Pregenerated sensors for ORC6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031697Ensembl transcript IDs: ENSMUST00000034132.13, ENSMUST00000170141.3, ENSMUST00000210146.2, ENSMUST00000211396.2, ENSMUST00000211597.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTaGAGTGAGATGGAAATCACTCTGCTGTGGCTGTCTGAGCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: RRLPHPSSPRQTAHA*SEMEITLLWLSELW Trigger: CCAAAGCTCAGACAGCCACAGCAGAGTGATTTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| 3UTR CCA 90 bp | CACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGAGATaGAAATCACTCTGCTGTGGCTGTCTGAGCTTTGGCAGCATTTTC | + |
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Preference number: 1 (lower is better) Translates to: HTLHLPDRLHMPAVR*KSLCCGCLSFGSIF Trigger: GAAAATGCTGCCAAAGCTCAGACAGCCACAGCAGAGTGATTTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| 3UTR TCA 90 bp | ACCCCACGTGAGAGGACAGATCTGAGTCTTCAGAGGCAATATGGTTaGTCTAATGTCCATGTGAGGTGCCCAGTGCTAGCATCCTCTGTA | + |
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Preference number: 1 (lower is better) Translates to: TPRERTDLSLQRQYG*SNVHVRCPVLASSV Trigger: TACAGAGGATGCTAGCACTGGGCACCTCACATGGACATTAGATCAACCATATTGCCTCTGAAGACTCAGATCTGTCCTCTCACGTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCAGCACACCTGGAATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCCAATTTCACCCCACGTaGGAGGACAGATCTGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: SSAHLEFRLREDFHTLHLQFHPT*EDRSES Trigger: AGACTCAGATCTGTCCTCTCACGTGGGGTGAAATTG...GAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATTCCAGGTGTGCTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGAGATGGAAATCACTCTaGTGTGGCTGTCTGAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: REDFHTLHLPDRLHMPAVRWKSL*CGCLSF Trigger: AAAGCTCAGACAGCCACAGCAGAGTGATTTCCATCT...CACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCAGCACACCTGGAATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCGTGAGAGGACAGATCTaGGTCTTCAGAGGCAATATG | + |
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Preference number: 2 (lower is better) Translates to: SSAHLEFRLREDFHTLHLVRGQI*VFRGNM Trigger: CATATTGCCTCTGAAGACTCAGATCTGTCCTCTCAC...GAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATTCCAGGTGTGCTGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGTTCTATTTCTTTTGCTaGTGGTTCAAGTCCTGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: REDFHTLHLPDRLHMPAVFYFFC*WFKSWL Trigger: GAGCCAGGACTTGAACCACCAGCAAAAGAAATAGAA...CACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCCCAGACAGACTGCACATGCCTGCAGTGAGATGGAAATCACTCTGCTGTGGTACTTCTATTTCTTTTaGTGGTGGTTCAAGTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SPRQTAHACSEMEITLLWYFYFF*WWFKSW Trigger: CCAGGACTTGAACCACCAGCAAAAGAAATAGAAGTA...CCACAGCAGAGTGATTTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCAGCACACCTGGAATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCCACATAGAAGCAAAATaGTCCCAATTTCACCCCACG | + |
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Preference number: 2 (lower is better) Translates to: SSAHLEFRLREDFHTLHLHIEAK*SQFHPT Trigger: CGTGGGGTGAAATTGGGACCATTTTGCTTCTATGTG...GAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATTCCAGGTGTGCTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTCAGCACACCTGGAATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTGTTGGACTAAACTCTaGCTTCTTTCTCTTCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: TPQHTWNSGLEKTSTPFICWTKL*LLSLQC Trigger: GCACTGAAGAGAAAGAAGCCAGAGTTTAGTCCAACA...GATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATTCCAGGTGTGCTGAGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGCTTTTTCTTCAGTGTTaGACTAAACTCTGGCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LEKTSTPFISQTDCTCLQLFLQC*TKLWLL Trigger: AAGAAGCCAGAGTTTAGTCCAACACTGAAGAAAAAG...CTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| 3UTR TCA 72 bp | GAGAGGACAGATCTGAGTCTTCAGAGGCAATATGGTTaGTCTAATGTCCATGTGAGGTGCCCAGTGCTAGCA | + |
