCAGTTTCCTTCCCTAGGAGGCGTACGGGTAGAAAGTCAAGAGGGTGATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR-3UTR TCA 90 bp | CAAAAAGTACACAAGGAAGGCACCTCAATTTATGACCCTCAACCAAGGGTGGGTACTTCTCTAAGATTCTaGAGTATACAGAATGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: QKVHKEGTSIYDPQPRVGTSLRF*SIQNGS Trigger: TGACCCATTCTGTATACTTCAGAATCTTAGAGAAGT...ACCCACCCTTGGTTGAGGGTCATAAATTGAGGTGCCTTCCTTGTGTACTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR CCA 72 bp | CGAAAGACGGATGAGGAGGGACTGGGAAGGTACAAGTaGCTAGCAGTCTTCTCCCACCCTGCCTGTGTTTGC | + |
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Preference number: 3 (lower is better) Translates to: RKTDEEGLGRYK*LAVFSHPACVC Trigger: GCAAACACAGGCAGGGTGGGAGAAGACTGCTAGCCACTTGTACCTTCCCAGTCCCTCCTCATCCGTCTTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR TCA 72 bp | CAGATCTTGGCTGAGCAGGACACAGGTGAGGGTCAATaGCATCATCTCAATGAGGCCGAGAGGGAAGCACAC | + |
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Preference number: 3 (lower is better) Translates to: QILAEQDTGEGQ*HHLNEAEREAH Trigger: GTGTGCTTCCCTCTCGGCCTCATTGAGATGATGTCATTGACCCTCACCTGTGTCCTGCTCAGCCAAGATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR GCA 72 bp | ACAAATTTGAGGAAAGCACTCGGTAAGAGTCCCAACTaGCAGCCTTCCCGCACATCCTCTGCCGTCTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: TNLRKALGKSPN*QPSRTSSAVFS Trigger: GGAGAAGACGGCAGAGGATGTGCGGGAAGGCTGGCAGTTGGGACTCTTACCGAGTGCTTTCCTCAAATTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR GCA 72 bp | TGCTCAGCAACTGCCACACATGACCCTGCTTGGGGTTaGAATGTCCCTCAAACATGGAAAGCAGAGGCACCA | + |
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Preference number: 3 (lower is better) Translates to: CSATATHDPAWG*NVPQTWKAEAP Trigger: TGGTGCCTCTGCTTTCCATGTTTGAGGGACATTGCAACCCCAAGCAGGGTCATGTGTGGCAGTTGCTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR CCA 72 bp | TGTCCCTGCTCAGCAACTGCCACACATGACCCTGCTTaGGGTTGCAATGTCCCTCAAACATGGAAAGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: CPCSATATHDPA*GCNVPQTWKAE Trigger: CTCTGCTTTCCATGTTTGAGGGACATTGCAACCCCAAGCAGGGTCATGTGTGGCAGTTGCTGAGCAGGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR CCA 72 bp | CCATTTTATGGGCCTCCCTGGAGTAACCCCTTGTGCTaGGGAAGCCTTCTTAGGAGGAAATTCCCTAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: PFYGPPWSNPLC*GSLLRRKFPSA Trigger: AGCACTAGGGAATTTCCTCCTAAGAAGGCTTCCCCAGCACAAGGGGTTACTCCAGGGAGGCCCATAAAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR-3UTR CAA 90 bp | AGAAATCACCCTCTTGACTTTCTACCCGTACGCCTCCTAGGGAAGGAAACTGAGCATATTAACGCGCACTaGAGAGAGTCCCAGGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: RNHPLDFLPVRLLGKETEHINAH*RESQGD Trigger: GTCTCCCTGGGACTCTCTCAAGTGCGCGTTAATATG...CTCAGTTTCCTTCCCTAGGAGGCGTACGGGTAGAAAGTCAAGAGGGTGATTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR TCA 72 bp | GGTTCTCCACCTGAGGGAGTCCATAAAACCCCTTTATaGGGAGCGTGTGACCCTCTTATCAACGACCAAGGA | + |
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Preference number: 3 (lower is better) Translates to: GSPPEGVHKTPL*GACDPLINDQG Trigger: TCCTTGGTCGTTGATAAGAGGGTCACACGCTCCTCATAAAGGGGTTTTATGGACTCCCTCAGGTGGAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR-3UTR CAA 90 bp | TATGACCCTCAACCAAGGGTGGGTTGCACAAGGGCTACATTTCTGAACAGGAAAAATCTTATGCAGATCTaGGCTGAGCAGGACACAGGT | + |
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Preference number: 3 (lower is better) Translates to: YDPQPRVGCTRATFLNRKNLMQI*AEQDTG Trigger: ACCTGTGTCCTGCTCAGCCAAGATCTGCATAAGATT...TTTCCTGTTCAGAAATGTAGCCCTTGTGCAACCCACCCTTGGTTGAGGGTCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR GCA 72 bp | AATATTCAAGCCCTAGAGAACACTCTCTCCTGCAGATaGTCCAAAGCCTTAGTTATCTACACGCGACGACCT | + |
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Preference number: 3 (lower is better) Translates to: NIQALENTLSCR*SKALVIYTRRP Trigger: AGGTCGTCGCGTGTAGATAACTAAGGCTTTGGAGCATCTGCAGGAGAGAGTGTTCTCTAGGGCTTGAATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR GCA 72 bp | GGCACCTCAATTTATGACCCTCAACCAAGGGTGGGTTaGACAAGGGCTACATTTCTGAACAGGAAACTAGAA | + |
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Preference number: 3 (lower is better) Translates to: GTSIYDPQPRVG*TRATFLNRKLE Trigger: TTCTAGTTTCCTGTTCAGAAATGTAGCCCTTGTGCAACCCACCCTTGGTTGAGGGTCATAAATTGAGGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR-3UTR CAA 90 bp | TCCAGACTGTGGCACAAACTCAAAATGGTACTGTGCCAGGAAACAGAAGCCAGACACACTTACTTGCCTTaGAGATGTAGAGGAACACTA | + |
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Preference number: 3 (lower is better) Translates to: SRLWHKLKMVLCQETEARHTYLP*RCRGTL Trigger: TAGTGTTCCTCTACATCTCAAAGGCAAGTAAGTGTG...TCTGGCTTCTGTTTCCTGGCACAGTACCATTTTGAGTTTGTGCCACAGTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR CCA 72 bp | TACAGAATGGGTCAGGCAATGTTTTGCTCCAGACTGTaGCACAAACTCAAAATGGTACTGTGCCAGGAAACA | + |
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Preference number: 3 (lower is better) Translates to: YRMGQAMFCSRL*HKLKMVLCQET Trigger: TGTTTCCTGGCACAGTACCATTTTGAGTTTGTGCCACAGTCTGGAGCAAAACATTGCCTGACCCATTCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR CCA 72 bp | CCTTGGAAGGAAACGTTTTTGGGATTTAGCCTGAGCTaGGACATAAGGAAGCTAGAAATCACCCTCTTGACT | + |
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Preference number: 3 (lower is better) Translates to: PWKETFLGFSLS*DIRKLEITLLT Trigger: AGTCAAGAGGGTGATTTCTAGCTTCCTTATGTCCCAGCTCAGGCTAAATCCCAAAAACGTTTCCTTCCAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR TCA 72 bp | AGCCAATCACCACCACGGGTGTCTGCTTCTGGTGATTaGTTTGGAAAAAGTGATTGGTTAAGACAGACAAAT | + |
