RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ORM2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000061540

Ensembl transcript IDs: ENSMUST00000075341.4

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 72 bp TTGTGGCAGAGACAGAATCAAAGTGCACAGGAGGGGTaGGGTTTGGTGAGCCTGTGGACAGCCCTCGGAGTT +
Preference number: 3 (lower is better)
Translates to: LWQRQNQSAQEG*GLVSLWTALGV
Trigger: AACTCCGAGGGCTGTCCACAGGCTCACCAAACCCCACCCCTCCTGTGCACTTTGATTCTGTCTCTGCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
3UTR GCA 72 bp CAGCAAACCTTTATTGTGGCAGAGACAGAATCAAAGTaGACAGGAGGGGTGGGGTTTGGTGAGCCTGTGGAC +
Preference number: 3 (lower is better)
Translates to: QQTFIVAETESK*TGGVGFGEPVD
Trigger: GTCCACAGGCTCACCAAACCCCACCCCTCCTGTGCACTTTGATTCTGTCTCTGCCACAATAAAGGTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS-3UTR TCA 90 bp GCACAGGAGGGGTGGGGTTTGGTGAGCCTGTGGACAGCCCTCGGAGTTCAGAGAAGTCAAAGGCAAGCATaGAGGCCCCATGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: AQEGWGLVSLWTALGVQRSQRQA*RPHASS
Trigger: TGAAGATGCATGGGGCCTTCATGCTTGCCTTTGACT...TCTCTGAACTCCGAGGGCTGTCCACAGGCTCACCAAACCCCACCCCTCCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS-3UTR GCA 90 bp CAAAGTGCACAGGAGGGGTGGGGTTTGGTGAGCCTGTGGACAGCCCTCGGAGTTGCTTCTCCTGCTGACTaGACCTGTCCTTTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: QSAQEGWGLVSLWTALGVASPAD*TCPFSS
Trigger: ACTGGAAAAAGGACAGGTGCAGTCAGCAGGAGAAGC...AACTCCGAGGGCTGTCCACAGGCTCACCAAACCCCACCCCTCCTGTGCACTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
3UTR CAA 72 bp CAGAGACAGAATCAAAGTGCACAGGAGGGGTGGGGTTaGGTGAGCCTGTGGACAGCCCTCGGAGTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: QRQNQSAQEGWG*VSLWTALGVQR
Trigger: TCTCTGAACTCCGAGGGCTGTCCACAGGCTCACCAAACCCCACCCCTCCTGTGCACTTTGATTCTGTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS-3UTR TCA 90 bp GAGGGGTGGGGTTTGGTGAGCCTGTGGACAGCCCTCGGAGTTCAGAGAGCTGAGGACAAATATGATTTCTaGTTCATCCATGCCCACGTG +
Preference number: 4 (lower is better)
Translates to: EGWGLVSLWTALGVQRAEDKYDF*FIHAHV
Trigger: CACGTGGGCATGGATGAATCAGAAATCATATTTGTC...CTCAGCTCTCTGAACTCCGAGGGCTGTCCACAGGCTCACCAAACCCCACCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS-3UTR CCA 90 bp ACAGAATCAAAGTGCACAGGAGGGGTGGGGTTTGGTGAGCCTGTGGACAGCCCTCCTCAGGATCTTTCTTaGTCTCCTTCTCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: TESKCTGGVGFGEPVDSPPQDLS*SPSPAQ
Trigger: TTGAGCTGGAGAAGGAGACCAAGAAAGATCCTGAGG...AGGGCTGTCCACAGGCTCACCAAACCCCACCCCTCCTGTGCACTTTGATTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS-3UTR TCA 90 bp ACCTTTATTGTGGCAGAGACAGAATCAAAGTGCACAGGAGGGGTGGGGTTTGGTCCATGCCCACGTGTGTaGCAGCCTTCTGGAATACTT +
