Pregenerated sensors for ORAI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049686Ensembl transcript IDs: ENSMUST00000051016.5, ENSMUST00000121652.8
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTCTCAATTTTTAAAAAGACTGGTGTTTAGTGACTCACCTGACTaGGCCATCCGATCAGGCAGTCTAGACCCAACAAACACAGACATG | + |
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Preference number: 1 (lower is better) Translates to: SSQFLKRLVFSDSPD*AIRSGSLDPTNTDM Trigger: CATGTCTGTGTTTGTTGGGTCTAGACTGCCTGATCGGATGGCCCAGTCAGGTGAGTCACTAAACACCAGTCTTTTTAAAAATTGAGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121652.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGGCAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGTTCCACACTCTGCCCTaGCAAAGCCAGCTGCCTACA | + |
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Preference number: 2 (lower is better) Translates to: LRAGQEASGWHWCRGEEGFHTLP*QSQLPT Trigger: TGTAGGCAGCTGGCTTTGCCAGGGCAGAGTGTGGAA...CCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGCCCTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCATCCGATCAGGCAGTCTAGACCCAACAAACACAGACATGAGGAAGAGGTGCCTGGCAAAGCCAGCTaGCTACACAGGCCGTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: GHPIRQSRPNKHRHEEEVPGKAS*LHRPSS Trigger: GGAGGACGGCCTGTGTAGGCAGCTGGCTTTGCCAGG...CACCTCTTCCTCATGTCTGTGTTTGTTGGGTCTAGACTGCCTGATCGGATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121652.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCACTGGTGCAGGGGAGAAGAAGGGACAAAGAGAGCAACTGTCCCCATTCCCCTTCCTTCCACACTCTaGCCTGGCAAAGCCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: WHWCRGEEGTKRATVPIPLPSTL*PGKASC Trigger: GCAGCTGGCTTTGCCAGGGCAGAGTGTGGAAGGAAG...GGGAATGGGGACAGTTGCTCTCTTTGTCCCTTCTTCTCCCCTGCACCAGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGGAAGAACAGGGAAAGCTTATTCTCACAGAAGAAAATCTCCAAGTACAGCCTGGCAAAGCCAGCTaGCTACACAGGCCGTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: QLEEQGKLILTEENLQVQPGKAS*LHRPSS Trigger: GGAGGACGGCCTGTGTAGGCAGCTGGCTTTGCCAGG...CTGTACTTGGAGATTTTCTTCTGTGAGAATAAGCTTTCCCTGTTCTTCCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| 3UTR-3UTR GCA 90 bp | TCTAGACCCAACAAACACAGACATGAGGAAGAGGTGTCCCTTGTGAATATATTTCTTCCTTCCACACTCTaGCCTGGCAAAGCCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: SRPNKHRHEEEVSLVNIFLPSTL*PGKASC Trigger: GCAGCTGGCTTTGCCAGGGCAGAGTGTGGAAGGAAG...AAATATATTCACAAGGGACACCTCTTCCTCATGTCTGTGTTTGTTGGGTCTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121652.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGAAGAACAGGGAAAGCTTATTCTCACAGAAGAAAATCTCCAAGTACAGTGTTCCACACTCTGCCCTaGCAAAGCCAGCTGCCTACA | + |
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Preference number: 2 (lower is better) Translates to: AGRTGKAYSHRRKSPSTVFHTLP*QSQLPT Trigger: TGTAGGCAGCTGGCTTTGCCAGGGCAGAGTGTGGAA...CACTGTACTTGGAGATTTTCTTCTGTGAGAATAAGCTTTCCCTGTTCTTCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| 3UTR CCA 72 bp | GTAAGGAGTTTGAGGGCAGGACAGGAAGCATCCGGGTaGCACTGGTGCAGGGGAGAAGAAGGGACAAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: VRSLRAGQEASG*HWCRGEEGTKR Trigger: TCTCTTTGTCCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGCCCTCAAACTCCTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| 3UTR CCA 72 bp | TTCTCTCTCACACACACACACACGCACACACACACTTaGCTAAGGAGTAAGGAGTTTGAGGGCAGGACAGGA | + |
