Pregenerated sensors for ORAI3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043964Ensembl transcript IDs: ENSMUST00000061587.13, ENSMUST00000118865.8, ENSMUST00000121504.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGCTGGGCAGGTACTTGGCCTCTACCTCAGAGCTTACAGGAGGTaGCTCCAGCCTAGGGCAAGGAAGGAGGTCTGTCGATCCCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: AAGQVLGLYLRAYRR*LQPRARKEVCRSLG Trigger: CCCCAGGGATCGACAGACCTCCTTCCTTGCCCTAGGCTGGAGCCACCTCCTGTAAGCTCTGAGGTAGAGGCCAAGTACCTGCCCAGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR CCA 90 bp | CACAGGTACCATGATTGCCGTGGAGGCCATAGCTGCCTGCCAGCCTaGTCCATGAGCACTATCACACACTTGCCGGGGTGGACAGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: HRYHDCRGGHSCLPA*SMSTITHLPGWTGF Trigger: AAAGCCTGTCCACCCCGGCAAGTGTGTGATAGTGCTCATGGACCAGGCTGGCAGGCAGCTATGGCCTCCACGGCAATCATGGTACCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR CCA 90 bp | GGAGACAGTCACAGGTGGCACCTGGGACATAGGTACAACAGGAGCTaGTTTACCCATGGGTGCCCCAATGGGCACAAACTTGACCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: GDSHRWHLGHRYNRS*FTHGCPNGHKLDPA Trigger: GGCTGGGTCAAGTTTGTGCCCATTGGGGCACCCATGGGTAAACCAGCTCCTGTTGTACCTATGTCCCAGGTGCCACCTGTGACTGTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR GCA 90 bp | AGGGCAAGGAAGGAGGTCTGTCGATCCCTGGGGTTTCTGAGGCAATaGTTGCAACAGTCTAAAGCCAGGCTTACACAGCCTGCAGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: RARKEVCRSLGFLRQ*LQQSKARLTQPAAP Trigger: GGGAGCTGCAGGCTGTGTAAGCCTGGCTTTAGACTGTTGCAAGCATTGCCTCAGAAACCCCAGGGATCGACAGACCTCCTTCCTTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR CCA 90 bp | GCTGCACAATCTCCCACTCGTCAATACTTCCTCCTCTCCCAGTTCTaGCCAGACAGTCAGTGCCTAGGGCAGTGGAACGACCACCACAAG | + |
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Preference number: 1 (lower is better) Translates to: AAQSPTRQYFLLSQF*PDSQCLGQWNDHHK Trigger: CTTGTGGTGGTCGTTCCACTGCCCTAGGCACTGACTGTCTGGCCAGAACTGGGAGAGGAGGAAGTATTGACGAGTGGGAGATTGTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR CCA 90 bp | ACTCAGTGTCAGGTGGTGGTGGTGCATGCCTTTAATCCCTGTACATaGGAGGCAGAGGCAGGTACATCTCTGAGCTCAAGGCCAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: TQCQVVVVHAFNPCT*EAEAGTSLSSRPAW Trigger: CCAGGCTGGCCTTGAGCTCAGAGATGTACCTGCCTCTGCCTCCCATGTACAGGGATTAAAGGCATGCACCACCACCACCTGACACTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR TCA 90 bp | TCCAGCCTAGGGCAAGGAAGGAGGTCTGTCGATCCCTGGGGTTTCTaGGGCAATGCTTGCAACAGTCTAAAGCCAGGCTTACACAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: SSLGQGRRSVDPWGF*GNACNSLKPGLHSL Trigger: CAGGCTGTGTAAGCCTGGCTTTAGACTGTTGCAAGCATTGCCTCAGAAACCCCAGGGATCGACAGACCTCCTTCCTTGCCCTAGGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR GCA 90 bp | AGGACAGTTGTGCAGACATGTCACCTTCCTGGAGGAGCAAACAACTaGTCAGCACCACCAGGGATCTCACTAAGGCAGGCGGGCCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: RTVVQTCHLPGGANN*SAPPGISLRQAGLF Trigger: AAAGAGGCCCGCCTGCCTTAGTGAGATCCCTGGTGGTGCTGAGCAGTTGTTTGCTCCTCCAGGAAGGTGACATGTCTGCACAACTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR GCA 90 bp | TGGCACCTGGGACATAGGTACAACAGGAGCTGGTTTACCCATGGGTaGCCCAATGGGCACAAACTTGACCCAGCCCACCAGAACAACTTC | + |
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Preference number: 1 (lower is better) Translates to: WHLGHRYNRSWFTHG*PNGHKLDPAHQNNF Trigger: GAAGTTGTTCTGGTGGGCTGGGTCAAGTTTGTGCCCATTGGGGCACCCATGGGTAAACCAGCTCCTGTTGTACCTATGTCCCAGGTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR TCA 90 bp | GGCAGGCGGGCCTCTTTCCTCTCATTTAACCCAGGATCCTTAGGCTaGAACAGTTCCCCAAGCAGAGCAGAATTTACAAAACCCACCAGA | + |
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Preference number: 1 (lower is better) Translates to: GRRASFLSFNPGSLG*NSSPSRAEFTKPTR Trigger: TCTGGTGGGTTTTGTAAATTCTGCTCTGCTTGGGGAACTGTTTCAGCCTAAGGATCCTGGGTTAAATGAGAGGAAAGAGGCCCGCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR CAA 90 bp | GACAGGGATCATCCCTGGGAGTGTGGGATGCTGCTGGGCAGGTACTaGGCCTCTACCTCAGAGCTTACAGGAGGTGGCTCCAGCCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: DRDHPWECGMLLGRY*ASTSELTGGGSSLG Trigger: CCCTAGGCTGGAGCCACCTCCTGTAAGCTCTGAGGTAGAGGCCAAGTACCTGCCCAGCAGCATCCCACACTCCCAGGGATGATCCCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGTGGTGGTGGTGCATGCCTTTAATCCCTGTACATGGGAGGCAGAGGCAGGTCAGGCTTACACAGCCTaGAGCTCCCCCTGCAGGCGA | + |