Preference number: 4 (lower is better)
Translates to: TFIVAETESKCTGGVGFGPCPRV*QPSGIL
Trigger: AAGTATTCCAGAAGGCTGTCACACACGTGGGCATGG...ACCAAACCCCACCCCTCCTGTGCACTTTGATTCTGTCTCTGCCACAATAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS-3UTR CCA 90 bp AGCAAACCTTTATTGTGGCAGAGACAGAATCAAAGTGCACAGGAGGGGTGGGGTCTCCTCCTACATACTTaGAGAGGGTCCCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: SKPLLWQRQNQSAQEGWGLLLHT*RGSHSL
Trigger: GAGAGAATGGGACCCTCTCCAAGTATGTAGGAGGAG...ACCCCACCCCTCCTGTGCACTTTGATTCTGTCTCTGCCACAATAAAGGTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS-3UTR CCA 90 bp CAAACCTTTATTGTGGCAGAGACAGAATCAAAGTGCACAGGAGGGGTGGGGTTTTGTGTGACAGCCTTCTaGAATACTTCCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QTFIVAETESKCTGGVGFCVTAF*NTSRSS
Trigger: GGAGCTGCGGGAAGTATTCCAGAAGGCTGTCACACA...AAACCCCACCCCTCCTGTGCACTTTGATTCTGTCTCTGCCACAATAAAGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS-3UTR TCA 90 bp ACTGTGTCAGCAAACCTTTATTGTGGCAGAGACAGAATCAAAGTGCACAGGAGGTGCTGCTTCTCCTGCTaGCTGCACCTGTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: TVSANLYCGRDRIKVHRRCCFSC*LHLSFF
Trigger: GAAAAAGGACAGGTGCAGTCAGCAGGAGAAGCAGCA...CCTCCTGTGCACTTTGATTCTGTCTCTGCCACAATAAAGGTTTGCTGACACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS-3UTR CCA 90 bp CCTTTATTGTGGCAGAGACAGAATCAAAGTGCACAGGAGGGGTGGGGTTTGGTGCACAGTGGTCATCTATaGTGTGATACTCTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: PLLWQRQNQSAQEGWGLVHSGHL*CDTLEA
Trigger: AGCTTCGAGAGTATCACACCATAGATGACCACTGTG...CACCAAACCCCACCCCTCCTGTGCACTTTGATTCTGTCTCTGCCACAATAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS-3UTR GCA 90 bp GACTGTGTCAGCAAACCTTTATTGTGGCAGAGACAGAATCAAAGTGCACAGGAGAGCATGAAGGCCCCATaGATCTTCAAGACTATCAGG +
Preference number: 4 (lower is better)
Translates to: DCVSKPLLWQRQNQSAQESMKAP*IFKTIR
Trigger: CCTGATAGTCTTGAAGATGCATGGGGCCTTCATGCT...CTCCTGTGCACTTTGATTCTGTCTCTGCCACAATAAAGGTTTGCTGACACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS-3UTR CCA 90 bp TGTGTCAGCAAACCTTTATTGTGGCAGAGACAGAATCAAAGTGCACAGGAGGGGGATGTTGACATGTTCTaGGTTCTGAGCTTCCAACAG +
Preference number: 4 (lower is better)
Translates to: CVSKPLLWQRQNQSAQEGDVDMF*VLSFQQ
Trigger: CTGTTGGAAGCTCAGAACCCAGAACATGTCAACATC...CCCCTCCTGTGCACTTTGATTCTGTCTCTGCCACAATAAAGGTTTGCTGACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS CCA 90 bp GGTCTCATTGGTGATAGGGTCGCCTATGGTGATGTTGACATGTTCTaGGTTCTGAGCTTCCAACAGCGGCAGGAGGCTCACCATGACAAG +
Preference number: 5 (lower is better)
Translates to: GLIGDRVAYGDVDMF*VLSFQQRQEAHHDK
Trigger: CTTGTCATGGTGAGCCTCCTGCCGCTGTTGGAAGCTCAGAACCCAGAACATGTCAACATCACCATAGGCGACCCTATCACCAATGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS TCA 90 bp TTGGTGATAGGGTCGCCTATGGTGATGTTGACATGTTCTGGGTTCTaGGCTTCCAACAGCGGCAGGAGGCTCACCATGACAAGAATCATG +