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Preference number: 3 (lower is better) Translates to: ERTDLSLQRQYG*SNVHVRCPVLA Trigger: TGCTAGCACTGGGCACCTCACATGGACATTAGATCAACCATATTGCCTCTGAAGACTCAGATCTGTCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCCCAGACAGACTGCACATGCCTGCAGTGAGATGGAAATCACTCTGCTGTGGTTACTTCTATTTCTTTaGCTGGTGGTTCAAGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: SPRQTAHACSEMEITLLWLLLFL*LVVQVL Trigger: CAGGACTTGAACCACCAGCAAAAGAAATAGAAGTAA...CCACAGCAGAGTGATTTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| 3UTR TCA 72 bp | ATGGTCCCAATTTCACCCCACGTGAGAGGACAGATCTaGGTCTTCAGAGGCAATATGGTTGATCTAATGTCC | + |
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Preference number: 3 (lower is better) Translates to: MVPISPHVRGQI*VFRGNMVDLMS Trigger: GGACATTAGATCAACCATATTGCCTCTGAAGACTCAGATCTGTCCTCTCACGTGGGGTGAAATTGGGACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| 3UTR TCA 72 bp | CACATAGAAGCAAAATGGTCCCAATTTCACCCCACGTaGGAGGACAGATCTGAGTCTTCAGAGGCAATATGG | + |
|
Preference number: 3 (lower is better) Translates to: HIEAKWSQFHPT*EDRSESSEAIW Trigger: CCATATTGCCTCTGAAGACTCAGATCTGTCCTCTCACGTGGGGTGAAATTGGGACCATTTTGCTTCTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| 3UTR GCA 72 bp | AGGCTTAGGGATCTGGCATTCTCTTCTGGCTTCCACTaGACCAGACATACATGCAGGCAAAATACTCATACA | + |
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Preference number: 3 (lower is better) Translates to: RLRDLAFSSGFH*TRHTCRQNTHT Trigger: TGTATGAGTATTTTGCCTGCATGTATGTCTGGTGCAGTGGAAGCCAGAAGAGAATGCCAGATCCCTAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170141.3 |
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| CDS-3UTR TCA 90 bp | CTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGAGATGGAAGTAGTGCGGCAGTGGTaGAAAGTGGCCTGGACAAGT | + |
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Preference number: 4 (lower is better) Translates to: LPHPSSPRQTAHACSEMEVVRQW*KVAWTS Trigger: ACTTGTCCAGGCCACTTTTCACCACTGCCGCACTAC...TTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| CDS-3UTR TCA 90 bp | GGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGTCTGCTGTGGCTGTCTaGGCTTTGGCAGCATTTTCC | + |
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Preference number: 4 (lower is better) Translates to: GLEKTSTPFISQTDCTCLSAVAV*ALAAFS Trigger: GGAAAATGCTGCCAAAGCTCAGACAGCCACAGCAGA...CAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR TCA 90 bp | CTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGAGATGGAACAAGGTCCAGGCATATaGCAGCATTGCTGGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LPHPSSPRQTAHACSEMEQGPGI*QHCWFL Trigger: CAGAAACCAGCAATGCTGTCATATGCCTGGACCTTG...TTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000210146.2 |
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| CDS-3UTR TCA 90 bp | CTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGAGATGGAACTGCTTCTGTACAGCTaGACTGTACAGCTAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LPHPSSPRQTAHACSEMELLLYS*TVQLGL Trigger: GAGACCTAGCTGTACAGTTCAGCTGTACAGAAGCAG...TTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| CDS-3UTR TCA 90 bp | AGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGCTGCTTCTGTACAGCTaGACTGTACAGCTAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: REDFHTLHLPDRLHMPAVLLLYS*TVQLGL Trigger: GAGACCTAGCTGTACAGTTCAGCTGTACAGAAGCAG...CACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| CDS-3UTR TCA 90 bp | TCCTCTGTACTGAGACACTCCTCAGCACACCTGGAATTCAGGCTTAGAGAAGACGTAGTGCGGCAGTGGTaGAAAGTGGCCTGGACAAGT | + |
