Pregenerated sensors for ORC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040044Ensembl transcript IDs: ENSMUST00000048706.10, ENSMUST00000108142.8, ENSMUST00000140334.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | TCTTTGAAGTACTCCAAAAACGTTTTGATACAAATATaGAAGTTGGACATGGAACTCTTCTTGTCTTCACTC | + |
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Preference number: 3 (lower is better) Translates to: SLKYSKNVLIQI*KLDMELFLSSL Trigger: GAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTGGAGTACTTCAAAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | GATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTGCAGCCCCTTTGGCTGTaGTCCACAGGCATCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: DTNMQVGHGTLLVFTLLLQPLWL*STGILF Trigger: GAAGAGGATGCCTGTGGATCACAGCCAAAGGGGCTG...CAGCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | TTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCCAGCAGCTGCAAGGCTaGCTTGTACTCCTCCGAATC | + |
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Preference number: 4 (lower is better) Translates to: LIQICKLDMELFLSSLSCQQLQG*LVLLRI Trigger: GATTCGGAGGAGTACAAGTCAGCCTTGCAGCTGCTG...GCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | CAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCCAGCCCCTTTGGCTGTaGTCCACAGGCATCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: QKRFDTNMQVGHGTLLVFQPLWL*STGILF Trigger: GAAGAGGATGCCTGTGGATCACAGCCAAAGGGGCTG...GAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | CGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCGTCACCTCCTTGGAATaGCTGTCTACACAGCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: RFDTNMQVGHGTLLVFTLVTSLE*LSTQQS Trigger: GGACTGCTGTGTAGACAGGCATTCCAAGGAGGTGAC...GAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | GATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTGAGCATTCTCAGCAGCTaGAAGGCTGACTTGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: DTNMQVGHGTLLVFTLLLSILSS*KADLYS Trigger: GGAGTACAAGTCAGCCTTGCAGCTGCTGAGAATGCT...CAGCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | AAGTACTCCAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCCAGCAGCTGCAAGGCTaGCTTGTACTCCTCCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: KYSKNVLIQICKLDMELFQQLQG*LVLLRI Trigger: GATTCGGAGGAGTACAAGTCAGCCTTGCAGCTGCTG...GAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTGGAGTACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | GATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTGCTCATTTGTCAGCAGTaGCACTTGCTTTCCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DTNMQVGHGTLLVFTLLLLICQQ*HLLSQR Trigger: CCTTTGGGAAAGCAAGTGGCACTGCTGACAAATGAG...CAGCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | CGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCAAGTACACTACCTCATaGAGAGGCTGGCTCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RFDTNMQVGHGTLLVFTLKYTTS*RGWLSG Trigger: TCCTGAGAGCCAGCCTCTGCATGAGGTAGTGTACTT...GAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | CGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCAGCTGTCACAACTGTTaGAAAAGCCTCTGCCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RFDTNMQVGHGTLLVFTLSCHNC*KSLCPV Trigger: GACTGGGCAGAGGCTTTTGCAACAGTTGTGACAGCT...GAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR CCA 90 bp | TTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCCACTTGTCACCTCCTTaGAATGCCTGTCTACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIQICKLDMELFLSSLSCHLSPP*NACLHS Trigger: GCTGTGTAGACAGGCATTCCAAGGAGGTGACAAGTG...GCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR CCA 90 bp | CGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCCACTTGTCACCTCCTTaGAATGCCTGTCTACACAGC | + |
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Preference number: 4 (lower is better) Translates to: RFDTNMQVGHGTLLVFTLHLSPP*NACLHS Trigger: GCTGTGTAGACAGGCATTCCAAGGAGGTGACAAGTG...GAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | GATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTGAGAGCCCCAGTCTCTTaGATTTTTCTGGAATTCAGG | + |
