Pregenerated sensors for OPTN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026672Ensembl transcript IDs: ENSMUST00000027986.5, ENSMUST00000114996.8
Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTGTCCAGACATCTGTAAGCTaGTACTTCATCTGCAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: RRCAIGQHSHSSHTFPPVQTSVS*YFICKE Trigger: TTCTTTGCAGATGAAGTAGCAGCTTACAGATGTCTG...GACAGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| 3UTR-3UTR CCA 90 bp | AGACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTGTCTCAGAAAGAGCCACATaGAACTTCCACAGAATTACA | + |
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Preference number: 2 (lower is better) Translates to: RRCAIGQHSHSSHTFPPVSERAT*NFHRIT Trigger: TGTAATTCTGTGGAAGTTCCATGTGGCTCTTTCTGA...GACAGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTTGTCCCTATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTCAACACTGCAGCCATTCTaGCTGACTGCTCACAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: ELVPISHLSWCQQIPQCSTLQPF*LTAHSD Trigger: GTCACTGTGAGCAGTCAGCCAGAATGGCTGCAGTGT...TGAACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATAGGGACAAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| 3UTR-3UTR TCA 90 bp | AAACTATGTACTGTACTATCCTGTACAGCTCCAGTACGGAGCCTGAGGGTAATGGAAGGACTCCAATCCTaGGCTTGTCCCTATCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: KLCTVLSCTAPVRSLRVMEGLQS*ACPYLS Trigger: TGAGAGATAGGGACAAGCTCAGGATTGGAGTCCTTC...CATTACCCTCAGGCTCCGTACTGGAGCTGTACAGGATAGTACAGTACATAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCTTGTCCCTATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTACACACACAACAAGATaGCCACTAAGGGAAGATTTA | + |
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Preference number: 2 (lower is better) Translates to: LSLSLSLTCPGVNRYHSVTHTTR*PLREDL Trigger: TAAATCTTCCCTTAGTGGGCATCTTGTTGTGTGTGT...AACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATAGGGACAAGCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTTGTCCCTATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTCATCAGAAAGAGCCACATaGAACTTCCACAGAATTACA | + |
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Preference number: 2 (lower is better) Translates to: ELVPISHLSWCQQIPQCSSERAT*NFHRIT Trigger: TGTAATTCTGTGGAAGTTCCATGTGGCTCTTTCTGA...TGAACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATAGGGACAAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| 3UTR-3UTR GCA 90 bp | TTACCTAGAAAAACACTGCAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATACACACACAACAAGATaGCCACTAAGGGAAGATTTA | + |
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Preference number: 2 (lower is better) Translates to: LPRKTLQPFWLTAHSDSHTHTTR*PLREDL Trigger: TAAATCTTCCCTTAGTGGGCATCTTGTTGTGTGTGT...ATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTGCAGTGTTTTTCTAGGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| 3UTR-3UTR CCA 90 bp | AATATACAAATGATTACAGTCACTATTCTGTACAGATTATCCCTCCTGAGACGCGTTGGAGGAGAAATCTaGCATTTACCAAGAGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: NIQMITVTILYRLSLLRRVGGEI*HLPRAL Trigger: CAAAGCTCTTGGTAAATGCCAGATTTCTCCTCCAAC...GCGTCTCAGGAGGGATAATCTGTACAGAATAGTGACTGTAATCATTTGTATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
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| 3UTR GCA 72 bp | AGCACTCTCACTCTTCCCACACCTTCCCTCCTGTCCTaGTACCCACTGTTAGGCTCTCAGTGTCTCAGACAT | + |
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Preference number: 3 (lower is better) Translates to: STLTLPTPSLLS*YPLLGSQCLRH Trigger: ATGTCTGAGACACTGAGAGCCTAACAGTGGGTAGCAGGACAGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| 3UTR GCA 72 bp | CACTATTCTGTACAGATTATCCCTCCTGAGACGCTGTaGCATCGGCCAGCACTCTCACTCTTCCCACACCTT | + |
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Preference number: 3 (lower is better) Translates to: HYSVQIIPPETL*HRPALSLFPHL Trigger: AAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTCTCAGGAGGGATAATCTGTACAGAATAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| 3UTR CCA 72 bp | TCCAATCCTGAGCTTGTCCCTATCTCTCACCTGTCCTaGTGTCAACAGATACCACAGTGTTCAGTCAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: SNPELVPISHLS*CQQIPQCSVRK Trigger: CTTTCTGACTGAACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATAGGGACAAGCTCAGGATTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| 3UTR-3UTR CAA 90 bp | TATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTCAGTCAGAAAGAGACAGAAGTACAAGTGTaGGAGGAGAAATCTGGCATT | + |
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Preference number: 3 (lower is better) Translates to: YLSPVLVSTDTTVFSQKETEVQV*EEKSGI Trigger: AATGCCAGATTTCTCCTCCAACACTTGTACTTCTGT...CTCTTTCTGACTGAACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