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Preference number: 4 (lower is better) Translates to: SSVLRHSSAHLEFRLREDVVRQW*KVAWTS Trigger: ACTTGTCCAGGCCACTTTTCACCACTGCCGCACTAC...GTCTTCTCTAAGCCTGAATTCCAGGTGTGCTGAGGAGTGTCTCAGTACAGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| CDS-3UTR GCA 90 bp | CCAGACAGACTGCACATGCCTGCAGTGAGATGGAAATCACTCTGCTGTGGCTGTGCTCTGCAGTATCTCTaGAGCCAAGTTCACTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PDRLHMPAVRWKSLCCGCALQYL*SQVHCF Trigger: GAAGCAGTGAACTTGGCTGCAGAGATACTGCAGAGC...ACAGCCACAGCAGAGTGATTTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| CDS-3UTR CCA 90 bp | GGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGGGCAGTGGTGAAAAGTaGCCTGGACAAGTCAAGATC | + |
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Preference number: 4 (lower is better) Translates to: GLEKTSTPFISQTDCTCLGSGEK*PGQVKI Trigger: GATCTTGACTTGTCCAGGCCACTTTTCACCACTGCC...CAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| CDS-3UTR TCA 90 bp | GAATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACTCTGCTGTGGCTGTCTaGGCTTTGGCAGCATTTTCC | + |
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Preference number: 4 (lower is better) Translates to: EFRLREDFHTLHLPDRLHSAVAV*ALAAFS Trigger: GGAAAATGCTGCCAAAGCTCAGACAGCCACAGCAGA...GTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR GCA 90 bp | TTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGAGATGGAAACTTCCTACAGGAAGCTaGAAGGTCCAGGCATATGAC | + |
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Preference number: 4 (lower is better) Translates to: FHTLHLPDRLHMPAVRWKLPTGS*KVQAYD Trigger: GTCATATGCCTGGACCTTGCAGCTTCCTGTAGGAAG...TTTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000210146.2 |
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| CDS-3UTR GCA 90 bp | TTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGAGATGGAAAGCTCTGCAGTATCTCTaGAGCCAAGTTCACTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: FHTLHLPDRLHMPAVRWKALQYL*SQVHCF Trigger: GAAGCAGTGAACTTGGCTGCAGAGATACTGCAGAGC...TTTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| CDS-3UTR TCA 90 bp | TCCTCTGTACTGAGACACTCCTCAGCACACCTGGAATTCAGGCTTAGAGAAGACCTGCTTCTGTACAGCTaGACTGTACAGCTAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SSVLRHSSAHLEFRLREDLLLYS*TVQLGL Trigger: GAGACCTAGCTGTACAGTTCAGCTGTACAGAAGCAG...GTCTTCTCTAAGCCTGAATTCCAGGTGTGCTGAGGAGTGTCTCAGTACAGAGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| CDS-3UTR GCA 90 bp | ACTCCTCAGCACACCTGGAATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCCTTCCTACAGGAAGCTaGAAGGTCCAGGCATATGAC | + |
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Preference number: 4 (lower is better) Translates to: TPQHTWNSGLEKTSTPFILPTGS*KVQAYD Trigger: GTCATATGCCTGGACCTTGCAGCTTCCTGTAGGAAG...GATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATTCCAGGTGTGCTGAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000210146.2 |
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| CDS-3UTR GCA 90 bp | CACCTGGAATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGAGCTCTGCAGTATCTCTaGAGCCAAGTTCACTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: HLEFRLREDFHTLHLPDRALQYL*SQVHCF Trigger: GAAGCAGTGAACTTGGCTGCAGAGATACTGCAGAGC...TCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATTCCAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| CDS-3UTR GCA 90 bp | AGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGCAGTCGATCAAGTATTaGCTTTTTCACACCGGATGC | + |
