Pregenerated sensors for OS9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040462Ensembl transcript IDs: ENSMUST00000080975.6, ENSMUST00000164259.9, ENSMUST00000218798.2
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCGCTCCATGCCAGCCTTAACCTCAGAGCGGAGGCGCTCGCGGTTTaGGGGCAGCAACATCCCCTCCAGCTCCTTCTCGAACTCTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: PLHASLNLRAEALAV*GQQHPLQLLLELSQ Trigger: CTGGGAGAGTTCGAGAAGGAGCTGGAGGGGATGTTGCTGCCCTCAAACCGCGAGCGCCTCCGCTCTGAGGTTAAGGCTGGCATGGAGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218798.2 |
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| 3UTR CCA 90 bp | ACAGCTCCTCACCCTCATGGGTCCCCACACACCCTCATACACTCTTaGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: TAPHPHGSPHTLIHS*GWAPQVQCWAPICP Trigger: AGGGCAGATTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGTGTGGGGACCCATGAGGGTGAGGAGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| 3UTR CCA 90 bp | CAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAAGGCCCCAGAATaGGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: QCWAPICPFASKAPE*GVRRQSRPVRKMQE Trigger: TTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACCCCATTCTGGGGCCTTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| 3UTR GCA 90 bp | GATAGGGAGAGGTGGGGTCGGGGACCTGCACAGCCCTGCTGTTCCTaGCACCACCACTCACAAGGTCTCATCAAGTCTCTGGGTAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: DRERWGRGPAQPCCS*HHHSQGLIKSLGRV Trigger: CACTCTACCCAGAGACTTGATGAGACCTTGTGAGTGGTGGTGGCAGGAACAGCAGGGCTGTGCAGGTCCCCGACCCCACCTCTCCCTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| 3UTR GCA 90 bp | CTCTTGATGAGTTTGTCCAGAGTGGATGTTAGAGCCAATATTGCCTaGTCCCGCTCGGACTCCTTCCTCAGCCCTTCTGGGTCCAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: LLMSLSRVDVRANIA*SRSDSFLSPSGSSS Trigger: GGAACTGGACCCAGAAGGGCTGAGGAAGGAGTCCGAGCGGGAGCAGGCAATATTGGCTCTAACATCCACTCTGGACAAACTCATCAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218798.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCAACATCCCCTCCAGCTCCTTCTCGAACTCTCCCAGGAGCTGCTGCTCCTCCCCTCTGCTTCCCTCTaGGGGGCCTCCGTGGTATCG | + |
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Preference number: 2 (lower is better) Translates to: QQHPLQLLLELSQELLLLPSASL*GASVVS Trigger: CGATACCACGGAGGCCCCCCAGAGGGAAGCAGAGGG...GAGGAGCAGCAGCTCCTGGGAGAGTTCGAGAAGGAGCTGGAGGGGATGTTGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000218798.2 |
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| 3UTR-3UTR CCA 90 bp | CGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCTCCAAGGCCCCAGAATaGGGTGTAAGGAGGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: RETAETGSRRSKGGATAPSKAPE*GVRRQS Trigger: GCTCTGCCTCCTTACACCCCATTCTGGGGCCTTGGA...GGGAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| 3UTR-3UTR CCA 90 bp | ATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTCCAAGGCCCCAGAATaGGGTGTAAGGAGGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: IHSWGWAPQVQCWAPICPSKAPE*GVRRQS Trigger: GCTCTGCCTCCTTACACCCCATTCTGGGGCCTTGGA...AGGGCAGATTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGATAGTCTGGGCTCAGAAGCACAGGTACCGGGAGACAGCAGAGACAGGAAGGGACCTGCACAGCCCTaGTGTTCCTGCCACCACCAC | + |
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Preference number: 2 (lower is better) Translates to: RDSLGSEAQVPGDSRDRKGPAQP*CSCHHH Trigger: GTGGTGGTGGCAGGAACAGCAGGGCTGTGCAGGTCC...CTTCCTGTCTCTGCTGTCTCCCGGTACCTGTGCTTCTGAGCCCAGACTATCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGATAGTCTGGGCTCAGAAGCACAGGTACCGGGAGACAGCAGAGACAGGAAGCCCCATAGGCCTGGCTaGAACAGCTCCTCACCCTCA | + |
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Preference number: 2 (lower is better) Translates to: RDSLGSEAQVPGDSRDRKPHRPG*NSSSPS Trigger: TGAGGGTGAGGAGCTGTTGCAGCCAGGCCTATGGGG...CTTCCTGTCTCTGCTGTCTCCCGGTACCTGTGCTTCTGAGCCCAGACTATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| 3UTR-3UTR CCA 90 bp | AGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCAAACAGCAACAGGGAATGGAGAGCTCCTCACCCTCATaGGTCCCCACACACCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: SRRSKGGATAPKQQQGMESSSPS*VPTHPH Trigger: ATGAGGGTGTGTGGGGACCCATGAGGGTGAGGAGCT...CTCCATTCCCTGTTGCTGTTTGGGAGCTGTTGCCCCTCCCTTGGAACGCCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| 3UTR-3UTR CCA 90 bp | TCGTCACCATCCTCCTCTTCCATAAGACCCGGGGGCTCACCATCCTTTCCCTTCCTCCCGCCTTACGCTTaGCTTCCCCTTTTCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SSPSSSSIRPGGSPSFPFLPPYA*LPLFCS Trigger: GCTGCAGAAAAGGGGAAGCCAAGCGTAAGGCGGGAG...GAAGGGAAAGGATGGTGAGCCCCCGGGTCTTATGGAAGAGGAGGATGGTGACGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000218798.2 |
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| 3UTR-3UTR CCA 90 bp | AGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCAAACAGCAACAGGGAATGGAGAAAGGAGGGTGTGTTTaGGGAGTGGACCCCATAGGC | + |
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Preference number: 2 (lower is better) Translates to: SRRSKGGATAPKQQQGMEKGGCV*GVDPIG Trigger: GCCTATGGGGTCCACTCCCCAAACACACCCTCCTTT...CTCCATTCCCTGTTGCTGTTTGGGAGCTGTTGCCCCTCCCTTGGAACGCCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCTCTTGATGAGTTTGTCCAGAGTGGATGTTAGAGCCAATATTGCCTGCTCCAACTCTCCCAGGAGCTaGTGCTCCTCCTCGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: SLLMSLSRVDVRANIACSNSPRS*CSSSSS Trigger: AGAGGACGAGGAGGAGCAGCAGCTCCTGGGAGAGTT...GGAGCAGGCAATATTGGCTCTAACATCCACTCTGGACAAACTCATCAAGAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218798.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTCTTGATGAGTTTGTCCAGAGTGGATGTTAGAGCCAATATTGCCTGCTCCTCTCTGTCTCCTGGATaGTGTTCTCCAGCTCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: SLLMSLSRVDVRANIACSSLSPG*CSPAPA Trigger: AGCGGGAGCTGGAGAACATCATCCAGGAGACAGAGA...GGAGCAGGCAATATTGGCTCTAACATCCACTCTGGACAAACTCATCAAGAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218798.2 |
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| 3UTR CCA 72 bp | CACCCTCATGGGTCCCCACACACCCTCATACACTCTTaGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: HPHGSPHTLIHS*GWAPQVQCWAP Trigger: TGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGTGTGGGGACCCATGAGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| 3UTR TCA 72 bp | GCCAGCCTTAACCTCAGAGCGGAGGCGCTCGCGGTTTaGGGGCAGCAACATCCCCTCCAGCTCCTTCTCGAA | + |
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Preference number: 3 (lower is better) Translates to: ASLNLRAEALAV*GQQHPLQLLLE Trigger: TTCGAGAAGGAGCTGGAGGGGATGTTGCTGCCCTCAAACCGCGAGCGCCTCCGCTCTGAGGTTAAGGCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218798.2 |
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| 3UTR CCA 72 bp | GCTCCAATCTGCCCTTTTGCCTCCAAGGCCCCAGAATaGGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: APICPFASKAPE*GVRRQSRPVRK Trigger: CTTCCTGACCGGCCGGCTCTGCCTCCTTACACCCCATTCTGGGGCCTTGGAGGCAAAAGGGCAGATTGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| 3UTR GCA 72 bp | AGGTGGGGTCGGGGACCTGCACAGCCCTGCTGTTCCTaGCACCACCACTCACAAGGTCTCATCAAGTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: RWGRGPAQPCCS*HHHSQGLIKSL Trigger: CAGAGACTTGATGAGACCTTGTGAGTGGTGGTGGCAGGAACAGCAGGGCTGTGCAGGTCCCCGACCCCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| 3UTR-3UTR CAA 90 bp | CTCCTCTTCCATAAGACCCGGGGGCTCACCATCCTTTCCCTTCGCCTTCGTTCCGCTCCCGCCTTACGCTaGGCTTCCCCTTTTCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: LLFHKTRGLTILSLRLRSAPALR*ASPFLQ Trigger: CTGCAGAAAAGGGGAAGCCAAGCGTAAGGCGGGAGC...GGAACGAAGGCGAAGGGAAAGGATGGTGAGCCCCCGGGTCTTATGGAAGAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000218798.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTGGCTGCAACAGCTCCTCACCCTCATGGGTCCCCACACACCCTCATACACTCTCCAATCTGCCCTTTaGCCTCCAAGGCCCCAGAAT | + |
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Preference number: 3 (lower is better) Translates to: AWLQQLLTLMGPHTPSYTLQSAL*PPRPQN Trigger: ATTCTGGGGCCTTGGAGGCAAAAGGGCAGATTGGAG...AGTGTATGAGGGTGTGTGGGGACCCATGAGGGTGAGGAGCTGTTGCAGCCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| 3UTR-3UTR CAA 90 bp | TGTTCCTGCCACCACCACTCACAAGGTCTCATCAAGTCTCTGGGTAGAGTGGGGCACCCTCATACACTCTaGGGGCTGGGCCCCTCAAGT | + |