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Preference number: 3 (lower is better) Translates to: FSLTHTHTHTHT*LRSKEFEGRTG Trigger: TCCTGTCCTGCCCTCAAACTCCTTACTCCTTAGCCAAGTGTGTGTGTGCGTGTGTGTGTGTGTGAGAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121652.8 |
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| CDS-3UTR TCA 90 bp | CAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGACAAAGATCCAGTCCGGGTAGCTaGCGGCGGGTGGCGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: QDRKHPGGTGAGEKKGQRSSPGS*RRVAAA Trigger: CGCCGCCGCCACCCGCCGTCAGCTACCCGGACTGGA...TCTTTGTCCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR TCA 90 bp | GCCCTGGCAAAGCCAGCTGCCTACACAGGCCGTCCTCCGGACTGGGCCAGGACAAAAGCAGCGTCCCGATaGCCGTGGAGAAGGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ALAKPAAYTGRPPDWARTKAASR*PWRRPR Trigger: CCTGGGCCTTCTCCACGGTCATCGGGACGCTGCTTT...TGTCCTGGCCCAGTCCGGAGGACGGCCTGTGTAGGCAGCTGGCTTTGCCAGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR TCA 90 bp | GCCCTGGCAAAGCCAGCTGCCTACACAGGCCGTCCTCCGGACTGGGCCAGGACAGGCCACAGGGAACCATaGTGGCGGTGGAGGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: ALAKPAAYTGRPPDWARTGHREP*WRWRQW Trigger: CCATTGCCTCCACCGCCATCATGGTTCCCTGTGGCC...TGTCCTGGCCCAGTCCGGAGGACGGCCTGTGTAGGCAGCTGGCTTTGCCAGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR GCA 90 bp | GCCCTGGCAAAGCCAGCTGCCTACACAGGCCGTCCTCCGGACTGGGCCAGGACACGCCAGGACAGCGCCTaGATCGAGTGCTCGTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ALAKPAAYTGRPPDWARTRQDSA*IECSLR Trigger: CCTCAACGAGCACTCGATGCAGGCGCTGTCCTGGCG...TGTCCTGGCCCAGTCCGGAGGACGGCCTGTGTAGGCAGCTGGCTTTGCCAGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | GCCCTGGCAAAGCCAGCTGCCTACACAGGCCGTCCTCCGGACTGGGCCAGGACACCTCTGTGGTCCAGCTaGTCCTGCAAGCGGGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: ALAKPAAYTGRPPDWARTPLWSS*SCKRAN Trigger: GTTTGCCCGCTTGCAGGACCAGCTGGACCACAGAGG...TGTCCTGGCCCAGTCCGGAGGACGGCCTGTGTAGGCAGCTGGCTTTGCCAGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR TCA 90 bp | CACACTTGGCTAAGGAGTAAGGAGTTTGAGGGCAGGACAGGAAGCATCCGGGTGTCCAGTCCGGGTAGCTaGCGGCGGGTGGCGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: HTWLRSKEFEGRTGSIRVSSPGS*RRVAAA Trigger: CGCCGCCGCCACCCGCCGTCAGCTACCCGGACTGGA...CACCCGGATGCTTCCTGTCCTGCCCTCAAACTCCTTACTCCTTAGCCAAGTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR TCA 90 bp | GGCAAAGCCAGCTGCCTACACAGGCCGTCCTCCGGACTGGGCCAGGACAAGGTCACTCGGCCAGCTCATTaGGCTCCTGGAACTGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: GKASCLHRPSSGLGQDKVTRPAH*APGTAG Trigger: ACCGGCAGTTCCAGGAGCTCAATGAGCTGGCCGAGT...GACCTTGTCCTGGCCCAGTCCGGAGGACGGCCTGTGTAGGCAGCTGGCTTTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR GCA 90 bp | GGCAAAGCCAGCTGCCTACACAGGCCGTCCTCCGGACTGGGCCAGGACAAGGTCCGATGTGGCGATGCATaGGCTCGTGGGGTGACTCTT | + |
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Preference number: 4 (lower is better) Translates to: GKASCLHRPSSGLGQDKVRCGDA*ARGVTL Trigger: AAGAGTCACCCCACGAGCGCATGCATCGCCACATCG...GACCTTGTCCTGGCCCAGTCCGGAGGACGGCCTGTGTAGGCAGCTGGCTTTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | AGGAGTTTGAGGGCAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAACAGCGGGAGGCTTGGTaGGGCTTGGCTGTCCCGCTT | + |