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Preference number: 4 (lower is better) Translates to: DTNMQVGHGTLLVFTLLLRAPVS*IFLEFR Trigger: CCTGAATTCCAGAAAAATTCAAGAGACTGGGGCTCT...CAGCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | TTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTCTTTTCTTGGCTTCTaGGAGATCGCAGCACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LIQICKLDMELFLSSLSCSFLGF*EIAAQN Trigger: GTTCTGTGCTGCGATCTCTCAGAAGCCAAGAAAAGA...GCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | TTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCCCGCCAATGGCCAGATaGTGTCCTCTTTTTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LIQICKLDMELFLSSLSCPPMAR*CPLFDC Trigger: ACAATCAAAAAGAGGACAGCATCTGGCCATTGGCGG...GCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | TTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCCTCATTTGTCAGCAGTaGCACTTGCTTTCCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIQICKLDMELFLSSLSCLICQQ*HLLSQR Trigger: CCTTTGGGAAAGCAAGTGGCACTGCTGACAAATGAG...GCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR CCA 90 bp | GATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTGGTCAGGGGCAGTATTTaGAATACATCCTTCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DTNMQVGHGTLLVFTLLLVRGSI*NTSFQF Trigger: GAACTGGAAGGATGTATTCCAAATACTGCCCCTGAC...CAGCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | GATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTGTCTCTGTTAGACTTCTaGGTATCACATCATGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: DTNMQVGHGTLLVFTLLLSLLDF*VSHHDP Trigger: CGGATCATGATGTGATACTCAGAAGTCTAACAGAGA...CAGCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | GATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTGATGCTGTCCTCTTTTTaGTTGTCACTTTGTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTNMQVGHGTLLVFTLLLMLSSF*LSLCGL Trigger: CAGACCACAAAGTGACAATCAAAAAGAGGACAGCAT...CAGCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | AAGTACTCCAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCAGCATTCTCAGCAGCTaGAAGGCTGACTTGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KYSKNVLIQICKLDMELFSILSS*KADLYS Trigger: GGAGTACAAGTCAGCCTTGCAGCTGCTGAGAATGCT...GAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTGGAGTACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | CGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCCATCCTCTTCCTCTTTaGTATCTGCATCGAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: RFDTNMQVGHGTLLVFTLHPLPL*YLHRGS Trigger: AGAACCTCGATGCAGATAGCAAAGAGGAAGAGGATG...GAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048706.10 |
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| CDS-3UTR GCA 90 bp | AAGTACTCCAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCAAGTACACTACCTCATaGAGAGGCTGGCTCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KYSKNVLIQICKLDMELFKYTTS*RGWLSG Trigger: TCCTGAGAGCCAGCCTCTGCATGAGGTAGTGTACTT...GAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTGGAGTACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | CAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCAGCTGTCACAACTGTTaGAAAAGCCTCTGCCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QKRFDTNMQVGHGTLLVFSCHNC*KSLCPV Trigger: GACTGGGCAGAGGCTTTTGCAACAGTTGTGACAGCT...GAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR CCA 90 bp | GATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTGCTTCAGGTAATAGTATaGGTTGTTGAGTGCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: DTNMQVGHGTLLVFTLLLLQVIV*VVECSV Trigger: CACACTGCACTCAACAACCCATACTATTACCTGAAG...CAGCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR CCA 90 bp | CGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCGTCAGGGGCAGTATTTaGAATACATCCTTCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: RFDTNMQVGHGTLLVFTLVRGSI*NTSFQF Trigger: GAACTGGAAGGATGTATTCCAAATACTGCCCCTGAC...GAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | GTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTAGAGCCCCAGTCTCTTaGATTTTTCTGGAATTCAGG | + |