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Preference number: 2 (lower is better) Translates to: QVVVVHAFNPCTWEAEAGQAYTA*SSPCRR Trigger: TCGCCTGCAGGGGGAGCTGCAGGCTGTGTAAGCCTG...ACCTGCCTCTGCCTCCCATGTACAGGGATTAAAGGCATGCACCACCACCACCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGATGCTGCTGGGCAGGTACTTGGCCTCTACCTCAGAGCTTACAGGAGGTGGAGAGCTTACAGGAGGTaGCTCCAGCCTAGGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: WDAAGQVLGLYLRAYRRWRAYRR*LQPRAR Trigger: CCTTGCCCTAGGCTGGAGCCACCTCCTGTAAGCTCT...CCACCTCCTGTAAGCTCTGAGGTAGAGGCCAAGTACCTGCCCAGCAGCATCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR CAA 90 bp | GCAAGGAAGGAGGTCTGTCGATCCCTGGGGTTTCTGAGGCAATGCTaGCAACAGTCTAAAGCCAGGCTTACACAGCCTGCAGCTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: ARKEVCRSLGFLRQC*QQSKARLTQPAAPP Trigger: AGGGGGAGCTGCAGGCTGTGTAAGCCTGGCTTTAGACTGTTGCAAGCATTGCCTCAGAAACCCCAGGGATCGACAGACCTCCTTCCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR-3UTR GCA 90 bp | CATGCCTTTAATCCCTGTACATGGGAGGCAGAGGCAGGTACATCTCTGAGCTCATGGCCAGACAGTCAGTaGCTAGGGCAGTGGAACGAC | + |
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Preference number: 2 (lower is better) Translates to: HAFNPCTWEAEAGTSLSSWPDSQ*LGQWND Trigger: GTCGTTCCACTGCCCTAGGCACTGACTGTCTGGCCA...TGAGCTCAGAGATGTACCTGCCTCTGCCTCCCATGTACAGGGATTAAAGGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCATGCCTTTAATCCCTGTACATGGGAGGCAGAGGCAGGTACATCTCTGAGCCTCCTCTCCCAGTTCTaGCCAGACAGTCAGTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: VHAFNPCTWEAEAGTSLSLLSQF*PDSQCL Trigger: TAGGCACTGACTGTCTGGCCAGAACTGGGAGAGGAG...GCTCAGAGATGTACCTGCCTCTGCCTCCCATGTACAGGGATTAAAGGCATGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCTGGAGGAGCAAACAACTGCTCAGCACCACCAGGGATCTCACTAAGGCACGTTGGTGTGGTGACTaGTGGACAGAGTTGAGATTG | + |
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Preference number: 2 (lower is better) Translates to: PSWRSKQLLSTTRDLTKARWCGD*WTELRL Trigger: CAATCTCAACTCTGTCCACCAGTCACCACACCAACG...TGCCTTAGTGAGATCCCTGGTGGTGCTGAGCAGTTGTTTGCTCCTCCAGGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGATTATACAGATAAGCAAGGGCTGATTGCCTTGAGGACAGTTGTGCAGACACCTGGGAGTGTGGGATaGTGCTGGGCAGGTACTTGG | + |
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Preference number: 2 (lower is better) Translates to: ADYTDKQGLIALRTVVQTPGSVG*CWAGTW Trigger: CCAAGTACCTGCCCAGCAGCATCCCACACTCCCAGG...TGTCTGCACAACTGTCCTCAAGGCAATCAGCCCTTGCTTATCTGTATAATCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTGCATTCTAAGGGCTGAATCTTCTCCCTTACCAACTCACCAACCCTTGTCAGGTGCAGGCACTAAATaGCACCAGCAGGCCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: FCILRAESSPLPTHQPLSGAGTK*HQQAWW Trigger: CCACCAGGCCTGCTGGTGGCATTTAGTGCCTGCACC...TGACAAGGGTTGGTGAGTTGGTAAGGGAGAAGATTCAGCCCTTAGAATGCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR-3UTR GCA 90 bp | AACAACTGCTCAGCACCACCAGGGATCTCACTAAGGCAGGCGGGCCTCTTTCCTTCTGAAGAAGAGTTCTaGATTCTAAGGGCTGAATCT | + |
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Preference number: 2 (lower is better) Translates to: NNCSAPPGISLRQAGLFPSEEEF*ILRAES Trigger: AGATTCAGCCCTTAGAATGCAGAACTCTTCTTCAGA...AGGAAAGAGGCCCGCCTGCCTTAGTGAGATCCCTGGTGGTGCTGAGCAGTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR CAA 90 bp | GCCAACTGCAAAGCAGATTATACAGATAAGCAAGGGCTGATTGCCTaGAGGACAGTTGTGCAGACATGTCACCTTCCTGGAGGAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: ANCKADYTDKQGLIA*RTVVQTCHLPGGAN Trigger: GTTTGCTCCTCCAGGAAGGTGACATGTCTGCACAACTGTCCTCAAGGCAATCAGCCCTTGCTTATCTGTATAATCTGCTTTGCAGTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR-3UTR GCA 90 bp | CTCATACCATCTATCAAGCATATTACCTCCATCTGGCCCTTAGGAACAAAGAACTGGCCAGACAGTCAGTaGCTAGGGCAGTGGAACGAC | + |