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| 3UTR CCA 72 bp | AAAGAAGACAGAAGTACAAGTGTTGGAGGAGAAATCTaGCATTTACCAAGAGCTTTGGGGACTGGAGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: KEDRSTSVGGEI*HLPRALGTGEN Trigger: GTTCTCTCCAGTCCCCAAAGCTCTTGGTAAATGCCAGATTTCTCCTCCAACACTTGTACTTCTGTCTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
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| 3UTR GCA 72 bp | ACATGGAACTTCCACAGAATTACACACACAACAAGATaGCCACTAAGGGAAGATTTACCTAGAAAAACACTG | + |
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Preference number: 3 (lower is better) Translates to: TWNFHRITHTTR*PLREDLPRKTL Trigger: CAGTGTTTTTCTAGGTAAATCTTCCCTTAGTGGGCATCTTGTTGTGTGTGTAATTCTGTGGAAGTTCCATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | GACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTGTCCTGCCAGAGCCTGCTCTaGCAGCTCCAGCTTCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: DAVPSASTLTLPTPSLLSCQSLL*QLQLLA Trigger: AGCGAGAAGCTGGAGCTGGCAGAGCAGGCTCTGGCA...GGACAGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR TCA 90 bp | CTGAGACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTCACTTGGGGCAGGAGTaGATCGGAATACTGCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LRRCAIGQHSHSSHTFPPHLGQE*IGILRG Trigger: GCCTCGCAGTATTCCGATTCACTCCTGCCCCAAGTG...AGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | CCTGAGACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCAGAGTCACTGGTTCTTaGCCCGTGTCGGCACTGCAT | + |
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Preference number: 4 (lower is better) Translates to: PETLCHRPALSLFPHLPSRVTGS*PVSALH Trigger: ATGCAGTGCCGACACGGGGCAAGAACCAGTGACTCT...GGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTCTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CCA 90 bp | AGACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTGTCCCTCCTCCAAGGCTCTaGGATACCTGTAGCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: RRCAIGQHSHSSHTFPPVPPPRL*DTCSHL Trigger: CAGGTGGCTACAGGTATCCCAGAGCCTTGGAGGAGG...GACAGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | GACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTGTCCGCAGTTCTGAGACGATaGCCAGCAGGTCTGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: DAVPSASTLTLPTPSLLSAVLRR*PAGLPF Trigger: AAAAGGCAGACCTGCTGGGCATCGTCTCAGAACTGC...GGACAGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CCA 90 bp | CCTGAGACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCGAGTTGCCTGCAGAGTaGCTAACCTGGACTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PETLCHRPALSLFPHLPSELPAE*LTWTSP Trigger: AGGAGAAGTCCAGGTTAGCCACTCTGCAGGCAACTC...GGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTCTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | ACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTGTCCTCTCCTTCTCTCTGTCTaGTCTCCTCGCTGTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: TLCHRPALSLFPHLPSCPLLLSV*SPRCLL Trigger: AAGCAGACAGCGAGGAGAGCAGACAGAGAGAAGGAG...AGGACAGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | AGACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTGTCCTCCTTCTCTCTGTCTaGTCTCCTCGCTGTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: RRCAIGQHSHSSHTFPPVLLLSV*SPRCLL Trigger: AAGCAGACAGCGAGGAGAGCAGACAGAGAGAAGGAG...GACAGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CCA 90 bp | CTGAGACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTTGGGGTGAACCATATTaGAGGGTCCATTTCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LRRCAIGQHSHSSHTFPPWGEPY*RVHFLG Trigger: CCCCAGGAAATGGACCCTCCAATATGGTTCACCCCA...AGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CCA 90 bp | CTGAGACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTGCAGAGTGGCTAACCTaGACTTCTCCTCCTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: LRRCAIGQHSHSSHTFPPAEWLT*TSPPLS Trigger: AGACAGAGGAGGAGAAGTCCAGGTTAGCCACTCTGC...AGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | AGACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTGTCGAGTTGAGTTTGAGCTaGAGTTCTGAGACGATGCCC | + |
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Preference number: 4 (lower is better) Translates to: RRCAIGQHSHSSHTFPPVELSLS*SSETMP Trigger: GGGCATCGTCTCAGAACTGCAGCTCAAACTCAACTC...GACAGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | GACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTGTCCCTTCATCTCCTTCATTaGCCCTTCAGTCTCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: DAVPSASTLTLPTPSLLSLHLLH*PFSLSF Trigger: GAAGGAGAGACTGAAGGGGCAATGAAGGAGATGAAG...GGACAGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | CTGCAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAGGCTGCTGCCCGTGCTaGCAGCTCCTGTCCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: LQPFWLTAHSDSHEQNIKGCCPC*QLLSSA Trigger: AGCCGAGGACAGGAGCTGGCAGCACGGGCAGCAGCC...TTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR TCA 90 bp | GAGCTTGTCCCTATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTCAGCAGCTCCTCAGGGGTaGATGTGTCCAGGCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: ELVPISHLSWCQQIPQCSAAPQG*MCPGWG Trigger: ACCCCAGCCTGGACACATTCACCCCTGAGGAGCTGC...TGAACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATAGGGACAAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | ACACCTTCCCTCCTGTCCTGCTACCCACTGTTAGGCTCTCAGTGTCTCAGACATAGGCGCTCTTCCTTCTaGTTCTCTGTCCAGGCGGAC | + |