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Preference number: 4 (lower is better) Translates to: VLIQICKLDMELFLSSLSRAPVS*IFLEFR Trigger: CCTGAATTCCAGAAAAATTCAAGAGACTGGGGCTCT...AGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | TTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTCTCTGAATTTCATTTaGGAGCCCCAGTCTCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: LIQICKLDMELFLSSLSCSLNFI*EPQSLE Trigger: TTCAAGAGACTGGGGCTCTCAAATGAAATTCAGAGA...GCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | CGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCATGCTGTCCTCTTTTTaGTTGTCACTTTGTGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: RFDTNMQVGHGTLLVFTLMLSSF*LSLCGL Trigger: CAGACCACAAAGTGACAATCAAAAAGAGGACAGCAT...GAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | TTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCAACTCATGCAGATGCTaGCTGCTGATAGTTATGAAG | + |
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Preference number: 4 (lower is better) Translates to: LIQICKLDMELFLSSLSCNSCRC*LLIVMK Trigger: CTTCATAACTATCAGCAGTCAGCATCTGCATGAGTT...GCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | CGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCAACTCATGCAGATGCTaGCTGCTGATAGTTATGAAG | + |
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Preference number: 4 (lower is better) Translates to: RFDTNMQVGHGTLLVFTLNSCRC*LLIVMK Trigger: CTTCATAACTATCAGCAGTCAGCATCTGCATGAGTT...GAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | AAGTACTCCAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTCTTTTCTTGGCTTCTaGGAGATCGCAGCACAGAAC | + |
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Preference number: 4 (lower is better) Translates to: KYSKNVLIQICKLDMELFSFLGF*EIAAQN Trigger: GTTCTGTGCTGCGATCTCTCAGAAGCCAAGAAAAGA...GAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTGGAGTACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | CGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTCAGGATGGGACTTCTaGAGAAAGTCAACTAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: RFDTNMQVGHGTLLVFTLSGWDF*RKSTRL Trigger: TAACCTAGTTGACTTTCTGCAGAAGTCCCATCCTGA...GAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | CAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCTGTCACTTTGTGGTCTaGTTTCTGTGTGACTGCCGA | + |
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Preference number: 4 (lower is better) Translates to: QKRFDTNMQVGHGTLLVFCHFVV*FLCDCR Trigger: TCGGCAGTCACACAGAAAGCAGACCACAAAGTGACA...GAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | CAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCCCGCCAATGGCCAGATaGTGTCCTCTTTTTGATTGT | + |
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Preference number: 4 (lower is better) Translates to: QKRFDTNMQVGHGTLLVFPPMAR*CPLFDC Trigger: ACAATCAAAAAGAGGACAGCATCTGGCCATTGGCGG...GAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | CGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCGTTGTGTTGCCAAGCTaGTTTTCAGTAGAGGAATCT | + |
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Preference number: 4 (lower is better) Translates to: RFDTNMQVGHGTLLVFTLVVLPS*FSVEES Trigger: AGATTCCTCTACTGAAAAGCAGCTTGGCAACACAAC...GAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR CCA 90 bp | GATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTGTTGATTGTCACTTTGTaGTCTGCTTTCTGTGTGACT | + |
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Preference number: 4 (lower is better) Translates to: DTNMQVGHGTLLVFTLLLLIVTL*SAFCVT Trigger: AGTCACACAGAAAGCAGACCACAAAGTGACAATCAA...CAGCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR CCA 90 bp | TTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCCTTCAGGTAATAGTATaGGTTGTTGAGTGCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LIQICKLDMELFLSSLSCLQVIV*VVECSV Trigger: CACACTGCACTCAACAACCCATACTATTACCTGAAG...GCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | GTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTCTCTGAATTTCATTTaGGAGCCCCAGTCTCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: VLIQICKLDMELFLSSLSSLNFI*EPQSLE Trigger: TTCAAGAGACTGGGGCTCTCAAATGAAATTCAGAGA...AGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | GTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTCTCTGTTAGACTTCTaGGTATCACATCATGATCCG | + |