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Preference number: 2 (lower is better) Translates to: LIPSIKHITSIWPLGTKNWPDSQ*LGQWND Trigger: GTCGTTCCACTGCCCTAGGCACTGACTGTCTGGCCA...GTTCTTTGTTCCTAAGGGCCAGATGGAGGTAATATGCTTGATAGATGGTATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR-3UTR TCA 90 bp | ATCAAGCATATTACCTCCATCTGGCCCTTAGGAACAAAGAACCATACCCAAGGTCCAGGATCCTTAGGCTaGAACAGTTCCCCAAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: IKHITSIWPLGTKNHTQGPGSLG*NSSPSR Trigger: TCTGCTTGGGGAACTGTTTCAGCCTAAGGATCCTGG...ACCTTGGGTATGGTTCTTTGTTCCTAAGGGCCAGATGGAGGTAATATGCTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR-3UTR GCA 90 bp | CATGCCTTTAATCCCTGTACATGGGAGGCAGAGGCAGGTACATCTCTGAGCTCATCCCAGGATGCCAACTaGAAAGCAGATTATACAGAT | + |
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Preference number: 2 (lower is better) Translates to: HAFNPCTWEAEAGTSLSSSQDAN*KADYTD Trigger: ATCTGTATAATCTGCTTTGCAGTTGGCATCCTGGGA...TGAGCTCAGAGATGTACCTGCCTCTGCCTCCCATGTACAGGGATTAAAGGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR-3UTR GCA 90 bp | TGCATTCTAAGGGCTGAATCTTCTCCCTTACCAACTCACCAACCCTTGTCAAGTCCCTTGTCAAGTAGCTaGACAATCTCCCACTCGTCA | + |
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Preference number: 2 (lower is better) Translates to: CILRAESSPLPTHQPLSSPLSSS*TISHSS Trigger: TGACGAGTGGGAGATTGTGCAGCTACTTGACAAGGG...ACTTGACAAGGGTTGGTGAGTTGGTAAGGGAGAAGATTCAGCCCTTAGAATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR-3UTR CCA 90 bp | TGCATTCTAAGGGCTGAATCTTCTCCCTTACCAACTCACCAACCCTTGTCAAGTTGGTGTGGTGACTGGTaGACAGAGTTGAGATTGTGG | + |
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Preference number: 2 (lower is better) Translates to: CILRAESSPLPTHQPLSSWCGDW*TELRLW Trigger: CCACAATCTCAACTCTGTCCACCAGTCACCACACCA...ACTTGACAAGGGTTGGTGAGTTGGTAAGGGAGAAGATTCAGCCCTTAGAATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR-3UTR TCA 90 bp | ATCAAGCATATTACCTCCATCTGGCCCTTAGGAACAAAGAACCATACCCAAGGTACTGGTGGACAGAGTTaGGATTGTGGATGTTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: IKHITSIWPLGTKNHTQGTGGQS*DCGCCS Trigger: TGAGCAACATCCACAATCTCAACTCTGTCCACCAGT...ACCTTGGGTATGGTTCTTTGTTCCTAAGGGCCAGATGGAGGTAATATGCTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTATCAAGCATATTACCTCCATCTGGCCCTTAGGAACAAAGAACCATACCCAAGTGTCAGGTGGTGGTaGTGCATGCCTTTAATCCCT | + |
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Preference number: 2 (lower is better) Translates to: IYQAYYLHLALRNKEPYPSVRWW*CMPLIP Trigger: AGGGATTAAAGGCATGCACCACCACCACCTGACACT...TGGGTATGGTTCTTTGTTCCTAAGGGCCAGATGGAGGTAATATGCTTGATAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAAGCATATTACCTCCATCTGGCCCTTAGGAACAAAGAACCATACCCAAGGTAAACTCAGTGTCAGGTaGTGGTGGTGCATGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: IKHITSIWPLGTKNHTQGKLSVR*WWCMPL Trigger: TAAAGGCATGCACCACCACCACCTGACACTGAGTTT...ACCTTGGGTATGGTTCTTTGTTCCTAAGGGCCAGATGGAGGTAATATGCTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR-3UTR GCA 90 bp | TGGACTCATACCATCTATCAAGCATATTACCTCCATCTGGCCCTTAGGAACAAAAAATCTCTCCCAGGATaGCAACTGCAAAGCAGATTA | + |
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Preference number: 2 (lower is better) Translates to: WTHTIYQAYYLHLALRNKKSLPG*QLQSRL Trigger: TAATCTGCTTTGCAGTTGGCATCCTGGGAGAGATTT...TTTGTTCCTAAGGGCCAGATGGAGGTAATATGCTTGATAGATGGTATGAGTCCA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR CCA 72 bp | CATGATTGCCGTGGAGGCCATAGCTGCCTGCCAGCCTaGTCCATGAGCACTATCACACACTTGCCGGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: HDCRGGHSCLPA*SMSTITHLPGW Trigger: CCACCCCGGCAAGTGTGTGATAGTGCTCATGGACCAGGCTGGCAGGCAGCTATGGCCTCCACGGCAATCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR CCA 72 bp | ATCCCTGGGAGTGTGGGATGCTGCTGGGCAGGTACTTaGCCTCTACCTCAGAGCTTACAGGAGGTGGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: IPGSVGCCWAGT*PLPQSLQEVAP Trigger: TGGAGCCACCTCCTGTAAGCTCTGAGGTAGAGGCCAAGTACCTGCCCAGCAGCATCCCACACTCCCAGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR CCA 72 bp | CAGGTACTTGGCCTCTACCTCAGAGCTTACAGGAGGTaGCTCCAGCCTAGGGCAAGGAAGGAGGTCTGTCGA | + |