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Preference number: 4 (lower is better) Translates to: TPSLLSCYPLLGSQCLRHRRSSF*FSVQAD Trigger: GTCCGCCTGGACAGAGAAGCAGAAGGAAGAGCGCCT...ATGTCTGAGACACTGAGAGCCTAACAGTGGGTAGCAGGACAGGAGGGAAGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | ACACCTTCCCTCCTGTCCTGCTACCCACTGTTAGGCTCTCAGTGTCTCAGACATTTGGATGCCAGAGCCTaGTCTGCCAGCTCCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: TPSLLSCYPLLGSQCLRHLDARA*SASSSF Trigger: GAAGCTGGAGCTGGCAGAGCAGGCTCTGGCATCCAA...ATGTCTGAGACACTGAGAGCCTAACAGTGGGTAGCAGGACAGGAGGGAAGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CCA 90 bp | AGACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTGTCATGGCTTCTTTCAGCTaGTGGTTCTCAACCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: RRCAIGQHSHSSHTFPPVMASFS*WFSTRS Trigger: ACTCCTGGTTGAGAACCACCAGCTGAAAGAAGCCAT...GACAGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR TCA 90 bp | ACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTGTCCTTTTGTGTGTGCCTCTTaGAGCTCCTTAAACAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: TLCHRPALSLFPHLPSCPFVCAS*SSLNRE Trigger: CTCTCTGTTTAAGGAGCTTCAAGAGGCACACACAAA...AGGACAGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | ATTAAACTATGTACTGTACTATCCTGTACAGCTCCAGTACGGAGCCTGAGGGTAGGCTGCTGCCCGTGCTaGCAGCTCCTGTCCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: IKLCTVLSCTAPVRSLRVGCCPC*QLLSSA Trigger: AGCCGAGGACAGGAGCTGGCAGCACGGGCAGCAGCC...TACCCTCAGGCTCCGTACTGGAGCTGTACAGGATAGTACAGTACATAGTTTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| 3UTR CAA 72 bp | CACCGAACAGCTGAGGGAAGGACTCCAATCCTGAGCTaGTCCCTATCTCTCACCTGTCCTGGTGTCAACAGA | + |
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Preference number: 4 (lower is better) Translates to: HRTAEGRTPILS*SLSLTCPGVNR Trigger: TCTGTTGACACCAGGACAGGTGAGAGATAGGGACAAGCTCAGGATTGGAGTCCTTCCCTCAGCTGTTCGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR TCA 90 bp | AAAACACTGCAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACGTGTCCAGGCTGGGGTaGACCATATTGGAGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: KTLQPFWLTAHSDSHEQNVSRLG*TILEGP Trigger: TGGACCCTCCAATATGGTTCACCCCAGCCTGGACAC...GTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTGCAGTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR TCA 90 bp | CTGAGCTTGTCCCTATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTCACTTGGGGCAGGAGTaGATCGGAATACTGCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LSLSLSLTCPGVNRYHSVHLGQE*IGILRG Trigger: GCCTCGCAGTATTCCGATTCACTCCTGCCCCAAGTG...AACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATAGGGACAAGCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | CTGCAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAATGCCAGAGCCTGCTCTaGCAGCTCCAGCTTCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: LQPFWLTAHSDSHEQNIKCQSLL*QLQLLA Trigger: AGCGAGAAGCTGGAGCTGGCAGAGCAGGCTCTGGCA...TTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | CTGAGACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTAATCTTCTCTCTTGCTaGTCTCTCAGCGTGAAAATC | + |
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Preference number: 4 (lower is better) Translates to: LRRCAIGQHSHSSHTFPPNLLSC*SLSVKI Trigger: GATTTTCACGCTGAGAGAGCAGCAAGAGAGAAGATT...AGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CCA 90 bp | TGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACACTGGCTGGCGGAGGGTCCATTTCCTaGGGTCTCACAAGGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: WLTAHSDSHEQNIKTLAGGGSIS*GLTRAV Trigger: GACAGCCCTTGTGAGACCCCAGGAAATGGACCCTCC...GCCAGCCAGTGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR TCA 90 bp | ATTAAACTATGTACTGTACTATCCTGTACAGCTCCAGTACGGAGCCTGAGGGTAGCAGCTCCTCAGGGGTaGATGTGTCCAGGCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: IKLCTVLSCTAPVRSLRVAAPQG*MCPGWG Trigger: ACCCCAGCCTGGACACATTCACCCCTGAGGAGCTGC...TACCCTCAGGCTCCGTACTGGAGCTGTACAGGATAGTACAGTACATAGTTTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR TCA 90 bp | CAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACACAGTACACCTCCATCTaGGCCCTGAGGACGGCCATG | + |
