Pregenerated sensors for ORC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028587Ensembl transcript IDs: ENSMUST00000102744.4
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTATACCTTGGCCACCAGCTGGATaGCATCGTCCTCAAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PLTSDQPTRDFSEATSIPWPPAG*HRPQRP Trigger: GGGCCTTTGAGGACGATGCCATCCAGCTGGTGGCCA...AGGTATACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | CCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTATACCTGCTCGCAGATCTCCGTaGCACGCCTGCAGATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PLTSDQPTRDFSEATSIPARRSP*HACRCP Trigger: TGGACATCTGCAGGCGTGCCACGGAGATCTGCGAGC...AGGTATACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR TCA 90 bp | CCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTATACCTGCAAGAACCCAGACGTaGGCACACAGCCATGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: PLTSDQPTRDFSEATSIPARTQT*AHSHGL Trigger: GAGACCATGGCTGTGTGCTCACGTCTGGGTTCTTGC...AGGTATACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR GCA 90 bp | AGTCTTCCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTATCTCCAGAGAGGGCTaGTACCTTCCTGGCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: SLPLTSDQPTRDFSEATSISREG*YLPGHQ Trigger: CTGGTGGCCAGGAAGGTAGCAGCCCTCTCTGGAGAT...ACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGGAAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | AGTCTTCCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTTTCCTGGCCACCAGCTaGATGGCATCGTCCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SLPLTSDQPTRDFSEATSFLATS*MASSSK Trigger: CTTTGAGGACGATGCCATCCAGCTGGTGGCCAGGAA...ACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGGAAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR TCA 90 bp | CCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTATACCTAAGTGGGCCCCTTTGTaGGTAGGCCAATCAAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: PLTSDQPTRDFSEATSIPKWAPL*VGQSKR Trigger: CCTCTTTGATTGGCCTACTCACAAAGGGGCCCACTT...AGGTATACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR GCA 90 bp | CCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTATACCTCGCCAGCAGTTCTGCTaGATGATTGGCTGTTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: PLTSDQPTRDFSEATSIPRQQFC*MIGCCL Trigger: AAGGCAACAGCCAATCATGCAGCAGAACTGCTGGCG...AGGTATACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | AGTCTTCCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTTGCTGCAAGCACTTCTaGTGGCAGTGGTGCAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: SLPLTSDQPTRDFSEATSCCKHF*WQWCKV Trigger: GACTTTGCACCACTGCCACCAGAAGTGCTTGCAGCA...ACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGGAAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | CCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTATACCTATAGCTTCCATTAAGTaGGCCACAGTCACCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PLTSDQPTRDFSEATSIPIASIK*ATVTRL Trigger: GAGCCTGGTGACTGTGGCCCACTTAATGGAAGCTAT...AGGTATACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | AGTCTTCCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTGACTCTTCCTCTTCTTaGTCCCTGTCATCACCATCT | + |
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Preference number: 4 (lower is better) Translates to: SLPLTSDQPTRDFSEATSDSSSS*SLSSPS Trigger: AGATGGTGATGACAGGGACCAAGAAGAGGAAGAGTC...ACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGGAAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR TCA 90 bp | CCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTATACCTCGGATGGGTTCTTTGTaGGTTTCTTGTTCTTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: PLTSDQPTRDFSEATSIPRMGSL*VSCSFA Trigger: GGCAAAAGAACAAGAAACTCACAAAGAACCCATCCG...AGGTATACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR GCA 90 bp | ATTTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTCTCCGTGGCACGCCTaGAGATGTCCAGGCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: ISQRQPVYLTSYKFSQNYSPWHA*RCPGSA Trigger: GGCGCTGCCTGGACATCTGCAGGCGTGCCACGGAGA...ATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR GCA 90 bp | AGTCTTCCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTTTCTGGTGGCAGTGGTaGAAAGTCCTTTTTATTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLPLTSDQPTRDFSEATSFWWQW*KVLFIP Trigger: TGGAATAAAAAGGACTTTGCACCACTGCCACCAGAA...ACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGGAAGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | CCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTATACCTCACTTCTGGTGGCAGTaGTGCAAAGTCCTTTTTATT | + |