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Preference number: 3 (lower is better) Translates to: QVLGLYLRAYRR*LQPRARKEVCR Trigger: TCGACAGACCTCCTTCCTTGCCCTAGGCTGGAGCCACCTCCTGTAAGCTCTGAGGTAGAGGCCAAGTACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGCAGAGGCAGGTACATCTCTGAGCTCAAGGCCAGCCTGGTCTACAGAGAGTCCAATGGGCACAAACTaGACCCAGCCCACCAGAACA | + |
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Preference number: 3 (lower is better) Translates to: EAEAGTSLSSRPAWSTESPMGTN*TQPTRT Trigger: TGTTCTGGTGGGCTGGGTCAAGTTTGTGCCCATTGG...ACTCTCTGTAGACCAGGCTGGCCTTGAGCTCAGAGATGTACCTGCCTCTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR GCA 72 bp | AACATGATGACAGGGATCATCCCTGGGAGTGTGGGATaGTGCTGGGCAGGTACTTGGCCTCTACCTCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: NMMTGIIPGSVG*CWAGTWPLPQS Trigger: GCTCTGAGGTAGAGGCCAAGTACCTGCCCAGCAGCATCCCACACTCCCAGGGATGATCCCTGTCATCATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR GCA 72 bp | GTGCAGACATGTCACCTTCCTGGAGGAGCAAACAACTaGTCAGCACCACCAGGGATCTCACTAAGGCAGGCG | + |
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Preference number: 3 (lower is better) Translates to: VQTCHLPGGANN*SAPPGISLRQA Trigger: CGCCTGCCTTAGTGAGATCCCTGGTGGTGCTGAGCAGTTGTTTGCTCCTCCAGGAAGGTGACATGTCTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR GCA 72 bp | TACTTCCTCCTCTCCCAGTTCTGGCCAGACAGTCAGTaGCTAGGGCAGTGGAACGACCACCACAAGTCACCA | + |
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Preference number: 3 (lower is better) Translates to: YFLLSQFWPDSQ*LGQWNDHHKSP Trigger: TGGTGACTTGTGGTGGTCGTTCCACTGCCCTAGGCACTGACTGTCTGGCCAGAACTGGGAGAGGAGGAAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR GCA 72 bp | GCAGTAGAGAAGCCCCAGGCAAGCTCCACGTATCTGTaGAGTCGTTGGTGTGGTGACTGGTGGACAGAGTTG | + |
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Preference number: 3 (lower is better) Translates to: AVEKPQASSTYL*SRWCGDWWTEL Trigger: CAACTCTGTCCACCAGTCACCACACCAACGACTGCACAGATACGTGGAGCTTGCCTGGGGCTTCTCTACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR GCA 72 bp | GGACATAGGTACAACAGGAGCTGGTTTACCCATGGGTaGCCCAATGGGCACAAACTTGACCCAGCCCACCAG | + |
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Preference number: 3 (lower is better) Translates to: GHRYNRSWFTHG*PNGHKLDPAHQ Trigger: CTGGTGGGCTGGGTCAAGTTTGTGCCCATTGGGGCACCCATGGGTAAACCAGCTCCTGTTGTACCTATGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR CCA 72 bp | ATGACAGGGATCATCCCTGGGAGTGTGGGATGCTGCTaGGCAGGTACTTGGCCTCTACCTCAGAGCTTACAG | + |
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Preference number: 3 (lower is better) Translates to: MTGIIPGSVGCC*AGTWPLPQSLQ Trigger: CTGTAAGCTCTGAGGTAGAGGCCAAGTACCTGCCCAGCAGCATCCCACACTCCCAGGGATGATCCCTGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR CCA 72 bp | CAAAACCCACCAGAACATGATGACAGGGATCATCCCTaGGAGTGTGGGATGCTGCTGGGCAGGTACTTGGCC | + |
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Preference number: 3 (lower is better) Translates to: QNPPEHDDRDHP*ECGMLLGRYLA Trigger: GGCCAAGTACCTGCCCAGCAGCATCCCACACTCCCAGGGATGATCCCTGTCATCATGTTCTGGTGGGTTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR CCA 72 bp | TCTCCCACTCGTCAATACTTCCTCCTCTCCCAGTTCTaGCCAGACAGTCAGTGCCTAGGGCAGTGGAACGAC | + |
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Preference number: 3 (lower is better) Translates to: SPTRQYFLLSQF*PDSQCLGQWND Trigger: GTCGTTCCACTGCCCTAGGCACTGACTGTCTGGCCAGAACTGGGAGAGGAGGAAGTATTGACGAGTGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR GCA 72 bp | ATGATGACAGGGATCATCCCTGGGAGTGTGGGATGCTaGTGGGCAGGTACTTGGCCTCTACCTCAGAGCTTA | + |
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Preference number: 3 (lower is better) Translates to: MMTGIIPGSVGC*WAGTWPLPQSL Trigger: TAAGCTCTGAGGTAGAGGCCAAGTACCTGCCCAGCAGCATCCCACACTCCCAGGGATGATCCCTGTCATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR CCA 72 bp | CACAGGTGGCACCTGGGACATAGGTACAACAGGAGCTaGTTTACCCATGGGTGCCCCAATGGGCACAAACTT | + |