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Preference number: 4 (lower is better) Translates to: REDFHTLHLPDRLHMPAVQSIKY*LFHTGC Trigger: GCATCCGGTGTGAAAAAGGCAATACTTGATCGACTG...CACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR CCA 90 bp | CACCTGGAATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGAGGCAGTGGTGAAAAGTaGCCTGGACAAGTCAAGATC | + |
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Preference number: 4 (lower is better) Translates to: HLEFRLREDFHTLHLPDRGSGEK*PGQVKI Trigger: GATCTTGACTTGTCCAGGCCACTTTTCACCACTGCC...TCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATTCCAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| CDS-3UTR TCA 90 bp | CTATTTCTTTTGCTGGTGGTTCAAGTCCTGGCTCCTTTTTCTTCAGTGTTGGACGTAGTGCGGCAGTGGTaGAAAGTGGCCTGGACAAGT | + |
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Preference number: 4 (lower is better) Translates to: LFLLLVVQVLAPFSSVLDVVRQW*KVAWTS Trigger: ACTTGTCCAGGCCACTTTTCACCACTGCCGCACTAC...GTCCAACACTGAAGAAAAAGGAGCCAGGACTTGAACCACCAGCAAAAGAAATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| CDS-3UTR GCA 90 bp | AATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACAATCTGCAGAGTCTCTTaGATGCTGAGAGTAGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: NSGLEKTSTPFISQTDCTICRVS*MLRVVR Trigger: CCGCACTACTCTCAGCATGCAAGAGACTCTGCAGAT...TGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| CDS-3UTR CCA 90 bp | CTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGAGATGGAATGTTGGACTAAACTCTaGCTTCTTTCTCTTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: LPHPSSPRQTAHACSEMECWTKL*LLSLQC Trigger: GCACTGAAGAGAAAGAAGCCAGAGTTTAGTCCAACA...TTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR CCA 90 bp | CTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGAGATGGAATTCTATTTCTTTTGCTaGTGGTTCAAGTCCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LPHPSSPRQTAHACSEMEFYFFC*WFKSWL Trigger: GAGCCAGGACTTGAACCACCAGCAAAAGAAATAGAA...TTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR GCA 90 bp | GGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGTCTCTGTTAATCTGCTaGCCAATCTTTTCTAACTGC | + |
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Preference number: 4 (lower is better) Translates to: GLEKTSTPFISQTDCTCLSLLIC*PIFSNC Trigger: GCAGTTAGAAAAGATTGGGCAGCAGATTAACAGAGA...CAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR CCA 90 bp | TTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGAGATGGAAATGTTGGACTAAACTCTaGCTTCTTTCTCTTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: FHTLHLPDRLHMPAVRWKCWTKL*LLSLQC Trigger: GCACTGAAGAGAAAGAAGCCAGAGTTTAGTCCAACA...TTTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR CCA 90 bp | TTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTTCTATTTCTTTTGCTaGTGGTTCAAGTCCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LEKTSTPFISQTDCTCLQFYFFC*WFKSWL Trigger: GAGCCAGGACTTGAACCACCAGCAAAAGAAATAGAA...CTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR TCA 90 bp | CTCCTTTTTCTTCAGTGTTGGACTAAACTCTGGCTTCTTTCTCTTCAGTGCTGGCAAGGTCCAGGCATATaGCAGCATTGCTGGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LLFLQCWTKLWLLSLQCWQGPGI*QHCWFL Trigger: CAGAAACCAGCAATGCTGTCATATGCCTGGACCTTG...CCAGCACTGAAGAGAAAGAAGCCAGAGTTTAGTCCAACACTGAAGAAAAAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| CDS-3UTR TCA 90 bp | AGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGGTACAGCTAGGTCTCTaGTTCCAACATTTGAATTTA | + |
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Preference number: 4 (lower is better) Translates to: REDFHTLHLPDRLHMPAVVQLGL*FQHLNL Trigger: TAAATTCAAATGTTGGAATCAGAGACCTAGCTGTAC...CACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| CDS-3UTR GCA 90 bp | AATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACACAGTCGATCAAGTATTaGCTTTTTCACACCGGATGC | + |