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Preference number: 4 (lower is better) Translates to: PLTSDQPTRDFSEATSIPHFWWQ*CKVLFI Trigger: AATAAAAAGGACTTTGCACCACTGCCACCAGAAGTG...AGGTATACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | CCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTATACCTAGAGAACTCTTTCTATaGACACGAGAAGTACGGATG | + |
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Preference number: 4 (lower is better) Translates to: PLTSDQPTRDFSEATSIPRELFL*TREVRM Trigger: CATCCGTACTTCTCGTGTCCATAGAAAGAGTTCTCT...AGGTATACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR TCA 90 bp | AGTCTTCCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTATTACATCTTGTTTGTaGGTCCAAAGAAGGTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: SLPLTSDQPTRDFSEATSITSCL*VQRRSS Trigger: GCTTGACCTTCTTTGGACTCACAAACAAGATGTAAT...ACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGGAAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR GCA 90 bp | CCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTATACCTGGTCTCAGAGAAGGCTaGTCTTCTTTTAGATGTTTT | + |
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Preference number: 4 (lower is better) Translates to: PLTSDQPTRDFSEATSIPGLREG*SSFRCF Trigger: AAAACATCTAAAAGAAGAGCAGCCTTCTCTGAGACC...AGGTATACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR GCA 90 bp | CCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTATACCTGCTTTTAAAGGTTTTTaGCACTCAGGACTATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PLTSDQPTRDFSEATSIPAFKGF*HSGLSS Trigger: AGAAGATAGTCCTGAGTGGCAAAAACCTTTAAAAGC...AGGTATACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR GCA 90 bp | TTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTTGCCGGGTCCTGGACTaGCCCAGGGAATTTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: FSEATSIPNFIQILPELFCRVLD*PREFLV Trigger: AACAAGAAATTCCCTGGGGCAGTCCAGGACCCGGCA...AAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | TTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTGCACTAGCTGGCTCCTaGACAGCCAGGTTTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: FSEATSIPNFIQILPELFALAGS*TARFLS Trigger: AGACAGAAACCTGGCTGTCCAGGAGCCAGCTAGTGC...AAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | ATTTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATGGAGGTCATTTCTACTaGGCTCCACCAGAAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: ISQRQPVYLTSYKFSQNYGGHFY*APPEGG Trigger: GCCTCCTTCTGGTGGAGCCCAGTAGAAATGACCTCC...ATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTTATAAGGATTTTTCTGTGGTaGCTTGGAGGGGGTCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: QRQPVYLTSYKFSQNYFIRIFLW*LGGGLP Trigger: CGGCAGACCCCCTCCAAGTCACCACAGAAAAATCCT...TATAAAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR TCA 90 bp | ATTTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATAGCAGTTCTGCTGCATaGTTGGCTGTTGCCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: ISQRQPVYLTSYKFSQNYSSSAA*LAVAFW Trigger: CCAGAAGGCAACAGCCAATCATGCAGCAGAACTGCT...ATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTTATACACAGCCATGGTCTCTaGCATGGTTGGGTATGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QRQPVYLTSYKFSQNYFIHSHGL*HGWVWQ Trigger: CTGCCATACCCAACCATGTCAGAGACCATGGCTGTG...TATAAAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR GCA 90 bp | ATTTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATCTTCGCCAGCAGTTCTaGTGCATGATTGGCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: ISQRQPVYLTSYKFSQNYLRQQF*CMIGCC Trigger: GCAACAGCCAATCATGCAGCAGAACTGCTGGCGAAG...ATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | TTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTGTTCTGCTGCATGATTaGCTGTTGCCTTCTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: FSEATSIPNFIQILPELFVLLHD*LLPSGL Trigger: CAGGCCAGAAGGCAACAGCCAATCATGCAGCAGAAC...AAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | ATTTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATCCACGAGCAGTACAGTaGTTTCCTTCTGGGACCCTT | + |
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Preference number: 4 (lower is better) Translates to: ISQRQPVYLTSYKFSQNYPRAVQ*FPSGTL Trigger: AAGGGTCCCAGAAGGAAACCACTGTACTGCTCGTGG...ATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR TCA 90 bp | ATTTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTGGCCTGCCAACCCATaGGAAAGTTTGTCTGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: ISQRQPVYLTSYKFSQNYWPANP*ESLSGL Trigger: AAGACCAGACAAACTTTCTCATGGGTTGGCAGGCCA...ATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR GCA 90 bp | CAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTTATACCTTGGCCACAGAATTaGTTCGCCAGCAGTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QRQPVYLTSYKFSQNYFIPWPQN*FASSSA Trigger: AGCAGAACTGCTGGCGAAGCAATTCTGTGGCCAAGG...TATAAAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | ATTTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATACAGTGGTTTCCTTCTaGGACCCTTGGCCACAGAAT | + |
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Preference number: 4 (lower is better) Translates to: ISQRQPVYLTSYKFSQNYTVVSF*DPWPQN Trigger: ATTCTGTGGCCAAGGGTCCCAGAAGGAAACCACTGT...ATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTTATATCTCGGGAAGGTCCATaGTGTTGGCAATGGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QRQPVYLTSYKFSQNYFISREGP*CWQWSA Trigger: TGCTGACCATTGCCAACACCATGGACCTTCCCGAGA...TATAAAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR TCA 90 bp | ATTTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTCGAGTTTCCAAAGCTaGAGAGGGCTTGATTTCACG | + |
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Preference number: 4 (lower is better) Translates to: ISQRQPVYLTSYKFSQNYSSFQS*RGLDFT Trigger: CGTGAAATCAAGCCCTCTTCAGCTTTGGAAACTCGA...ATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR GCA 90 bp | CAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTTATAAACATCATCTGTTTCTaGTGCCTGCTGCAGACAGCG | + |
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Preference number: 4 (lower is better) Translates to: QRQPVYLTSYKFSQNYFINIICF*CLLQTA Trigger: CGCTGTCTGCAGCAGGCAGCAGAAACAGATGATGTT...TATAAAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR GCA 90 bp | TTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTTGCATGATTGGCTGTTaGCTTCTGGCCTGTCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: FSEATSIPNFIQILPELFCMIGC*LLACQF Trigger: AAACTGACAGGCCAGAAGGCAACAGCCAATCATGCA...AAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | TTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTCTCGTGCACATTTCTTaGGAGGAACTTCAGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: FSEATSIPNFIQILPELFLVHIS*EELQLH Trigger: ATGGAGCTGAAGTTCCTCCCAAGAAATGTGCACGAG...AAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR TCA 90 bp | ATTTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATGTCTCCTCACTTTTCTaGTCCACAGGAATCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: ISQRQPVYLTSYKFSQNYVSSLF*STGITS Trigger: AGAAGTGATTCCTGTGGATCAGAAAAGTGAGGAGAC...ATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR TCA 90 bp | ATTTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATGGAAGTGGAATGATTTaGTTTGATCCCTTTGACCTC | + |