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Preference number: 3 (lower is better) Translates to: CSCHHHSQGLIKSLGRVGHPHTL*GLGPSS Trigger: ACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTG...CCCCACTCTACCCAGAGACTTGATGAGACCTTGTGAGTGGTGGTGGCAGGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| 3UTR GCA 72 bp | AGTTTGTCCAGAGTGGATGTTAGAGCCAATATTGCCTaGTCCCGCTCGGACTCCTTCCTCAGCCCTTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SLSRVDVRANIA*SRSDSFLSPSG Trigger: CCCAGAAGGGCTGAGGAAGGAGTCCGAGCGGGAGCAGGCAATATTGGCTCTAACATCCACTCTGGACAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218798.2 |
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| 3UTR TCA 72 bp | CATCTCCAACCCTTTTTGCTGGGATTGTTTGTGAGGTaGTATGAAAGGTCTCCCATCCCCTCAGTGACAAGA | + |
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Preference number: 3 (lower is better) Translates to: HLQPFLLGLFVR*YERSPIPSVTR Trigger: TCTTGTCACTGAGGGGATGGGAGACCTTTCATATCACCTCACAAACAATCCCAGCAAAAAGGGTTGGAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR GCA 90 bp | GCCTCCAAGGCCCCAGAATGGGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGCGCCTCCTCTCTTGCTaGTGCCTGCTCCTCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: ASKAPEWGVRRQSRPVRKRLLSC*CLLLWP Trigger: GGGCCAGAGGAGCAGGCAGCAGCAAGAGAGGAGGCG...CTTCCTGACCGGCCGGCTCTGCCTCCTTACACCCCATTCTGGGGCCTTGGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR GCA 90 bp | GCCTCCAAGGCCCCAGAATGGGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGCTGCGCCTCCTCTCTTaGTGCTGCCTGCTCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: ASKAPEWGVRRQSRPVRKLRLLS*CCLLLW Trigger: CCAGAGGAGCAGGCAGCAGCAAGAGAGGAGGCGCAG...CTTCCTGACCGGCCGGCTCTGCCTCCTTACACCCCATTCTGGGGCCTTGGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR GCA 90 bp | CGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCGGCCGGAGGAGAGGATaGGGGCAGAGCCTTGACGTG | + |
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Preference number: 4 (lower is better) Translates to: RETAETGSRRSKGGATAPGRRRG*GQSLDV Trigger: CACGTCAAGGCTCTGCCCGCATCCTCTCCTCCGGCC...GGGAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR GCA 90 bp | CACACACCCTCATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCTCCTCTCTTGCTGCTaGCTGCTCCTCTGGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: HTPSYTLGAGPLKSSAGLLLSCC*LLLWPL Trigger: CAGGGGCCAGAGGAGCAGGCAGCAGCAAGAGAGGAG...GAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR GCA 90 bp | GGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGCCGCCTCCTCTCTTGCTaGTGCCTGCTCCTCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GVRRQSRPVRKMQESLEGRLLSC*CLLLWP Trigger: GGGCCAGAGGAGCAGGCAGCAGCAAGAGAGGAGGCG...GCCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR GCA 90 bp | CAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGCTGGCAGGGTGGTCTGCGCCTCCTCTCTTaGTGCTGCCTGCTCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QSRPVRKMQESLEGWQGGLRLLS*CCLLLW Trigger: CCAGAGGAGCAGGCAGCAGCAAGAGAGGAGGCGCAG...ACCACCCTGCCAGCCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR GCA 90 bp | GCCTCCAAGGCCCCAGAATGGGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGAACTCTCCCAGGAGCTaGTGCTCCTCCTCGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: ASKAPEWGVRRQSRPVRKNSPRS*CSSSSS Trigger: AGAGGACGAGGAGGAGCAGCAGCTCCTGGGAGAGTT...CTTCCTGACCGGCCGGCTCTGCCTCCTTACACCCCATTCTGGGGCCTTGGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CCA 90 bp | ACCGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCGGGAGGGCTTGGAGCTaGATCTGCTGCGGCCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: TGRQQRQEVGVPREGQQLGRAWS*ICCGLV Trigger: CACGAGGCCGCAGCAGATCCAGCTCCAAGCCCTCCC...GAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CCA 90 bp | CCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAAGGCCCCAGACCCTCTGCTTCCCTCTaGGGGGCCTCCGTGGTATCG | + |
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Preference number: 4 (lower is better) Translates to: PSSPVLGSNLPFCLQGPRPSASL*GASVVS Trigger: CGATACCACGGAGGCCCCCCAGAGGGAAGCAGAGGG...TCTGGGGCCTTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CCA 90 bp | CAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGCTGGCAGGGTGGTCAGTCAGGTCCCGATTaGGGCCTCCAGGACGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: QSRPVRKMQESLEGWQGGQSGPD*GLQDGA Trigger: AGCTCCGTCCTGGAGGCCCCAATCGGGACCTGACTG...ACCACCCTGCCAGCCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164259.9 |
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| CDS-3UTR TCA 90 bp | CAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGCTGGCAGGGTGGTGGCTCTGCCCTCCCATaGCAGGCAACGGCAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: QSRPVRKMQESLEGWQGGGSALP*QATARS Trigger: AGATCTTGCCGTTGCCTGTCATGGGAGGGCAGAGCC...ACCACCCTGCCAGCCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR TCA 90 bp | GGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGCGGCTGCAGGGCTGGGTaGCAAAGAATGGCCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GVRRQSRPVRKMQESLEGGCRAG*QRMACG Trigger: CCCACAGGCCATTCTTTGTCACCCAGCCCTGCAGCC...GCCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR TCA 90 bp | GCCTGGCTGCAACAGCTCCTCACCCTCATGGGTCCCCACACACCCTCATACACTGGCTGCAGGGCTGGGTaGCAAAGAATGGCCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: AWLQQLLTLMGPHTPSYTGCRAG*QRMACG Trigger: CCCACAGGCCATTCTTTGTCACCCAGCCCTGCAGCC...AGTGTATGAGGGTGTGTGGGGACCCATGAGGGTGAGGAGCTGTTGCAGCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR GCA 90 bp | CGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCTCCTGTTCCCCTGCCTaGGCCTCCTCTCTTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RETAETGSRRSKGGATAPSCSPA*ASSLAA Trigger: AGCAGCAAGAGAGGAGGCGCAGGCAGGGGAACAGGA...GGGAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CCA 90 bp | CGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCTGCTGCCTGCTCCTCTaGCCCCTGAAGCTTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: RETAETGSRRSKGGATAPCCLLL*PLKLPE Trigger: CTCTGGAAGCTTCAGGGGCCAGAGGAGCAGGCAGCA...GGGAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR TCA 90 bp | CCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAAGGCCCCAGAGGCTCTGCCCTCCCATaGCAGGCAACGGCAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: PSSPVLGSNLPFCLQGPRGSALP*QATARS Trigger: AGATCTTGCCGTTGCCTGTCATGGGAGGGCAGAGCC...TCTGGGGCCTTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR TCA 90 bp | GGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAAATGCGGGCAGAGCCTTaGCGTGCGAATGGTCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: GLGPSSPVLGSNLPFCLQMRAEP*RANGQY Trigger: GTACTGACCATTCGCACGTCAAGGCTCTGCCCGCAT...TTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR TCA 90 bp | CAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGCTGGCAGGGTGGTTGCTCCTCTGGCCCCTaGAGCTTCCAGAGCTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: QSRPVRKMQESLEGWQGGCSSGP*SFQSSD Trigger: ATCAGAGCTCTGGAAGCTTCAGGGGCCAGAGGAGCA...ACCACCCTGCCAGCCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR GCA 90 bp | AGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCAAACAGCAACAGGGAATGGAGGGCCGGAGGAGAGGATaGGGGCAGAGCCTTGACGTG | + |