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Preference number: 4 (lower is better) Translates to: NSGLEKTSTPFISQTDCTQSIKY*LFHTGC Trigger: GCATCCGGTGTGAAAAAGGCAATACTTGATCGACTG...TGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR GCA 90 bp | GGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCCAATCTTTTCTAACTaGTTACACAGTCGATCAAGT | + |
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Preference number: 4 (lower is better) Translates to: GLEKTSTPFISQTDCTCLPIFSN*LHSRSS Trigger: ACTTGATCGACTGTGTAAGCAGTTAGAAAAGATTGG...CAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR CCA 90 bp | GGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCTTTTTCTTCAGTGTTaGACTAAACTCTGGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GLEKTSTPFISQTDCTCLLFLQC*TKLWLL Trigger: AAGAAGCCAGAGTTTAGTCCAACACTGAAGAAAAAG...CAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR CCA 90 bp | TCCTCAGCACACCTGGAATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCTATTTCTTTTGCTGGTaGTTCAAGTCCTGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SSAHLEFRLREDFHTLHLYFFCW*FKSWLL Trigger: AAGGAGCCAGGACTTGAACCACCAGCAAAAGAAATA...GAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATTCCAGGTGTGCTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR CCA 90 bp | TCCTCTGTACTGAGACACTCCTCAGCACACCTGGAATTCAGGCTTAGAGAAGACTATTTCTTTTGCTGGTaGTTCAAGTCCTGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SSVLRHSSAHLEFRLREDYFFCW*FKSWLL Trigger: AAGGAGCCAGGACTTGAACCACCAGCAAAAGAAATA...GTCTTCTCTAAGCCTGAATTCCAGGTGTGCTGAGGAGTGTCTCAGTACAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR GCA 90 bp | CACCTGGAATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGATCTCTGTTAATCTGCTaGCCAATCTTTTCTAACTGC | + |
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Preference number: 4 (lower is better) Translates to: HLEFRLREDFHTLHLPDRSLLIC*PIFSNC Trigger: GCAGTTAGAAAAGATTGGGCAGCAGATTAACAGAGA...TCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATTCCAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR GCA 90 bp | TCCTCTGTACTGAGACACTCCTCAGCACACCTGGAATTCAGGCTTAGAGAAGACTACTTCTATTTCTTTTaGTGGTGGTTCAAGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSVLRHSSAHLEFRLREDYFYFF*WWFKSW Trigger: CCAGGACTTGAACCACCAGCAAAAGAAATAGAAGTA...GTCTTCTCTAAGCCTGAATTCCAGGTGTGCTGAGGAGTGTCTCAGTACAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR CCA 90 bp | TTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGAGATGGAAACTTTTTCTTCAGTGTTaGACTAAACTCTGGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FHTLHLPDRLHMPAVRWKLFLQC*TKLWLL Trigger: AAGAAGCCAGAGTTTAGTCCAACACTGAAGAAAAAG...TTTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR TCA 90 bp | GAATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACGTACAGCTAGGTCTCTaGTTCCAACATTTGAATTTA | + |
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Preference number: 4 (lower is better) Translates to: EFRLREDFHTLHLPDRLHVQLGL*FQHLNL Trigger: TAAATTCAAATGTTGGAATCAGAGACCTAGCTGTAC...GTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 |
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| CDS-3UTR GCA 90 bp | ACTCCTCAGCACACCTGGAATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTTATCTTTAGAATTTTaGATGCTGAGAGTAGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: TPQHTWNSGLEKTSTPFILSLEF*MLRVVR Trigger: CCGCACTACTCTCAGCATGCAAAATTCTAAAGATAA...GATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATTCCAGGTGTGCTGAGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR GCA 90 bp | TCCTCAGCACACCTGGAATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAATCTTTTCTAACTaGTTACACAGTCGATCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SSAHLEFRLREDFHTLHLPIFSN*LHSRSS