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Preference number: 4 (lower is better) Translates to: QPFWLTAHSDSHEQNIKTQYTSI*ALRTAM Trigger: CATGGCCGTCCTCAGGGCTCAGATGGAGGTGTACTG...TGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | CAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACAGATGCCCAGCAGGTCTaGCTTTTCAGCCCGAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: QPFWLTAHSDSHEQNIKTDAQQV*LFSPKA Trigger: CGCCTTCGGGCTGAAAAGGCAGACCTGCTGGGCATC...TGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | GTCAGAAAGAGCCACATGGAACTTCCACAGAATTACACACACAACAAGATGCCCGATGCCCAGCAGGTCTaGCTTTTCAGCCCGAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: VRKSHMELPQNYTHNKMPDAQQV*LFSPKA Trigger: CGCCTTCGGGCTGAAAAGGCAGACCTGCTGGGCATC...GGGCATCTTGTTGTGTGTGTAATTCTGTGGAAGTTCCATGTGGCTCTTTCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CCA 90 bp | TGTCCCTATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTCAGTCAGCCATCTGGAGCTGTTTaGATGCCAGAGCCTGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: CPYLSPVLVSTDTTVFSQPSGAV*MPEPAL Trigger: CAGAGCAGGCTCTGGCATCCAAACAGCTCCAGATGG...CTGACTGAACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATAGGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR TCA 90 bp | TATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTCAGTCAGAAAGAGGTGTCCAGGCTGGGGTaGACCATATTGGAGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLSPVLVSTDTTVFSQKEVSRLG*TILEGP Trigger: TGGACCCTCCAATATGGTTCACCCCAGCCTGGACAC...CTCTTTCTGACTGAACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAAGATGCTCCACTTCCTaGTCCACCTGGGTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQPFWLTAHSDSHEQNIKRCSTS*STWVFS Trigger: GCTGAAGACCCAGGTGGAGCAGGAAGTGGAGCATCT...TTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCCTATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTCAGTCAGACCTGGATCTTCAGATaGTCCACTTCCTGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: CPYLSPVLVSTDTTVFSQTWIFR*STSCST Trigger: GGTGGAGCAGGAAGTGGAGCATCTGAAGATCCAGGT...CTGACTGAACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATAGGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACAGGAGGGTCCATTTCCTaGGGTCTCACAAGGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QPFWLTAHSDSHEQNIKTGGSIS*GLTRAV Trigger: GACAGCCCTTGTGAGACCCCAGGAAATGGACCCTCC...TGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGCTTGTCCCTATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTTGGGGTGAACCATATTaGAGGGTCCATTTCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLTCPGVNRYHSVWGEPY*RVHFLG Trigger: CCCCAGGAAATGGACCCTCCAATATGGTTCACCCCA...AACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATAGGGACAAGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | AAACTATGTACTGTACTATCCTGTACAGCTCCAGTACGGAGCCTGAGGGTAATGCCTCCTCCAAGGCTCTaGGATACCTGTAGCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLCTVLSCTAPVRSLRVMPPPRL*DTCSHL Trigger: CAGGTGGCTACAGGTATCCCAGAGCCTTGGAGGAGG...CATTACCCTCAGGCTCCGTACTGGAGCTGTACAGGATAGTACAGTACATAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTTGTCCCTATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTCAACTTCCTGCTCCACCTaGGTCTTCAGCTTCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ELVPISHLSWCQQIPQCSTSCST*VFSFST Trigger: AGTGGAGAAGCTGAAGACCCAGGTGGAGCAGGAAGT...TGAACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATAGGGACAAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGCTTGTCCCTATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTACTTCCTGCTCCACCTaGGTCTTCAGCTTCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLTCPGVNRYHSVTSCST*VFSFST Trigger: AGTGGAGAAGCTGAAGACCCAGGTGGAGCAGGAAGT...AACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATAGGGACAAGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR TCA 90 bp | CCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACACTGTTTGAGCTGCAGTTCTaGGACGATGCCCAGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PFWLTAHSDSHEQNIKTLFELQF*DDAQQV Trigger: GACCTGCTGGGCATCGTCTCAGAACTGCAGCTCAAA...CAGTGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR TCA 90 bp | AAAACACTGCAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACTACAGTTGCTCAAGCTaGTGGGGTCTGTTCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTLQPFWLTAHSDSHEQNYSCSS*WGLFLW Trigger: CCACAAGAACAGACCCCATCAGCTTGAGCAACTGTA...GTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTGCAGTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | CACATGGAACTTCCACAGAATTACACACACAACAAGATGCCCACTAAGGGAAGAAGGCGCTCTTCCTTCTaGTTCTCTGTCCAGGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HMELPQNYTHNKMPTKGRRRSSF*FSVQAD Trigger: GTCCGCCTGGACAGAGAAGCAGAAGGAAGAGCGCCT...TCTTCCCTTAGTGGGCATCTTGTTGTGTGTGTAATTCTGTGGAAGTTCCATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTGGAGGAGAAATCTGGCATTTACCAAGAGCTTTGGGGACTGGAGAGAACAACCTGGATCTTCAGATaGTCCACTTCCTGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VLEEKSGIYQELWGLERTTWIFR*STSCST Trigger: GGTGGAGCAGGAAGTGGAGCATCTGAAGATCCAGGT...TGTTCTCTCCAGTCCCCAAAGCTCTTGGTAAATGCCAGATTTCTCCTCCAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTAATTAGATTCCTCTTTGTGACTTCCTGTCGGTCCAGAAGATGCTCTCCCGCAGTTCTGAGACGATaGCCAGCAGGTCTGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLIRFLFVTSCRSRRCSPAVLRR*PAGLPF Trigger: AAAAGGCAGACCTGCTGGGCATCGTCTCAGAACTGC...GGGAGAGCATCTTCTGGACCGACAGGAAGTCACAAAGAGGAATCTAATTAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTAATTAGATTCCTCTTTGTGACTTCCTGTCGGTCCAGAAGATGCTCTCCCGCAGAGTGGCTAACCTaGACTTCTCCTCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLIRFLFVTSCRSRRCSPAEWLT*TSPPLS Trigger: AGACAGAGGAGGAGAAGTCCAGGTTAGCCACTCTGC...GGGAGAGCATCTTCTGGACCGACAGGAAGTCACAAAGAGGAATCTAATTAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | CCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACACTGCCATCTGGAGCTGTTTaGATGCCAGAGCCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PFWLTAHSDSHEQNIKTLPSGAV*MPEPAL Trigger: CAGAGCAGGCTCTGGCATCCAAACAGCTCCAGATGG...CAGTGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | CCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACACTGAGTTCCTTCATTTGCTaGAGCAGCTCCTCAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFWLTAHSDSHEQNIKTLSSFIC*SSSSGV Trigger: CACCCCTGAGGAGCTGCTGCAGCAAATGAAGGAACT...CAGTGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACACTGGCTGGCTTATGTAGATGCTCCACTTCCTaGTCCACCTGGGTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAHSDSHEQNIKTLAGLCRCSTS*STWVFS Trigger: GCTGAAGACCCAGGTGGAGCAGGAAGTGGAGCATCT...ACATAAGCCAGCCAGTGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACACTGGCTGGCCTTCATCTCCTTCATTaGCCCTTCAGTCTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WLTAHSDSHEQNIKTLAGLHLLH*PFSLSF Trigger: GAAGGAGAGACTGAAGGGGCAATGAAGGAGATGAAG...GCCAGCCAGTGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | TTACCTAGAAAAACACTGCAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGTTGCCTGCAGAGTaGCTAACCTGGACTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPRKTLQPFWLTAHSDSHELPAE*LTWTSP Trigger: AGGAGAAGTCCAGGTTAGCCACTCTGCAGGCAACTC...ATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTGCAGTGTTTTTCTAGGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACATACAGTTGCTCAAGCTaGTGGGGTCTGTTCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPFWLTAHSDSHEQNIKTYSCSS*WGLFLW Trigger: CCACAAGAACAGACCCCATCAGCTTGAGCAACTGTA...TGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACACTGGCTGGCAACAGAGAGGTCACTTaGATGCTCAGTGTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: WLTAHSDSHEQNIKTLAGNREVT*MLSVST Trigger: AGTGGAAACACTGAGCATTCAAGTGACCTCTCTGTT...GCCAGCCAGTGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGAAGGGTGCTAATTAGATTCCTCTTTGTGACTTCCTGTCGGTCCAGAAGATCAGCTCAGCCTCACTaGGTTTTGTGTGTGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CGRVLIRFLFVTSCRSRRSAQPH*VLCVPL Trigger: AAGAGGCACACACAAAACTCAGTGAGGCTGAGCTGA...TCTTCTGGACCGACAGGAAGTCACAAAGAGGAATCTAATTAGCACCCTTCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR TCA 90 bp | GACAGAAGTACAAGTGTTGGAGGAGAAATCTGGCATTTACCAAGAGCTTTGGGGTCAGCTCAGCCTCACTaGGTTTTGTGTGTGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DRSTSVGGEIWHLPRALGSAQPH*VLCVPL Trigger: AAGAGGCACACACAAAACTCAGTGAGGCTGAGCTGA...CCCCAAAGCTCTTGGTAAATGCCAGATTTCTCCTCCAACACTTGTACTTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACAGAGTTGAGTTTGAGCTaGAGTTCTGAGACGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QPFWLTAHSDSHEQNIKTELSLS*SSETMP Trigger: GGGCATCGTCTCAGAACTGCAGCTCAAACTCAACTC...TGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | TTACCTAGAAAAACACTGCAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGCTCTCCTCGCTGTCTaGTTCTCAGTAGAAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRKTLQPFWLTAHSDSHALLAV*FSVEEW Trigger: CCATTCTTCTACTGAGAAGCAGACAGCGAGGAGAGC...ATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTGCAGTGTTTTTCTAGGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGAAGGGTGCTAATTAGATTCCTCTTTGTGACTTCCTGTCGGTCCAGAAGAGCTCTCCTCGCTGTCTaGTTCTCAGTAGAAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: CGRVLIRFLFVTSCRSRRALLAV*FSVEEW Trigger: CCATTCTTCTACTGAGAAGCAGACAGCGAGGAGAGC...TCTTCTGGACCGACAGGAAGTCACAAAGAGGAATCTAATTAGCACCCTTCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGAAAGAGCCACATGGAACTTCCACAGAATTACACACACAACAAGATGCCCTCCTCTGTCTTGGCCTaGTCCATCTTGATTTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRKSHMELPQNYTHNKMPSSVLA*SILISE