Preference number: 5 (lower is better)
Translates to: LVIGSPMVMLTCSGF*ASNSGRRLTMTRIM
Trigger: CATGATTCTTGTCATGGTGAGCCTCCTGCCGCTGTTGGAAGCTCAGAACCCAGAACATGTCAACATCACCATAGGCGACCCTATCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS-3UTR CAA 90 bp ACCTTTATTGTGGCAGAGACAGAATCAAAGTGCACAGGAGGGGTGGGGTTTGGTACTCCTCCTACATACTaGGAGAGGGTCCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: TFIVAETESKCTGGVGFGTPPTY*ERVPFS
Trigger: AGAGAATGGGACCCTCTCCAAGTATGTAGGAGGAGT...ACCAAACCCCACCCCTCCTGTGCACTTTGATTCTGTCTCTGCCACAATAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS-3UTR CAA 90 bp CAAACCTTTATTGTGGCAGAGACAGAATCAAAGTGCACAGGAGGGGTGGGGTTTTCTGGCCTTTTTGCATaGAGGGACAGTCCCCGTTTC +
Preference number: 5 (lower is better)
Translates to: QTFIVAETESKCTGGVGFSGLFA*RDSPRF
Trigger: GAAACGGGGACTGTCCCTCAATGCAAAAAGGCCAGA...AAACCCCACCCCTCCTGTGCACTTTGATTCTGTCTCTGCCACAATAAAGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS CCA 90 bp AATATGATTTCTGATTCATCCATGCCCACGTGTGTGACAGCCTTCTaGAATACTTCCCGCAGCTCCGGGGTGATATCTGGCCTTTTTGCA +
Preference number: 5 (lower is better)
Translates to: NMISDSSMPTCVTAF*NTSRSSGVISGLFA
Trigger: TGCAAAAAGGCCAGATATCACCCCGGAGCTGCGGGAAGTATTCCAGAAGGCTGTCACACACGTGGGCATGGATGAATCAGAAATCATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS TCA 90 bp GGGACAGTCCCCGTTTCTTCTCATCCTTCAAGTCAAAGGCAAGCATaGAGGCCCCATGCATCTTCAAGACTATCAGGTCTGCAAAGATTT +
Preference number: 5 (lower is better)
Translates to: GTVPVSSHPSSQRQA*RPHASSRLSGLQRF
Trigger: AAATCTTTGCAGACCTGATAGTCTTGAAGATGCATGGGGCCTTCATGCTTGCCTTTGACTTGAAGGATGAGAAGAAACGGGGACTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS TCA 90 bp CTGCTGACTGCACCTGTCCTTTTTCCAGTCGACAAATATGATTTCTaGTTCATCCATGCCCACGTGTGTGACAGCCTTCTGGAATACTTC +
Preference number: 5 (lower is better)
Translates to: LLTAPVLFPVDKYDF*FIHAHVCDSLLEYF
Trigger: GAAGTATTCCAGAAGGCTGTCACACACGTGGGCATGGATGAATCAGAAATCATATTTGTCGACTGGAAAAAGGACAGGTGCAGTCAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS GCA 90 bp AAAGGCAAGCATGAAGGCCCCATGCATCTTCAAGACTATCAGGTCTaGAAAGATTTTTACTCCTCCTACATACTTGGAGAGGGTCCCATT +
Preference number: 5 (lower is better)
Translates to: KGKHEGPMHLQDYQV*KDFYSSYILGEGPI
Trigger: AATGGGACCCTCTCCAAGTATGTAGGAGGAGTAAAAATCTTTGCAGACCTGATAGTCTTGAAGATGCATGGGGCCTTCATGCTTGCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS-3UTR CAA 90 bp TTGACTGTGTCAGCAAACCTTTATTGTGGCAGAGACAGAATCAAAGTGCACAGGCCAATGAAAAACCATTaGTCAGAGAGCCAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: LTVSANLYCGRDRIKVHRPMKNH*SESQLR