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Preference number: 4 (lower is better) Translates to: ISQRQPVYLTSYKFSQNYGSGMI*FDPFDL Trigger: GAGGTCAAAGGGATCAAATCAAATCATTCCACTTCC...ATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | ATTTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATCAGGGAATTTCTTGTTaGGAGGGAGGAAATAAACTC | + |
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Preference number: 4 (lower is better) Translates to: ISQRQPVYLTSYKFSQNYQGISC*EGGNKL Trigger: GAGTTTATTTCCTCCCTCCCAACAAGAAATTCCCTG...ATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTTATATGTCCAACCTTGATGTaGATCTCAGAACCATCATTG | + |
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Preference number: 4 (lower is better) Translates to: QRQPVYLTSYKFSQNYFICPTLM*ISEPSL Trigger: CAATGATGGTTCTGAGATTCACATCAAGGTTGGACA...TATAAAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR TCA 90 bp | ATTTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTATTATCTTCCCCCTaGATCAATACAAACTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ISQRQPVYLTSYKFSQNYLLSSP*INTNCP Trigger: TGGACAGTTTGTATTGATTCAGGGGGAAGATAATAA...ATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR CCA 90 bp | TTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTGAACCACACTACTTTTaGCACAAAAAGGTTGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: FSEATSIPNFIQILPELFEPHYF*HKKVEF Trigger: AAACTCAACCTTTTTGTGCCAAAAGTAGTGTGGTTC...AAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS-3UTR GCA 90 bp | TTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTAGTTTCTTGTTCTTTTaGCTTCCTCCTAATGTATAC | + |
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Preference number: 4 (lower is better) Translates to: FSEATSIPNFIQILPELFSFLFF*LPPNVY Trigger: GTATACATTAGGAGGAAGGCAAAAGAACAAGAAACT...AAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS CCA 90 bp | GGCTCAGAGAGTCACCGCGTAGATGGGAAAGCTCGCAGATCTCCGTaGCACGCCTGCAGATGTCCAGGCAGCGCCGGGCATCTCCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: GSESHRVDGKARRSP*HACRCPGSAGHLQR Trigger: TCTCTGGAGATGCCCGGCGCTGCCTGGACATCTGCAGGCGTGCCACGGAGATCTGCGAGCTTTCCCATCTACGCGGTGACTCTCTGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS CCA 90 bp | AGCAGAAACATGCAACCTCAGCCGTGCCTCTTCCAGCGCACTAGCTaGCTCCTGGACAGCCAGGTTTCTGTCTCGGATCTGAGGAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: SRNMQPQPCLFQRTS*LLDSQVSVSDLRSG Trigger: GCCACTCCTCAGATCCGAGACAGAAACCTGGCTGTCCAGGAGCCAGCTAGTGCGCTGGAAGAGGCACGGCTGAGGTTGCATGTTTCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS CCA 90 bp | ATTAAGTGGGCCACAGTCACCAGGCTCAGAGAGTCACCGCGTAGATaGGAAAGCTCGCAGATCTCCGTGGCACGCCTGCAGATGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: IKWATVTRLRESPRR*ESSQISVARLQMSR Trigger: CCTGGACATCTGCAGGCGTGCCACGGAGATCTGCGAGCTTTCCCATCTACGCGGTGACTCTCTGAGCCTGGTGACTGTGGCCCACTTAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS CCA 90 bp | GGAGGGGGTCTGCCGGGTCCTGGACTGCCCCAGGGAATTTCTTGTTaGGAGGGAGGAAATAAACTCATCTTCCTCCTCACTCTCAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GGGLPGPGLPQGISC*EGGNKLIFLLTLRV Trigger: GACTCTGAGAGTGAGGAGGAAGATGAGTTTATTTCCTCCCTCCCAACAAGAAATTCCCTGGGGCAGTCCAGGACCCGGCAGACCCCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CCA 90 bp | GGGCATCTCCAGAGAGGGCTGCTACCTTCCTGGCCACCAGCTGGATaGCATCGTCCTCAAAGGCCCTTAAATTCCTCAGTCGAGACACTA | + |
|
Preference number: 5 (lower is better) Translates to: GHLQRGLLPSWPPAG*HRPQRPLNSSVETL Trigger: TAGTGTCTCGACTGAGGAATTTAAGGGCCTTTGAGGACGATGCCATCCAGCTGGTGGCCAGGAAGGTAGCAGCCCTCTCTGGAGATGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS-3UTR CAA 90 bp | CCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTATACCTCCCTTGGCCACAGAATaGCTTCGCCAGCAGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLTSDQPTRDFSEATSIPPLATE*LRQQFC Trigger: GCAGAACTGCTGGCGAAGCAATTCTGTGGCCAAGGG...AGGTATACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS GCA 90 bp | GGATTTTTCTGTGGTGACTTGGAGGGGGTCTGCCGGGTCCTGGACTaGCCCAGGGAATTTCTTGTTGGGAGGGAGGAAATAAACTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GFFCGDLEGVCRVLD*PREFLVGREEINSS Trigger: AGATGAGTTTATTTCCTCCCTCCCAACAAGAAATTCCCTGGGGCAGTCCAGGACCCGGCAGACCCCCTCCAAGTCACCACAGAAAAATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CCA 90 bp | CAAAGAAGGTCAAGCTCATCCACGAGCAGTACAGTGGTTTCCTTCTaGGACCCTTGGCCACAGAATTGCTTCGCCAGCAGTTCTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QRRSSSSTSSTVVSF*DPWPQNCFASSSAA Trigger: TGCAGCAGAACTGCTGGCGAAGCAATTCTGTGGCCAAGGGTCCCAGAAGGAAACCACTGTACTGCTCGTGGATGAGCTTGACCTTCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS-3UTR CAA 90 bp | AGTCTTCCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTACTCGTGCACATTTCTaGGGAGGAACTTCAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLPLTSDQPTRDFSEATSTRAHF*GGTSAP Trigger: TGGAGCTGAAGTTCCTCCCAAGAAATGTGCACGAGT...ACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGGAAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS-3UTR CAA 90 bp | AGTCTTCCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTATAGGGCTAAGTGTGTaGTCCACACCAAGCTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLPLTSDQPTRDFSEATSIGLSV*STPSFV Trigger: CACAAAGCTTGGTGTGGACAACACACTTAGCCCTAT...ACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGGAAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS GCA 90 bp | CCCATTAACCTCAACATATTGAAAGGGAGGAACATCATCTGTTTCTaGTGCCTGCTGCAGACAGCGTATGACCTCATGCACAGTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PINLNILKGRNIICF*CLLQTAYDLMHSGC Trigger: ACAGCCACTGTGCATGAGGTCATACGCTGTCTGCAGCAGGCAGCAGAAACAGATGATGTTCCTCCCTTTCAATATGTTGAGGTTAATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS TCA 90 bp | CATTTGTTGGAACTGTTTTCGATTCGGCAATGGCCTGCCAACCCATaGGAAAGTTTGTCTGGTCTTCTGCCTTGTGAGGTAGGATGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HLLELFSIRQWPANP*ESLSGLLPCEVGWH Trigger: ATGCCATCCTACCTCACAAGGCAGAAGACCAGACAAACTTTCTCATGGGTTGGCAGGCCATTGCCGAATCGAAAACAGTTCCAACAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CCA 90 bp | TCATCTTCCTCCTCACTCTCAGAGTCTACGGACTCTTCCTCTTCTTaGTCCCTGTCATCACCATCTAGAAGACAAAGCTGTTGCCTAATC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSLSESTDSSSS*SLSSPSRRQSCCLI Trigger: GATTAGGCAACAGCTTTGTCTTCTAGATGGTGATGACAGGGACCAAGAAGAGGAAGAGTCCGTAGACTCTGAGAGTGAGGAGGAAGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS GCA 90 bp | TCATACCAGAATATCTCCTGTGCAGGAGGACTGCGGCCTAACAAGTaGCTTTTAGAGACAGGAATCTCAAGGAATCTGACAAACCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SYQNISCAGGLRPNK*LLETGISRNLTNHC Trigger: ACAGTGGTTTGTCAGATTCCTTGAGATTCCTGTCTCTAAAAGGCACTTGTTAGGCCGCAGTCCTCCTGCACAGGAGATATTCTGGTATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS GCA 90 bp | ATTAACCTCAACATATTGAAAGGGAGGAACATCATCTGTTTCTGCTaGCTGCTGCAGACAGCGTATGACCTCATGCACAGTGGCTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: INLNILKGRNIICFC*LLQTAYDLMHSGCL Trigger: AAGACAGCCACTGTGCATGAGGTCATACGCTGTCTGCAGCAGGCAGCAGAAACAGATGATGTTCCTCCCTTTCAATATGTTGAGGTTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS-3UTR CAA 90 bp | AGTCTTCCTCTAACCTCTGACCAACCCACCAGGGATTTCTCAGAGGCAACCAGTTTTGATTTGATCCCTTaGACCTCTTGTTCTGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLPLTSDQPTRDFSEATSFDLIP*TSCSVV Trigger: CACAACAGAACAAGAGGTCAAAGGGATCAAATCAAA...ACTGGTTGCCTCTGAGAAATCCCTGGTGGGTTGGTCAGAGGTTAGAGGAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS GCA 90 bp | TCCTCTTCTTGGTCCCTGTCATCACCATCTAGAAGACAAAGCTGTTaGCTAATCCGCTTCAAAGTCAAGAGAGAACTCTTTCTATGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SSSWSLSSPSRRQSC*LIRFKVKRELFLWT Trigger: TGTCCATAGAAAGAGTTCTCTCTTGACTTTGAAGCGGATTAGGCAACAGCTTTGTCTTCTAGATGGTGATGACAGGGACCAAGAAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTTTCCTTCTGGGACCCTaGGCCACAGAATTGCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: FSEATSIPNFIQILPELFFLLGP*ATELLR Trigger: GCGAAGCAATTCTGTGGCCAAGGGTCCCAGAAGGAA...AAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS TCA 90 bp | AGAGAACTCTTTCTATGGACACGAGAAGTACGGATGGGTTCTTTGTaGGTTTCTTGTTCTTTTGCCTTCCTCCTAATGTATACTGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RELFLWTREVRMGSL*VSCSFAFLLMYTGV Trigger: GACACCAGTATACATTAGGAGGAAGGCAAAAGAACAAGAAACTCACAAAGAACCCATCCGTACTTCTCGTGTCCATAGAAAGAGTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATAATCTGCACATAGACTaGGTGGGGTTCTGTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ISQRQPVYLTSYKFSQNYNLHID*VGFCQL Trigger: AAGCTGACAGAACCCCACCAAGTCTATGTGCAGATT...ATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTGGCCAATCAAAGAGGTaGTACATTACATCTTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSEATSIPNFIQILPELFGQSKR*YITSCL Trigger: CAAACAAGATGTAATGTACAACCTCTTTGATTGGCC...AAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS-3UTR CAA 90 bp | CAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTTATATTCTCTGTACATTTGTaGGAACTGTTTTCGATTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QRQPVYLTSYKFSQNYFIFSVHL*ELFSIR Trigger: CCGAATCGAAAACAGTTCCAACAAATGTACAGAGAA...TATAAAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGAGGCAACCAGTATACCTAACTTCATACAAATTCTCCCAGAACTATTTACGACAGAAGAGTTTTaGATGGCAGTAATATATGAC | + |
|
Preference number: 5 (lower is better) Translates to: FSEATSIPNFIQILPELFTTEEF*MAVIYD Trigger: GTCATATATTACTGCCATCAAAAACTCTTCTGTCGT...AAATAGTTCTGGGAGAATTTGTATGAAGTTAGGTATACTGGTTGCCTCTGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CCA 72 bp | AGTCACCGCGTAGATGGGAAAGCTCGCAGATCTCCGTaGCACGCCTGCAGATGTCCAGGCAGCGCCGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SHRVDGKARRSP*HACRCPGSAGH Trigger: ATGCCCGGCGCTGCCTGGACATCTGCAGGCGTGCCACGGAGATCTGCGAGCTTTCCCATCTACGCGGTGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS GCA 72 bp | GTAGATGGGAAAGCTCGCAGATCTCCGTGGCACGCCTaGAGATGTCCAGGCAGCGCCGGGCATCTCCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VDGKARRSPWHA*RCPGSAGHLQR Trigger: TCTCTGGAGATGCCCGGCGCTGCCTGGACATCTGCAGGCGTGCCACGGAGATCTGCGAGCTTTCCCATCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CCA 72 bp | GCCACAGTCACCAGGCTCAGAGAGTCACCGCGTAGATaGGAAAGCTCGCAGATCTCCGTGGCACGCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ATVTRLRESPRR*ESSQISVARLQ Trigger: CTGCAGGCGTGCCACGGAGATCTGCGAGCTTTCCCATCTACGCGGTGACTCTCTGAGCCTGGTGACTGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CCA 72 bp | ATGCAACCTCAGCCGTGCCTCTTCCAGCGCACTAGCTaGCTCCTGGACAGCCAGGTTTCTGTCTCGGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: MQPQPCLFQRTS*LLDSQVSVSDL Trigger: CAGATCCGAGACAGAAACCTGGCTGTCCAGGAGCCAGCTAGTGCGCTGGAAGAGGCACGGCTGAGGTTGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS GCA 72 bp | TGTGGTGACTTGGAGGGGGTCTGCCGGGTCCTGGACTaGCCCAGGGAATTTCTTGTTGGGAGGGAGGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: CGDLEGVCRVLD*PREFLVGREEI Trigger: TATTTCCTCCCTCCCAACAAGAAATTCCCTGGGGCAGTCCAGGACCCGGCAGACCCCCTCCAAGTCACCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS GCA 72 bp | GGACCCTTGGCCACAGAATTGCTTCGCCAGCAGTTCTaGTGCATGATTGGCTGTTGCCTTCTGGCCTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPLATELLRQQF*CMIGCCLLACQ Trigger: CTGACAGGCCAGAAGGCAACAGCCAATCATGCAGCAGAACTGCTGGCGAAGCAATTCTGTGGCCAAGGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS CCA 72 bp | CAGAGAGGGCTGCTACCTTCCTGGCCACCAGCTGGATaGCATCGTCCTCAAAGGCCCTTAAATTCCTCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QRGLLPSWPPAG*HRPQRPLNSSV Trigger: GACTGAGGAATTTAAGGGCCTTTGAGGACGATGCCATCCAGCTGGTGGCCAGGAAGGTAGCAGCCCTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS CCA 72 bp | TCCACGAGCAGTACAGTGGTTTCCTTCTGGGACCCTTaGCCACAGAATTGCTTCGCCAGCAGTTCTGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: STSSTVVSFWDP*PQNCFASSSAA Trigger: TGCAGCAGAACTGCTGGCGAAGCAATTCTGTGGCCAAGGGTCCCAGAAGGAAACCACTGTACTGCTCGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CAA 72 bp | ATCCACGAGCAGTACAGTGGTTTCCTTCTGGGACCCTaGGCCACAGAATTGCTTCGCCAGCAGTTCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IHEQYSGFLLGP*ATELLRQQFCC