Trigger: CTCCGAAATCAAGATGGAGCAGGCCAAGACAGAGGA...GGGCATCTTGTTGTGTGTGTAATTCTGTGGAAGTTCCATGTGGCTCTTTCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | TTACCTAGAAAAACACTGCAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGCTTCTTTCAGCTGGTaGTTCTCAACCAGGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPRKTLQPFWLTAHSDSHASFSW*FSTRSS Trigger: GGAACTCCTGGTTGAGAACCACCAGCTGAAAGAAGC...ATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTGCAGTGTTTTTCTAGGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | ACACCTTCCCTCCTGTCCTGCTACCCACTGTTAGGCTCTCAGTGTCTCAGACATGATTATTTAGCTTCATaGCTTCTTTCAGCTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPSLLSCYPLLGSQCLRHDYLAS*LLSAGG Trigger: ACCACCAGCTGAAAGAAGCCATGAAGCTAAATAATC...ATGTCTGAGACACTGAGAGCCTAACAGTGGGTAGCAGGACAGGAGGGAAGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR TCA 90 bp | AATATACAAATGATTACAGTCACTATTCTGTACAGATTATCCCTCCTGAGACGCCAGTACACCTCCATCTaGGCCCTGAGGACGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: NIQMITVTILYRLSLLRRQYTSI*ALRTAM Trigger: CATGGCCGTCCTCAGGGCTCAGATGGAGGTGTACTG...GCGTCTCAGGAGGGATAATCTGTACAGAATAGTGACTGTAATCATTTGTATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACACTGGCTGGCTTAACCTCTTTGCTTTaGATCTCAAACAACAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WLTAHSDSHEQNIKTLAGLTSLL*ISNNRR Trigger: GCGCCTGTTGTTTGAGATGCAAAGCAAAGAGGTTAA...GCCAGCCAGTGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | TTACCTAGAAAAACACTGCAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATCGCATGCTCTCCACCTaGAGCTCTAACTTCTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPRKTLQPFWLTAHSDSHRMLST*SSNFLL Trigger: TAACAAGAAGTTAGAGCTGCAGGTGGAGAGCATGCG...ATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTGCAGTGTTTTTCTAGGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGTACAAGTGTTGGAGGAGAAATCTGGCATTTACCAAGAGCTTTGGGGATCCTCTGTCTTGGCCTaGTCCATCTTGATTTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TEVQVLEEKSGIYQELWGSSVLA*SILISE Trigger: CTCCGAAATCAAGATGGAGCAGGCCAAGACAGAGGA...TCCCCAAAGCTCTTGGTAAATGCCAGATTTCTCCTCCAACACTTGTACTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGCTCTCCCTAGGAGGGGTACAGTGTGTCAAAAATATTTGTGATATATGTTTGGATGCCAGAGCCTaGTCTGCCAGCTCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KMLSLGGVQCVKNICDICLDARA*SASSSF Trigger: GAAGCTGGAGCTGGCAGAGCAGGCTCTGGCATCCAA...ACATATATCACAAATATTTTTGACACACTGTACCCCTCCTAGGGAGAGCATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | AAAACACTGCAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACAATCTTCTCTCTTGCTaGTCTCTCAGCGTGAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: KTLQPFWLTAHSDSHEQNNLLSC*SLSVKI Trigger: GATTTTCACGCTGAGAGAGCAGCAAGAGAGAAGATT...GTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTGCAGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | GACAGAAGTACAAGTGTTGGAGGAGAAATCTGGCATTTACCAAGAGCTTTGGGGATGGCTTCTTTCAGCTaGTGGTTCTCAACCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DRSTSVGGEIWHLPRALGMASFS*WFSTRS Trigger: ACTCCTGGTTGAGAACCACCAGCTGAAAGAAGCCAT...CCCCAAAGCTCTTGGTAAATGCCAGATTTCTCCTCCAACACTTGTACTTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACACTTCCAACACTCTCTTaGCCTTTGTCCTCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPFWLTAHSDSHEQNIKTLPTLS*PLSSFS Trigger: AGAGAAGGAGGACAAAGGCCAAGAGAGTGTTGGAAG...TGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR TCA 90 bp | GACAGAAGTACAAGTGTTGGAGGAGAAATCTGGCATTTACCAAGAGCTTTGGGGAACAGAGAGGTCACTTaGATGCTCAGTGTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DRSTSVGGEIWHLPRALGNREVT*MLSVST Trigger: AGTGGAAACACTGAGCATTCAAGTGACCTCTCTGTT...CCCCAAAGCTCTTGGTAAATGCCAGATTTCTCCTCCAACACTTGTACTTCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGAAGGGTGCTAATTAGATTCCTCTTTGTGACTTCCTGTCGGTCCAGAAGATTTGTGTGTGCCTCTTaGAGCTCCTTAAACAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CGRVLIRFLFVTSCRSRRFVCAS*SSLNRE Trigger: CTCTCTGTTTAAGGAGCTTCAAGAGGCACACACAAA...TCTTCTGGACCGACAGGAAGTCACAAAGAGGAATCTAATTAGCACCCTTCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAAGACAGAAGTACAAGTGTTGGAGGAGAAATCTGGCATTTACCAAGAGCTAGTTCCTTCATTTGCTaGAGCAGCTCCTCAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KEDRSTSVGGEIWHLPRASSFIC*SSSSGV Trigger: CACCCCTGAGGAGCTGCTGCAGCAAATGAAGGAACT...AGCTCTTGGTAAATGCCAGATTTCTCCTCCAACACTTGTACTTCTGTCTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTAATTAGATTCCTCTTTGTGACTTCCTGTCGGTCCAGAAGATGCTCTCCCATGAATCTTCTCTCTTaGTGCTCTCTCAGCGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLIRFLFVTSCRSRRCSPMNLLS*CSLSVK Trigger: TTTCACGCTGAGAGAGCAGCAAGAGAGAAGATTCAT...GGGAGAGCATCTTCTGGACCGACAGGAAGTCACAAAGAGGAATCTAATTAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGCTCTCCCTAGGAGGGGTACAGTGTGTCAAAAATATTTGTGATATATGTAGAGTCACTGGTTCTTaGCCCGTGTCGGCACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KMLSLGGVQCVKNICDICRVTGS*PVSALH