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Preference number: 4 (lower is better) Translates to: RSLRAGQEASGWHWCRGEQREAW*GLAVPL Trigger: AAGCGGGACAGCCAAGCCCCACCAAGCCTCCCGCTG...TTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGCCCTCAAACTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR GCA 90 bp | TGGCAAAGCCAGCTGCCTACACAGGCCGTCCTCCGGACTGGGCCAGGACAAGGTAGCGCCTGCATCGAGTaGTCGTTGAGGCTCATCACC | + |
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Preference number: 4 (lower is better) Translates to: WQSQLPTQAVLRTGPGQGSACIE*SLRLIT Trigger: GGTGATGAGCCTCAACGAGCACTCGATGCAGGCGCT...ACCTTGTCCTGGCCCAGTCCGGAGGACGGCCTGTGTAGGCAGCTGGCTTTGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR GCA 90 bp | TTGAGGGCAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGAGCTCGATGTGGCGATaGATGCGCTCGTGGGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LRAGQEASGWHWCRGEEGSSMWR*MRSWGD Trigger: GTCACCCCACGAGCGCATGCATCGCCACATCGAGCT...CCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGCCCTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR GCA 90 bp | GCAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGACAAAGTGGTCCAGCTGGTCCTaGAAGCGGGCAAACTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: AGQEASGWHWCRGEEGTKWSSWS*KRANSA Trigger: GGCCGAGTTTGCCCGCTTGCAGGACCAGCTGGACCA...CTTTGTCCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | GCCCTGGCAAAGCCAGCTGCCTACACAGGCCGTCCTCCGGACTGGGCCAGGACAGATGAGCAACCCTGGTaGGTAGTCATGGTCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: ALAKPAAYTGRPPDWARTDEQPW*VVMVCV Trigger: GACACAGACCATGACTACCCACCAGGGTTGCTCATC...TGTCCTGGCCCAGTCCGGAGGACGGCCTGTGTAGGCAGCTGGCTTTGCCAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | TGGCAAAGCCAGCTGCCTACACAGGCCGTCCTCCGGACTGGGCCAGGACAAGGTCGATGCATGCGCTCGTaGGGTGACTCTTTGACCGAG | + |
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Preference number: 4 (lower is better) Translates to: WQSQLPTQAVLRTGPGQGRCMRS*GDSLTE Trigger: CTCGGTCAAAGAGTCACCCCACGAGCGCATGCATCG...ACCTTGTCCTGGCCCAGTCCGGAGGACGGCCTGTGTAGGCAGCTGGCTTTGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | GCAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGACAAAGATTCAGCGGGAGGCTTaGTGGGGCTTGGCTGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: AGQEASGWHWCRGEEGTKIQREA*WGLAVP Trigger: CGGGACAGCCAAGCCCCACCAAGCCTCCCGCTGAAT...CTTTGTCCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR TCA 90 bp | TTGAGGGCAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGGCATCGAGTGCTCGTTaGGGCTCATCACCTCGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LRAGQEASGWHWCRGEEGASSAR*GSSPRS Trigger: ACTCCGAGGTGATGAGCCTCAACGAGCACTCGATGC...CCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGCCCTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | TGGCACTGGTGCAGGGGAGAAGAAGGGACAAAGAGAGCAACTGTCCCCATTCCCCAGCGGGAGGCTTGGTaGGGCTTGGCTGTCCCGCTT | + |
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Preference number: 4 (lower is better) Translates to: WHWCRGEEGTKRATVPIPQREAW*GLAVPL Trigger: AAGCGGGACAGCCAAGCCCCACCAAGCCTCCCGCTG...GGGAATGGGGACAGTTGCTCTCTTTGTCCCTTCTTCTCCCCTGCACCAGTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | AGTTTGAGGGCAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAATTCAGCGGGAGGCTTaGTGGGGCTTGGCTGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: SLRAGQEASGWHWCRGEEIQREA*WGLAVP Trigger: CGGGACAGCCAAGCCCCACCAAGCCTCCCGCTGAAT...TTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGCCCTCAAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | TTGAGGGCAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGGAATGGTCCCCTCTGTaGTCCAGCTGGTCCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LRAGQEASGWHWCRGEEGEWSPL*SSWSCK Trigger: CTTGCAGGACCAGCTGGACCACAGAGGGGACCATTC...CCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGCCCTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR TCA 90 bp | GCAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGACAAAGCATGCGCTCGTGGGGTaGCTCTTTGACCGAGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: AGQEASGWHWCRGEEGTKHALVG*LFDRVE Trigger: CTCAACTCGGTCAAAGAGTCACCCCACGAGCGCATG...CTTTGTCCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR TCA 90 bp | CAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGACAAAGAACTCGGCCAGCTCATTaGGCTCCTGGAACTGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: QDRKHPGGTGAGEKKGQRTRPAH*APGTAG Trigger: ACCGGCAGTTCCAGGAGCTCAATGAGCTGGCCGAGT...TCTTTGTCCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR GCA 90 bp | GGCCATCCGATCAGGCAGTCTAGACCCAACAAACACAGACATGAGGAAGAGGTGCGGGAAGCTCCGGATTaGTGTGACTCGGGGGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: GHPIRQSRPNKHRHEEEVREAPD*CDSGAG Trigger: CCCCGCCCCCGAGTCACAGCAATCCGGAGCTTCCCG...CACCTCTTCCTCATGTCTGTGTTTGTTGGGTCTAGACTGCCTGATCGGATGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121652.8 |
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| CDS-3UTR GCA 90 bp | GTAAGGAGTTTGAGGGCAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGGCTTAAGTAGAGCTTaGGCCAGGACAGCGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VRSLRAGQEASGWHWCRGGLSRA*ARTAPA Trigger: TGCAGGCGCTGTCCTGGCGCAAGCTCTACTTAAGCC...TCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGCCCTCAAACTCCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR GCA 90 bp | GCAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGACAAAGGGCTTAAGTAGAGCTTaGGCCAGGACAGCGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: AGQEASGWHWCRGEEGTKGLSRA*ARTAPA Trigger: TGCAGGCGCTGTCCTGGCGCAAGCTCTACTTAAGCC...CTTTGTCCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR GCA 90 bp | ACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGACAAAGAGAGCAGCTCGATGTGGCGATaGATGCGCTCGTGGGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: TGSIRVALVQGRRRDKESSSMWR*MRSWGD Trigger: GTCACCCCACGAGCGCATGCATCGCCACATCGAGCT...GCTCTCTTTGTCCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | GTAAGGAGTTTGAGGGCAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGACCCGGTGTTAGAGAATaGTCCCCTCTGTGGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VRSLRAGQEASGWHWCRGPGVRE*SPLWSS Trigger: GCTGGACCACAGAGGGGACCATTCTCTAACACCGGG...TCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGCCCTCAAACTCCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR TCA 90 bp | CAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGACAAAGACATGCGCTCGTGGGGTaGCTCTTTGACCGAGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: QDRKHPGGTGAGEKKGQRHALVG*LFDRVE Trigger: CTCAACTCGGTCAAAGAGTCACCCCACGAGCGCATG...TCTTTGTCCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR TCA 90 bp | CACACTTGGCTAAGGAGTAAGGAGTTTGAGGGCAGGACAGGAAGCATCCGGGTGGGCCACAGGGAACCATaGTGGCGGTGGAGGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: HTWLRSKEFEGRTGSIRVGHREP*WRWRQW Trigger: CCATTGCCTCCACCGCCATCATGGTTCCCTGTGGCC...CACCCGGATGCTTCCTGTCCTGCCCTCAAACTCCTTACTCCTTAGCCAAGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR GCA 90 bp | TGGCACTGGTGCAGGGGAGAAGAAGGGACAAAGAGAGCAACTGTCCCCATTCCCAGCGCCTGCATCGAGTaGTCGTTGAGGCTCATCACC | + |