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Preference number: 4 (lower is better) Translates to: SRRSKGGATAPKQQQGMEGRRRG*GQSLDV Trigger: CACGTCAAGGCTCTGCCCGCATCCTCTCCTCCGGCC...CTCCATTCCCTGTTGCTGTTTGGGAGCTGTTGCCCCTCCCTTGGAACGCCTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR GCA 90 bp | ACCGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCTCCTGTTCCCCTGCCTaGGCCTCCTCTCTTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TGRQQRQEVGVPREGQQLSCSPA*ASSLAA Trigger: AGCAGCAAGAGAGGAGGCGCAGGCAGGGGAACAGGA...GAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR GCA 90 bp | CCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAAGGCCCCAGATCTCCCAGGAGCTGCTaGTCCTCCTCGTCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSSPVLGSNLPFCLQGPRSPRSC*SSSSSS Trigger: GGAAGAGGACGAGGAGGAGCAGCAGCTCCTGGGAGA...TCTGGGGCCTTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | GGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGTCTCCCAGGAGCTGCTaGTCCTCCTCGTCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GCKEAEPAGQEDAGILRGSPRSC*SSSSSS Trigger: GGAAGAGGACGAGGAGGAGCAGCAGCTCCTGGGAGA...CCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | ACCGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCACAAAGAATGGCCTGTaGGGCAGCGCTGGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGRQQRQEVGVPREGQQLTKNGL*GSAGWW Trigger: CCACCAGCCAGCGCTGCCCCACAGGCCATTCTTTGT...GAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | AGAATGGGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTGGGAGGGCTTGGAGCTaGATCTGCTGCGGCCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RMGCKEAEPAGQEDAGILGRAWS*ICCGLV Trigger: CACGAGGCCGCAGCAGATCCAGCTCCAAGCCCTCCC...AAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACCCCATTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAACTCCCGCCTTACGCTTaGCTTCCCCTTTTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGPSSPVLGSNLPFCLQLPPYA*LPLFCS Trigger: GCTGCAGAAAAGGGGAAGCCAAGCGTAAGGCGGGAG...TTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTCCATAAGACCCGGGGGCTCACCATCCTTTCCCTTCGCCTTCGTTCCCTCGGCTCTGCCCTCCCATaGCAGGCAACGGCAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LFHKTRGLTILSLRLRSLGSALP*QATARS Trigger: AGATCTTGCCGTTGCCTGTCATGGGAGGGCAGAGCC...GAGGGAACGAAGGCGAAGGGAAAGGATGGTGAGCCCCCGGGTCTTATGGAAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218798.2 |
||
| CDS-3UTR TCA 90 bp | GGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGTGCTCCTCTGGCCCCTaGAGCTTCCAGAGCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GCKEAEPAGQEDAGILRGCSSGP*SFQSSD Trigger: ATCAGAGCTCTGGAAGCTTCAGGGGCCAGAGGAGCA...CCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR TCA 90 bp | CGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCTCTCTGTCTCCTGGATaGTGTTCTCCAGCTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RETAETGSRRSKGGATAPSLSPG*CSPAPA Trigger: AGCGGGAGCTGGAGAACATCATCCAGGAGACAGAGA...GGGAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | CGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCCACATTTGGACCCGTTaGCGTAGGTCTGGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RETAETGSRRSKGGATAPHIWTR*RRSGCG Trigger: ACCACAGCCAGACCTACGGCAACGGGTCCAAATGTG...GGGAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAATGTAGTCCCCAGATATaGCCGCACCCTCGTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: GLGPSSPVLGSNLPFCLQCSPQI*PHPRHT Trigger: TGTGTGACGAGGGTGCGGGCATATCTGGGGACTACA...TTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | GGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGAACTCTCCCAGGAGCTaGTGCTCCTCCTCGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GCKEAEPAGQEDAGILRGNSPRS*CSSSSS Trigger: AGAGGACGAGGAGGAGCAGCAGCTCCTGGGAGAGTT...CCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | ACCGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCACACCCGGCGGTAGTTaGTCTCCAGCTCACTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGRQQRQEVGVPREGQQLTPGGS*SPAHSV Trigger: GACAGAGTGAGCTGGAGAGCAACTACCGCCGGGTGT...GAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | GGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGCCGGACCCGGACTCTGTaGTCAGGTTCCTCCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GVRRQSRPVRKMQESLEGRTRTL*SGSSSV Trigger: TACAGAGGAGGAACCTGAGCACAGAGTCCGGGTCCG...GCCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | CGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCACCACGTCTGAAGCTTaGCTCTGCCCTCCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: RETAETGSRRSKGGATAPTTSEA*LCPPMT Trigger: TGTCATGGGAGGGCAGAGCCAAGCTTCAGACGTGGT...GGGAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGCATCATTGGGAGGGCTTaGAGCTGGATCTGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVRRQSRPVRKMQESLEGIIGRA*SWICCG Trigger: GCCGCAGCAGATCCAGCTCCAAGCCCTCCCAATGAT...GCCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGGCTGCAACAGCTCCTCACCCTCATGGGTCCCCACACACCCTCATACACTCTCCCGCCTTACGCTTaGCTTCCCCTTTTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AWLQQLLTLMGPHTPSYTLPPYA*LPLFCS Trigger: GCTGCAGAAAAGGGGAAGCCAAGCGTAAGGCGGGAG...AGTGTATGAGGGTGTGTGGGGACCCATGAGGGTGAGGAGCTGTTGCAGCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | AGAGATAGTCTGGGCTCAGAAGCACAGGTACCGGGAGACAGCAGAGACAGGAAGCCCTCTGCTTCCCTCTaGGGGGCCTCCGTGGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: RDSLGSEAQVPGDSRDRKPSASL*GASVVS Trigger: CGATACCACGGAGGCCCCCCAGAGGGAAGCAGAGGG...CTTCCTGTCTCTGCTGTCTCCCGGTACCTGTGCTTCTGAGCCCAGACTATCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR TCA 90 bp | GGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAACTTCCTTGGCTGGGCTaGCATCTTCTTTCTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGPSSPVLGSNLPFCLQLPWLG*HLLSLG Trigger: CCCCAAAGAAAGAAGATGTCAGCCCAGCCAAGGAAG...TTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR TCA 90 bp | ACCGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCTCTCTGTCTCCTGGATaGTGTTCTCCAGCTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGRQQRQEVGVPREGQQLSLSPG*CSPAPA Trigger: AGCGGGAGCTGGAGAACATCATCCAGGAGACAGAGA...GAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR TCA 90 bp | AGAGATAGTCTGGGCTCAGAAGCACAGGTACCGGGAGACAGCAGAGACAGGAAGCAGGACGGAGCTTGGTaGCTCGGACCCGGACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RDSLGSEAQVPGDSRDRKQDGAW*LGPGLC Trigger: ACAGAGTCCGGGTCCGAGTCACCAAGCTCCGTCCTG...CTTCCTGTCTCTGCTGTCTCCCGGTACCTGTGCTTCTGAGCCCAGACTATCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | GGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGTCTGAAGCTTGGCTCTaGCCTCCCATGACAGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GCKEAEPAGQEDAGILRGSEAWL*PPMTGN Trigger: GTTGCCTGTCATGGGAGGGCAGAGCCAAGCTTCAGA...CCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | GGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGCTCTGAAGCTTGGCTCTaGCCTCCCATGACAGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GVRRQSRPVRKMQESLEGSEAWL*PPMTGN Trigger: GTTGCCTGTCATGGGAGGGCAGAGCCAAGCTTCAGA...GCCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | ACCGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCACATTTGGACCCGTTaGCGTAGGTCTGGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGRQQRQEVGVPREGQQLHIWTR*RRSGCG Trigger: ACCACAGCCAGACCTACGGCAACGGGTCCAAATGTG...GAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | ATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTGTAGTCCCCAGATATaGCCGCACCCTCGTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: IHSWGWAPQVQCWAPICPCSPQI*PHPRHT Trigger: TGTGTGACGAGGGTGCGGGCATATCTGGGGACTACA...AGGGCAGATTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTGCCACCACCACTCACAAGGTCTCATCAAGTCTCTGGGTAGAGTGGGGCTCCTCTCTTGCTGCTaGCTGCTCCTCTGGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSCHHHSQGLIKSLGRVGLLSCC*LLLWPL Trigger: CAGGGGCCAGAGGAGCAGGCAGCAGCAAGAGAGGAG...CCCCACTCTACCCAGAGACTTGATGAGACCTTGTGAGTGGTGGTGGCAGGAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CCA 90 bp | CACACACCCTCATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCTTCCTCAGCCCTTCTaGGTCCAGTTCCTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HTPSYTLGAGPLKSSAGLLPQPF*VQFLLC Trigger: ACAGAGAAGGAACTGGACCCAGAAGGGCTGAGGAAG...GAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGGCTGGCGCTCTTTATTaGCCTCTTCGGCTCCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GCKEAEPAGQEDAGILRGAGALY*PLRLPV Trigger: TACAGGGAGCCGAAGAGGCCAATAAAGAGCGCCAGC...CCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR TCA 90 bp | GGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAAGCGCTGTTTGTACTTTaGAGACACAACCACCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLGPSSPVLGSNLPFCLQALFVL*RHNHHV Trigger: GACGTGGTGGTTGTGTCTTCAAAGTACAAACAGCGC...TTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR TCA 90 bp | AGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCAAACAGCAACAGGGAATGGAGATGCGGGCAGAGCCTTaGCGTGCGAATGGTCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SRRSKGGATAPKQQQGMEMRAEP*RANGQY Trigger: GTACTGACCATTCGCACGTCAAGGCTCTGCCCGCAT...CTCCATTCCCTGTTGCTGTTTGGGAGCTGTTGCCCCTCCCTTGGAACGCCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR TCA 90 bp | ACCGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCTTCCTTGGCTGGGCTaGCATCTTCTTTCTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGRQQRQEVGVPREGQQLLPWLG*HLLSLG Trigger: CCCCAAAGAAAGAAGATGTCAGCCCAGCCAAGGAAG...GAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGCTGGCAGGGTGGTGGACTCTGGTTCTCCTaGAGCCTCTTGATGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSRPVRKMQESLEGWQGGGLWFS*SLLMSL Trigger: CAAACTCATCAAGAGGCTGCAGGAGAACCAGAGTCC...ACCACCCTGCCAGCCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | TGTTCCTGCCACCACCACTCACAAGGTCTCATCAAGTCTCTGGGTAGAGTGGGGACAAAGAATGGCCTGTaGGGCAGCGCTGGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSCHHHSQGLIKSLGRVGTKNGL*GSAGWW Trigger: CCACCAGCCAGCGCTGCCCCACAGGCCATTCTTTGT...CCCCACTCTACCCAGAGACTTGATGAGACCTTGTGAGTGGTGGTGGCAGGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGTGGCGGTCTGTGTCCTaGACTTCCTCTGTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GCKEAEPAGQEDAGILRGWRSVS*TSSVVF Trigger: GAAAACCACAGAGGAAGTCCAGGACACAGACCGCCA...CCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | ACACCCTCATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATGGCGGTCTGTGTCCTaGACTTCCTCTGTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPSYTLGAGPLKSSAGLQWRSVS*TSSVVF Trigger: GAAAACCACAGAGGAAGTCCAGGACACAGACCGCCA...TTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | AGAGATAGTCTGGGCTCAGAAGCACAGGTACCGGGAGACAGCAGAGACAGGAAGTGCTGCCTGCTCCTCTaGCCCCTGAAGCTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDSLGSEAQVPGDSRDRKCCLLL*PLKLPE Trigger: CTCTGGAAGCTTCAGGGGCCAGAGGAGCAGGCAGCA...CTTCCTGTCTCTGCTGTCTCCCGGTACCTGTGCTTCTGAGCCCAGACTATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | AGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCAAACAGCAACAGGGAATGGAGATCATTGGGAGGGCTTaGAGCTGGATCTGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRRSKGGATAPKQQQGMEIIGRA*SWICCG Trigger: GCCGCAGCAGATCCAGCTCCAAGCCCTCCCAATGAT...CTCCATTCCCTGTTGCTGTTTGGGAGCTGTTGCCCCTCCCTTGGAACGCCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAATCCTTCTCTGTCTCCTaGATGATGTTCTCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGPSSPVLGSNLPFCLQSFSVS*MMFSSS Trigger: GGAGCTGGAGAACATCATCCAGGAGACAGAGAAGGA...TTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | CGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCTCCTTCTCTGTCTCCTaGATGATGTTCTCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RETAETGSRRSKGGATAPSFSVS*MMFSSS Trigger: GGAGCTGGAGAACATCATCCAGGAGACAGAGAAGGA...GGGAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAAGGCCCCAGACTTCCTCAGCCCTTCTaGGTCCAGTTCCTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSSPVLGSNLPFCLQGPRLPQPF*VQFLLC Trigger: ACAGAGAAGGAACTGGACCCAGAAGGGCTGAGGAAG...TCTGGGGCCTTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR TCA 90 bp | ATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTGCGCTGTTTGTACTTTaGAGACACAACCACCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: IHSWGWAPQVQCWAPICPALFVL*RHNHHV Trigger: GACGTGGTGGTTGTGTCTTCAAAGTACAAACAGCGC...AGGGCAGATTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR TCA 90 bp | ACCGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCTTTCACGTTGGAAGTaGATAGCTCCAGCTGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGRQQRQEVGVPREGQQLLSRWK*IAPAGR Trigger: CCTACCAGCTGGAGCTATTCACTTCCAACGTGAAAG...GAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR TCA 90 bp | GGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGCTTTCACGTTGGAAGTaGATAGCTCCAGCTGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCKEAEPAGQEDAGILRGLSRWK*IAPAGR Trigger: CCTACCAGCTGGAGCTATTCACTTCCAACGTGAAAG...CCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | CACACACCCTCATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCTGGCTTCCCCTTTTCTaGAGCTTTCAGCTCCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HTPSYTLGAGPLKSSAGLWLPLF*SFQLLN Trigger: ATTGAGGAGCTGAAAGCTGCAGAAAAGGGGAAGCCA...GAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | ACACCCTCATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAAGGACTCTGGTTCTCCTaGAGCCTCTTGATGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPSYTLGAGPLKSSAGLQGLWFS*SLLMSL Trigger: CAAACTCATCAAGAGGCTGCAGGAGAACCAGAGTCC...TTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTGCCACCACCACTCACAAGGTCTCATCAAGTCTCTGGGTAGAGTGGGGACACCCGGCGGTAGTTaGTCTCCAGCTCACTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSCHHHSQGLIKSLGRVGTPGGS*SPAHSV Trigger: GACAGAGTGAGCTGGAGAGCAACTACCGCCGGGTGT...CCCCACTCTACCCAGAGACTTGATGAGACCTTGTGAGTGGTGGTGGCAGGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | AGAATGGGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTACCACGTCTGAAGCTTaGCTCTGCCCTCCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: RMGCKEAEPAGQEDAGILTTSEA*LCPPMT Trigger: TGTCATGGGAGGGCAGAGCCAAGCTTCAGACGTGGT...AAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACCCCATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAAAGGGGCATCTCTCATTaGGCTCAACAATTCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLGPSSPVLGSNLPFCLQRGISH*AQQFRD Trigger: ATCCCTGAATTGTTGAGCCCAATGAGAGATGCCCCT...TTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR TCA 90 bp | TCCAGGCTGCTCCCGCCTTACGCTTGGCTTCCCCTTTTCTGCAGCTTTCAGCTCGTTTCACGTTGGAAGTaGATAGCTCCAGCTGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRLLPPYAWLPLFCSFQLVSRWK*IAPAGR Trigger: CCTACCAGCTGGAGCTATTCACTTCCAACGTGAAAC...GAGCTGAAAGCTGCAGAAAAGGGGAAGCCAAGCGTAAGGCGGGAGCAGCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218798.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGGCTGCAACAGCTCCTCACCCTCATGGGTCCCCACACACCCTCATACACTACGGCAAGATCTGGATaGCATAACGCATCTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: AWLQQLLTLMGPHTPSYTTARSG*HNASHS Trigger: TGAGTGAGATGCGTTATGGCATCCAGATCTTGCCGT...AGTGTATGAGGGTGTGTGGGGACCCATGAGGGTGAGGAGCTGTTGCAGCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | ACCGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCACGGCAAGATCTGGATaGCATAACGCATCTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGRQQRQEVGVPREGQQLTARSG*HNASHS Trigger: TGAGTGAGATGCGTTATGGCATCCAGATCTTGCCGT...GAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | ACACCCTCATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATGGCTTCCCCTTTTCTaGAGCTTTCAGCTCCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TPSYTLGAGPLKSSAGLQWLPLF*SFQLLN Trigger: ATTGAGGAGCTGAAAGCTGCAGAAAAGGGGAAGCCA...TTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | ACACCCTCATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAACCTGGACTTCCTCTGTaGTTTTCTCTTCATGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPSYTLGAGPLKSSAGLQPGLPL*FSLHAA Trigger: AGCAGCATGAAGAGAAAACCACAGAGGAAGTCCAGG...TTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGCCCTGGACTTCCTCTGTaGTTTTCTCTTCATGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVRRQSRPVRKMQESLEGPGLPL*FSLHAA Trigger: AGCAGCATGAAGAGAAAACCACAGAGGAAGTCCAGG...GCCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | AGAGATAGTCTGGGCTCAGAAGCACAGGTACCGGGAGACAGCAGAGACAGGAAGGCTGGCGCTCTTTATTaGCCTCTTCGGCTCCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RDSLGSEAQVPGDSRDRKAGALY*PLRLPV Trigger: TACAGGGAGCCGAAGAGGCCAATAAAGAGCGCCAGC...CTTCCTGTCTCTGCTGTCTCCCGGTACCTGTGCTTCTGAGCCCAGACTATCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | ATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTGATCTGTTTCAGCTGTaGGTTTTCCCGGTTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: IHSWGWAPQVQCWAPICPDLFQL*VFPVHL Trigger: GAGATGAACCGGGAAAACCCACAGCTGAAACAGATC...AGGGCAGATTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164259.9 |
||