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Preference number: 4 (lower is better) Translates to: VLIQICKLDMELFLSSLSSLLDF*VSHHDP Trigger: CGGATCATGATGTGATACTCAGAAGTCTAACAGAGA...AGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | GTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTCAGGATGGGACTTCTaGAGAAAGTCAACTAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: VLIQICKLDMELFLSSLSSGWDF*RKSTRL Trigger: TAACCTAGTTGACTTTCTGCAGAAGTCCCATCCTGA...AGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR GCA 90 bp | GTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTGTTGTGTTGCCAAGCTaGTTTTCAGTAGAGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: VLIQICKLDMELFLSSLSVVLPS*FSVEES Trigger: AGATTCCTCTACTGAAAAGCAGCTTGGCAACACAAC...AGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR CCA 90 bp | TTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTTGATTGTCACTTTGTaGTCTGCTTTCTGTGTGACT | + |
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Preference number: 4 (lower is better) Translates to: LIQICKLDMELFLSSLSCLIVTL*SAFCVT Trigger: AGTCACACAGAAAGCAGACCACAAAGTGACAATCAA...GCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
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| CDS-3UTR TCA 90 bp | CAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCCTGTTGGAATTTCTCTaGATTTCATTTGAGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QKRFDTNMQVGHGTLLVFLLEFL*ISFESP Trigger: GGGGCTCTCAAATGAAATTCAGAGAAATTCCAACAG...GAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR TCA 90 bp | CGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTCTTCCAGCAATGATTaGGTTTTCTCCTTTAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RFDTNMQVGHGTLLVFTLSSSND*VFSFKK Trigger: CTTCTTAAAGGAGAAAACTCAATCATTGCTGGAAGA...GAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR GCA 90 bp | GATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTGAATTCCTCCTGTAATTaGTCTGTTTCAGATTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: DTNMQVGHGTLLVFTLLLNSSCN*SVSDFI Trigger: GATGAAATCTGAAACAGAGCAATTACAGGAGGAATT...CAGCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR GCA 90 bp | CAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCCATCCTCTTCCTCTTTaGTATCATCGAGGTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QKRFDTNMQVGHGTLLVFHPLPL*YHRGSE Trigger: TTCAGAACCTCGATGATAGCAAAGAGGAAGAGGATG...GAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108142.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCCATTTACTCTTTTCTTaGCTTCTGAGAGATCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKRFDTNMQVGHGTLLVFHLLFS*LLRDRS Trigger: GCTGCGATCTCTCAGAAGCCAAGAAAAGAGTAAATG...GAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| 3UTR CAA 72 bp | AAGTACTCCAAAAACGTTTTGATACAAATATGCAAGTaGGACATGGAACTCTTCTTGTCTTCACTCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KYSKNVLIQICK*DMELFLSSLSC Trigger: GCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTGGAGTACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTCTTCCAGCAATGATTaGGTTTTCTCCTTTAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLIQICKLDMELFLSSLSSSSND*VFSFKK Trigger: CTTCTTAAAGGAGAAAACTCAATCATTGCTGGAAGA...AGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTATAGTTATGAAGTCTTaGAGGACTTTGCTGGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLIQICKLDMELFLSSLSIVMKS*RTLLVK Trigger: TTTCACCAGCAAAGTCCTCCAAGACTTCATAACTAT...AGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTAATTCCTCCTGTAATTaGTCTGTTTCAGATTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VLIQICKLDMELFLSSLSNSSCN*SVSDFI Trigger: GATGAAATCTGAAACAGAGCAATTACAGGAGGAATT...AGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS CCA 90 bp | CTCTCCATGCTCTTTAAGATAAGCACCACAGGAGGGGACCGCCAATaGCCAGATGCTGTCCTCTTTTTGATTGTCACTTTGTGGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSMLFKISTTGGDRQ*PDAVLFLIVTLWSA Trigger: AGCAGACCACAAAGTGACAATCAAAAAGAGGACAGCATCTGGCCATTGGCGGTCCCCTCCTGTGGTGCTTATCTTAAAGAGCATGGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 ENSMUST00000140334.2 |