Trigger: ACTTGATCGACTGTGTAAGCAGTTAGAAAAGATTGG...GAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATTCCAGGTGTGCTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR GCA 90 bp | AATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATACTTCTATTTCTTTTaGTGGTGGTTCAAGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSGLEKTSTPFISQTDCTYFYFF*WWFKSW Trigger: CCAGGACTTGAACCACCAGCAAAAGAAATAGAAGTA...TGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR GCA 90 bp | AATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATTATCTTTAGAATTTTaGATGCTGAGAGTAGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NSGLEKTSTPFISQTDCTLSLEF*MLRVVR Trigger: CCGCACTACTCTCAGCATGCAAAATTCTAAAGATAA...TGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR CCA 90 bp | TATTACTTCTATTTCTTTTGCTGGTGGTTCAAGTCCTGGCTCCTTTTTCTTCAGGGCAGTGGTGAAAAGTaGCCTGGACAAGTCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: YYFYFFCWWFKSWLLFLQGSGEK*PGQVKI Trigger: GATCTTGACTTGTCCAGGCCACTTTTCACCACTGCC...CTGAAGAAAAAGGAGCCAGGACTTGAACCACCAGCAAAAGAAATAGAAGTAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| CDS-3UTR TCA 90 bp | CTATTTCTTTTGCTGGTGGTTCAAGTCCTGGCTCCTTTTTCTTCAGTGTTGGACGTACAGCTAGGTCTCTaGTTCCAACATTTGAATTTA | + |
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Preference number: 4 (lower is better) Translates to: LFLLLVVQVLAPFSSVLDVQLGL*FQHLNL Trigger: TAAATTCAAATGTTGGAATCAGAGACCTAGCTGTAC...GTCCAACACTGAAGAAAAAGGAGCCAGGACTTGAACCACCAGCAAAAGAAATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| 3UTR CAA 72 bp | GTAGTTTATGAAGGGTTTCTATTACTTCTATTTCTTTaGCTGGTGGTTCAAGTCCTGGCTCCTTTTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VVYEGFLLLLFL*LVVQVLAPFSS Trigger: TGAAGAAAAAGGAGCCAGGACTTGAACCACCAGCAAAAGAAATAGAAGTAATAGAAACCCTTCATAAACTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| CDS GCA 90 bp | AGACAGACTGACACACTTCACCTTAGACAGCCGCAGGAACTCCTCTaGTTTCCTCAGTACACTCGGCTCCGCAAGGCCGAGACGCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: RQTDTLHLRQPQELL*FPQYTRLRKAETRG Trigger: GCCCCGCGTCTCGGCCTTGCGGAGCCGAGTGTACTGAGGAAAGCAGAGGAGTTCCTGCGGCTGTCTAAGGTGAAGTGTGTCAGTCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034132.13 ENSMUST00000210146.2 ENSMUST00000211396.2 ENSMUST00000211597.2 |
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| CDS TCA 90 bp | ACAGGAAGCTGCAAGGTCCAGGCATATGACAGCATTGCTGGTTTCTaGGCTACGTGCAGACAGACTGACACACTTCACCTTAGACAGCCG | + |
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Preference number: 5 (lower is better) Translates to: TGSCKVQAYDSIAGF*ATCRQTDTLHLRQP Trigger: CGGCTGTCTAAGGTGAAGTGTGTCAGTCTGTCTGCACGTAGCTCAGAAACCAGCAATGCTGTCATATGCCTGGACCTTGCAGCTTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034132.13 ENSMUST00000210146.2 ENSMUST00000211396.2 ENSMUST00000211597.2 |
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| CDS-3UTR CAA 90 bp | AGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGAATCTGCAGAGTCTCTaGCATGCTGAGAGTAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: REDFHTLHLPDRLHMPAVNLQSL*HAESSA Trigger: CGCACTACTCTCAGCATGCAAGAGACTCTGCAGATT...CACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| CDS TCA 90 bp | CGAATGACAAGTGTTCTTTGCATGCTGAGAGTAGTGCGGCAGTGGTaGAAAGTGGCCTGGACAAGTCAAGATCTGCTCGCTGTGTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: RMTSVLCMLRVVRQW*KVAWTSQDLLAVFQ Trigger: CTGAAACACAGCGAGCAGATCTTGACTTGTCCAGGCCACTTTTCACCACTGCCGCACTACTCTCAGCATGCAAAGAACACTTGTCATTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211597.2 |