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Preference number: 4 (lower is better) Translates to: WHWCRGEEGTKRATVPIPSACIE*SLRLIT Trigger: GGTGATGAGCCTCAACGAGCACTCGATGCAGGCGCT...GGGAATGGGGACAGTTGCTCTCTTTGTCCCTTCTTCTCCCCTGCACCAGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR GCA 90 bp | GGCCATCCGATCAGGCAGTCTAGACCCAACAAACACAGACATGAGGAAGAGGTGTGGTCCAGCTGGTCCTaGAAGCGGGCAAACTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: GHPIRQSRPNKHRHEEEVWSSWS*KRANSA Trigger: GGCCGAGTTTGCCCGCTTGCAGGACCAGCTGGACCA...CACCTCTTCCTCATGTCTGTGTTTGTTGGGTCTAGACTGCCTGATCGGATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | GGCCATCCGATCAGGCAGTCTAGACCCAACAAACACAGACATGAGGAAGAGGTGCCACCATCGCTACCATaGCGAAGCCGGAGAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: GHPIRQSRPNKHRHEEEVPPSLP*RSRRAE Trigger: CTCTGCTCTCCGGCTTCGCCATGGTAGCGATGGTGG...CACCTCTTCCTCATGTCTGTGTTTGTTGGGTCTAGACTGCCTGATCGGATGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | AGTTTGAGGGCAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGATGAGCAACCCTGGTaGGTAGTCATGGTCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: SLRAGQEASGWHWCRGEEDEQPW*VVMVCV Trigger: GACACAGACCATGACTACCCACCAGGGTTGCTCATC...TTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGCCCTCAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR GCA 90 bp | CACACTTGGCTAAGGAGTAAGGAGTTTGAGGGCAGGACAGGAAGCATCCGGGTGTTGAGCTCCTGGAACTaGCGGTCCGTCTTATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HTWLRSKEFEGRTGSIRVLSSWN*RSVLWL Trigger: CAGCCATAAGACGGACCGGCAGTTCCAGGAGCTCAA...CACCCGGATGCTTCCTGTCCTGCCCTCAAACTCCTTACTCCTTAGCCAAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | AGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGACAAAGAGAGCAAAGCTCATTGAGCTCCTaGAACTGCCGGTCCGTCTTA | + |
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Preference number: 4 (lower is better) Translates to: RKHPGGTGAGEKKGQREQSSLSS*NCRSVL Trigger: TAAGACGGACCGGCAGTTCCAGGAGCTCAATGAGCT...TTGCTCTCTTTGTCCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR TCA 90 bp | CAGCTGGAAGAACAGGGAAAGCTTATTCTCACAGAAGAAAATCTCCAAGTACAGAGCTCCGGATTGCTGTaGCTCGGGGGCGGGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: QLEEQGKLILTEENLQVQSSGLL*LGGGAG Trigger: GCCTGCCCCGCCCCCGAGTCACAGCAATCCGGAGCT...CTGTACTTGGAGATTTTCTTCTGTGAGAATAAGCTTTCCCTGTTCTTCCAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR TCA 90 bp | GCTGGAAGAACAGGGAAAGCTTATTCTCACAGAAGAAAATCTCCAAGTACAGTGAGCTCCGGATTGCTGTaGCTCGGGGGCGGGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: AGRTGKAYSHRRKSPSTVSSGLL*LGGGAG Trigger: GCCTGCCCCGCCCCCGAGTCACAGCAATCCGGAGCT...CACTGTACTTGGAGATTTTCTTCTGTGAGAATAAGCTTTCCCTGTTCTTCCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR GCA 90 bp | CAGCTGGAAGAACAGGGAAAGCTTATTCTCACAGAAGAAAATCTCCAAGTACAGCGGGAAGCTCCGGATTaGTGTGACTCGGGGGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: QLEEQGKLILTEENLQVQREAPD*CDSGAG Trigger: CCCCGCCCCCGAGTCACAGCAATCCGGAGCTTCCCG...CTGTACTTGGAGATTTTCTTCTGTGAGAATAAGCTTTCCCTGTTCTTCCAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | GGCCATCCGATCAGGCAGTCTAGACCCAACAAACACAGACATGAGGAAGAGGTGAGCTCATTGAGCTCCTaGAACTGCCGGTCCGTCTTA | + |