||
| CDS CCA 90 bp | GACCGCCAATGGCCAGATGCTGTCCTCTTTTTGATTGTCACTTTGTaGTCTGCTTTCTGTGTGACTGCCGAATACCAACTACAAAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DRQWPDAVLFLIVTL*SAFCVTAEYQLQRE Trigger: TTCCCTTTGTAGTTGGTATTCGGCAGTCACACAGAAAGCAGACCACAAAGTGACAATCAAAAAGAGGACAGCATCTGGCCATTGGCGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 ENSMUST00000140334.2 |
||
| CDS TCA 90 bp | GATCCACAGGCATCCTCTTCCTCTTTGCTATCTGCATCGAGGTTCTaGAACTGGGTCAGGAAATCCTTTATTTTCTGTGTTGTGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DPQASSSSLLSASRF*NWVRKSFIFCVVLP Trigger: TGGCAACACAACACAGAAAATAAAGGATTTCCTGACCCAGTTTCAGAACCTCGATGCAGATAGCAAAGAGGAAGAGGATGCCTGTGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048706.10 |
||
| CDS GCA 90 bp | CCAATGGCCAGATGCTGTCCTCTTTTTGATTGTCACTTTGTGGTCTaGTTTCTGTGTGACTGCCGAATACCAACTACAAAGGGAATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PMARCCPLFDCHFVV*FLCDCRIPTTKGIH Trigger: ATGGATTCCCTTTGTAGTTGGTATTCGGCAGTCACACAGAAAGCAGACCACAAAGTGACAATCAAAAAGAGGACAGCATCTGGCCATTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 ENSMUST00000140334.2 |
||
| CDS TCA 90 bp | TGTGATCCACAGGCATCCTCTTCCTCTTTGCTATCATCGAGGTTCTaGAACTGGGTCAGGAAATCCTTTATTTTCTGTGTTGTGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CDPQASSSSLLSSRF*NWVRKSFIFCVVLP Trigger: TGGCAACACAACACAGAAAATAAAGGATTTCCTGACCCAGTTTCAGAACCTCGATGATAGCAAAGAGGAAGAGGATGCCTGTGGATCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | CGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCCCACTTGTCACCTCCTaGGAATGCCTGTCTACACAG | + |
|
Preference number: 5 (lower is better) Translates to: RFDTNMQVGHGTLLVFTLPLVTS*ECLSTQ Trigger: CTGTGTAGACAGGCATTCCAAGGAGGTGACAAGTGG...GAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | TTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTGCTCACGGAGTGTGTaGGCAGCACTGAAGTACACT | + |
|
Preference number: 5 (lower is better) Translates to: LIQICKLDMELFLSSLSCCSRSV*AALKYT Trigger: AGTGTACTTCAGTGCTGCCAACACACTCCGTGAGCA...GCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS TCA 90 bp | TGCTTTCTGTGTGACTGCCGAATACCAACTACAAAGGGAATCCATTaGATAATTTGTCTTCTTCAGGGCCTTACCACTTGTCACCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CFLCDCRIPTTKGIH*IICLLQGLTTCHLL Trigger: AAGGAGGTGACAAGTGGTAAGGCCCTGAAGAAGACAAATTATTCAATGGATTCCCTTTGTAGTTGGTATTCGGCAGTCACACAGAAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 ENSMUST00000140334.2 |
||
| CDS-3UTR CAA 90 bp | GTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTCCACTTGTCACCTCCTaGGAATGCCTGTCTACACAG | + |
|
Preference number: 5 (lower is better) Translates to: VLIQICKLDMELFLSSLSPLVTS*ECLSTQ Trigger: CTGTGTAGACAGGCATTCCAAGGAGGTGACAAGTGG...AGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCTCAGGGCCTTACCACTaGTCACCTCCTTGGAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: QKRFDTNMQVGHGTLLVFSGPYH*SPPWNA Trigger: GGCATTCCAAGGAGGTGACAAGTGGTAAGGCCCTGA...GAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | CGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTCACCAGTTCATCCTTaGCCAGCATTCTCAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RFDTNMQVGHGTLLVFTLSPVHP*PAFSAA Trigger: AGCTGCTGAGAATGCTGGCAAAGGATGAACTGGTGA...GAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTCACGGAGTGTGTaGGCAGCACTGAAGTACACT | + |
|
Preference number: 5 (lower is better) Translates to: VLIQICKLDMELFLSSLSCSRSV*AALKYT Trigger: AGTGTACTTCAGTGCTGCCAACACACTCCGTGAGCA...AGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | TTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCGAGAGCCCCAGTCTCTaGAATTTTTCTGGAATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LIQICKLDMELFLSSLSCESPSL*NFSGIQ Trigger: CTGAATTCCAGAAAAATTCAAGAGACTGGGGCTCTC...GCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | CGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTAAGAAGGTCTCATTaGTCAGCAGTGCCACTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RFDTNMQVGHGTLLVFTLLRRSH*SAVPLA