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Preference number: 3 (lower is better) Translates to: SQSPPRVSASGD*FGKSDWLRQTN Trigger: ATTTGTCTGTCTTAACCAATCACTTTTTCCAAATCAATCACCAGAAGCAGACACCCGTGGTGGTGATTGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| 3UTR TCA 72 bp | GAAAACATTTGTTGCAGAGGAACTTCTCTAAGATTCTaGAGTATACAGAATGGGTCAGGCAATGTTTTGCTC | + |
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Preference number: 3 (lower is better) Translates to: ENICCRGTSLRF*SIQNGSGNVLL Trigger: GAGCAAAACATTGCCTGACCCATTCTGTATACTTCAGAATCTTAGAGAAGTTCCTCTGCAACAAATGTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR CCA 90 bp | TCCCAACTGCCAGCCTTCCCGCACATCCTCTGCCGTCTTCTCCGATCAGCCCTCGCCCGGAGGGTTTGCTaGCAGCACTGTGGCTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: SQLPAFPHILCRLLRSALARRVC*QHCGSP Trigger: CGGGGAGCCACAGTGCTGCCAGCAAACCCTCCGGGC...GAGGGCTGATCGGAGAAGACGGCAGAGGATGTGCGGGAAGGCTGGCAGTTGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR GCA 90 bp | TCCCAACTGCCAGCCTTCCCGCACATCCTCTGCCGTCTTCTCCGATCAGCCCTCTACCAGACCCAGCGCTaGCCGGAGGGTTTGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SQLPAFPHILCRLLRSALYQTQR*PEGLLA Trigger: TGCCAGCAAACCCTCCGGGCAGCGCTGGGTCTGGTA...GAGGGCTGATCGGAGAAGACGGCAGAGGATGTGCGGGAAGGCTGGCAGTTGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR CCA 90 bp | CAGCCGCAGGGTAGGCACAAAAACCTTCCTCCTTGTCCCTGCTCAGCAACTGCCGGTCCTCCACTTTGCTaGAGAGTGTTCGCAGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: QPQGRHKNLPPCPCSATAGPPLC*RVFAGC Trigger: GCACCCTGCGAACACTCTCCAGCAAAGTGGAGGACC...GGCAGTTGCTGAGCAGGGACAAGGAGGAAGGTTTTTGTGCCTACCCTGCGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR TCA 90 bp | AGAAATCACCCTCTTGACTTTCTACCCGTACGCCTCCTAGGGAAGGAAACTGAGGGGACTCCAGCTCACTaGGGGAACGCTGCAGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RNHPLDFLPVRLLGKETEGTPAH*GNAAGR Trigger: CCGCCCTGCAGCGTTCCCTCAGTGAGCTGGAGTCCC...CTCAGTTTCCTTCCCTAGGAGGCGTACGGGTAGAAAGTCAAGAGGGTGATTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR TCA 90 bp | CCCACCCTGCCTGTGTTTGCAGAGGTTCTCCACCTGAGGGAGTCCATAAAACCCCCCCAAGGAGAGGGTTaGATGGCTTGCTGGTTCGGA | + |
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Preference number: 4 (lower is better) Translates to: PTLPVFAEVLHLRESIKPPQGEG*MACWFG Trigger: TCCGAACCAGCAAGCCATTCAACCCTCTCCTTGGGG...GGGTTTTATGGACTCCCTCAGGTGGAGAACCTCTGCAAACACAGGCAGGGTGGG 58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR TCA 90 bp | TCCCAACTGCCAGCCTTCCCGCACATCCTCTGCCGTCTTCTCCGATCAGCCCTCTCAATCTCACCAGACTaGTCTATCCACAACTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SQLPAFPHILCRLLRSALSISPD*SIHNLP Trigger: GGGCAAGTTGTGGATAGATCAGTCTGGTGAGATTGA...GAGGGCTGATCGGAGAAGACGGCAGAGGATGTGCGGGAAGGCTGGCAGTTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR CCA 90 bp | CACTCGGTAAGAGTCCCAACTGCCAGCCTTCCCGCACATCCTCTGCCGTCTTCTTCACAGCCTTGGCCTTaGCCAGTTCTAAGGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: HSVRVPTASLPAHPLPSSSQPWP*PVLRLS Trigger: TGACAGCCTTAGAACTGGCCAAGGCCAAGGCTGTGA...AGAAGACGGCAGAGGATGTGCGGGAAGGCTGGCAGTTGGGACTCTTACCGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR CCA 90 bp | AAGCCAGAAAGGCAACGAAAGACGGATGAGGAGGGACTGGGAAGGTACAAGTGGTTGCTGGCAGCACTGTaGCTCCCCGGAAGGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: KPERQRKTDEEGLGRYKWLLAAL*LPGRLS Trigger: AGAGAGCCTTCCGGGGAGCCACAGTGCTGCCAGCAA...CCACTTGTACCTTCCCAGTCCCTCCTCATCCGTCTTTCGTTGCCTTTCTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR CCA 90 bp | TCCCAACTGCCAGCCTTCCCGCACATCCTCTGCCGTCTTCTCCGATCAGCCCTCCTGCCAGTACGTTTGTaGCCCAAATTTTCAGGCATG | + |
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Preference number: 4 (lower is better) Translates to: SQLPAFPHILCRLLRSALLPVRL*PKFSGM Trigger: CATGCCTGAAAATTTGGGCCACAAACGTACTGGCAG...GAGGGCTGATCGGAGAAGACGGCAGAGGATGTGCGGGAAGGCTGGCAGTTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR TCA 90 bp | CAGCTAAGGCAACCAGCCAATCACCACCACGGGTGTCTGCTTCTGGTGATTGATAGTCGTTGCACGTGCTaGGGTCCTCCACTTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: QLRQPANHHHGCLLLVIDSRCTC*GPPLCW Trigger: CCAGCAAAGTGGAGGACCTCAGCACGTGCAACGACT...ATCAATCACCAGAAGCAGACACCCGTGGTGGTGATTGGCTGGTTGCCTTAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR GCA 90 bp | GAAAGGCAACGAAAGACGGATGAGGAGGGACTGGGAAGGTACAAGTGGCTAGCAGCTTCATGGCCTCTCTaGCGAGCATCACCCCCATTC | + |
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Preference number: 4 (lower is better) Translates to: ERQRKTDEEGLGRYKWLAASWPL*RASPPF Trigger: GAATGGGGGTGATGCTCGGCAGAGAGGCCATGAAGC...TGCTAGCCACTTGTACCTTCCCAGTCCCTCCTCATCCGTCTTTCGTTGCCTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR GCA 90 bp | CAGCCGCAGGGTAGGCACAAAAACCTTCCTCCTTGTCCCTGCTCAGCAACTGCCCTGCTTCTCAGCATTTaGTTCATCCCAACGCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: QPQGRHKNLPPCPCSATALLLSI*FIPTPV Trigger: AACGGGCGTTGGGATGAAGCAAATGCTGAGAAGCAG...GGCAGTTGCTGAGCAGGGACAAGGAGGAAGGTTTTTGTGCCTACCCTGCGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CCA 90 bp | CAGCCGCAGGGTAGGCACAAAAACCTTCCTCCTTGTCCCTGCTCAGCAACTGCCTTTATAGGGGTCATGTaGTGTGCCATCTTCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPQGRHKNLPPCPCSATAFIGVM*CAIFRG Trigger: GCCACGGAAGATGGCACACCACATGACCCCTATAAA...GGCAGTTGCTGAGCAGGGACAAGGAGGAAGGTTTTTGTGCCTACCCTGCGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR TCA 90 bp | CAGCTAAGGCAACCAGCCAATCACCACCACGGGTGTCTGCTTCTGGTGATTGATACTGTTCATCAAGGCTaGCATCACTGCTGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLRQPANHHHGCLLLVIDTVHQG*HHCWPH Trigger: GTGGGGCCAGCAGTGATGTCAGCCTTGATGAACAGT...ATCAATCACCAGAAGCAGACACCCGTGGTGGTGATTGGCTGGTTGCCTTAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR GCA 90 bp | CTGAACAGCACCAAAATGCTCCTGAATCCCAATCTTATGCAGATCTTGGCTGAGGCTGCCCGGAGGGTTTaGTGGCAGCACTGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNSTKMLLNPNLMQILAEAARRV*WQHCGS Trigger: GGAGCCACAGTGCTGCCAGCAAACCCTCCGGGCAGC...CTCAGCCAAGATCTGCATAAGATTGGGATTCAGGAGCATTTTGGTGCTGTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CCA 90 bp | CAGCCGCAGGGTAGGCACAAAAACCTTCCTCCTTGTCCCTGCTCAGCAACTGCCGTCTCATCTCTGCCTTaGACCTGTAGTAGCTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPQGRHKNLPPCPCSATAVSSLP*TCSSLG Trigger: TCCTAAGCTACTACAGGTCCAAGGCAGAGATGAGAC...GGCAGTTGCTGAGCAGGGACAAGGAGGAAGGTTTTTGTGCCTACCCTGCGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR TCA 90 bp | TATGACCCTCAACCAAGGGTGGGTTGCACAAGGGCTACATTTCTGAACAGGAAATGGCTGTGGCGAGGTTaGTGGTACCTCGGCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YDPQPRVGCTRATFLNRKWLWRG*WYLGRC Trigger: ACACCTGCCGAGGTACCATCAACCTCGCCACAGCCA...TTTCCTGTTCAGAAATGTAGCCCTTGTGCAACCCACCCTTGGTTGAGGGTCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR TCA 90 bp | CAAAAAGTACACAAGGAAGGCACCTCAATTTATGACCCTCAACCAAGGGTGGGTGCTGTCACCCAGCGCTaGCGCTCTACTTCGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKVHKEGTSIYDPQPRVGAVTQR*RSTSEL Trigger: CAGCTCCGAAGTAGAGCGTCAGCGCTGGGTGACAGC...ACCCACCCTTGGTTGAGGGTCATAAATTGAGGTGCCTTCCTTGTGTACTTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR TCA 90 bp | GAAGGCACCTCAATTTATGACCCTCAACCAAGGGTGGGTTGCACAAGGGCTACACACTGCTGGCCCCACTaGTATTGCTGCCAGTACGTT | + |
|
Preference number: 4 (lower is better) Translates to: EGTSIYDPQPRVGCTRATHCWPH*YCCQYV Trigger: AACGTACTGGCAGCAATATCAGTGGGGCCAGCAGTG...TGTAGCCCTTGTGCAACCCACCCTTGGTTGAGGGTCATAAATTGAGGTGCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR GCA 90 bp | GGGCATCTACTACGTCGATTTCAGCGTCAATCAGCTAAGGCAACCAGCCAATCAAGCTTAGGAGCCCGTTaGTCAGCACGAACCATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GHLLRRFQRQSAKATSQSSLGAR*SARTIA Trigger: GGCGATGGTTCGTGCTGAGCAACGGGCTCCTAAGCT...TGATTGGCTGGTTGCCTTAGCTGATTGACGCTGAAATCGACGTAGTAGATGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR GCA 90 bp | GACCCTCAACCAAGGGTGGGTTGCACAAGGGCTACATTTCTGAACAGGAAACTATCACTGAGGGAACGCTaGAGGGCGGTGCCATGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: DPQPRVGCTRATFLNRKLSLRER*RAVPCL Trigger: TAAGCATGGCACCGCCCTGCAGCGTTCCCTCAGTGA...TAGTTTCCTGTTCAGAAATGTAGCCCTTGTGCAACCCACCCTTGGTTGAGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CCA 90 bp | AGAAATCACCCTCTTGACTTTCTACCCGTACGCCTCCTAGGGAAGGAAACTGAGGTTCGCAGGGTGCTCTaGAGCTCGGTCTTGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RNHPLDFLPVRLLGKETEVRRVL*SSVLSV Trigger: GACTGACAAGACCGAGCTCCAGAGCACCCTGCGAAC...CTCAGTTTCCTTCCCTAGGAGGCGTACGGGTAGAAAGTCAAGAGGGTGATTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CCA 90 bp | CACTCGGTAAGAGTCCCAACTGCCAGCCTTCCCGCACATCCTCTGCCGTCTTCTTCCAGTCGGATTCGCTaGTCTCTTTCATACTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSVRVPTASLPAHPLPSSSSRIR*SLSYCS Trigger: ACTACAGTATGAAAGAGACCAGCGAATCCGACTGGA...AGAAGACGGCAGAGGATGTGCGGGAAGGCTGGCAGTTGGGACTCTTACCGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CCA 90 bp | TCCAGACTGTGGCACAAACTCAAAATGGTACTGTGCCAGGAAACAGAAGCCAGATTTTCCATGAGTCTCTaGTCGGGCCGCAGCCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRLWHKLKMVLCQETEARFSMSL*SGRSRL Trigger: CAGCCGGCTGCGGCCCGACCAGAGACTCATGGAAAA...TCTGGCTTCTGTTTCCTGGCACAGTACCATTTTGAGTTTGTGCCACAGTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CCA 90 bp | AAAAAGACCAGGACTTCCTTTCCAAGAGCCACGTGTGATCGGCAAAGCCGAGCTGCATCTTCACAGCCTTaGCCTTGGCCAGTTCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKTRTSFPRATCDRQSRAASSQP*PWPVLR Trigger: CCTTAGAACTGGCCAAGGCCAAGGCTGTGAAGATGC...AGCTCGGCTTTGCCGATCACACGTGGCTCTTGGAAAGGAAGTCCTGGTCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CCA 90 bp | AATCACCCTCTTGACTTTCTACCCGTACGCCTCCTAGGGAAGGAAACTGAGGCACTGTCTTCTGCTTCATaGCCTCTCTGCCGAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NHPLDFLPVRLLGKETEALSSAS*PLCRAS Trigger: TGATGCTCGGCAGAGAGGCCATGAAGCAGAAGACAG...TGCCTCAGTTTCCTTCCCTAGGAGGCGTACGGGTAGAAAGTCAAGAGGGTGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR TCA 90 bp | TCCAGACTGTGGCACAAACTCAAAATGGTACTGTGCCAGGAAACAGAAGCCAGAAAGGCTCTCTCCAGGTaGTTGTGCTGCTTTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRLWHKLKMVLCQETEARKALSR*LCCFAS Trigger: GCTGGCAAAGCAGCACAATCACCTGGAGAGAGCCTT...TCTGGCTTCTGTTTCCTGGCACAGTACCATTTTGAGTTTGTGCCACAGTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR TCA 90 bp | CAGCTAAGGCAACCAGCCAATCACCACCACGGGTGTCTGCTTCTGGTGATTGATTTGGTCTCCTCCAGCTaGTGCTTGTACTGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QLRQPANHHHGCLLLVIDLVSSS*CLYCSS Trigger: TGATGAACAGTACAAGCATCAGCTGGAGGAGACCAA...ATCAATCACCAGAAGCAGACACCCGTGGTGGTGATTGGCTGGTTGCCTTAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR TCA 90 bp | GGGCATCTACTACGTCGATTTCAGCGTCAATCAGCTAAGGCAACCAGCCAATCACCCAGGAGGGCAAAGTaGACTTTTCCTGATGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHLLRRFQRQSAKATSQSPRRAK*TFPDGS