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Preference number: 4 (lower is better) Translates to: GHPIRQSRPNKHRHEEEVSSLSS*NCRSVL Trigger: TAAGACGGACCGGCAGTTCCAGGAGCTCAATGAGCT...CACCTCTTCCTCATGTCTGTGTTTGTTGGGTCTAGACTGCCTGATCGGATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121652.8 |
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| CDS-3UTR TCA 90 bp | CAGCTGGAAGAACAGGGAAAGCTTATTCTCACAGAAGAAAATCTCCAAGTACAGAAAGCAGCGTCCCGATaGCCGTGGAGAAGGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QLEEQGKLILTEENLQVQKAASR*PWRRPR Trigger: CCTGGGCCTTCTCCACGGTCATCGGGACGCTGCTTT...CTGTACTTGGAGATTTTCTTCTGTGAGAATAAGCTTTCCCTGTTCTTCCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | CAGCTGGAAGAACAGGGAAAGCTTATTCTCACAGAAGAAAATCTCCAAGTACAGCCACCATCGCTACCATaGCGAAGCCGGAGAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QLEEQGKLILTEENLQVQPPSLP*RSRRAE Trigger: CTCTGCTCTCCGGCTTCGCCATGGTAGCGATGGTGG...CTGTACTTGGAGATTTTCTTCTGTGAGAATAAGCTTTCCCTGTTCTTCCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | GCTGGAAGAACAGGGAAAGCTTATTCTCACAGAAGAAAATCTCCAAGTACAGTGGAATGGTCCCCTCTGTaGTCCAGCTGGTCCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: AGRTGKAYSHRRKSPSTVEWSPL*SSWSCK Trigger: CTTGCAGGACCAGCTGGACCACAGAGGGGACCATTC...CACTGTACTTGGAGATTTTCTTCTGTGAGAATAAGCTTTCCCTGTTCTTCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR GCA 90 bp | TCTAGACCCAACAAACACAGACATGAGGAAGAGGTGTCCCTTGTGAATATATTTCGATGTGGCGATGCATaGGCTCGTGGGGTGACTCTT | + |
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Preference number: 4 (lower is better) Translates to: SRPNKHRHEEEVSLVNIFRCGDA*ARGVTL Trigger: AAGAGTCACCCCACGAGCGCATGCATCGCCACATCG...AAATATATTCACAAGGGACACCTCTTCCTCATGTCTGTGTTTGTTGGGTCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121652.8 |
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| CDS-3UTR GCA 90 bp | CAGCTGGAAGAACAGGGAAAGCTTATTCTCACAGAAGAAAATCTCCAAGTACAGTTGAGCTCCTGGAACTaGCGGTCCGTCTTATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QLEEQGKLILTEENLQVQLSSWN*RSVLWL Trigger: CAGCCATAAGACGGACCGGCAGTTCCAGGAGCTCAA...CTGTACTTGGAGATTTTCTTCTGTGAGAATAAGCTTTCCCTGTTCTTCCAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CCA 90 bp | TCTAGACCCAACAAACACAGACATGAGGAAGAGGTGTCCCTTGTGAATATATTTCCCGGTGTTAGAGAATaGTCCCCTCTGTGGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SRPNKHRHEEEVSLVNIFPGVRE*SPLWSS Trigger: GCTGGACCACAGAGGGGACCATTCTCTAACACCGGG...AAATATATTCACAAGGGACACCTCTTCCTCATGTCTGTGTTTGTTGGGTCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121652.8 |
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| CDS CCA 90 bp | GCAATGGCTGCCGCCTCACCCGGGGTGATGCCGCTGCTGTCGCTGTaGTTGGCGACGATGACTGATTCAGCGGGAGGCTTGGTGGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: AMAAASPGVMPLLSL*LATMTDSAGGLVGL Trigger: AAGCCCCACCAAGCCTCCCGCTGAATCAGTCATCGTCGCCAACCACAGCGACAGCAGCGGCATCACCCCGGGTGAGGCGGCAGCCATTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CAA 90 bp | GCCCTGGCAAAGCCAGCTGCCTACACAGGCCGTCCTCCGGACTGGGCCAGGACATTGAGAGGTAAGAACTaGACCCAGCAGAGCAGCACG | + |