Trigger: AGCAAGTGGCACTGCTGACAAATGAGACCTTCTTAA...GAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | AAGTACTCCAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTCACCAGTTCATCCTTaGCCAGCATTCTCAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KYSKNVLIQICKLDMELFSPVHP*PAFSAA Trigger: AGCTGCTGAGAATGCTGGCAAAGGATGAACTGGTGA...GAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTGGAGTACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | CGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTGTGAAGAGCGATTCTaGGAGCAGCATTTAAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RFDTNMQVGHGTLLVFTLCEERF*EQHLSA Trigger: AGCACTTAAATGCTGCTCCAAGAATCGCTCTTCACA...GAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | TTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCACATTTACTCTTTTCTaGGCTTCTGAGAGATCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LIQICKLDMELFLSSLSCTFTLF*ASERSQ Trigger: CTGCGATCTCTCAGAAGCCAAGAAAAGAGTAAATGT...GCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCGAGAGCCCCAGTCTCTaGAATTTTTCTGGAATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QKRFDTNMQVGHGTLLVFESPSL*NFSGIQ Trigger: CTGAATTCCAGAAAAATTCAAGAGACTGGGGCTCTC...GAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | GATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCTGAATCCATTGAATAATTaGTCTTCTTCAGGGCCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: DTNMQVGHGTLLVFTLLLNPLNN*SSSGPY Trigger: GTAAGGCCCTGAAGAAGACAAATTATTCAATGGATT...CAGCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTGATGCTGTCCTCTTTTaGATTGTCACTTTGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLIQICKLDMELFLSSLSDAVLF*IVTLWS Trigger: AGACCACAAAGTGACAATCAAAAAGAGGACAGCATC...AGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | AAGTACTCCAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTAAGAAGGTCTCATTaGTCAGCAGTGCCACTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KYSKNVLIQICKLDMELFLRRSH*SAVPLA Trigger: AGCAAGTGGCACTGCTGACAAATGAGACCTTCTTAA...GAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTGGAGTACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | TTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCATTTTCTGTGTTGTGTaGCCAAGCTGCTTTTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LIQICKLDMELFLSSLSCIFCVV*PSCFSV Trigger: TACTGAAAAGCAGCTTGGCAACACAACACAGAAAAT...GCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCTGTGAAGAGCGATTCTaGGAGCAGCATTTAAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QKRFDTNMQVGHGTLLVFCEERF*EQHLSA Trigger: AGCACTTAAATGCTGCTCCAAGAATCGCTCTTCACA...GAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | TTGATACAAATATGCAAGTTGGACATGGAACTCTTCTTGTCTTCACTCTCTTGCAATCCATTGAATAATTaGTCTTCTTCAGGGCCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LIQICKLDMELFLSSLSCNPLNN*SSSGPY Trigger: GTAAGGCCCTGAAGAAGACAAATTATTCAATGGATT...GCAAGAGAGTGAAGACAAGAAGAGTTCCATGTCCAACTTGCATATTTGTATCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | AAGTACTCCAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCGATGCTGTCCTCTTTTaGATTGTCACTTTGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KYSKNVLIQICKLDMELFDAVLF*IVTLWS Trigger: AGACCACAAAGTGACAATCAAAAAGAGGACAGCATC...GAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTGGAGTACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS-3UTR CAA 90 bp | AAGTACTCCAAAAACGTTTTGATACAAATATGCAAGTTGGACATGGAACTCTTCACATTTACTCTTTTCTaGGCTTCTGAGAGATCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KYSKNVLIQICKLDMELFTFTLF*ASERSQ Trigger: CTGCGATCTCTCAGAAGCCAAGAAAAGAGTAAATGT...GAAGAGTTCCATGTCCAACTTGCATATTTGTATCAAAACGTTTTTGGAGTACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS CAA 72 bp | TCTGAAGGTGATACAGGTCTGTCTTCTGCAGCCCCTTaGGCTGTGATCCACAGGCATCCTCTTCCTCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SEGDTGLSSAAP*AVIHRHPLPLC Trigger: GCAAAGAGGAAGAGGATGCCTGTGGATCACAGCCAAAGGGGCTGCAGAAGACAGACCTGTATCACCTTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS CAA 72 bp | GGAGGGGACCGCCAATGGCCAGATGCTGTCCTCTTTTaGATTGTCACTTTGTGGTCTGCTTTCTGTGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: GGDRQWPDAVLF*IVTLWSAFCVT Trigger: AGTCACACAGAAAGCAGACCACAAAGTGACAATCAAAAAGAGGACAGCATCTGGCCATTGGCGGTCCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 ENSMUST00000140334.2 |