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Preference number: 3 (lower is better) Translates to: HRWHLGHRYNRS*FTHGCPNGHKL Trigger: AAGTTTGTGCCCATTGGGGCACCCATGGGTAAACCAGCTCCTGTTGTACCTATGTCCCAGGTGCCACCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR-3UTR CAA 90 bp | TTTAATCCCTGTACATGGGAGGCAGAGGCAGGTACATCTCTGAGCTCAAGGCCATTGTGGCGGTCTGTCTaGTGGGCAACCAAGGATCGG | + |
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Preference number: 3 (lower is better) Translates to: FNPCTWEAEAGTSLSSRPLWRSV*WATKDR Trigger: CCGATCCTTGGTTGCCCACAAGACAGACCGCCACAA...TGGCCTTGAGCTCAGAGATGTACCTGCCTCTGCCTCCCATGTACAGGGATTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR TCA 72 bp | GGGCAAGGAAGGAGGTCTGTCGATCCCTGGGGTTTCTaGGGCAATGCTTGCAACAGTCTAAAGCCAGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GQGRRSVDPWGF*GNACNSLKPGL Trigger: TAAGCCTGGCTTTAGACTGTTGCAAGCATTGCCTCAGAAACCCCAGGGATCGACAGACCTCCTTCCTTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR GCA 72 bp | AAGGAGGTCTGTCGATCCCTGGGGTTTCTGAGGCAATaGTTGCAACAGTCTAAAGCCAGGCTTACACAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: KEVCRSLGFLRQ*LQQSKARLTQP Trigger: AGGCTGTGTAAGCCTGGCTTTAGACTGTTGCAAGCATTGCCTCAGAAACCCCAGGGATCGACAGACCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGGGCAAAGGCCATAAACACTAGTCCCACAGGTACCATGATTGCCGTGGAGGACTGGTGGACAGAGTaGAGATTGTGGATGTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: CRAKAINTSPTGTMIAVEDWWTE*RLWMLL Trigger: GAGCAACATCCACAATCTCAACTCTGTCCACCAGTC...CTCCACGGCAATCATGGTACCTGTGGGACTAGTGTTTATGGCCTTTGCCCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
||
| 3UTR GCA 72 bp | AAGGTGCATCAAAAACTCAGTGTCAGGTGGTGGTGGTaGATGCCTTTAATCCCTGTACATGGGAGGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KVHQKLSVRWWW*MPLIPVHGRQR Trigger: CCTCTGCCTCCCATGTACAGGGATTAAAGGCATGCACCACCACCACCTGACACTGAGTTTTTGATGCACCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| 3UTR CCA 72 bp | GAAGCTAAACTAAGGGAGACAGTCACAGGTGGCACCTaGGACATAGGTACAACAGGAGCTGGTTTACCCATG | + |
|
Preference number: 3 (lower is better) Translates to: EAKLRETVTGGT*DIGTTGAGLPM Trigger: CATGGGTAAACCAGCTCCTGTTGTACCTATGTCCCAGGTGCCACCTGTGACTGTCTCCCTTAGTTTAGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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| 3UTR GCA 72 bp | TCTCCCTTACCAACTCACCAACCCTTGTCAAGTAGCTaGACAATCTCCCACTCGTCAATACTTCCTCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SPLPTHQPLSSS*TISHSSILPPL Trigger: GAGAGGAGGAAGTATTGACGAGTGGGAGATTGTGCAGCTACTTGACAAGGGTTGGTGAGTTGGTAAGGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
||
| 3UTR CCA 72 bp | AACAAGGTGCATCAAAAACTCAGTGTCAGGTGGTGGTaGTGCATGCCTTTAATCCCTGTACATGGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: NKVHQKLSVRWW*CMPLIPVHGRQ Trigger: CTGCCTCCCATGTACAGGGATTAAAGGCATGCACCACCACCACCTGACACTGAGTTTTTGATGCACCTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| CDS-3UTR TCA 90 bp | TGGGATGCTGCTGGGCAGGTACTTGGCCTCTACCTCAGAGCTTACAGGAGGTGGAGAGGCGGCGCCAGCTaGGCGCCCGCAGAGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WDAAGQVLGLYLRAYRRWRGGAS*APAESA Trigger: AGCACTCTCTGCGGGCGCTCAGCTGGCGCCGCCTCT...CCACCTCCTGTAAGCTCTGAGGTAGAGGCCAAGTACCTGCCCAGCAGCATCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGCAGGTACTTGGCCTCTACCTCAGAGCTTACAGGAGGTGGCTCCAGCCCGAACTCCCGGTACGTaGCTGAGCCCGCGGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CWAGTWPLPQSLQEVAPARTPGT*LSPRGC Trigger: ACAGCCCCGCGGGCTCAGCCACGTACCGGGAGTTCG...GGCTGGAGCCACCTCCTGTAAGCTCTGAGGTAGAGGCCAAGTACCTGCCCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| CDS-3UTR TCA 90 bp | CTCCCTTACCAACTCACCAACCCTTGTCAAGTAGCTGCACAATCTCCCACTCGTCTCCCGGTACGTGGCTaGGCCCGCGGGGCTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPYQLTNPCQVAAQSPTRLPVRG*ARGAVH Trigger: GTGGACAGCCCCGCGGGCTCAGCCACGTACCGGGAG...ACGAGTGGGAGATTGTGCAGCTACTTGACAAGGGTTGGTGAGTTGGTAAGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
||