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Preference number: 5 (lower is better) Translates to: ALAKPAAYTGRPPDWARTLRGKN*TQQSST Trigger: CGTGCTGCTCTGCTGGGTCAAGTTCTTACCTCTCAA...TGTCCTGGCCCAGTCCGGAGGACGGCCTGTGTAGGCAGCTGGCTTTGCCAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CAA 90 bp | TTGAGGGCAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGAACTCGGCCAGCTCATaGAGCTCCTGGAACTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: LRAGQEASGWHWCRGEEGNSASS*SSWNCR Trigger: CCGGCAGTTCCAGGAGCTCAATGAGCTGGCCGAGTT...CCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGCCCTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS GCA 90 bp | GTGCCCGGTGTTAGAGAATGGTCCCCTCTGTGGTCCAGCTGGTCCTaGAAGCGGGCAAACTCGGCCAGCTCATTGAGCTCCTGGAACTGC | + |
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Preference number: 5 (lower is better) Translates to: VPGVREWSPLWSSWS*KRANSASSLSSWNC Trigger: GCAGTTCCAGGAGCTCAATGAGCTGGCCGAGTTTGCCCGCTTGCAGGACCAGCTGGACCACAGAGGGGACCATTCTCTAACACCGGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CAA 90 bp | GTAAGGAGTTTGAGGGCAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGATGCATCGAGTGCTCGTaGAGGCTCATCACCTCGGAG | + |
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Preference number: 5 (lower is better) Translates to: VRSLRAGQEASGWHWCRGCIECS*RLITSE Trigger: CTCCGAGGTGATGAGCCTCAACGAGCACTCGATGCA...TCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTGCCCTCAAACTCCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS TCA 90 bp | TTAAGTAGAGCTTGCGCCAGGACAGCGCCTGCATCGAGTGCTCGTTaGGGCTCATCACCTCGGAGTAACTCTGGCCGATCCAGTCCGGGT | + |
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Preference number: 5 (lower is better) Translates to: LSRACARTAPASSAR*GSSPRSNSGRSSPG Trigger: ACCCGGACTGGATCGGCCAGAGTTACTCCGAGGTGATGAGCCTCAACGAGCACTCGATGCAGGCGCTGTCCTGGCGCAAGCTCTACTTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CAA 90 bp | GGCCATCCGATCAGGCAGTCTAGACCCAACAAACACAGACATGAGGAAGAGGTGGATTCAGCGGGAGGCTaGGTGGGGCTTGGCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: GHPIRQSRPNKHRHEEEVDSAGG*VGLGCP Trigger: GGGACAGCCAAGCCCCACCAAGCCTCCCGCTGAATC...CACCTCTTCCTCATGTCTGTGTTTGTTGGGTCTAGACTGCCTGATCGGATGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121652.8 |
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| CDS-3UTR CAA 90 bp | AGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGACAAAGAGAGCAATGCATCGAGTGCTCGTaGAGGCTCATCACCTCGGAG | + |
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Preference number: 5 (lower is better) Translates to: RKHPGGTGAGEKKGQREQCIECS*RLITSE Trigger: CTCCGAGGTGATGAGCCTCAACGAGCACTCGATGCA...TTGCTCTCTTTGTCCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CAA 90 bp | CAGGACAGGAAGCATCCGGGTGGCACTGGTGCAGGGGAGAAGAAGGGACAAAGATTGAGAGGTAAGAACTaGACCCAGCAGAGCAGCACG | + |
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Preference number: 5 (lower is better) Translates to: QDRKHPGGTGAGEKKGQRLRGKN*TQQSST Trigger: CGTGCTGCTCTGCTGGGTCAAGTTCTTACCTCTCAA...TCTTTGTCCCTTCTTCTCCCCTGCACCAGTGCCACCCGGATGCTTCCTGTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CAA 90 bp | GCTGGAAGAACAGGGAAAGCTTATTCTCACAGAAGAAAATCTCCAAGTACAGTGGAGGCTTGGTGGGGCTaGGCTGTCCCGCTTGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: AGRTGKAYSHRRKSPSTVEAWWG*AVPLAS Trigger: AGAGGCAAGCGGGACAGCCAAGCCCCACCAAGCCTC...CACTGTACTTGGAGATTTTCTTCTGTGAGAATAAGCTTTCCCTGTTCTTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CAA 90 bp | CAGCTGGAAGAACAGGGAAAGCTTATTCTCACAGAAGAAAATCTCCAAGTACAGGATTCAGCGGGAGGCTaGGTGGGGCTTGGCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: QLEEQGKLILTEENLQVQDSAGG*VGLGCP Trigger: GGGACAGCCAAGCCCCACCAAGCCTCCCGCTGAATC...CTGTACTTGGAGATTTTCTTCTGTGAGAATAAGCTTTCCCTGTTCTTCCAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS-3UTR CAA 90 bp | GCTGGAAGAACAGGGAAAGCTTATTCTCACAGAAGAAAATCTCCAAGTACAGTGAACTCGGCCAGCTCATaGAGCTCCTGGAACTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: AGRTGKAYSHRRKSPSTVNSASS*SSWNCR Trigger: CCGGCAGTTCCAGGAGCTCAATGAGCTGGCCGAGTT...CACTGTACTTGGAGATTTTCTTCTGTGAGAATAAGCTTTCCCTGTTCTTCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS CAA 90 bp | ATGGCTGCCGCCTCACCCGGGGTGATGCCGCTGCTGTCGCTGTGGTaGGCGACGATGACTGATTCAGCGGGAGGCTTGGTGGGGCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: MAAASPGVMPLLSLW*ATMTDSAGGLVGLG Trigger: GCCAAGCCCCACCAAGCCTCCCGCTGAATCAGTCATCGTCGCCAACCACAGCGACAGCAGCGGCATCACCCCGGGTGAGGCGGCAGCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS TCA 72 bp | GATGCCGCTGCTGTCGCTGTGGTTGGCGACGATGACTaGTTCAGCGGGAGGCTTGGTGGGGCTTGGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: DAAAVAVVGDDD*FSGRLGGAWLS Trigger: GGACAGCCAAGCCCCACCAAGCCTCCCGCTGAATCAGTCATCGTCGCCAACCACAGCGACAGCAGCGGCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS CAA 90 bp | CTGTGGTCCAGCTGGTCCTGCAAGCGGGCAAACTCGGCCAGCTCATaGAGCTCCTGGAACTGCCGGTCCGTCTTATGGCTGACCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LWSSWSCKRANSASS*SSWNCRSVLWLTRE Trigger: CTCCCTGGTCAGCCATAAGACGGACCGGCAGTTCCAGGAGCTCAATGAGCTGGCCGAGTTTGCCCGCTTGCAGGACCAGCTGGACCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS CCA 72 bp | TGCAAGCGGGCAAACTCGGCCAGCTCATTGAGCTCCTaGAACTGCCGGTCCGTCTTATGGCTGACCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: CKRANSASSLSS*NCRSVLWLTRE Trigger: CTCCCTGGTCAGCCATAAGACGGACCGGCAGTTCCAGGAGCTCAATGAGCTGGCCGAGTTTGCCCGCTTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS CCA 72 bp | CCCGGTGTTAGAGAATGGTCCCCTCTGTGGTCCAGCTaGTCCTGCAAGCGGGCAAACTCGGCCAGCTCATTG | + |
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Preference number: 6 (lower is better) Translates to: PGVREWSPLWSS*SCKRANSASSL Trigger: CAATGAGCTGGCCGAGTTTGCCCGCTTGCAGGACCAGCTGGACCACAGAGGGGACCATTCTCTAACACCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS CAA 72 bp | GGAGGCTTGGTGGGGCTTGGCTGTCCCGCTTGCCTCTaGAGAGGTAAGAACTTGACCCAGCAGAGCAGCACG | + |
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Preference number: 6 (lower is better) Translates to: GGLVGLGCPACL*RGKNLTQQSST Trigger: CGTGCTGCTCTGCTGGGTCAAGTTCTTACCTCTCAAGAGGCAAGCGGGACAGCCAAGCCCCACCAAGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS CAA 72 bp | AGCTGGTCCTGCAAGCGGGCAAACTCGGCCAGCTCATaGAGCTCCTGGAACTGCCGGTCCGTCTTATGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SWSCKRANSASS*SSWNCRSVLWL Trigger: CAGCCATAAGACGGACCGGCAGTTCCAGGAGCTCAATGAGCTGGCCGAGTTTGCCCGCTTGCAGGACCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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| CDS GCA 72 bp | GTTAGAGAATGGTCCCCTCTGTGGTCCAGCTGGTCCTaGAAGCGGGCAAACTCGGCCAGCTCATTGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: VREWSPLWSSWS*KRANSASSLSS Trigger: GGAGCTCAATGAGCTGGCCGAGTTTGCCCGCTTGCAGGACCAGCTGGACCACAGAGGGGACCATTCTCTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051016.5 ENSMUST00000121652.8 |
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