| CDS-3UTR TCA 90 bp | AGAATGGGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAAGCTTCCAGAGCTCTaGTTCCTTCTCTTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RMGCKEAEPAGQEDAGILKLPEL*FLLFLG Trigger: GCCAAGGAAGAGAAGGAATCAGAGCTCTGGAAGCTT...AAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACCCCATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | ACACCCTCATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAAGTTTTCTCTTCATGCTaGTTTGACTCAGCTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPSYTLGAGPLKSSAGLQVFSSC*FDSACL Trigger: GAGGCAAGCTGAGTCAAAGCAGCATGAAGAGAAAAC...TTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR GCA 90 bp | TCTTCCATAAGACCCGGGGGCTCACCATCCTTTCCCTTCGCCTTCGTTCCCTCTACGGCAAGATCTGGATaGCATAACGCATCTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSIRPGGSPSFPFAFVPSTARSG*HNASHS Trigger: TGAGTGAGATGCGTTATGGCATCCAGATCTTGCCGT...AGAGGGAACGAAGGCGAAGGGAAAGGATGGTGAGCCCCCGGGTCTTATGGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218798.2 |
||
| CDS-3UTR CCA 90 bp | AGAATGGGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGGGGCATCTCTCATTaGGCTCAACAATTCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RMGCKEAEPAGQEDAGILRGISH*AQQFRD Trigger: ATCCCTGAATTGTTGAGCCCAATGAGAGATGCCCCT...AAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACCCCATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTGATGAGTTTGTCCAGAGTGGATGTTAGAGCCAATATTGCCTGCTCCCGCACCACGTCTGAAGCTTaGCTCTGCCCTCCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLMSLSRVDVRANIACSRTTSEA*LCPPMT Trigger: TGTCATGGGAGGGCAGAGCCAAGCTTCAGACGTGGT...GCGGGAGCAGGCAATATTGGCTCTAACATCCACTCTGGACAAACTCATCAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218798.2 |
||
| CDS CCA 90 bp | CAGGCTGCAGGGCTGGGTGACAAAGAATGGCCTGTGGGGCAGCGCTaGCTGGTGGCCGGAGGAGAGGATGCGGGCAGAGCCTTGACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QAAGLGDKEWPVGQR*LVAGGEDAGRALTC Trigger: GCACGTCAAGGCTCTGCCCGCATCCTCTCCTCCGGCCACCAGCCAGCGCTGCCCCACAGGCCATTCTTTGTCACCCAGCCCTGCAGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | GCCTCCAAGGCCCCAGAATGGGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGCCTCCAGGACGGAGCTaGGTGACTCGGACCCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: ASKAPEWGVRRQSRPVRKPPGRS*VTRTRT Trigger: AGTCCGGGTCCGAGTCACCAAGCTCCGTCCTGGAGG...CTTCCTGACCGGCCGGCTCTGCCTCCTTACACCCCATTCTGGGGCCTTGGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164259.9 |
||
| CDS TCA 90 bp | GGCAGCGCTGGCTGGTGGCCGGAGGAGAGGATGCGGGCAGAGCCTTaGCGTGCGAATGGTCAGTACGTAGGAGCAGGAGACGGGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GSAGWWPEERMRAEP*RANGQYVGAGDGFI Trigger: GATGAACCCGTCTCCTGCTCCTACGTACTGACCATTCGCACGTCAAGGCTCTGCCCGCATCCTCTCCTCCGGCCACCAGCCAGCGCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS GCA 90 bp | CCCCCGTGTCTTCACCACCGGGAGAGCCCCACACCCGGCGGTAGTTaGTCTCCAGCTCACTCTGTCGCTGGCGCTCTTTATTGGCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PPCLHHRESPTPGGS*SPAHSVAGALYWPL Trigger: AAGAGGCCAATAAAGAGCGCCAGCGACAGAGTGAGCTGGAGAGCAACTACCGCCGGGTGTGGGGCTCTCCCGGTGGTGAAGACACGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | GCCTCCAAGGCCCCAGAATGGGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGAATCATTGGGAGGGCTaGGAGCTGGATCTGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ASKAPEWGVRRQSRPVRKNHWEG*ELDLLR Trigger: CCGCAGCAGATCCAGCTCCAAGCCCTCCCAATGATT...CTTCCTGACCGGCCGGCTCTGCCTCCTTACACCCCATTCTGGGGCCTTGGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS GCA 90 bp | CGCTGGCTGGTGGCCGGAGGAGAGGATGCGGGCAGAGCCTTGACGTaGGAATGGTCAGTACGTAGGAGCAGGAGACGGGTTCATCTACTC | + |
|
Preference number: 5 (lower is better) Translates to: RWLVAGGEDAGRALT*EWSVRRSRRRVHLL Trigger: GAGTAGATGAACCCGTCTCCTGCTCCTACGTACTGACCATTCGCACGTCAAGGCTCTGCCCGCATCCTCTCCTCCGGCCACCAGCCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | CGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCTGCTGCTTGGAAGCCTaGGCTGTTTCGTCGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RETAETGSRRSKGGATAPCCLEA*AVSSSQ Trigger: CTGGGACGACGAAACAGCCAAGGCTTCCAAGCAGCA...GGGAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGCGCTGGCGCTCTTTATaGGCCTCTTCGGCTCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GCKEAEPAGQEDAGILRGRWRSL*ASSAPC Trigger: ACAGGGAGCCGAAGAGGCCAATAAAGAGCGCCAGCG...CCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | ACACCCTCATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAACGCTGGCGCTCTTTATaGGCCTCTTCGGCTCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TPSYTLGAGPLKSSAGLQRWRSL*ASSAPC Trigger: ACAGGGAGCCGAAGAGGCCAATAAAGAGCGCCAGCG...TTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS CCA 90 bp | CTGGTGGCCGGAGGAGAGGATGCGGGCAGAGCCTTGACGTGCGAATaGTCAGTACGTAGGAGCAGGAGACGGGTTCATCTACTCGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LVAGGEDAGRALTCE*SVRRSRRRVHLLGQ Trigger: TTGACCGAGTAGATGAACCCGTCTCCTGCTCCTACGTACTGACCATTCGCACGTCAAGGCTCTGCCCGCATCCTCTCCTCCGGCCACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | GCCTCCAAGGCCCCAGAATGGGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGAAGGGGCATCTCTCATaGGGCTCAACAATTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASKAPEWGVRRQSRPVRKKGHLS*GSTIQG Trigger: TCCCTGAATTGTTGAGCCCAATGAGAGATGCCCCTT...CTTCCTGACCGGCCGGCTCTGCCTCCTTACACCCCATTCTGGGGCCTTGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | ACCGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCTGCTGCTTGGAAGCCTaGGCTGTTTCGTCGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TGRQQRQEVGVPREGQQLCCLEA*AVSSSQ Trigger: CTGGGACGACGAAACAGCCAAGGCTTCCAAGCAGCA...GAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | ACACCCTCATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAAGATGCGGGCAGAGCCTaGACGTGCGAATGGTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: TPSYTLGAGPLKSSAGLQDAGRA*TCEWSV Trigger: TACTGACCATTCGCACGTCAAGGCTCTGCCCGCATC...TTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | ACCGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCGATGCGGGCAGAGCCTaGACGTGCGAATGGTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: TGRQQRQEVGVPREGQQLDAGRA*TCEWSV Trigger: TACTGACCATTCGCACGTCAAGGCTCTGCCCGCATC...GAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | ACCGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCAATCATTGGGAGGGCTaGGAGCTGGATCTGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TGRQQRQEVGVPREGQQLNHWEG*ELDLLR Trigger: CCGCAGCAGATCCAGCTCCAAGCCCTCCCAATGATT...GAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | AGAATGGGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTGCTCCCGCCTTACGCTaGGCTTCCCCTTTTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RMGCKEAEPAGQEDAGILAPALR*ASPFLQ Trigger: CTGCAGAAAAGGGGAAGCCAAGCGTAAGGCGGGAGC...AAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACCCCATTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAACCGGGTCGCACAATCTaGATCTCAATCTTGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLGPSSPVLGSNLPFCLQPGRTI*ISILPS Trigger: GGAAGGCAAGATTGAGATCAAGATTGTGCGACCCGG...TTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164259.9 |
||
| CDS TCA 90 bp | CCTCGTCACACAGGAACCGAACTTCAGCTTCTCGGGGCTTCCCGTTaGGATCACATTTGGACCCGTTGCCGTAGGTCTGGCTGTGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRHTGTELQLLGASR*DHIWTRCRRSGCGS Trigger: GCTACCACAGCCAGACCTACGGCAACGGGTCCAAATGTGATCTCAACGGGAAGCCCCGAGAAGCTGAAGTTCGGTTCCTGTGTGACGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS CCA 90 bp | CCTCTCCAGCACTTCTGTCACCAGCCCCTCGATCTGTTTCAGCTGTaGGTTTTCCCGGTTCATCTCCAGGACAGTCAGGTCCCGATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLQHFCHQPLDLFQL*VFPVHLQDSQVPIG Trigger: CCCAATCGGGACCTGACTGTCCTGGAGATGAACCGGGAAAACCCACAGCTGAAACAGATCGAGGGGCTGGTGACAGAAGTGCTGGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAAAAGGGGCATCTCTCATaGGGCTCAACAATTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GLGPSSPVLGSNLPFCLQKGHLS*GSTIQG Trigger: TCCCTGAATTGTTGAGCCCAATGAGAGATGCCCCTT...TTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | CGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCTATGTCCACCAGTCCTaGGTCTTCAGCAAACAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RETAETGSRRSKGGATAPYVHQS*VFSKQG Trigger: CCCTTGTTTGCTGAAGACCAAGGACTGGTGGACATA...GGGAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTGCCACCACCACTCACAAGGTCTCATCAAGTCTCTGGGTAGAGTGGGGGCTCCCGCCTTACGCTaGGCTTCCCCTTTTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSCHHHSQGLIKSLGRVGAPALR*ASPFLQ Trigger: CTGCAGAAAAGGGGAAGCCAAGCGTAAGGCGGGAGC...CCCCACTCTACCCAGAGACTTGATGAGACCTTGTGAGTGGTGGTGGCAGGAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | GCCTGGCTGCAACAGCTCCTCACCCTCATGGGTCCCCACACACCCTCATACACTATGTTAGAGCCAATATaGCCTGCTCCCGCTCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: AWLQQLLTLMGPHTPSYTMLEPI*PAPART Trigger: AGTCCGAGCGGGAGCAGGCAATATTGGCTCTAACAT...AGTGTATGAGGGTGTGTGGGGACCCATGAGGGTGAGGAGCTGTTGCAGCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | CACACACCCTCATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCTTCTCCTGCAGCCTCTaGATGAGTTTGTCCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HTPSYTLGAGPLKSSAGLFSCSL*MSLSRV Trigger: CACTCTGGACAAACTCATCAAGAGGCTGCAGGAGAA...GAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS TCA 90 bp | CCTGAAGCTTCCAGAGCTCTGATTCCTTCTCTTCCTTGGCTGGGCTaGCATCTTCTTTCTTTGGGGGTGCTCCGGCAGCCTTGCTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PEASRALIPSLPWLG*HLLSLGVLRQPCSH Trigger: GTGGGAGCAAGGCTGCCGGAGCACCCCCAAAGAAAGAAGATGTCAGCCCAGCCAAGGAAGAGAAGGAATCAGAGCTCTGGAAGCTTCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS GCA 90 bp | AGCAGGAGACGGGTTCATCTACTCGGTCAATGTAGTCCCCAGATATaGCCGCACCCTCGTCACACAGGAACCGAACTTCAGCTTCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRRRVHLLGQCSPQI*PHPRHTGTELQLLG Trigger: CCCGAGAAGCTGAAGTTCGGTTCCTGTGTGACGAGGGTGCGGGCATATCTGGGGACTACATTGACCGAGTAGATGAACCCGTCTCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS CCA 90 bp | GCTCCGGCAGCCTTGCTCCCACTCCACACTTGGCGGTCTGTGTCCTaGACTTCCTCTGTGGTTTTCTCTTCATGCTGCTTTGACTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: APAALLPLHTWRSVS*TSSVVFSSCCFDSA Trigger: AGCTGAGTCAAAGCAGCATGAAGAGAAAACCACAGAGGAAGTCCAGGACACAGACCGCCAAGTGTGGAGTGGGAGCAAGGCTGCCGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS CCA 90 bp | TCTTTCTTTGGGGGTGCTCCGGCAGCCTTGCTCCCACTCCACACTTaGCGGTCTGTGTCCTGGACTTCCTCTGTGGTTTTCTCTTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SFFGGAPAALLPLHT*RSVSWTSSVVFSSC Trigger: GCATGAAGAGAAAACCACAGAGGAAGTCCAGGACACAGACCGCCAAGTGTGGAGTGGGAGCAAGGCTGCCGGAGCACCCCCAAAGAAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CAA 90 bp | CACACACCCTCATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCAGCGCTGTTTGTACTTaGAAGACACAACCACCACGT | + |
|
Preference number: 5 (lower is better) Translates to: HTPSYTLGAGPLKSSAGLSAVCT*KTQPPR Trigger: ACGTGGTGGTTGTGTCTTCAAAGTACAAACAGCGCT...GAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CAA 90 bp | ACACCCTCATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAACTCCTCTCTTTCACGTaGGAAGTGAATAGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TPSYTLGAGPLKSSAGLQLLSFT*EVNSSS Trigger: GCTGGAGCTATTCACTTCCAACGTGAAAGAGAGGAG...TTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CAA 90 bp | ACACCCTCATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATTCTCCTGCAGCCTCTaGATGAGTTTGTCCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TPSYTLGAGPLKSSAGLQFSCSL*MSLSRV Trigger: CACTCTGGACAAACTCATCAAGAGGCTGCAGGAGAA...TTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAAGGCCCCAGACCGGGTCGCACAATCTaGATCTCAATCTTGCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PSSPVLGSNLPFCLQGPRPGRTI*ISILPV Trigger: TACAGGCAAGATTGAGATCAAGATTGTGCGACCCGG...TCTGGGGCCTTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080975.6 |
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| CDS GCA 90 bp | ATCGTCTCCAGGCTGCTCCCGCCTTACGCTTGGCTTCCCCTTTTCTaGAGCTTTCAGCTCCTCAATCAGTCGAATCAAGTCTGCGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: IVSRLLPPYAWLPLF*SFQLLNQSNQVCGT Trigger: AGTCCCGCAGACTTGATTCGACTGATTGAGGAGCTGAAAGCTGCAGAAAAGGGGAAGCCAAGCGTAAGGCGGGAGCAGCCTGGAGACGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CCA 90 bp | TTTCACCTGCACGTTATTCTGAAAATCATTGGGAGGGCTTGGAGCTaGATCTGCTGCGGCCTCGTGGTTCAGGTCCTGTTCCCCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FHLHVILKIIGRAWS*ICCGLVVQVLFPCL Trigger: CAGGCAGGGGAACAGGACCTGAACCACGAGGCCGCAGCAGATCCAGCTCCAAGCCCTCCCAATGATTTTCAGAATAACGTGCAGGTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CAA 90 bp | ACCGGGAGACAGCAGAGACAGGAAGTAGGCGTTCCAAGGGAGGGGCAACAGCTCAGCGCTGTTTGTACTTaGAAGACACAACCACCACGT | + |
|
Preference number: 5 (lower is better) Translates to: TGRQQRQEVGVPREGQQLSAVCT*KTQPPR Trigger: ACGTGGTGGTTGTGTCTTCAAAGTACAAACAGCGCT...GAGCTGTTGCCCCTCCCTTGGAACGCCTACTTCCTGTCTCTGCTGTCTCCCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CAA 90 bp | AGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCAAACAGCAACAGGGAATGGAGATGTTAGAGCCAATATaGCCTGCTCCCGCTCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SRRSKGGATAPKQQQGMEMLEPI*PAPART Trigger: AGTCCGAGCGGGAGCAGGCAATATTGGCTCTAACAT...CTCCATTCCCTGTTGCTGTTTGGGAGCTGTTGCCCCTCCCTTGGAACGCCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS TCA 90 bp | TCTTGCTGCTGCCTGCTCCTCTGGCCCCTGAAGCTTCCAGAGCTCTaGTTCCTTCTCTTCCTTGGCTGGGCTGACATCTTCTTTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCCCLLLWPLKLPEL*FLLFLGWADIFFLW Trigger: CCAAAGAAAGAAGATGTCAGCCCAGCCAAGGAAGAGAAGGAATCAGAGCTCTGGAAGCTTCAGGGGCCAGAGGAGCAGGCAGCAGCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS TCA 90 bp | ATCAAGTCTGCGGGACTCCGGATGAGTTTCACCTGCACGTTATTCTaGAAATCATTGGGAGGGCTTGGAGCTGGATCTGCTGCGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: IKSAGLRMSFTCTLF*KSLGGLGAGSAAAS Trigger: CGAGGCCGCAGCAGATCCAGCTCCAAGCCCTCCCAATGATTTTCAGAATAACGTGCAGGTGAAACTCATCCGGAGTCCCGCAGACTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CCA 90 bp | TGCTCCCACTCCACACTTGGCGGTCTGTGTCCTGGACTTCCTCTGTaGTTTTCTCTTCATGCTGCTTTGACTCAGCTTGCCTCTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSHSTLGGLCPGLPL*FSLHAALTQLASGG Trigger: ACCTCCAGAGGCAAGCTGAGTCAAAGCAGCATGAAGAGAAAACCACAGAGGAAGTCCAGGACACAGACCGCCAAGTGTGGAGTGGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CCA 90 bp | GATGAGTTTCACCTGCACGTTATTCTGAAAATCATTGGGAGGGCTTaGAGCTGGATCTGCTGCGGCCTCGTGGTTCAGGTCCTGTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: DEFHLHVILKIIGRA*SWICCGLVVQVLFP Trigger: GGGGAACAGGACCTGAACCACGAGGCCGCAGCAGATCCAGCTCCAAGCCCTCCCAATGATTTTCAGAATAACGTGCAGGTGAAACTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CAA 90 bp | CTCTTCCATAAGACCCGGGGGCTCACCATCCTTTCCCTTCGCCTTCGTTCCCTCAGCGCTGTTTGTACTTaGAAGACACAACCACCACGT | + |
|
Preference number: 5 (lower is better) Translates to: LFHKTRGLTILSLRLRSLSAVCT*KTQPPR Trigger: ACGTGGTGGTTGTGTCTTCAAAGTACAAACAGCGCT...GAGGGAACGAAGGCGAAGGGAAAGGATGGTGAGCCCCCGGGTCTTATGGAAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218798.2 |
||
| CDS-3UTR CAA 90 bp | ACACCCTCATACACTCTTGGGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAAAGCCTCTTGATGAGTTaGTCCAGAGTGGATGTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TPSYTLGAGPLKSSAGLQSLLMS*SRVDVR Trigger: TCTAACATCCACTCTGGACAAACTCATCAAGAGGCT...TTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCCCAAGAGTGTATGAGGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CAA 90 bp | GGGTGTAAGGAGGCAGAGCCGGCCGGTCAGGAAGATGCAGGAATCCTTAGAGGGATCTTGATCTCAATCTaGCCTGTAGGGTGTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GCKEAEPAGQEDAGILRGILISI*PVGCGD Trigger: ATCACCACACCCTACAGGCAAGATTGAGATCAAGAT...CCCTCTAAGGATTCCTGCATCTTCCTGACCGGCCGGCTCTGCCTCCTTACACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080975.6 |
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| CDS TCA 90 bp | TTGAAGACACAACCACCACGTCTGAAGCTTGGCTCTGCCCTCCCATaGCAGGCAACGGCAAGATCTGGATGCCATAACGCATCTCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: LKTQPPRLKLGSALP*QATARSGCHNASHS Trigger: TGAGTGAGATGCGTTATGGCATCCAGATCTTGCCGTTGCCTGTCATGGGAGGGCAGAGCCAAGCTTCAGACGTGGTGGTTGTGTCTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 ENSMUST00000218798.2 |