| 3UTR CAA 72 bp | CATCCCTGGGAGTGTGGGATGCTGCTGGGCAGGTACTaGGCCTCTACCTCAGAGCTTACAGGAGGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPWECGMLLGRY*ASTSELTGGGS Trigger: GGAGCCACCTCCTGTAAGCTCTGAGGTAGAGGCCAAGTACCTGCCCAGCAGCATCCCACACTCCCAGGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCCTGGAGGAGCAAACAACTGCTCAGCACCACCAGGGATCTCACTAAGGCAGCCCGCAGAGAGTGCTaGCTGGCCCCCATAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSWRSKQLLSTTRDLTKAARREC*LAPIRS Trigger: GGACCTTATGGGGGCCAGTCAGCACTCTCTGCGGGC...TGCCTTAGTGAGATCCCTGGTGGTGCTGAGCAGTTGTTTGCTCCTCCAGGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
||
| CDS-3UTR GCA 90 bp | AACAACTGCTCAGCACCACCAGGGATCTCACTAAGGCAGGCGGGCCTCTTTCCTGGTGCAGGCACTAAATaGCACCAGCAGGCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NNCSAPPGISLRQAGLFPGAGTK*HQQAWW Trigger: CCACCAGGCCTGCTGGTGGCATTTAGTGCCTGCACC...AGGAAAGAGGCCCGCCTGCCTTAGTGAGATCCCTGGTGGTGCTGAGCAGTTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR CCA 90 bp | AGGGCTGAATCTTCTCCCTTACCAACTCACCAACCCTTGTCAAGTAGCTGCACACGAACTCCCGGTACGTaGCTGAGCCCGCGGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RAESSPLPTHQPLSSSCTRTPGT*LSPRGC Trigger: ACAGCCCCGCGGGCTCAGCCACGTACCGGGAGTTCG...TGTGCAGCTACTTGACAAGGGTTGGTGAGTTGGTAAGGGAGAAGATTCAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
||
| CDS-3UTR CCA 90 bp | GACAGTTGTGCAGACATGTCACCTTCCTGGAGGAGCAAACAACTGCTCAGCACCGCTGTACCTCCACCATaGCCACCATGGCGAAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DSCADMSPSWRSKQLLSTAVPPP*PPWRSP Trigger: CGGGCTTCGCCATGGTGGCCATGGTGGAGGTACAGC...GGTGCTGAGCAGTTGTTTGCTCCTCCAGGAAGGTGACATGTCTGCACAACTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR CCA 90 bp | AACAACTGCTCAGCACCACCAGGGATCTCACTAAGGCAGGCGGGCCTCTTTCCTTCCAGCTCCTGCTTGTaGCGGTCTGTCTTGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NNCSAPPGISLRQAGLFPSSSCL*RSVLWA Trigger: TGCCCACAAGACAGACCGCCACAAGCAGGAGCTGGA...AGGAAAGAGGCCCGCCTGCCTTAGTGAGATCCCTGGTGGTGCTGAGCAGTTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| 3UTR CAA 72 bp | GCTGGTTTACCCATGGGTGCCCCAATGGGCACAAACTaGACCCAGCCCACCAGAACAACTTCAGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGLPMGAPMGTN*TQPTRTTSARK Trigger: CTTCCTGGCTGAAGTTGTTCTGGTGGGCTGGGTCAAGTTTGTGCCCATTGGGGCACCCATGGGTAAACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
||
| CDS-3UTR TCA 90 bp | TGGACTCATACCATCTATCAAGCATATTACCTCCATCTGGCCCTTAGGAACAAACTCCCGGTACGTGGCTaGGCCCGCGGGGCTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WTHTIYQAYYLHLALRNKLPVRG*ARGAVH Trigger: GTGGACAGCCCCGCGGGCTCAGCCACGTACCGGGAG...TTTGTTCCTAAGGGCCAGATGGAGGTAATATGCTTGATAGATGGTATGAGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
||
| CDS-3UTR CCA 90 bp | AACAACTGCTCAGCACCACCAGGGATCTCACTAAGGCAGGCGGGCCTCTTTCCTCACCAGCAGGCCTGGTaGGTATTCATGATCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NNCSAPPGISLRQAGLFPHQQAW*VFMIVL Trigger: GAGAACGATCATGAATACCCACCAGGCCTGCTGGTG...AGGAAAGAGGCCCGCCTGCCTTAGTGAGATCCCTGGTGGTGCTGAGCAGTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR GCA 90 bp | CGACCACCACAAGTCACCAAGGGTGAAGTGGCTCATCTGAGGAGCCCTGTAAAACACAGGTACCATGATTaGCGTGGAGGCCATAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPPQVTKGEVAHLRSPVKHRYHD*RGGHSC Trigger: GCAGCTATGGCCTCCACGGCAATCATGGTACCTGTG...TTTTACAGGGCTCCTCAGATGAGCCACTTCACCCTTGGTGACTTGTGGTGGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR CCA 90 bp | GCAAGGAAGGAGGTCTGTCGATCCCTGGGGTTTCTGAGGCAATGCTTGCAACAGCTCACGGCTTCAATATaGGGCAGCAGACATGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARKEVCRSLGFLRQCLQQLTASI*GSRHVE Trigger: CTCCACATGTCTGCTGCCCCATATTGAAGCCGTGAG...CTGTTGCAAGCATTGCCTCAGAAACCCCAGGGATCGACAGACCTCCTTCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGAGGCAGGTACATCTCTGAGCTCAAGGCCAGCCTGGTCTACAGAGAGTTATCTGTGCAGTCGTTaGTGTGGTGACTGGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: EAEAGTSLSSRPAWSTESYLCSR*CGDWWT Trigger: TGTCCACCAGTCACCACACCAACGACTGCACAGATA...ACTCTCTGTAGACCAGGCTGGCCTTGAGCTCAGAGATGTACCTGCCTCTGCCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR CCA 90 bp | GTCTGTCGATCCCTGGGGTTTCTGAGGCAATGCTTGCAACAGTCTAAAGCCAGGGGGGTGGACAGGCTTTaGAAGGCTGTTGTGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VCRSLGFLRQCLQQSKARGVDRL*KAVVMW