Trigger: GCAGCAGAACTGCTGGCGAAGCAATTCTGTGGCCAAGGGTCCCAGAAGGAAACCACTGTACTGCTCGTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CAA 90 bp | CACGAGCAGTACAGTGGTTTCCTTCTGGGACCCTTGGCCACAGAATaGCTTCGCCAGCAGTTCTGCTGCATGATTGGCTGTTGCCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HEQYSGFLLGPLATE*LRQQFCCMIGCCLL Trigger: CAGAAGGCAACAGCCAATCATGCAGCAGAACTGCTGGCGAAGCAATTCTGTGGCCAAGGGTCCCAGAAGGAAACCACTGTACTGCTCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CAA 90 bp | GTCAAGCTCATCCACGAGCAGTACAGTGGTTTCCTTCTGGGACCCTaGGCCACAGAATTGCTTCGCCAGCAGTTCTGCTGCATGATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VKLIHEQYSGFLLGP*ATELLRQQFCCMIG Trigger: GCCAATCATGCAGCAGAACTGCTGGCGAAGCAATTCTGTGGCCAAGGGTCCCAGAAGGAAACCACTGTACTGCTCGTGGATGAGCTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CAA 72 bp | CGGTTCATCATGATCCTCTCGGGAAGGTCCATGGTGTaGGCAATGGTCAGCACTATCAAGTGGGCCCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RFIMILSGRSMV*AMVSTIKWAPL Trigger: CAAAGGGGCCCACTTGATAGTGCTGACCATTGCCAACACCATGGACCTTCCCGAGAGGATCATGATGAACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CAA 90 bp | GGCACCACTGAAGATCTCAACCCATTCCTGATAGGGCTAAGTGTGTaGTCCACACCAAGCTTTGTGGTCGTCATAGCTGGGTTCCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GTTEDLNPFLIGLSV*STPSFVVVIAGFRA Trigger: AGCCCGGAACCCAGCTATGACGACCACAAAGCTTGGTGTGGACAACACACTTAGCCCTATCAGGAATGGGTTGAGATCTTCAGTGGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CAA 72 bp | TACAGTGGTTTCCTTCTGGGACCCTTGGCCACAGAATaGCTTCGCCAGCAGTTCTGCTGCATGATTGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: YSGFLLGPLATE*LRQQFCCMIGC Trigger: ACAGCCAATCATGCAGCAGAACTGCTGGCGAAGCAATTCTGTGGCCAAGGGTCCCAGAAGGAAACCACTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CCA 72 bp | TCCAAAGAAGGTCAAGCTCATCCACGAGCAGTACAGTaGTTTCCTTCTGGGACCCTTGGCCACAGAATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SKEGQAHPRAVQ*FPSGTLGHRIA Trigger: AGCAATTCTGTGGCCAAGGGTCCCAGAAGGAAACCACTGTACTGCTCGTGGATGAGCTTGACCTTCTTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CCA 72 bp | GACGAGGAGAACATTTCATCTATAGCTTCCATTAAGTaGGCCACAGTCACCAGGCTCAGAGAGTCACCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: DEENISSIASIK*ATVTRLRESPR Trigger: ACGCGGTGACTCTCTGAGCCTGGTGACTGTGGCCCACTTAATGGAAGCTATAGATGAAATGTTCTCCTCGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS TCA 72 bp | GAACTGTTTTCGATTCGGCAATGGCCTGCCAACCCATaGGAAAGTTTGTCTGGTCTTCTGCCTTGTGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ELFSIRQWPANP*ESLSGLLPCEV Trigger: TACCTCACAAGGCAGAAGACCAGACAAACTTTCTCATGGGTTGGCAGGCCATTGCCGAATCGAAAACAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CCA 72 bp | TCCTCACTCTCAGAGTCTACGGACTCTTCCTCTTCTTaGTCCCTGTCATCACCATCTAGAAGACAAAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSLSESTDSSSS*SLSSPSRRQSC Trigger: ACAGCTTTGTCTTCTAGATGGTGATGACAGGGACCAAGAAGAGGAAGAGTCCGTAGACTCTGAGAGTGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CAA 90 bp | GGCCACAGAATTGCTTCGCCAGCAGTTCTGCTGCATGATTGGCTGTaGCCTTCTGGCCTGTCAGTTTCTTTAAAATCTGCACATAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: GHRIASPAVLLHDWL*PSGLSVSLKSAHRL Trigger: AAGTCTATGTGCAGATTTTAAAGAAACTGACAGGCCAGAAGGCAACAGCCAATCATGCAGCAGAACTGCTGGCGAAGCAATTCTGTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS TCA 72 bp | CAGGATAGCTTCACAAACAGTGTCTCCTCACTTTTCTaGTCCACAGGAATCACTTCTTCTGGGGCTAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: QDSFTNSVSSLF*STGITSSGANA Trigger: GGCATTAGCCCCAGAAGAAGTGATTCCTGTGGATCAGAAAAGTGAGGAGACACTGTTTGTGAAGCTATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS GCA 72 bp | ACATTTGTTGGAACTGTTTTCGATTCGGCAATGGCCTaGCAACCCATGAGAAAGTTTGTCTGGTCTTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TFVGTVFDSAMA*QPMRKFVWSSA Trigger: GGCAGAAGACCAGACAAACTTTCTCATGGGTTGGCAGGCCATTGCCGAATCGAAAACAGTTCCAACAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS GCA 72 bp | AATATCTCCTGTGCAGGAGGACTGCGGCCTAACAAGTaGCTTTTAGAGACAGGAATCTCAAGGAATCTGACA | + |