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| CDS-3UTR CAA 90 bp | TGTTCCTGCCACCACCACTCACAAGGTCTCATCAAGTCTCTGGGTAGAGTGGGGCTCCTCTCTTTCACGTaGGAAGTGAATAGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSCHHHSQGLIKSLGRVGLLSFT*EVNSSS Trigger: GCTGGAGCTATTCACTTCCAACGTGAAAGAGAGGAG...CCCCACTCTACCCAGAGACTTGATGAGACCTTGTGAGTGGTGGTGGCAGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CAA 90 bp | TGTTCCTGCCACCACCACTCACAAGGTCTCATCAAGTCTCTGGGTAGAGTGGGGTATGTCCACCAGTCCTaGGTCTTCAGCAAACAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CSCHHHSQGLIKSLGRVGYVHQS*VFSKQG Trigger: CCCTTGTTTGCTGAAGACCAAGGACTGGTGGACATA...CCCCACTCTACCCAGAGACTTGATGAGACCTTGTGAGTGGTGGTGGCAGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CAA 90 bp | GGGCTGGGCCCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAACCCTGTACCAAGATATaGAAGAAAATCTCCTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLGPSSPVLGSNLPFCLQPCTKI*KKISLR Trigger: CCTTAAGGAGATTTTCTTCAATATCTTGGTACAGGG...TTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGGGCCCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CAA 90 bp | AGTAGGCGTTCCAAGGGAGGGGCAACAGCTCCCAAACAGCAACAGGGAATGGAGAGCCTCTTGATGAGTTaGTCCAGAGTGGATGTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SRRSKGGATAPKQQQGMESLLMS*SRVDVR Trigger: TCTAACATCCACTCTGGACAAACTCATCAAGAGGCT...CTCCATTCCCTGTTGCTGTTTGGGAGCTGTTGCCCCTCCCTTGGAACGCCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CAA 90 bp | CCCTCAAGTCCAGTGCTGGGCTCCAATCTGCCCTTTTGCCTCCAAGGCCCCAGACCCTGTACCAAGATATaGAAGAAAATCTCCTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSSPVLGSNLPFCLQGPRPCTKI*KKISLR Trigger: CCTTAAGGAGATTTTCTTCAATATCTTGGTACAGGG...TCTGGGGCCTTGGAGGCAAAAGGGCAGATTGGAGCCCAGCACTGGACTTGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS TCA 90 bp | CTTTCAGCTCCTCAATCAGTCGAATCAAGTCTGCGGGACTCCGGATaGGTTTCACCTGCACGTTATTCTGAAAATCATTGGGAGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSAPQSVESSLRDSG*VSPARYSENHWEGL Trigger: CAAGCCCTCCCAATGATTTTCAGAATAACGTGCAGGTGAAACTCATCCGGAGTCCCGCAGACTTGATTCGACTGATTGAGGAGCTGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS-3UTR CAA 90 bp | TCCTGCAGCCTCTTGATGAGTTTGTCCAGAGTGGATGTTAGAGCCAATATTGCCCGGATGAGTTTCACGTaGGAAGTGAATAGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCSLLMSLSRVDVRANIARMSFT*EVNSSS Trigger: GCTGGAGCTATTCACTTCCAACGTGAAACTCATCCG...GGCAATATTGGCTCTAACATCCACTCTGGACAAACTCATCAAGAGGCTGCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218798.2 |
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| CDS CAA 90 bp | GGGCAGCGCTGGCTGGTGGCCGGAGGAGAGGATGCGGGCAGAGCCTaGACGTGCGAATGGTCAGTACGTAGGAGCAGGAGACGGGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GQRWLVAGGEDAGRA*TCEWSVRRSRRRVH Trigger: ATGAACCCGTCTCCTGCTCCTACGTACTGACCATTCGCACGTCAAGGCTCTGCCCGCATCCTCTCCTCCGGCCACCAGCCAGCGCTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CAA 72 bp | ACAGTCAGGTCCCGATTGGGGCCTCCAGGACGGAGCTaGGTGACTCGGACCCGGACTCTGTGCTCAGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVRSRLGPPGRS*VTRTRTLCSGS Trigger: GGAACCTGAGCACAGAGTCCGGGTCCGAGTCACCAAGCTCCGTCCTGGAGGCCCCAATCGGGACCTGACTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164259.9 |
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| CDS CAA 90 bp | AGCTGTGGGTTTTCCCGGTTCATCTCCAGGACAGTCAGGTCCCGATaGGGGCCTCCAGGACGGAGCTTGGTGACTCGGACCCGGACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SCGFSRFISRTVRSR*GPPGRSLVTRTRTL Trigger: CAGAGTCCGGGTCCGAGTCACCAAGCTCCGTCCTGGAGGCCCCAATCGGGACCTGACTGTCCTGGAGATGAACCGGGAAAACCCACAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164259.9 |
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| CDS GCA 72 bp | CTTCACCACCGGGAGAGCCCCACACCCGGCGGTAGTTaGTCTCCAGCTCACTCTGTCGCTGGCGCTCTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LHHRESPTPGGS*SPAHSVAGALY Trigger: ATAAAGAGCGCCAGCGACAGAGTGAGCTGGAGAGCAACTACCGCCGGGTGTGGGGCTCTCCCGGTGGTGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS GCA 72 bp | CCAGGACGGAGCTTGGTGACTCGGACCCGGACTCTGTaGTCAGGTTCCTCCTCTGTAGGGTGTGGTGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: PGRSLVTRTRTL*SGSSSVGCGDG Trigger: CCCATCACCACACCCTACAGAGGAGGAACCTGAGCACAGAGTCCGGGTCCGAGTCACCAAGCTCCGTCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164259.9 |
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| CDS CCA 72 bp | CTGGAGGTAGGCCATGTACTCATCAGGCTGCAGGGCTaGGTGACAAAGAATGGCCTGTGGGGCAGCGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LEVGHVLIRLQG*VTKNGLWGSAG Trigger: GCCAGCGCTGCCCCACAGGCCATTCTTTGTCACCCAGCCCTGCAGCCTGATGAGTACATGGCCTACCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CAA 90 bp | ATCTCCAGGACAGTCAGGTCCCGATTGGGGCCTCCAGGACGGAGCTaGGTGACTCGGACCCGGACTCTGTGCTCAGGTTCCTCCTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: ISRTVRSRLGPPGRS*VTRTRTLCSGSSSV Trigger: TACAGAGGAGGAACCTGAGCACAGAGTCCGGGTCCGAGTCACCAAGCTCCGTCCTGGAGGCCCCAATCGGGACCTGACTGTCCTGGAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164259.9 |
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| CDS CAA 72 bp | TGGGGGTGCTCCGGCAGCCTTGCTCCCACTCCACACTaGGCGGTCTGTGTCCTGGACTTCCTCTGTGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: WGCSGSLAPTPH*AVCVLDFLCGF Trigger: AAAACCACAGAGGAAGTCCAGGACACAGACCGCCAAGTGTGGAGTGGGAGCAAGGCTGCCGGAGCACCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CAA 72 bp | TTTTCCCGGTTCATCTCCAGGACAGTCAGGTCCCGATaGGGGCCTCCAGGACGGAGCTTGGTGACTCGGACC | + |
|
Preference number: 6 (lower is better) Translates to: FSRFISRTVRSR*GPPGRSLVTRT Trigger: GGTCCGAGTCACCAAGCTCCGTCCTGGAGGCCCCAATCGGGACCTGACTGTCCTGGAGATGAACCGGGAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164259.9 |
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| CDS GCA 72 bp | TTCCTTGGCTGGGCTGACATCTTCTTTCTTTGGGGGTaGTCCGGCAGCCTTGCTCCCACTCCACACTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: FLGWADIFFLWG*SGSLAPTPHLA Trigger: CGCCAAGTGTGGAGTGGGAGCAAGGCTGCCGGAGCACCCCCAAAGAAAGAAGATGTCAGCCCAGCCAAGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CAA 90 bp | TTGGCTGGGCTGACATCTTCTTTCTTTGGGGGTGCTCCGGCAGCCTaGCTCCCACTCCACACTTGGCGGTCTGTGTCCTGGACTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LAGLTSSFFGGAPAA*LPLHTWRSVSWTSS Trigger: AGAGGAAGTCCAGGACACAGACCGCCAAGTGTGGAGTGGGAGCAAGGCTGCCGGAGCACCCCCAAAGAAAGAAGATGTCAGCCCAGCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CCA 72 bp | GGAGGAGAGGATGCGGGCAGAGCCTTGACGTGCGAATaGTCAGTACGTAGGAGCAGGAGACGGGTTCATCTA | + |
|
Preference number: 6 (lower is better) Translates to: GGEDAGRALTCE*SVRRSRRRVHL Trigger: TAGATGAACCCGTCTCCTGCTCCTACGTACTGACCATTCGCACGTCAAGGCTCTGCCCGCATCCTCTCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CAA 72 bp | CCGTGGTATCGTCTCCAGGCTGCTCCCGCCTTACGCTaGGCTTCCCCTTTTCTGCAGCTTTCAGCTCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: PWYRLQAAPALR*ASPFLQLSAPQ Trigger: TTGAGGAGCTGAAAGCTGCAGAAAAGGGGAAGCCAAGCGTAAGGCGGGAGCAGCCTGGAGACGATACCACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CAA 72 bp | TCCTCTTCCTTACCTTCAGCCCCGGGTCGCACAATCTaGATCTCAATCTTGCCTTCCGCCGTGAGCCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSLPSAPGRTI*ISILPSAVSPS Trigger: GGAGGGGCTCACGGCGGAAGGCAAGATTGAGATCAAGATTGTGCGACCCGGGGCTGAAGGTAAGGAAGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164259.9 |
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| CDS TCA 72 bp | CAACCACCACGTCTGAAGCTTGGCTCTGCCCTCCCATaGCAGGCAACGGCAAGATCTGGATGCCATAACGCA | + |
|
Preference number: 6 (lower is better) Translates to: QPPRLKLGSALP*QATARSGCHNA Trigger: TGCGTTATGGCATCCAGATCTTGCCGTTGCCTGTCATGGGAGGGCAGAGCCAAGCTTCAGACGTGGTGGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 ENSMUST00000218798.2 |
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| CDS TCA 72 bp | ACAGGAACCGAACTTCAGCTTCTCGGGGCTTCCCGTTaGGATCACATTTGGACCCGTTGCCGTAGGTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TGTELQLLGASR*DHIWTRCRRSG Trigger: GCCAGACCTACGGCAACGGGTCCAAATGTGATCTCAACGGGAAGCCCCGAGAAGCTGAAGTTCGGTTCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS CCA 72 bp | CGTGGTATCGTCTCCAGGCTGCTCCCGCCTTACGCTTaGCTTCCCCTTTTCTGCAGCTTTCAGCTCCTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: RGIVSRLLPPYA*LPLFCSFQLLN Trigger: ATTGAGGAGCTGAAAGCTGCAGAAAAGGGGAAGCCAAGCGTAAGGCGGGAGCAGCCTGGAGACGATACCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS CAA 90 bp | TTCTTTCTTTGGGGGTGCTCCGGCAGCCTTGCTCCCACTCCACACTaGGCGGTCTGTGTCCTGGACTTCCTCTGTGGTTTTCTCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: FFLWGCSGSLAPTPH*AVCVLDFLCGFLFM Trigger: CATGAAGAGAAAACCACAGAGGAAGTCCAGGACACAGACCGCCAAGTGTGGAGTGGGAGCAAGGCTGCCGGAGCACCCCCAAAGAAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS CAA 90 bp | CAGCGTGTGTCCTCTTCCTTACCTTCAGCCCCGGGTCGCACAATCTaGATCTCAATCTTGCCTGTAGGGTGTGGTGATGGGGGAGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QRVSSSLPSAPGRTI*ISILPVGCGDGGGF Trigger: AAAGCCTCCCCCATCACCACACCCTACAGGCAAGATTGAGATCAAGATTGTGCGACCCGGGGCTGAAGGTAAGGAAGAGGACACACGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080975.6 |