Trigger: CCACATCACAACAGCCTTCCAAAGCCTGTCCACCCC...CCTGGCTTTAGACTGTTGCAAGCATTGCCTCAGAAACCCCAGGGATCGACAGAC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGAGGCAGGTACATCTCTGAGCTCAAGGCCAGCCTGGTCTACAGAGAGTCTGCAGGCCACACTCTaGAATCTTCAGTTCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: EAEAGTSLSSRPAWSTESLQATL*NLQFHF Trigger: GAAGTGGAACTGAAGATTCCAGAGTGTGGCCTGCAG...ACTCTCTGTAGACCAGGCTGGCCTTGAGCTCAGAGATGTACCTGCCTCTGCCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAGGTGCATCAAAAACTCAGTGTCAGGTGGTGGTGGTGCATGCCTTTAATGCCCGCAGAGAGTGCTaGCTGGCCCCCATAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQGASKTQCQVVVVHAFNARREC*LAPIRS Trigger: GGACCTTATGGGGGCCAGTCAGCACTCTCTGCGGGC...ATTAAAGGCATGCACCACCACCACCTGACACTGAGTTTTTGATGCACCTTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
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| CDS-3UTR TCA 90 bp | GGTGAAGTGGCTCATCTGAGGAGCCCTGTAAAATCTCTCCCAGGATGCCAACTGCAATGGGCACAAACTTaGCCCAGCCCACCAGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: GEVAHLRSPVKSLPGCQLQWAQT*PSPPEQ Trigger: TTGTTCTGGTGGGCTGGGTCAAGTTTGTGCCCATTG...CAGTTGGCATCCTGGGAGAGATTTTACAGGGCTCCTCAGATGAGCCACTTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR TCA 90 bp | TTTAATCCCTGTACATGGGAGGCAGAGGCAGGTACATCTCTGAGCTCAAGGCCATGCCAGCCTGGTCCATaGGCACTATCACACACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FNPCTWEAEAGTSLSSRPCQPGP*ALSHTC Trigger: GCAAGTGTGTGATAGTGCTCATGGACCAGGCTGGCA...TGGCCTTGAGCTCAGAGATGTACCTGCCTCTGCCTCCCATGTACAGGGATTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR CCA 90 bp | GAGGACAGTTGTGCAGACATGTCACCTTCCTGGAGGAGCAAACAACTGCTCAGCCGTTGGTGTGGTGACTaGTGGACAGAGTTGAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: EDSCADMSPSWRSKQLLSRWCGD*WTELRL Trigger: CAATCTCAACTCTGTCCACCAGTCACCACACCAACG...GCTGAGCAGTTGTTTGCTCCTCCAGGAAGGTGACATGTCTGCACAACTGTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR TCA 90 bp | GGACAGTTGTGCAGACATGTCACCTTCCTGGAGGAGCAAACAACTGCTCAGCACACTGGTGGACAGAGTTaGGATTGTGGATGTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GQLCRHVTFLEEQTTAQHTGGQS*DCGCCS Trigger: TGAGCAACATCCACAATCTCAACTCTGTCCACCAGT...GTGCTGAGCAGTTGTTTGCTCCTCCAGGAAGGTGACATGTCTGCACAACTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR GCA 90 bp | TGCATTCTAAGGGCTGAATCTTCTCCCTTACCAACTCACCAACCCTTGTCAAGTAGCTCCTCCAGCTCCTaGTTGTGGCGGTCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CILRAESSPLPTHQPLSSSSSSS*LWRSVL Trigger: CAAGACAGACCGCCACAAGCAGGAGCTGGAGGAGCT...ACTTGACAAGGGTTGGTGAGTTGGTAAGGGAGAAGATTCAGCCCTTAGAATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR CCA 90 bp | CTTGAGGACAGTTGTGCAGACATGTCACCTTCCTGGAGGAGCAAACAACTGCTCTGGTGTGGTGACTGGTaGACAGAGTTGAGATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEDSCADMSPSWRSKQLLWCGDW*TELRLW Trigger: CCACAATCTCAACTCTGTCCACCAGTCACCACACCA...GAGCAGTTGTTTGCTCCTCCAGGAAGGTGACATGTCTGCACAACTGTCCTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
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| 3UTR CAA 72 bp | AGGGCTGAATCTTCTCCCTTACCAACTCACCAACCCTaGTCAAGTAGCTGCACAATCTCCCACTCGTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: RAESSPLPTHQP*SSSCTISHSSI Trigger: TATTGACGAGTGGGAGATTGTGCAGCTACTTGACAAGGGTTGGTGAGTTGGTAAGGGAGAAGATTCAGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
||
| CDS-3UTR TCA 90 bp | CTCATACCATCTATCAAGCATATTACCTCCATCTGGCCCTTAGGAACAAAGAACCCTGGTGGGTATTCATaGTCGTTCTCCAGCTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LIPSIKHITSIWPLGTKNPGGYS*SFSSCT Trigger: GGTACAGCTGGAGAACGATCATGAATACCCACCAGG...GTTCTTTGTTCCTAAGGGCCAGATGGAGGTAATATGCTTGATAGATGGTATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR CCA 90 bp | TGGACTCATACCATCTATCAAGCATATTACCTCCATCTGGCCCTTAGGAACAAATGCCACCAGCAGGCCTaGTGGGTATTCATGATCGTT | + |
|