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| CDS-3UTR CAA 90 bp | TCCTCTGTACTGAGACACTCCTCAGCACACCTGGAATTCAGGCTTAGAGAAGACACAGTCGATCAAGTATaGCCTTTTTCACACCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSVLRHSSAHLEFRLREDTVDQV*PFSHRM Trigger: CATCCGGTGTGAAAAAGGCAATACTTGATCGACTGT...GTCTTCTCTAAGCCTGAATTCCAGGTGTGCTGAGGAGTGTCTCAGTACAGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR CAA 90 bp | GAATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCCCAGACAGACTGCACACAGTCGATCAAGTATaGCCTTTTTCACACCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: EFRLREDFHTLHLPDRLHTVDQV*PFSHRM Trigger: CATCCGGTGTGAAAAAGGCAATACTTGATCGACTGT...GTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS-3UTR CAA 90 bp | CTTCCACACCCTTCATCTCCCAGACAGACTGCACATGCCTGCAGTGAGATGGAATTACTTCTATTTCTTTaGCTGGTGGTTCAAGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: LPHPSSPRQTAHACSEMELLLFL*LVVQVL Trigger: CAGGACTTGAACCACCAGCAAAAGAAATAGAAGTAA...TTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGGGAGATGAAGGGTGTGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS TCA 90 bp | CCTTTATCTTTAGAATTTTGCATGCTGAGAGTAGTGCGGCAGTGGTaGAAAGTGGCCTGGACAAGTCAAGATCTGCTCGCTGTGTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: PLSLEFCMLRVVRQW*KVAWTSQDLLAVFQ Trigger: CTGAAACACAGCGAGCAGATCTTGACTTGTCCAGGCCACTTTTCACCACTGCCGCACTACTCTCAGCATGCAAAATTCTAAAGATAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000211396.2 |
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| CDS GCA 90 bp | CCAGAGAGCCTAATTAAATATGCTTGGAAAAAGAGCCACTGGGCATaGCTAGGGGAGATTGTGCCCATTAGATTAACTGAGGTGGACAGA | + |
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Preference number: 5 (lower is better) Translates to: PESLIKYAWKKSHWA*LGEIVPIRLTEVDR Trigger: TCTGTCCACCTCAGTTAATCTAATGGGCACAATCTCCCCTAGGCATGCCCAGTGGCTCTTTTTCCAAGCATATTTAATTAGGCTCTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211396.2 |
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| CDS-3UTR CAA 90 bp | TCCTCAGCACACCTGGAATTCAGGCTTAGAGAAGACTTCCACACCCTTCATCTCTTACTTCTATTTCTTTaGCTGGTGGTTCAAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSAHLEFRLREDFHTLHLLLLFL*LVVQVL Trigger: CAGGACTTGAACCACCAGCAAAAGAAATAGAAGTAA...GAGATGAAGGGTGTGGAAGTCTTCTCTAAGCCTGAATTCCAGGTGTGCTGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS GCA 90 bp | CTCTTCAGTGCTGGTCTAGCTAAATCTGCAGAGTCTCTGTTAATCTaGTGCCCAATCTTTTCTAACTGCTTACACAGTCGATCAAGTATT | + |
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Preference number: 5 (lower is better) Translates to: LFSAGLAKSAESLLI*CPIFSNCLHSRSSI Trigger: AATACTTGATCGACTGTGTAAGCAGTTAGAAAAGATTGGGCAGCAGATTAACAGAGACTCTGCAGATTTAGCTAGACCAGCACTGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS GCA 72 bp | GACACACTTCACCTTAGACAGCCGCAGGAACTCCTCTaGTTTCCTCAGTACACTCGGCTCCGCAAGGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: DTLHLRQPQELL*FPQYTRLRKAE Trigger: CTCGGCCTTGCGGAGCCGAGTGTACTGAGGAAAGCAGAGGAGTTCCTGCGGCTGTCTAAGGTGAAGTGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034132.13 ENSMUST00000210146.2 ENSMUST00000211396.2 ENSMUST00000211597.2 |
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| CDS CAA 90 bp | GGGCACTTCCTACAGGAAGCTGCAAGGTCCAGGCATATGACAGCATaGCTGGTTTCTGAGCTACGTGCAGACAGACTGACACACTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: GHFLQEAARSRHMTA*LVSELRADRLTHFT Trigger: GGTGAAGTGTGTCAGTCTGTCTGCACGTAGCTCAGAAACCAGCAATGCTGTCATATGCCTGGACCTTGCAGCTTCCTGTAGGAAGTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034132.13 ENSMUST00000210146.2 ENSMUST00000211396.2 ENSMUST00000211597.2 |
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| CDS TCA 72 bp | AGAGTCTCTTGCATGCTGAGAGTAGTGCGGCAGTGGTaGAAAGTGGCCTGGACAAGTCAAGATCTGCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RVSCMLRVVRQW*KVAWTSQDLLA Trigger: AGCGAGCAGATCTTGACTTGTCCAGGCCACTTTTCACCACTGCCGCACTACTCTCAGCATGCAAGAGACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210146.2 |