|
Preference number: 6 (lower is better) Translates to: NISCAGGLRPNK*LLETGISRNLT Trigger: TGTCAGATTCCTTGAGATTCCTGTCTCTAAAAGGCACTTGTTAGGCCGCAGTCCTCCTGCACAGGAGATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS GCA 72 bp | AACATATTGAAAGGGAGGAACATCATCTGTTTCTGCTaGCTGCTGCAGACAGCGTATGACCTCATGCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: NILKGRNIICFC*LLQTAYDLMHS Trigger: ACTGTGCATGAGGTCATACGCTGTCTGCAGCAGGCAGCAGAAACAGATGATGTTCCTCCCTTTCAATATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CAA 90 bp | CTTTCTATGGACACGAGAAGTACGGATGGGTTCTTTGTGAGTTTCTaGTTCTTTTGCCTTCCTCCTAATGTATACTGGTGTCAGACCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LSMDTRSTDGFFVSF*FFCLPPNVYWCQTP Trigger: GGGGGTCTGACACCAGTATACATTAGGAGGAAGGCAAAAGAACAAGAAACTCACAAAGAACCCATCCGTACTTCTCGTGTCCATAGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS TCA 72 bp | GGTTCTGTCAGCTTCATCCCATTAACCTCAACATATTaGAAGGGAGGAACATCATCTGTTTCTGCTGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSVSFIPLTSTY*KGGTSSVSAAC Trigger: GCAGGCAGCAGAAACAGATGATGTTCCTCCCTTTCAATATGTTGAGGTTAATGGGATGAAGCTGACAGAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS TCA 72 bp | TTGGCAATGGTCAGCACTATCAAGTGGGCCCCTTTGTaGGTAGGCCAATCAAAGAGGTTGTACATTACATCT | + |
|
Preference number: 6 (lower is better) Translates to: LAMVSTIKWAPL*VGQSKRLYITS Trigger: AGATGTAATGTACAACCTCTTTGATTGGCCTACTCACAAAGGGGCCCACTTGATAGTGCTGACCATTGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS GCA 72 bp | AGTACGGATGGGTTCTTTGTGAGTTTCTTGTTCTTTTaGCTTCCTCCTAATGTATACTGGTGTCAGACCCCC | + |
|
Preference number: 6 (lower is better) Translates to: STDGFFVSFLFF*LPPNVYWCQTP Trigger: GGGGGTCTGACACCAGTATACATTAGGAGGAAGGCAAAAGAACAAGAAACTCACAAAGAACCCATCCGTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS GCA 72 bp | AGGAATCTCAAGGAATCTGACAAACCACTGTACTCGTaGACATTTCTTGGGAGGAACTTCAGCTCCATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RNLKESDKPLYS*TFLGRNFSSIL Trigger: CAAAATGGAGCTGAAGTTCCTCCCAAGAAATGTGCACGAGTACAGTGGTTTGTCAGATTCCTTGAGATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
||
| CDS CCA 72 bp | AGAGAGAACTCTTTCTATGGACACGAGAAGTACGGATaGGTTCTTTGTGAGTTTCTTGTTCTTTTGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RENSFYGHEKYG*VLCEFLVLLPS Trigger: GGAAGGCAAAAGAACAAGAAACTCACAAAGAACCCATCCGTACTTCTCGTGTCCATAGAAAGAGTTCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS CAA 72 bp | GACACGAGAAGTACGGATGGGTTCTTTGTGAGTTTCTaGTTCTTTTGCCTTCCTCCTAATGTATACTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: DTRSTDGFFVSF*FFCLPPNVYWC Trigger: ACACCAGTATACATTAGGAGGAAGGCAAAAGAACAAGAAACTCACAAAGAACCCATCCGTACTTCTCGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS CAA 72 bp | CCATTTTTAACTCGAGTTTCCAAAGCTGAAGAGGGCTaGATTTCACGAGGTTTATTAGGCTTTTTAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: PFLTRVSKAEEG*ISRGLLGFLGG Trigger: GCCTCCTAAAAAGCCTAATAAACCTCGTGAAATCAAGCCCTCTTCAGCTTTGGAAACTCGAGTTAAAAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS CAA 90 bp | GCAATAATGGCTCTCAGGAAGCTCTGTTCCACGACAGAAGAGTTTTaGATGGCAGTAATATATGACGAGGAGAACATTTCATCTATAGCT | + |
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Preference number: 6 (lower is better) Translates to: AIMALRKLCSTTEEF*MAVIYDEENISSIA Trigger: AGCTATAGATGAAATGTTCTCCTCGTCATATATTACTGCCATCAAAAACTCTTCTGTCGTGGAACAGAGCTTCCTGAGAGCCATTATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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| CDS TCA 72 bp | TTGAGTTTGTCCATTTTTAACTCGAGTTTCCAAAGCTaGAGAGGGCTTGATTTCACGAGGTTTATTAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LSLSIFNSSFQS*RGLDFTRFIRL Trigger: AAGCCTAATAAACCTCGTGAAATCAAGCCCTCTTCAGCTTTGGAAACTCGAGTTAAAAATGGACAAACTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102744.4 |
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