Trigger: AGACCCATCAGGAAAAGTTCACTTTGCCCTCCTGGG...TGATTGGCTGGTTGCCTTAGCTGATTGACGCTGAAATCGACGTAGTAGATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR GCA 90 bp | GAAAGGCAACGAAAGACGGATGAGGAGGGACTGGGAAGGTACAAGTGGCTAGCAATTCTCCCCGGAGGCTaGCTGTACTTTGAAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: ERQRKTDEEGLGRYKWLAILPGG*LYFETI Trigger: GATTGTTTCAAAGTACAGGCAGCCTCCGGGGAGAAT...TGCTAGCCACTTGTACCTTCCCAGTCCCTCCTCATCCGTCTTTCGTTGCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR GCA 90 bp | GAAGGCACCTCAATTTATGACCCTCAACCAAGGGTGGGTTGCACAAGGGCTACACCGCTCAAACCACAGTaGTTTATAGGGGTCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGTSIYDPQPRVGCTRATPLKPQ*FIGVMW Trigger: CCACATGACCCCTATAAAGCACTGTGGTTTGAGCGG...TGTAGCCCTTGTGCAACCCACCCTTGGTTGAGGGTCATAAATTGAGGTGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CCA 90 bp | GGGCATCTACTACGTCGATTTCAGCGTCAATCAGCTAAGGCAACCAGCCAATCATTTTTGGATTCAGCATaGTGCGCAGCAGCAGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHLLRRFQRQSAKATSQSFLDSA*CAAAGG Trigger: TCCCCCTGCTGCTGCGCACCATGCTGAATCCAAAAA...TGATTGGCTGGTTGCCTTAGCTGATTGACGCTGAAATCGACGTAGTAGATGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR TCA 90 bp | CTGAACAGCACCAAAATGCTCCTGAATCCCAATCTTATGCAGATCTTGGCTGAGAAGAGTCCTCCACAGTaGTGTTGGCTGTGGCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LNSTKMLLNPNLMQILAEKSPPQ*CWLWRG Trigger: ACCTCGCCACAGCCAACATCACTGTGGAGGACTCTT...CTCAGCCAAGATCTGCATAAGATTGGGATTCAGGAGCATTTTGGTGCTGTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR TCA 90 bp | GAAAGGCAACGAAAGACGGATGAGGAGGGACTGGGAAGGTACAAGTGGCTAGCAAAAGTGAACTTTTCCTaGTGGGTCTGTCACTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: ERQRKTDEEGLGRYKWLAKVNFS*WVCHFT Trigger: GGTGAAGTGACAGACCCATCAGGAAAAGTTCACTTT...TGCTAGCCACTTGTACCTTCCCAGTCCCTCCTCATCCGTCTTTCGTTGCCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR GCA 90 bp | GGGAATCAAGCTAGAAATGTAGTGCAGATAGAGGGAAAGGGGAAAGCACAGAGGTGCAGGGCGGTGCCATaGTTAGCTATCAAGTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GNQARNVVQIEGKGKAQRCRAVP*LAIKSL Trigger: CAACGACTTGATAGCTAAGCATGGCACCGCCCTGCA...CCTCTGTGCTTTCCCCTTTCCCTCTATCTGCACTACATTTCTAGCTTGATTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR GCA 90 bp | AGAAATCACCCTCTTGACTTTCTACCCGTACGCCTCCTAGGGAAGGAAACTGAGTTCTCCTCCAGGCGCTaGTTCTCAGCATTTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNHPLDFLPVRLLGKETEFSSRR*FSAFAS Trigger: TGAAGCAAATGCTGAGAAGCAGCGCCTGGAGGAGAA...CTCAGTTTCCTTCCCTAGGAGGCGTACGGGTAGAAAGTCAAGAGGGTGATTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CCA 90 bp | CTCCTTGTCCCTGCTCAGCAACTGCCACACATGACCCTGCTTGGGGTTGCAATGTTCTTACTGTGTGTCTaGGCTAACATGAGGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLVPAQQLPHMTLLGVAMFLLCV*ANMRKS Trigger: AGATTTCCTCATGTTAGCCCAGACACACAGTAAGAA...CATTGCAACCCCAAGCAGGGTCATGTGTGGCAGTTGCTGAGCAGGGACAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR TCA 90 bp | AGAAATCACCCTCTTGACTTTCTACCCGTACGCCTCCTAGGGAAGGAAACTGAGGTAATGGTGCCCAGTTaGGTGGAAAATGCAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RNHPLDFLPVRLLGKETEVMVPS*VENAVD Trigger: ATCCACTGCATTTTCCACTCAACTGGGCACCATTAC...CTCAGTTTCCTTCCCTAGGAGGCGTACGGGTAGAAAGTCAAGAGGGTGATTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR GCA 90 bp | AATCACCCTCTTGACTTTCTACCCGTACGCCTCCTAGGGAAGGAAACTGAGGCAACCTGTCACCTTTCTTaGTACATCCCGAGAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NHPLDFLPVRLLGKETEATCHLS*YIPREV Trigger: TACTTCTCTCGGGATGTAGCAAGAAAGGTGACAGGT...TGCCTCAGTTTCCTTCCCTAGGAGGCGTACGGGTAGAAAGTCAAGAGGGTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CCA 90 bp | AGAAATCACCCTCTTGACTTTCTACCCGTACGCCTCCTAGGGAAGGAAACTGAGATGTCCAGCCATTTTTaGATTCAGCATGGTGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RNHPLDFLPVRLLGKETEMSSHF*IQHGAQ Trigger: CTGCGCACCATGCTGAATCCAAAAATGGCTGGACAT...CTCAGTTTCCTTCCCTAGGAGGCGTACGGGTAGAAAGTCAAGAGGGTGATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CCA 90 bp | AATCACCCTCTTGACTTTCTACCCGTACGCCTCCTAGGGAAGGAAACTGAGGCATGGTGCCCAGTTGAGTaGAAAATGCAGTGGATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NHPLDFLPVRLLGKETEAWCPVE*KMQWIV Trigger: TACTATCCACTGCATTTTCCACTCAACTGGGCACCA...TGCCTCAGTTTCCTTCCCTAGGAGGCGTACGGGTAGAAAGTCAAGAGGGTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR GCA 90 bp | AATCACCCTCTTGACTTTCTACCCGTACGCCTCCTAGGGAAGGAAACTGAGGCATACTGTAGTGACTTCTaGCACTTCTTACTGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NHPLDFLPVRLLGKETEAYCSDF*HFLLCV Trigger: GACACACAGTAAGAAGTGGCAGAAGTCACTACAGTA...TGCCTCAGTTTCCTTCCCTAGGAGGCGTACGGGTAGAAAGTCAAGAGGGTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR GCA 90 bp | CTGAACAGCACCAAAATGCTCCTGAATCCCAATCTTATGCAGATCTTGGCTGAGCGCTCATGTCCCCTTTaGCAGAACAGCACTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNSTKMLLNPNLMQILAERSCPL*QNSTDL Trigger: AAGATCAGTGCTGTTCTGGCAAAGGGGACATGAGCG...CTCAGCCAAGATCTGCATAAGATTGGGATTCAGGAGCATTTTGGTGCTGTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CCA 90 bp | GAAGGCACCTCAATTTATGACCCTCAACCAAGGGTGGGTTGCACAAGGGCTACAAAAGTTTACCGGCATTaGGATCTTAGAGAGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGTSIYDPQPRVGCTRATKVYRH*DLRELL Trigger: AAGGAGCTCTCTAAGATCCCAATGCCGGTAAACTTT...TGTAGCCCTTGTGCAACCCACCCTTGGTTGAGGGTCATAAATTGAGGTGCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CCA 90 bp | GAAGGCACCTCAATTTATGACCCTCAACCAAGGGTGGGTTGCACAAGGGCTACACTGTCTAACAGCTCATaGTACTCCAGATCTTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EGTSIYDPQPRVGCTRATLSNSS*YSRSSV Trigger: TACTGAAGATCTGGAGTACCATGAGCTGTTAGACAG...TGTAGCCCTTGTGCAACCCACCCTTGGTTGAGGGTCATAAATTGAGGTGCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CCA 90 bp | GCACAAACTCAAAATGGTACTGTGCCAGGAAACAGAAGCCAGAAAGGCAACGAATCACCTGCTCACAGATaGACCGATACCCATTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AQTQNGTVPGNRSQKGNESPAHR*TDTHSP Trigger: AGGAGAATGGGTATCGGTCCATCTGTGAGCAGGTGA...TTCGTTGCCTTTCTGGCTTCTGTTTCCTGGCACAGTACCATTTTGAGTTTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR TCA 90 bp | AAAAAGACCAGGACTTCCTTTCCAAGAGCCACGTGTGATCGGCAAAGCCGAGCTAATCTCTGCAAGCATTaGTCATGGCATTGGATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KKTRTSFPRATCDRQSRANLCKH*SWHWML Trigger: TAACATCCAATGCCATGATCAATGCTTGCAGAGATT...AGCTCGGCTTTGCCGATCACACGTGGCTCTTGGAAAGGAAGTCCTGGTCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR TCA 90 bp | CTGAACAGCACCAAAATGCTCCTGAATCCCAATCTTATGCAGATCTTGGCTGAGGTGTCTGGGCTAACATaGGGAAATCTCTGCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LNSTKMLLNPNLMQILAEVSGLT*GNLCKH Trigger: ATGCTTGCAGAGATTTCCTCATGTTAGCCCAGACAC...CTCAGCCAAGATCTGCATAAGATTGGGATTCAGGAGCATTTTGGTGCTGTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| 3UTR CAA 72 bp | AGCGCTCTTAGCTCTCATCCTTGGAAGGAAACGTTTTaGGGATTTAGCCTGAGCTGGGACATAAGGAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SALSSHPWKETF*GFSLSWDIRKL Trigger: TAGCTTCCTTATGTCCCAGCTCAGGCTAAATCCCAAAAACGTTTCCTTCCAAGGATGAGAGCTAAGAGCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR TCA 90 bp | GACCCTCAACCAAGGGTGGGTTGCACAAGGGCTACATTTCTGAACAGGAAACTAGTGATTTTAATTTCCTaGCGCAATGTCCAGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: DPQPRVGCTRATFLNRKLVILIS*RNVQPF Trigger: AAATGGCTGGACATTGCGTCAGGAAATTAAAATCAC...TAGTTTCCTGTTCAGAAATGTAGCCCTTGTGCAACCCACCCTTGGTTGAGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR GCA 90 bp | CTGAACAGCACCAAAATGCTCCTGAATCCCAATCTTATGCAGATCTTGGCTGAGGCTCGTTCATTGACCTaGTTGATTTTCTCATTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNSTKMLLNPNLMQILAEARSLT*LIFSLL Trigger: GAGCAATGAGAAAATCAAGCAGGTCAATGAACGAGC...CTCAGCCAAGATCTGCATAAGATTGGGATTCAGGAGCATTTTGGTGCTGTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CCA 90 bp | GCACAAACTCAAAATGGTACTGTGCCAGGAAACAGAAGCCAGAAAGGCAACGAAGTTGAGGCTGTAGTTTaGCTTATATGGTATTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AQTQNGTVPGNRSQKGNEVEAVV*LIWYSG Trigger: ACCAGAATACCATATAAGCCAAACTACAGCCTCAAC...TTCGTTGCCTTTCTGGCTTCTGTTTCCTGGCACAGTACCATTTTGAGTTTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS GCA 90 bp | TGTCCCCTTTGCCAGAACAGCACTGATCTTTACCAGACCCAGCGCTaGCCGGAGGGTTTGCTGGCAGCACTGTGGCTCCCCGGAAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CPLCQNSTDLYQTQR*PEGLLAALWLPGRL Trigger: GAGCCTTCCGGGGAGCCACAGTGCTGCCAGCAAACCCTCCGGGCAGCGCTGGGTCTGGTAAAGATCAGTGCTGTTCTGGCAAAGGGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS CCA 90 bp | CTTTACCAGACCCAGCGCTGCCCGGAGGGTTTGCTGGCAGCACTGTaGCTCCCCGGAAGGCTCTCTCCAGGTGATTGTGCTGCTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LYQTQRCPEGLLAAL*LPGRLSPGDCAALP Trigger: TGGCAAAGCAGCACAATCACCTGGAGAGAGCCTTCCGGGGAGCCACAGTGCTGCCAGCAAACCCTCCGGGCAGCGCTGGGTCTGGTAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS CCA 90 bp | ACAGCACTGATCTTTACCAGACCCAGCGCTGCCCGGAGGGTTTGCTaGCAGCACTGTGGCTCCCCGGAAGGCTCTCTCCAGGTGATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TALIFTRPSAARRVC*QHCGSPEGSLQVIV Trigger: CACAATCACCTGGAGAGAGCCTTCCGGGGAGCCACAGTGCTGCCAGCAAACCCTCCGGGCAGCGCTGGGTCTGGTAAAGATCAGTGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CAA 90 bp | TCCCAACTGCCAGCCTTCCCGCACATCCTCTGCCGTCTTCTCCGATCAGCCCTCTCCCCAAGGAGAGGGTaGAATGGCTTGCTGGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SQLPAFPHILCRLLRSALSPRRG*NGLLVR Trigger: CCGAACCAGCAAGCCATTCAACCCTCTCCTTGGGGA...GAGGGCTGATCGGAGAAGACGGCAGAGGATGTGCGGGAAGGCTGGCAGTTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS GCA 90 bp | AGAACAGCACTGATCTTTACCAGACCCAGCGCTGCCCGGAGGGTTTaGTGGCAGCACTGTGGCTCCCCGGAAGGCTCTCTCCAGGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: RTALIFTRPSAARRV*WQHCGSPEGSLQVI Trigger: AATCACCTGGAGAGAGCCTTCCGGGGAGCCACAGTGCTGCCAGCAAACCCTCCGGGCAGCGCTGGGTCTGGTAAAGATCAGTGCTGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS CCA 90 bp | AATGGGTTCCTCTTCCACAGCATGACCCTGCTGTCTTCTGCTTCATaGCCTCTCTGCCGAGCATCACCCCCATTCTCCCCGGAGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: NGFLFHSMTLLSSAS*PLCRASPPFSPEAA Trigger: GGCAGCCTCCGGGGAGAATGGGGGTGATGCTCGGCAGAGAGGCCATGAAGCAGAAGACAGCAGGGTCATGCTGTGGAAGAGGAACCCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CAA 90 bp | CACTCGGTAAGAGTCCCAACTGCCAGCCTTCCCGCACATCCTCTGCCGTCTTCTTCCTCCACAGTGATGTaGGCTGTGGCGAGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: HSVRVPTASLPAHPLPSSSSTVM*AVARLM Trigger: CATCAACCTCGCCACAGCCAACATCACTGTGGAGGA...AGAAGACGGCAGAGGATGTGCGGGAAGGCTGGCAGTTGGGACTCTTACCGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CAA 90 bp | CTCCTTGTCCCTGCTCAGCAACTGCCACACATGACCCTGCTTGGGGTTGCAATGGCTGCTTCTCAGCATTaGCTTCATCCCAACGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LLVPAQQLPHMTLLGVAMAASQH*LHPNAR Trigger: ACGGGCGTTGGGATGAAGCAAATGCTGAGAAGCAGC...CATTGCAACCCCAAGCAGGGTCATGTGTGGCAGTTGCTGAGCAGGGACAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS CCA 90 bp | GTGCTGAGGTCCTCCACTTTGCTGGAGAGTGTTCGCAGGGTGCTCTaGAGCTCGGTCTTGTCAGTCTGTGAGACAGACTCTTCATCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VLRSSTLLESVRRVL*SSVLSVCETDSSSP Trigger: AGGAGATGAAGAGTCTGTCTCACAGACTGACAAGACCGAGCTCCAGAGCACCCTGCGAACACTCTCCAGCAAAGTGGAGGACCTCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR CAA 90 bp | AATCACCCTCTTGACTTTCTACCCGTACGCCTCCTAGGGAAGGAAACTGAGGCATTGGCTGTGGCGAGGTaGATGGTACCTCGGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NHPLDFLPVRLLGKETEALAVAR*MVPRQV Trigger: CACCTGCCGAGGTACCATCAACCTCGCCACAGCCAA...TGCCTCAGTTTCCTTCCCTAGGAGGCGTACGGGTAGAAAGTCAAGAGGGTGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CAA 90 bp | CACTCGGTAAGAGTCCCAACTGCCAGCCTTCCCGCACATCCTCTGCCGTCTTCTTGCTTGATTTTCTCATaGCTCTCAGCAGGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSVRVPTASLPAHPLPSSCLIFS*LSAGSF Trigger: GAAGCTGCCTGCTGAGAGCAATGAGAAAATCAAGCA...AGAAGACGGCAGAGGATGTGCGGGAAGGCTGGCAGTTGGGACTCTTACCGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGAAAGGCAACGAAAGACGGATGAGGAGGGACTGGGAAGGTACAAGTGGCTGGCCCCACTGATATaGCTGCCAGTACGTTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KPERQRKTDEEGLGRYKWLAPLI*LPVRLW Trigger: CCACAAACGTACTGGCAGCAATATCAGTGGGGCCAG...CCACTTGTACCTTCCCAGTCCCTCCTCATCCGTCTTTCGTTGCCTTTCTGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CAA 90 bp | AAAAAGACCAGGACTTCCTTTCCAAGAGCCACGTGTGATCGGCAAAGCCGAGCTCCACCTTCCCAGGCATaGAGAGTGAGGGCAAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KKTRTSFPRATCDRQSRAPPSQA*RVRASS Trigger: AGAGCTTGCCCTCACTCTCAATGCCTGGGAAGGTGG...AGCTCGGCTTTGCCGATCACACGTGGCTCTTGGAAAGGAAGTCCTGGTCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGAAAGGCAACGAAAGACGGATGAGGAGGGACTGGGAAGGTACAAGTGGAGAGGGTTGAATGGCTaGCTGGTTCGGAAGACGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KPERQRKTDEEGLGRYKWRGLNG*LVRKTV Trigger: TACCGTCTTCCGAACCAGCAAGCCATTCAACCCTCT...CCACTTGTACCTTCCCAGTCCCTCCTCATCCGTCTTTCGTTGCCTTTCTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CAA 90 bp | CCCACCCTGCCTGTGTTTGCAGAGGTTCTCCACCTGAGGGAGTCCATAAAACCCTGTAATGGTGCCCAGTaGAGTGGAAAATGCAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PTLPVFAEVLHLRESIKPCNGAQ*SGKCSG Trigger: TCCACTGCATTTTCCACTCAACTGGGCACCATTACA...GGGTTTTATGGACTCCCTCAGGTGGAGAACCTCTGCAAACACAGGCAGGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS TCA 90 bp | ACATGTTCTCTGCATTCTTCGGTAATGGGTTCCTCTTCCACAGCATaGCCCTGCTGTCTTCTGCTTCATGGCCTCTCTGCCGAGCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: TCSLHSSVMGSSSTA*PCCLLLHGLSAEHH Trigger: GTGATGCTCGGCAGAGAGGCCATGAAGCAGAAGACAGCAGGGTCATGCTGTGGAAGAGGAACCCATTACCGAAGAATGCAGAGAACATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CAA 90 bp | TCCAGACTGTGGCACAAACTCAAAATGGTACTGTGCCAGGAAACAGAAGCCAGACTGAGGTCCTCCACTTaGCTGGAGAGTGTTCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRLWHKLKMVLCQETEARLRSST*LESVRR Trigger: CCTGCGAACACTCTCCAGCAAAGTGGAGGACCTCAG...TCTGGCTTCTGTTTCCTGGCACAGTACCATTTTGAGTTTGTGCCACAGTCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CAA 90 bp | TCCAGACTGTGGCACAAACTCAAAATGGTACTGTGCCAGGAAACAGAAGCCAGACTCTGGAGCTCGGTCTaGTCAGTCTGTGAGACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SRLWHKLKMVLCQETEARLWSSV*SVCETD Trigger: GTCTGTCTCACAGACTGACAAGACCGAGCTCCAGAG...TCTGGCTTCTGTTTCCTGGCACAGTACCATTTTGAGTTTGTGCCACAGTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CAA 90 bp | GAAGGCACCTCAATTTATGACCCTCAACCAAGGGTGGGTTGCACAAGGGCTACATTGCTGCCAGTACGTTaGTGGCCCAAATTTTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EGTSIYDPQPRVGCTRATLLPVR*WPKFSG Trigger: GCCTGAAAATTTGGGCCACAAACGTACTGGCAGCAA...TGTAGCCCTTGTGCAACCCACCCTTGGTTGAGGGTCATAAATTGAGGTGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CAA 90 bp | CAGCTAAGGCAACCAGCCAATCACCACCACGGGTGTCTGCTTCTGGTGATTGATGAGAGTTCTCACACTTaGCAGCTCTGTCTAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QLRQPANHHHGCLLLVIDESSHT*QLCLTA Trigger: AGCTGTTAGACAGAGCTGCAAAGTGTGAGAACTCTC...ATCAATCACCAGAAGCAGACACCCGTGGTGGTGATTGGCTGGTTGCCTTAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CAA 90 bp | TCCAGACTGTGGCACAAACTCAAAATGGTACTGTGCCAGGAAACAGAAGCCAGAAGCATCTTCACAGCCTaGGCCTTGGCCAGTTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRLWHKLKMVLCQETEARSIFTA*ALASSK Trigger: CTTAGAACTGGCCAAGGCCAAGGCTGTGAAGATGCT...TCTGGCTTCTGTTTCCTGGCACAGTACCATTTTGAGTTTGTGCCACAGTCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR CAA 90 bp | CAAAAAGTACACAAGGAAGGCACCTCAATTTATGACCCTCAACCAAGGGTGGGTTTAGCTATCAAGTCGTaGCACGTGCTGAGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QKVHKEGTSIYDPQPRVGLAIKS*HVLRSS Trigger: GGAGGACCTCAGCACGTGCAACGACTTGATAGCTAA...ACCCACCCTTGGTTGAGGGTCATAAATTGAGGTGCCTTCCTTGTGTACTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CAA 90 bp | TCCAGACTGTGGCACAAACTCAAAATGGTACTGTGCCAGGAAACAGAAGCCAGATTGGAGATGATGAAGTaGCAAGAGTCCTCCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRLWHKLKMVLCQETEARLEMMK*QESSTV Trigger: CACTGTGGAGGACTCTTGCAACTTCATCATCTCCAA...TCTGGCTTCTGTTTCCTGGCACAGTACCATTTTGAGTTTGTGCCACAGTCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS-3UTR CAA 90 bp | GGGCATCTACTACGTCGATTTCAGCGTCAATCAGCTAAGGCAACCAGCCAATCAATAATGGAGAGGTATTaGCCTCGAAACTTGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GHLLRRFQRQSAKATSQSIMERY*PRNLLV Trigger: CACCAGCAAGTTTCGAGGCAAATACCTCTCCATTAT...TGATTGGCTGGTTGCCTTAGCTGATTGACGCTGAAATCGACGTAGTAGATGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR CAA 90 bp | GCACAAACTCAAAATGGTACTGTGCCAGGAAACAGAAGCCAGAAAGGCAACGAACACCTGTCACCTTTCTaGCTACATCCCGAGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AQTQNGTVPGNRSQKGNEHLSPF*LHPERS Trigger: ACTTCTCTCGGGATGTAGCAAGAAAGGTGACAGGTG...TTCGTTGCCTTTCTGGCTTCTGTTTCCTGGCACAGTACCATTTTGAGTTTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS GCA 90 bp | TCTTCCAGTCGGATTCGCTGGTCTCTTTCATACTGTAGTGACTTCTaGCACTTCTTACTGTGTGTCTGGGCTAACATGAGGAAATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSRIRWSLSYCSDF*HFLLCVWANMRKSL Trigger: CAGAGATTTCCTCATGTTAGCCCAGACACACAGTAAGAAGTGGCAGAAGTCACTACAGTATGAAAGAGACCAGCGAATCCGACTGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR CAA 90 bp | CTGAACAGCACCAAAATGCTCCTGAATCCCAATCTTATGCAGATCTTGGCTGAGAGCGTGGCTCGTTCATaGACCTGCTTGATTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LNSTKMLLNPNLMQILAESVARS*TCLIFS Trigger: TGAGAAAATCAAGCAGGTCAATGAACGAGCCACGCT...CTCAGCCAAGATCTGCATAAGATTGGGATTCAGGAGCATTTTGGTGCTGTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR CAA 90 bp | CTGAACAGCACCAAAATGCTCCTGAATCCCAATCTTATGCAGATCTTGGCTGAGAATGTCCAGCCATTTTaGGATTCAGCATGGTGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LNSTKMLLNPNLMQILAENVQPF*DSAWCA Trigger: TGCGCACCATGCTGAATCCAAAAATGGCTGGACATT...CTCAGCCAAGATCTGCATAAGATTGGGATTCAGGAGCATTTTGGTGCTGTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR CAA 90 bp | CAGCTAAGGCAACCAGCCAATCACCACCACGGGTGTCTGCTTCTGGTGATTGATTATTTGCCTCGAAACTaGCTGGTGATTTTAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QLRQPANHHHGCLLLVIDYLPRN*LVILIS Trigger: GGAAATTAAAATCACCAGCAAGTTTCGAGGCAAATA...ATCAATCACCAGAAGCAGACACCCGTGGTGGTGATTGGCTGGTTGCCTTAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS TCA 90 bp | ATGGAGAGGTATTTGCCTCGAAACTTGCTGGTGATTTTAATTTCCTaGCGCAATGTCCAGCCATTTTTGGATTCAGCATGGTGCGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: MERYLPRNLLVILIS*RNVQPFLDSAWCAA Trigger: TGCTGCGCACCATGCTGAATCCAAAAATGGCTGGACATTGCGTCAGGAAATTAAAATCACCAGCAAGTTTCGAGGCAAATACCTCTCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR CAA 90 bp | AGAAATCACCCTCTTGACTTTCTACCCGTACGCCTCCTAGGGAAGGAAACTGAGTTGCCCACAATAATGTaGTGTACTGTTGTGGTAACT | + |
|
Preference number: 5 (lower is better) Translates to: RNHPLDFLPVRLLGKETELPTIM*CTVVVT Trigger: AGTTACCACAACAGTACACAACATTATTGTGGGCAA...CTCAGTTTCCTTCCCTAGGAGGCGTACGGGTAGAAAGTCAAGAGGGTGATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR CAA 90 bp | CAAAAAGTACACAAGGAAGGCACCTCAATTTATGACCCTCAACCAAGGGTGGGTCGTTCATTGACCTGCTaGATTTTCTCATTGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QKVHKEGTSIYDPQPRVGRSLTC*IFSLLS Trigger: TGAGAGCAATGAGAAAATCAAGCAGGTCAATGAACG...ACCCACCCTTGGTTGAGGGTCATAAATTGAGGTGCCTTCCTTGTGTACTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR CAA 90 bp | GGGAATCAAGCTAGAAATGTAGTGCAGATAGAGGGAAAGGGGAAAGCACAGAGGGCATTGATCATGGCATaGGATGTTATCCTAAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GNQARNVVQIEGKGKAQRALIMA*DVILKS Trigger: GCTTTTTAGGATAACATCCAATGCCATGATCAATGC...CCTCTGTGCTTTCCCCTTTCCCTCTATCTGCACTACATTTCTAGCTTGATTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS-3UTR CAA 90 bp | TATGACCCTCAACCAAGGGTGGGTTGCACAAGGGCTACATTTCTGAACAGGAAAAAATCTCTGCAAGCATaGATCATGGCATTGGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: YDPQPRVGCTRATFLNRKKSLQA*IMALDV Trigger: AACATCCAATGCCATGATCAATGCTTGCAGAGATTT...TTTCCTGTTCAGAAATGTAGCCCTTGTGCAACCCACCCTTGGTTGAGGGTCATA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS CCA 90 bp | TCTCTTTCATACTGTAGTGACTTCTGCCACTTCTTACTGTGTGTCTaGGCTAACATGAGGAAATCTCTGCAAGCATTGATCATGGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSYCSDFCHFLLCV*ANMRKSLQALIMAL Trigger: CAATGCCATGATCAATGCTTGCAGAGATTTCCTCATGTTAGCCCAGACACACAGTAAGAAGTGGCAGAAGTCACTACAGTATGAAAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS CCA 72 bp | ACCCAGCGCTGCCCGGAGGGTTTGCTGGCAGCACTGTaGCTCCCCGGAAGGCTCTCTCCAGGTGATTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TQRCPEGLLAAL*LPGRLSPGDCA Trigger: AGCACAATCACCTGGAGAGAGCCTTCCGGGGAGCCACAGTGCTGCCAGCAAACCCTCCGGGCAGCGCTGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS GCA 72 bp | CTGATCTTTACCAGACCCAGCGCTGCCCGGAGGGTTTaGTGGCAGCACTGTGGCTCCCCGGAAGGCTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LIFTRPSAARRV*WQHCGSPEGSL Trigger: GAGAGAGCCTTCCGGGGAGCCACAGTGCTGCCAGCAAACCCTCCGGGCAGCGCTGGGTCTGGTAAAGATCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS CCA 72 bp | ATCTTTACCAGACCCAGCGCTGCCCGGAGGGTTTGCTaGCAGCACTGTGGCTCCCCGGAAGGCTCTCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: IFTRPSAARRVC*QHCGSPEGSLQ Trigger: CTGGAGAGAGCCTTCCGGGGAGCCACAGTGCTGCCAGCAAACCCTCCGGGCAGCGCTGGGTCTGGTAAAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS CAA 72 bp | ACTGATCTTTACCAGACCCAGCGCTGCCCGGAGGGTTaGCTGGCAGCACTGTGGCTCCCCGGAAGGCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TDLYQTQRCPEG*LAALWLPGRLS Trigger: AGAGAGCCTTCCGGGGAGCCACAGTGCTGCCAGCAAACCCTCCGGGCAGCGCTGGGTCTGGTAAAGATCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS CAA 90 bp | CAGAACAGCACTGATCTTTACCAGACCCAGCGCTGCCCGGAGGGTTaGCTGGCAGCACTGTGGCTCCCCGGAAGGCTCTCTCCAGGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: QNSTDLYQTQRCPEG*LAALWLPGRLSPGD Trigger: ATCACCTGGAGAGAGCCTTCCGGGGAGCCACAGTGCTGCCAGCAAACCCTCCGGGCAGCGCTGGGTCTGGTAAAGATCAGTGCTGTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS CCA 72 bp | AGGCTGTCACCCAGCGCTGACGCTCTACTTCGGAGCTaGCCTTCAAGTGGTAGGTCTGAGCACCGCCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: RLSPSADALLRS*PSSGRSEHRHW Trigger: CCAATGGCGGTGCTCAGACCTACCACTTGAAGGCCAGCTCCGAAGTAGAGCGTCAGCGCTGGGTGACAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS CAA 72 bp | GCTATCAAGTCGTTGCACGTGCTGAGGTCCTCCACTTaGCTGGAGAGTGTTCGCAGGGTGCTCTGGAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: AIKSLHVLRSST*LESVRRVLWSS Trigger: CGAGCTCCAGAGCACCCTGCGAACACTCTCCAGCAAAGTGGAGGACCTCAGCACGTGCAACGACTTGATAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS GCA 72 bp | TGGGTTCCTCTTCCACAGCATGACCCTGCTGTCTTCTaGTTCATGGCCTCTCTGCCGAGCATCACCCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: WVPLPQHDPAVF*FMASLPSITPI Trigger: AATGGGGGTGATGCTCGGCAGAGAGGCCATGAAGCAGAAGACAGCAGGGTCATGCTGTGGAAGAGGAACCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS TCA 72 bp | TCTTCATCGCTCATGTCCCCTTTGCCAGAACAGCACTaGTCTTTACCAGACCCAGCGCTGCCCGGAGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSSLMSPLPEQH*SLPDPALPGGF Trigger: AAACCCTCCGGGCAGCGCTGGGTCTGGTAAAGATCAGTGCTGTTCTGGCAAAGGGGACATGAGCGATGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS CCA 72 bp | TCCTCCACTTTGCTGGAGAGTGTTCGCAGGGTGCTCTaGAGCTCGGTCTTGTCAGTCTGTGAGACAGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSTLLESVRRVL*SSVLSVCETDS Trigger: AGAGTCTGTCTCACAGACTGACAAGACCGAGCTCCAGAGCACCCTGCGAACACTCTCCAGCAAAGTGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS CAA 72 bp | CTGGAGAGTGTTCGCAGGGTGCTCTGGAGCTCGGTCTaGTCAGTCTGTGAGACAGACTCTTCATCTCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LESVRRVLWSSV*SVCETDSSSPE Trigger: CTCAGGAGATGAAGAGTCTGTCTCACAGACTGACAAGACCGAGCTCCAGAGCACCCTGCGAACACTCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS GCA 72 bp | CCTGGTGACAGGGTCCTTCTTCCGCTCAAACCACAGTaGTTTATAGGGGTCATGTGGTGTGCCATCTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PGDRVLLPLKPQ*FIGVMWCAIFR Trigger: ACGGAAGATGGCACACCACATGACCCCTATAAAGCACTGTGGTTTGAGCGGAAGAAGGACCCTGTCACCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS CCA 72 bp | CTTCCGCTCAAACCACAGTGCTTTATAGGGGTCATGTaGTGTGCCATCTTCCGTGGCTTTCGCAGCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPLKPQCFIGVM*CAIFRGFRSFC Trigger: GCAGAAGCTGCGAAAGCCACGGAAGATGGCACACCACATGACCCCTATAAAGCACTGTGGTTTGAGCGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS GCA 72 bp | GCTCAAACCACAGTGCTTTATAGGGGTCATGTGGTGTaGCATCTTCCGTGGCTTTCGCAGCTTCTGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: AQTTVLYRGHVV*HLPWLSQLLLL Trigger: GAGAAGCAGAAGCTGCGAAAGCCACGGAAGATGGCACACCACATGACCCCTATAAAGCACTGTGGTTTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS CAA 90 bp | TCCACTTTGCTGGAGAGTGTTCGCAGGGTGCTCTGGAGCTCGGTCTaGTCAGTCTGTGAGACAGACTCTTCATCTCCTGAGTCATCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: STLLESVRRVLWSSV*SVCETDSSSPESSD Trigger: ATCAGATGACTCAGGAGATGAAGAGTCTGTCTCACAGACTGACAAGACCGAGCTCCAGAGCACCCTGCGAACACTCTCCAGCAAAGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS TCA 72 bp | ATCCCATGTCCCCAGGAGGGCAAAGTGAACTTTTCCTaGTGGGTCTGTCACTTCACCTGTCACCTTTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: IPCPQEGKVNFS*WVCHFTCHLSC Trigger: GCAAGAAAGGTGACAGGTGAAGTGACAGACCCATCAGGAAAAGTTCACTTTGCCCTCCTGGGGACATGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
||
| CDS CAA 72 bp | TCATCAAGGCTGACATCACTGCTGGCCCCACTGATATaGCTGCCAGTACGTTTGTGGCCCAAATTTTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRLTSLLAPLI*LPVRLWPKFSG Trigger: GCCTGAAAATTTGGGCCACAAACGTACTGGCAGCAATATCAGTGGGGCCAGCAGTGATGTCAGCCTTGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS CAA 72 bp | GTTATCCTAAAAAGCGTGGCTCGTTCATTGACCTGCTaGATTTTCTCATTGCTCTCAGCAGGCAGCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VILKSVARSLTC*IFSLLSAGSFR Trigger: CCTGAAGCTGCCTGCTGAGAGCAATGAGAAAATCAAGCAGGTCAATGAACGAGCCACGCTTTTTAGGATAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS GCA 72 bp | GATGTTATCCTAAAAAGCGTGGCTCGTTCATTGACCTaGTTGATTTTCTCATTGCTCTCAGCAGGCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: DVILKSVARSLT*LIFSLLSAGSF Trigger: GAAGCTGCCTGCTGAGAGCAATGAGAAAATCAAGCAGGTCAATGAACGAGCCACGCTTTTTAGGATAACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS CAA 72 bp | CAACATAGCAGAGCTGTTCTAGAGAGTTCTCACACTTaGCAGCTCTGTCTAACAGCTCATGGTACTCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: QHSRAVLESSHT*QLCLTAHGTPD Trigger: ATCTGGAGTACCATGAGCTGTTAGACAGAGCTGCAAAGTGTGAGAACTCTCTAGAACAGCTCTGCTATGTTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS CCA 72 bp | TACTGTAGTGACTTCTGCCACTTCTTACTGTGTGTCTaGGCTAACATGAGGAAATCTCTGCAAGCATTGATC | + |
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Preference number: 6 (lower is better) Translates to: YCSDFCHFLLCV*ANMRKSLQALI Trigger: GATCAATGCTTGCAGAGATTTCCTCATGTTAGCCCAGACACACAGTAAGAAGTGGCAGAAGTCACTACAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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| CDS CAA 72 bp | AACATGAGGAAATCTCTGCAAGCATTGATCATGGCATaGGATGTTATCCTAAAAAGCGTGGCTCGTTCATTG | + |
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Preference number: 6 (lower is better) Translates to: NMRKSLQALIMA*DVILKSVARSL Trigger: CAATGAACGAGCCACGCTTTTTAGGATAACATCCAATGCCATGATCAATGCTTGCAGAGATTTCCTCATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025590.11 |
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