||
| CDS CAA 90 bp | GGGGACCGCCAATGGCCAGATGCTGTCCTCTTTTTGATTGTCACTTaGTGGTCTGCTTTCTGTGTGACTGCCGAATACCAACTACAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GDRQWPDAVLFLIVT*WSAFCVTAEYQLQR Trigger: CCTTTGTAGTTGGTATTCGGCAGTCACACAGAAAGCAGACCACAAAGTGACAATCAAAAAGAGGACAGCATCTGGCCATTGGCGGTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 ENSMUST00000140334.2 |
||
| CDS CCA 72 bp | TTGTCTTCTTCAGGGCCTTACCACTTGTCACCTCCTTaGAATGCCTGTCTACACAGCAGTCCATCAACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSSSGPYHLSPP*NACLHSSPSTV Trigger: CACAGTTGATGGACTGCTGTGTAGACAGGCATTCCAAGGAGGTGACAAGTGGTAAGGCCCTGAAGAAGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 ENSMUST00000140334.2 |
||
| CDS CCA 72 bp | TCATTTGTCAGCAGTGCCACTTGCTTTCCCAAAGGCTaGTTTTCCACGTACCTCCTAAATGAAGGAAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SFVSSATCFPKG*FSTYLLNEGRR Trigger: CCGCCTTCCTTCATTTAGGAGGTACGTGGAAAACCAGCCTTTGGGAAAGCAAGTGGCACTGCTGACAAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS CAA 72 bp | ATTCTTGGAGCAGCATTTAAGTGCTCACGGAGTGTGTaGGCAGCACTGAAGTACACTACCTCATGCAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ILGAAFKCSRSV*AALKYTTSCRG Trigger: GCCTCTGCATGAGGTAGTGTACTTCAGTGCTGCCAACACACTCCGTGAGCACTTAAATGCTGCTCCAAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS CAA 90 bp | GGTCTTCCAGCAATGATTGAGTTTTCTCCTTTAAGAAGGTCTCATTaGTCAGCAGTGCCACTTGCTTTCCCAAAGGCTGGTTTTCCACGT | + |
|
Preference number: 6 (lower is better) Translates to: GLPAMIEFSPLRRSH*SAVPLAFPKAGFPR Trigger: ACGTGGAAAACCAGCCTTTGGGAAAGCAAGTGGCACTGCTGACAAATGAGACCTTCTTAAAGGAGAAAACTCAATCATTGCTGGAAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS CAA 72 bp | CAATGGCCAGATGCTGTCCTCTTTTTGATTGTCACTTaGTGGTCTGCTTTCTGTGTGACTGCCGAATACCAA | + |
|
Preference number: 6 (lower is better) Translates to: QWPDAVLFLIVT*WSAFCVTAEYQ Trigger: TTGGTATTCGGCAGTCACACAGAAAGCAGACCACAAAGTGACAATCAAAAAGAGGACAGCATCTGGCCATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 ENSMUST00000140334.2 |
||
| CDS CAA 72 bp | GCAATGATTGAGTTTTCTCCTTTAAGAAGGTCTCATTaGTCAGCAGTGCCACTTGCTTTCCCAAAGGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: AMIEFSPLRRSH*SAVPLAFPKAG Trigger: ACCAGCCTTTGGGAAAGCAAGTGGCACTGCTGACAAATGAGACCTTCTTAAAGGAGAAAACTCAATCATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 |
||
| CDS TCA 72 bp | GCATCCTCTTCCTCTTTGCTATCTGCATCGAGGTTCTaGAACTGGGTCAGGAAATCCTTTATTTTCTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ASSSSLLSASRF*NWVRKSFIFCV Trigger: AACACAGAAAATAAAGGATTTCCTGACCCAGTTTCAGAACCTCGATGCAGATAGCAAAGAGGAAGAGGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048706.10 |
||
| CDS TCA 72 bp | CAGGCATCCTCTTCCTCTTTGCTATCATCGAGGTTCTaGAACTGGGTCAGGAAATCCTTTATTTTCTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: QASSSSLLSSRF*NWVRKSFIFCV Trigger: AACACAGAAAATAAAGGATTTCCTGACCCAGTTTCAGAACCTCGATGATAGCAAAGAGGAAGAGGATGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108142.8 |
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| CDS GCA 72 bp | AGATGCTGTCCTCTTTTTGATTGTCACTTTGTGGTCTaGTTTCTGTGTGACTGCCGAATACCAACTACAAAG | + |
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Preference number: 6 (lower is better) Translates to: RCCPLFDCHFVV*FLCDCRIPTTK Trigger: CTTTGTAGTTGGTATTCGGCAGTCACACAGAAAGCAGACCACAAAGTGACAATCAAAAAGAGGACAGCATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 ENSMUST00000140334.2 |
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| CDS CAA 72 bp | CCGAATACCAACTACAAAGGGAATCCATTGAATAATTaGTCTTCTTCAGGGCCTTACCACTTGTCACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PNTNYKGNPLNN*SSSGPYHLSPP Trigger: AGGAGGTGACAAGTGGTAAGGCCCTGAAGAAGACAAATTATTCAATGGATTCCCTTTGTAGTTGGTATTCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048706.10 ENSMUST00000108142.8 ENSMUST00000140334.2 |
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