Trigger: CCTGAGCTGGCTCTCTGACAAATGGTTTTTCATTGG...CCTGTGCACTTTGATTCTGTCTCTGCCACAATAAAGGTTTGCTGACACAGTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS GCA 90 bp CGTTTCTTCTCATCCTTCAAGTCAAAGGCAAGCATGAAGGCCCCATaGATCTTCAAGACTATCAGGTCTGCAAAGATTTTTACTCCTCCT +
Preference number: 5 (lower is better)
Translates to: RFFSSFKSKASMKAP*IFKTIRSAKIFTPP
Trigger: AGGAGGAGTAAAAATCTTTGCAGACCTGATAGTCTTGAAGATGCATGGGGCCTTCATGCTTGCCTTTGACTTGAAGGATGAGAAGAAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS CCA 72 bp GGTGATAGGGTCGCCTATGGTGATGTTGACATGTTCTaGGTTCTGAGCTTCCAACAGCGGCAGGAGGCTCAC +
Preference number: 6 (lower is better)
Translates to: GDRVAYGDVDMF*VLSFQQRQEAH
Trigger: GTGAGCCTCCTGCCGCTGTTGGAAGCTCAGAACCCAGAACATGTCAACATCACCATAGGCGACCCTATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS CAA 90 bp GCACCAATGAAAAACCATTTGTCAGAGAGCCAGCTCAGGGTCTCATaGGTGATAGGGTCGCCTATGGTGATGTTGACATGTTCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: APMKNHLSESQLRVS*VIGSPMVMLTCSGF
Trigger: GAACCCAGAACATGTCAACATCACCATAGGCGACCCTATCACCAATGAGACCCTGAGCTGGCTCTCTGACAAATGGTTTTTCATTGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS TCA 72 bp CCCGTTTCTTCTCATCCTTCAAGTCAAAGGCAAGCATaGAGGCCCCATGCATCTTCAAGACTATCAGGTCTG +
Preference number: 6 (lower is better)
Translates to: PVSSHPSSQRQA*RPHASSRLSGL
Trigger: CAGACCTGATAGTCTTGAAGATGCATGGGGCCTTCATGCTTGCCTTTGACTTGAAGGATGAGAAGAAACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS CAA 72 bp AAAAACCATTTGTCAGAGAGCCAGCTCAGGGTCTCATaGGTGATAGGGTCGCCTATGGTGATGTTGACATGT +
Preference number: 6 (lower is better)
Translates to: KNHLSESQLRVS*VIGSPMVMLTC
Trigger: ACATGTCAACATCACCATAGGCGACCCTATCACCAATGAGACCCTGAGCTGGCTCTCTGACAAATGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS CCA 72 bp AGAGGGTCCCATTCTCTCTCTGGATTCCTAGATGAGTaGAGTTATAGACACAGTGGTCATCTATGGTGTGAT +
Preference number: 6 (lower is better)
Translates to: RGSHSLSGFLDE*SYRHSGHLWCD
Trigger: ATCACACCATAGATGACCACTGTGTCTATAACTCCACTCATCTAGGAATCCAGAGAGAGAATGGGACCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS GCA 72 bp CATGAAGGCCCCATGCATCTTCAAGACTATCAGGTCTaGAAAGATTTTTACTCCTCCTACATACTTGGAGAG +
Preference number: 6 (lower is better)
Translates to: HEGPMHLQDYQV*KDFYSSYILGE
Trigger: CTCTCCAAGTATGTAGGAGGAGTAAAAATCTTTGCAGACCTGATAGTCTTGAAGATGCATGGGGCCTTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4
CDS CAA 72 bp ATCAGGTCTGCAAAGATTTTTACTCCTCCTACATACTaGGAGAGGGTCCCATTCTCTCTCTGGATTCCTAGA +
Preference number: 6 (lower is better)
Translates to: IRSAKIFTPPTY*ERVPFSLWIPR
Trigger: TCTAGGAATCCAGAGAGAGAATGGGACCCTCTCCAAGTATGTAGGAGGAGTAAAAATCTTTGCAGACCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075341.4