Preference number: 4 (lower is better) Translates to: WTHTIYQAYYLHLALRNKCHQQA*WVFMIV Trigger: AACGATCATGAATACCCACCAGGCCTGCTGGTGGCA...TTTGTTCCTAAGGGCCAGATGGAGGTAATATGCTTGATAGATGGTATGAGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| 3UTR CAA 72 bp | AAAGCAGATTATACAGATAAGCAAGGGCTGATTGCCTaGAGGACAGTTGTGCAGACATGTCACCTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KADYTDKQGLIA*RTVVQTCHLPG Trigger: TCCAGGAAGGTGACATGTCTGCACAACTGTCCTCAAGGCAATCAGCCCTTGCTTATCTGTATAATCTGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061587.13 ENSMUST00000121504.2 |
||
| CDS-3UTR CCA 90 bp | CATAGCCATAGGAACATATGTGAGACACACTTTATTTACAAAACAAGGTGCATCGCTGTACCTCCACCATaGCCACCTTCTATGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSHRNICETHFIYKTRCIAVPPP*PPSMMS Trigger: TGACATCATAGAAGGTGGCCATGGTGGAGGTACAGC...GATGCACCTTGTTTTGTAAATAAAGTGTGTCTCACATATGTTCCTATGGCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
||
| CDS TCA 90 bp | CATAAGGTCCAGGTAGCCGCGGTGCACGAACTCCCGGTACGTGGCTaGGCCCGCGGGGCTGTCCACCTCCGGGTTCAGCGGGGCCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HKVQVAAVHELPVRG*ARGAVHLRVQRGLF Trigger: GAACAGGCCCCGCTGAACCCGGAGGTGGACAGCCCCGCGGGCTCAGCCACGTACCGGGAGTTCGTGCACCGCGGCTACCTGGACCTTATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061587.13 ENSMUST00000118865.8 ENSMUST00000121504.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGCCCTGTAAAATCTCTCCCAGGATGCCAACTGCAAAGCAGATTATACAGATCCTCCAGCTCCTGCTaGTGGCGGTCTGTCTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSPVKSLPGCQLQSRLYRSSSSC*WRSVLW Trigger: CCACAAGACAGACCGCCACAAGCAGGAGCTGGAGGA...TCTGTATAATCTGCTTTGCAGTTGGCATCCTGGGAGAGATTTTACAGGGCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR CAA 90 bp | ATTCTAAGGGCTGAATCTTCTCCCTTACCAACTCACCAACCCTTGTCAAGTAGCCGGGGTGGACAGGCTTaGGAAGGCTGTTGTGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: ILRAESSPLPTHQPLSSSRGGQA*EGCCDV Trigger: CACATCACAACAGCCTTCCAAAGCCTGTCCACCCCG...GCTACTTGACAAGGGTTGGTGAGTTGGTAAGGGAGAAGATTCAGCCCTTAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR CAA 90 bp | GAATCTTCTCCCTTACCAACTCACCAACCCTTGTCAAGTAGCTGCACAATCTCCGACTGGTGGACAGAGTaGAGATTGTGGATGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ESSPLPTHQPLSSSCTISDWWTE*RLWMLL Trigger: GAGCAACATCCACAATCTCAACTCTGTCCACCAGTC...GGAGATTGTGCAGCTACTTGACAAGGGTTGGTGAGTTGGTAAGGGAGAAGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR CAA 90 bp | AAACAAGGTGCATCAAAAACTCAGTGTCAGGTGGTGGTGGTGCATGCCTTTAATCCAATGGGCACAAACTaGACCCAGCCCACCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: KQGASKTQCQVVVVHAFNPMGTN*TQPTRT Trigger: TGTTCTGGTGGGCTGGGTCAAGTTTGTGCCCATTGG...ATTAAAGGCATGCACCACCACCACCTGACACTGAGTTTTTGATGCACCTTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS-3UTR CAA 90 bp | ATCTATCAAGCATATTACCTCCATCTGGCCCTTAGGAACAAAGAACCATACCCATTGTGGCGGTCTGTCTaGTGGGCAACCAAGGATCGG | + |
|
Preference number: 5 (lower is better) Translates to: IYQAYYLHLALRNKEPYPLWRSV*WATKDR Trigger: CCGATCCTTGGTTGCCCACAAGACAGACCGCCACAA...TGGGTATGGTTCTTTGTTCCTAAGGGCCAGATGGAGGTAATATGCTTGATAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061587.13 |
||
| CDS TCA 72 bp | CAGGTAGCCGCGGTGCACGAACTCCCGGTACGTGGCTaGGCCCGCGGGGCTGTCCACCTCCGGGTTCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: QVAAVHELPVRG*ARGAVHLRVQR Trigger: CCGCTGAACCCGGAGGTGGACAGCCCCGCGGGCTCAGCCACGTACCGGGAGTTCGTGCACCGCGGCTACCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061587.13 ENSMUST00000118865.8 ENSMUST00000121504.2 |
||
| CDS CCA 72 bp | GGTCCAGGTAGCCGCGGTGCACGAACTCCCGGTACGTaGCTGAGCCCGCGGGGCTGTCCACCTCCGGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GPGSRGARTPGT*LSPRGCPPPGS Trigger: TGAACCCGGAGGTGGACAGCCCCGCGGGCTCAGCCACGTACCGGGAGTTCGTGCACCGCGGCTACCTGGACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061587.13 ENSMUST00000118865.8 ENSMUST00000121504.2 |
||
| CDS CCA 72 bp | CTGGAATCTTCAGTTCCACTTCCCGGGGCCACTGCATaGCGAAGCCCGACAGCAGAGCAGATGTGCGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LESSVPLPGATA*RSPTAEQMCGW Trigger: CCAGCCGCACATCTGCTCTGCTGTCGGGCTTCGCCATGCAGTGGCCCCGGGAAGTGGAACTGAAGATTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121504.2 |
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