||
| CDS TCA 72 bp | GCTGCTTGGAAGCCTTGGCTGTTTCGTCGTCCCAGTTaGAGGAGGACTGGTAGTGGCCAAGATAGAGGACGT | + |
|
Preference number: 6 (lower is better) Translates to: AAWKPWLFRRPS*RRTGSGQDRGR Trigger: ACGTCCTCTATCTTGGCCACTACCAGTCCTCCTTCAACTGGGACGACGAAACAGCCAAGGCTTCCAAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS TCA 72 bp | TCCAGAGCTCTGATTCCTTCTCTTCCTTGGCTGGGCTaGCATCTTCTTTCTTTGGGGGTGCTCCGGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRALIPSLPWLG*HLLSLGVLRQP Trigger: AGGCTGCCGGAGCACCCCCAAAGAAAGAAGATGTCAGCCCAGCCAAGGAAGAGAAGGAATCAGAGCTCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS GCA 72 bp | CGGGTTCATCTACTCGGTCAATGTAGTCCCCAGATATaGCCGCACCCTCGTCACACAGGAACCGAACTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RVHLLGQCSPQI*PHPRHTGTELQ Trigger: CTGAAGTTCGGTTCCTGTGTGACGAGGGTGCGGGCATATCTGGGGACTACATTGACCGAGTAGATGAACCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
||
| CDS CCA 72 bp | CACCTGCACGTTATTCTGAAAATCATTGGGAGGGCTTaGAGCTGGATCTGCTGCGGCCTCGTGGTTCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: HLHVILKIIGRA*SWICCGLVVQV Trigger: GACCTGAACCACGAGGCCGCAGCAGATCCAGCTCCAAGCCCTCCCAATGATTTTCAGAATAACGTGCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CCA 72 bp | CACTTCTGTCACCAGCCCCTCGATCTGTTTCAGCTGTaGGTTTTCCCGGTTCATCTCCAGGACAGTCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: HFCHQPLDLFQL*VFPVHLQDSQV Trigger: GACCTGACTGTCCTGGAGATGAACCGGGAAAACCCACAGCTGAAACAGATCGAGGGGCTGGTGACAGAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164259.9 |
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| CDS GCA 72 bp | TTTGAAGACACAACCACCACGTCTGAAGCTTGGCTCTaGCCTCCCATGACAGGCAACGGCAAGATCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: FEDTTTTSEAWL*PPMTGNGKIWM Trigger: CATCCAGATCTTGCCGTTGCCTGTCATGGGAGGGCAGAGCCAAGCTTCAGACGTGGTGGTTGTGTCTTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 ENSMUST00000218798.2 |
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| CDS GCA 72 bp | AGGCTGCTCCCGCCTTACGCTTGGCTTCCCCTTTTCTaGAGCTTTCAGCTCCTCAATCAGTCGAATCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: RLLPPYAWLPLF*SFQLLNQSNQV Trigger: GACTTGATTCGACTGATTGAGGAGCTGAAAGCTGCAGAAAAGGGGAAGCCAAGCGTAAGGCGGGAGCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CCA 72 bp | CACGTTATTCTGAAAATCATTGGGAGGGCTTGGAGCTaGATCTGCTGCGGCCTCGTGGTTCAGGTCCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: HVILKIIGRAWS*ICCGLVVQVLF Trigger: GAACAGGACCTGAACCACGAGGCCGCAGCAGATCCAGCTCCAAGCCCTCCCAATGATTTTCAGAATAACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CAA 72 bp | TCACCTGCACGTTATTCTGAAAATCATTGGGAGGGCTaGGAGCTGGATCTGCTGCGGCCTCGTGGTTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: SPARYSENHWEG*ELDLLRPRGSG Trigger: ACCTGAACCACGAGGCCGCAGCAGATCCAGCTCCAAGCCCTCCCAATGATTTTCAGAATAACGTGCAGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CAA 72 bp | TCCTCTTCCTTACCTTCAGCCCCGGGTCGCACAATCTaGATCTCAATCTTGCCTGTAGGGTGTGGTGATGGG | + |
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Preference number: 6 (lower is better) Translates to: SSSLPSAPGRTI*ISILPVGCGDG Trigger: CCCATCACCACACCCTACAGGCAAGATTGAGATCAAGATTGTGCGACCCGGGGCTGAAGGTAAGGAAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080975.6 |
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| CDS CAA 90 bp | TGCACAAGCTCTGGACTCTGGTTCTCCTGCAGCCTCTTGATGAGTTaGTCCAGAGTGGATGTTAGAGCCAATATTGCCTGCTCCCGCTCG | + |
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Preference number: 6 (lower is better) Translates to: CTSSGLWFSCSLLMS*SRVDVRANIACSRS Trigger: CGAGCGGGAGCAGGCAATATTGGCTCTAACATCCACTCTGGACAAACTCATCAAGAGGCTGCAGGAGAACCAGAGTCCAGAGCTTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS TCA 72 bp | GCGGGACTCCGGATGAGTTTCACCTGCACGTTATTCTaGAAATCATTGGGAGGGCTTGGAGCTGGATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: AGLRMSFTCTLF*KSLGGLGAGSA Trigger: AGCAGATCCAGCTCCAAGCCCTCCCAATGATTTTCAGAATAACGTGCAGGTGAAACTCATCCGGAGTCCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CAA 72 bp | CAGCTGGTAGGCGGCACTCATAGCGCTGTTTGTACTTaGAAGACACAACCACCACGTCTGAAGCTTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: QLVGGTHSAVCT*KTQPPRLKLGS Trigger: AGAGCCAAGCTTCAGACGTGGTGGTTGTGTCTTCAAAGTACAAACAGCGCTATGAGTGCCGCCTACCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 ENSMUST00000218798.2 |
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| CDS CAA 90 bp | GGTCTGTGTCCTGGACTTCCTCTGTGGTTTTCTCTTCATGCTGCTTaGACTCAGCTTGCCTCTGGAGGTAGGCCATGTACTCATCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: GLCPGLPLWFSLHAA*TQLASGGRPCTHQA Trigger: AGCCTGATGAGTACATGGCCTACCTCCAGAGGCAAGCTGAGTCAAAGCAGCATGAAGAGAAAACCACAGAGGAAGTCCAGGACACAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS GCA 72 bp | TGCAGCTTTCAGCTCCTCAATCAGTCGAATCAAGTCTaGGGGACTCCGGATGAGTTTCACCTGCACGTTATT | + |
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Preference number: 6 (lower is better) Translates to: CSFQLLNQSNQV*GTPDEFHLHVI Trigger: AATAACGTGCAGGTGAAACTCATCCGGAGTCCCGCAGACTTGATTCGACTGATTGAGGAGCTGAAAGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CAA 72 bp | TCTGGACTCTGGTTCTCCTGCAGCCTCTTGATGAGTTaGTCCAGAGTGGATGTTAGAGCCAATATTGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SGLWFSCSLLMS*SRVDVRANIAC Trigger: GCAGGCAATATTGGCTCTAACATCCACTCTGGACAAACTCATCAAGAGGCTGCAGGAGAACCAGAGTCCAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CAA 72 bp | TGCACAAGCTCTGGACTCTGGTTCTCCTGCAGCCTCTaGATGAGTTTGTCCAGAGTGGATGTTAGAGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: CTSSGLWFSCSL*MSLSRVDVRAN Trigger: ATTGGCTCTAACATCCACTCTGGACAAACTCATCAAGAGGCTGCAGGAGAACCAGAGTCCAGAGCTTGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS TCA 72 bp | AGGACTGGTAGTGGCCAAGATAGAGGACGTCACCTTTaGTCTCCGAGTCTTCCATATGGTACTGCTGGATAT | + |
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Preference number: 6 (lower is better) Translates to: RTGSGQDRGRHL*SPSLPYGTAGY Trigger: ATATCCAGCAGTACCATATGGAAGACTCGGAGATCAAAGGTGACGTCCTCTATCTTGGCCACTACCAGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CAA 90 bp | TTGTATTTTTGCACAAGCTCTGGACTCTGGTTCTCCTGCAGCCTCTaGATGAGTTTGTCCAGAGTGGATGTTAGAGCCAATATTGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LYFCTSSGLWFSCSL*MSLSRVDVRANIAC Trigger: GCAGGCAATATTGGCTCTAACATCCACTCTGGACAAACTCATCAAGAGGCTGCAGGAGAACCAGAGTCCAGAGCTTGTGCAAAAATACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS CAA 90 bp | CGCTGGCGCTCTTTATTGGCCTCTTCGGCTCCCTGTACCAAGATATaGAAGAAAATCTCCTTAAGGTTTCTTGTATCCTCATCAGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: RWRSLLASSAPCTKI*KKISLRFLVSSSVS Trigger: GCTGACTGATGAGGATACAAGAAACCTTAAGGAGATTTTCTTCAATATCTTGGTACAGGGAGCCGAAGAGGCCAATAAAGAGCGCCAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS TCA 72 bp | CCTCAATCAGTCGAATCAAGTCTGCGGGACTCCGGATaGGTTTCACCTGCACGTTATTCTGAAAATCATTGG | + |
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Preference number: 6 (lower is better) Translates to: PQSVESSLRDSG*VSPARYSENHW Trigger: CCAATGATTTTCAGAATAACGTGCAGGTGAAACTCATCCGGAGTCCCGCAGACTTGATTCGACTGATTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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| CDS GCA 72 bp | TTGTATTTTTGCACAAGCTCTGGACTCTGGTTCTCCTaGAGCCTCTTGATGAGTTTGTCCAGAGTGGATGTT | + |
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Preference number: 6 (lower is better) Translates to: LYFCTSSGLWFS*SLLMSLSRVDV Trigger: AACATCCACTCTGGACAAACTCATCAAGAGGCTGCAGGAGAACCAGAGTCCAGAGCTTGTGCAAAAATACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080975.6 ENSMUST00000164259.9 |
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