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| CDS GCA 72 bp | GGCAGTGGTGAAAAGTGGCCTGGACAAGTCAAGATCTaGTCGCTGTGTTTCAGGAAGACCAGACTCGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSGEKWPGQVKI*SLCFRKTRLVA Trigger: AGCTACGAGTCTGGTCTTCCTGAAACACAGCGAGCAGATCTTGACTTGTCCAGGCCACTTTTCACCACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 ENSMUST00000211396.2 ENSMUST00000211597.2 |
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| CDS TCA 72 bp | AGTGTTCTTTGCATGCTGAGAGTAGTGCGGCAGTGGTaGAAAGTGGCCTGGACAAGTCAAGATCTGCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SVLCMLRVVRQW*KVAWTSQDLLA Trigger: AGCGAGCAGATCTTGACTTGTCCAGGCCACTTTTCACCACTGCCGCACTACTCTCAGCATGCAAAGAACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211597.2 |
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| CDS CAA 72 bp | CTACAGGAAGCTGCAAGGTCCAGGCATATGACAGCATaGCTGGTTTCTGAGCTACGTGCAGACAGACTGACA | + |
|
Preference number: 6 (lower is better) Translates to: LQEAARSRHMTA*LVSELRADRLT Trigger: TGTCAGTCTGTCTGCACGTAGCTCAGAAACCAGCAATGCTGTCATATGCCTGGACCTTGCAGCTTCCTGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034132.13 ENSMUST00000210146.2 ENSMUST00000211396.2 ENSMUST00000211597.2 |
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| CDS GCA 72 bp | TTCAGGAAGACCAGACTCGTAGCTCTGCAGTATCTCTaGAGCCAAGTTCACTGCTTCTGTACAGCTGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: FRKTRLVALQYL*SQVHCFCTAEL Trigger: CAGTTCAGCTGTACAGAAGCAGTGAACTTGGCTGCAGAGATACTGCAGAGCTACGAGTCTGGTCTTCCTGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000210146.2 ENSMUST00000211396.2 ENSMUST00000211597.2 |
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| CDS TCA 72 bp | TTAGAATTTTGCATGCTGAGAGTAGTGCGGCAGTGGTaGAAAGTGGCCTGGACAAGTCAAGATCTGCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LEFCMLRVVRQW*KVAWTSQDLLA Trigger: AGCGAGCAGATCTTGACTTGTCCAGGCCACTTTTCACCACTGCCGCACTACTCTCAGCATGCAAAATTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 ENSMUST00000211396.2 |
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| CDS GCA 72 bp | GCTGGTCTAGCTAAATCTGCAGAGTCTCTGTTAATCTaGTGCCCAATCTTTTCTAACTGCTTACACAGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: AGLAKSAESLLI*CPIFSNCLHSR Trigger: TCGACTGTGTAAGCAGTTAGAAAAGATTGGGCAGCAGATTAACAGAGACTCTGCAGATTTAGCTAGACCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS GCA 72 bp | CTAATTAAATATGCTTGGAAAAAGAGCCACTGGGCATaGCTAGGGGAGATTGTGCCCATTAGATTAACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LIKYAWKKSHWA*LGEIVPIRLTE Trigger: CTCAGTTAATCTAATGGGCACAATCTCCCCTAGGCATGCCCAGTGGCTCTTTTTCCAAGCATATTTAATTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211396.2 |
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| CDS GCA 72 bp | GAGTCTCTGTTAATCTGCTGCCCAATCTTTTCTAACTaGTTACACAGTCGATCAAGTATTGCCTTTTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: ESLLICCPIFSN*LHSRSSIAFFT Trigger: TGTGAAAAAGGCAATACTTGATCGACTGTGTAAGCAGTTAGAAAAGATTGGGCAGCAGATTAACAGAGACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034132.13 ENSMUST00000170141.3 |
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| CDS TCA 72 bp | AATCCTAGTAAACACTCAAAAGATTTAAGACAGCTCTaGTACACCATCTTGTTCAAACCAGAGAGCCTAATT | + |
|
Preference number: 6 (lower is better) Translates to: NPSKHSKDLRQL*YTILFKPESLI Trigger: AATTAGGCTCTCTGGTTTGAACAAGATGGTGTATCAGAGCTGTCTTAAATCTTTTGAGTGTTTACTAGGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034132.13 ENSMUST00000210146.2 ENSMUST00000211396.2 ENSMUST00000211597.2 |
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