Trigger: ATGCAGTGCCGACACGGGGCAAGAACCAGTGACTCT...ACATATATCACAAATATTTTTGACACACTGTACCCCTCCTAGGGAGAGCATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGAACTTCCACAGAATTACACACACAACAAGATGCCCACTAAGGGAAGACTTCCAACACTCTCTTaGCCTTTGTCCTCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HMELPQNYTHNKMPTKGRLPTLS*PLSSFS Trigger: AGAGAAGGAGGACAAAGGCCAAGAGAGTGTTGGAAG...TCTTCCCTTAGTGGGCATCTTGTTGTGTGTGTAATTCTGTGGAAGTTCCATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | TCTCATGAGCAGAACATAAAAACACTGGCTGGCTTATGTGGAAGGGTGCTAATTCGCATGCTCTCCACCTaGAGCTCTAACTTCTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SHEQNIKTLAGLCGRVLIRMLST*SSNFLL Trigger: TAACAAGAAGTTAGAGCTGCAGGTGGAGAGCATGCG...AATTAGCACCCTTCCACATAAGCCAGCCAGTGTTTTTATGTTCTGCTCATGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACAATGAATCTTCTCTCTTaGTGCTCTCTCAGCGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QPFWLTAHSDSHEQNIKTMNLLS*CSLSVK Trigger: TTTCACGCTGAGAGAGCAGCAAGAGAGAAGATTCAT...TGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CCA 90 bp | CAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACAGATTATTTAGCTTCATaGCTTCTTTCAGCTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPFWLTAHSDSHEQNIKTDYLAS*LLSAGG Trigger: ACCACCAGCTGAAAGAAGCCATGAAGCTAAATAATC...TGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | AAAACACTGCAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACTTCTCAGTAGAAGAATaGCCATTTGCTTTCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTLQPFWLTAHSDSHEQNFSVEE*PFAFFS Trigger: TGAAAAGAAAGCAAATGGCCATTCTTCTACTGAGAA...GTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTGCAGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | TATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTCAGTCAGAAAGAGACCTTTTCTGCCTGTTaGTTGGTTAGTTCTTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: YLSPVLVSTDTTVFSQKETFSAC*LVSSSI Trigger: AATTGAAGAACTAACCAAGCAACAGGCAGAAAAGGT...CTCTTTCTGACTGAACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CCA 90 bp | GTGCTAATTAGATTCCTCTTTGTGACTTCCTGTCGGTCCAGAAGATGCTCTCCCTTCTCAGTAGAAGAATaGCCATTTGCTTTCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLIRFLFVTSCRSRRCSPFSVEE*PFAFFS Trigger: TGAAAAGAAAGCAAATGGCCATTCTTCTACTGAGAA...GGGAGAGCATCTTCTGGACCGACAGGAAGTCACAAAGAGGAATCTAATTAGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACATTTCTGCCTGTTGCTTaGTTAGTTCTTCAATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QPFWLTAHSDSHEQNIKTFLPVA*LVLQLF Trigger: AAACAATTGAAGAACTAACCAAGCAACAGGCAGAAA...TGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR GCA 90 bp | AAAGAAGACAGAAGTACAAGTGTTGGAGGAGAAATCTGGCATTTACCAAGAGCTACCTTTTCTGCCTGTTaGTTGGTTAGTTCTTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: KEDRSTSVGGEIWHLPRATFSAC*LVSSSI Trigger: AATTGAAGAACTAACCAAGCAACAGGCAGAAAAGGT...AGCTCTTGGTAAATGCCAGATTTCTCCTCCAACACTTGTACTTCTGTCTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
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| 3UTR CAA 72 bp | ATATATGTGACAATAAAGAAGACAGAAGTACAAGTGTaGGAGGAGAAATCTGGCATTTACCAAGAGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IYVTIKKTEVQV*EEKSGIYQELW Trigger: CCAAAGCTCTTGGTAAATGCCAGATTTCTCCTCCAACACTTGTACTTCTGTCTTCTTTATTGTCACATATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
||
| CDS-3UTR CCA 90 bp | AATATACAAATGATTACAGTCACTATTCTGTACAGATTATCCCTCCTGAGACGCTTTCTGCCTGTTGCTTaGTTAGTTCTTCAATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NIQMITVTILYRLSLLRRFLPVA*LVLQLF Trigger: AAACAATTGAAGAACTAACCAAGCAACAGGCAGAAA...GCGTCTCAGGAGGGATAATCTGTACAGAATAGTGACTGTAATCATTTGTATATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CCA 90 bp | CATGGATCTGAAGCGTGTCGATGTCCGGCAGGACCTCCCCGCACTTaGGGCAGGAGTGAATCGGAATACTGCGAGGCTGCTGCCCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HGSEACRCPAGPPRT*GRSESEYCEAAARA Trigger: AGCACGGGCAGCAGCCTCGCAGTATTCCGATTCACTCCTGCCCCAAGTGCGGGGAGGTCCTGCCGGACATCGACACGCTTCAGATCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS TCA 90 bp | GGAGTCTTCCGAGGAGCCGCCGGAGTTGAGTTTGAGCTGCAGTTCTaGGACGATGCCCAGCAGGTCTGCCTTTTCAGCCCGAAGGCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GVFRGAAGVEFELQF*DDAQQVCLFSPKAH Trigger: ATGCGCCTTCGGGCTGAAAAGGCAGACCTGCTGGGCATCGTCTCAGAACTGCAGCTCAAACTCAACTCCGGCGGCTCCTCGGAAGACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CCA 90 bp | ACGATGCCCAGCAGGTCTGCCTTTTCAGCCCGAAGGCGCATCACCTaGATCTTCAGATGCTCCACTTCCTGCTCCACCTGGGTCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TMPSRSAFSARRRIT*IFRCSTSCSTWVFS Trigger: GCTGAAGACCCAGGTGGAGCAGGAAGTGGAGCATCTGAAGATCCAGGTGATGCGCCTTCGGGCTGAAAAGGCAGACCTGCTGGGCATCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS GCA 90 bp | TCAACGAAGGAGTCTTCCGAGGAGCCGCCGGAGTTGAGTTTGAGCTaGAGTTCTGAGACGATGCCCAGCAGGTCTGCCTTTTCAGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: STKESSEEPPELSLS*SSETMPSRSAFSAR Trigger: TCGGGCTGAAAAGGCAGACCTGCTGGGCATCGTCTCAGAACTGCAGCTCAAACTCAACTCCGGCGGCTCCTCGGAAGACTCCTTCGTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS GCA 90 bp | GCCTGCAGAGTGGCTAACCTGGACTTCTCCTCCTCTGTCTTGGCCTaGTCCATCTTGATTTCGGAGCGCATGCTCTCCACCTGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ACRVANLDFSSSVLA*SILISERMLSTCSS Trigger: AGAGCTGCAGGTGGAGAGCATGCGCTCCGAAATCAAGATGGAGCAGGCCAAGACAGAGGAGGAGAAGTCCAGGTTAGCCACTCTGCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS CCA 90 bp | GAATGTGTCCAGGCTGGGGTGAACCATATTGGAGGGTCCATTTCCTaGGGTCTCACAAGGGCTGTCCCCCTTCTCAGTCAGGCAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ECVQAGVNHIGGSIS*GLTRAVPLLSQAAQ Trigger: CTGAGCTGCCTGACTGAGAAGGGGGACAGCCCTTGTGAGACCCCAGGAAATGGACCCTCCAATATGGTTCACCCCAGCCTGGACACATTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CAA 90 bp | CTGAGACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTGCTTCCAACACTCTCTaGGCCTTTGTCCTCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRRCAIGQHSHSSHTFPPASNTL*AFVLLL Trigger: GAGAAGGAGGACAAAGGCCAAGAGAGTGTTGGAAGC...AGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS TCA 90 bp | GCTGTTTGGATGCCAGAGCCTGCTCTGCCAGCTCCAGCTTCTCGCTaGGCTCCTGCAGCAACATCTTGTCCACCTTTTCTGCCTGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVWMPEPALPAPASR*APAATSCPPFLPVA Trigger: AGCAACAGGCAGAAAAGGTGGACAAGATGTTGCTGCAGGAGCTCAGCGAGAAGCTGGAGCTGGCAGAGCAGGCTCTGGCATCCAAACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS GCA 90 bp | GATGCCAGAGCCTGCTCTGCCAGCTCCAGCTTCTCGCTGAGCTCCTaGAGCAACATCTTGTCCACCTTTTCTGCCTGTTGCTTGGTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: DARACSASSSFSLSS*SNILSTFSACCLVS Trigger: ACTAACCAAGCAACAGGCAGAAAAGGTGGACAAGATGTTGCTGCAGGAGCTCAGCGAGAAGCTGGAGCTGGCAGAGCAGGCTCTGGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS CCA 90 bp | CCTCGGCTCCTCTTTGAAACAGGTAAGTCTGCTGGTCAGAGTCACTaGTTCTTGCCCCGTGTCGGCACTGCATTTCCATCAGGGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PRLLFETGKSAGQSH*FLPRVGTAFPSGTV Trigger: GACAGTCCCTGATGGAAATGCAGTGCCGACACGGGGCAAGAACCAGTGACTCTGACCAGCAGACTTACCTGTTTCAAAGAGGAGCCGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS TCA 90 bp | TCTCAACCAGGAGTTCCTTCATTTGCTGCAGCAGCTCCTCAGGGGTaGATGTGTCCAGGCTGGGGTGAACCATATTGGAGGGTCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQPGVPSFAAAAPQG*MCPGWGEPYWRVHF Trigger: GAAATGGACCCTCCAATATGGTTCACCCCAGCCTGGACACATTCACCCCTGAGGAGCTGCTGCAGCAAATGAAGGAACTCCTGGTTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS GCA 90 bp | TCCTCTTTGAAACAGGTAAGTCTGCTGGTCAGAGTCACTGGTTCTTaGCCCGTGTCGGCACTGCATTTCCATCAGGGACTGTCTACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLKQVSLLVRVTGS*PVSALHFHQGLSTA Trigger: GGCAGTAGACAGTCCCTGATGGAAATGCAGTGCCGACACGGGGCAAGAACCAGTGACTCTGACCAGCAGACTTACCTGTTTCAAAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CAA 90 bp | CTGAGCTTGTCCCTATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTCCGCCGGAGTTGAGTTaGAGCTGCAGTTCTGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: LSLSLSLTCPGVNRYHSVPPELS*SCSSET Trigger: CGTCTCAGAACTGCAGCTCAAACTCAACTCCGGCGG...AACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATAGGGACAAGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CAA 90 bp | TGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACACTGGCTGGCGAGGAGCCGCCGGAGTaGAGTTTGAGCTGCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WLTAHSDSHEQNIKTLAGEEPPE*SLSCSS Trigger: AGAACTGCAGCTCAAACTCAACTCCGGCGGCTCCTC...GCCAGCCAGTGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS GCA 90 bp | GGGGTCTGTTCTTGTGGGTGTAGGGCAGTTCTTCATCTCCTTCATTaGCCCTTCAGTCTCTCCTTCGGTCATCCTGATCTCAACGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GVCSCGCRAVLHLLH*PFSLSFGHPDLNEG Trigger: TCCTTCGTTGAGATCAGGATGACCGAAGGAGAGACTGAAGGGGCAATGAAGGAGATGAAGAACTGCCCTACACCCACAAGAACAGACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CAA 90 bp | GTGTTGGAGGAGAAATCTGGCATTTACCAAGAGCTTTGGGGACTGGAGAGAACACCGCCGGAGTTGAGTTaGAGCTGCAGTTCTGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: VLEEKSGIYQELWGLERTPPELS*SCSSET Trigger: CGTCTCAGAACTGCAGCTCAAACTCAACTCCGGCGG...TGTTCTCTCCAGTCCCCAAAGCTCTTGGTAAATGCCAGATTTCTCCTCCAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
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| CDS-3UTR CAA 90 bp | ACACCTTCCCTCCTGTCCTGCTACCCACTGTTAGGCTCTCAGTGTCTCAGACATTCAGCTCTGATGGTGTaGCAGAGTTCTTCCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPSLLSCYPLLGSQCLRHSALMV*QSSSSP Trigger: TGGAGAGGAAGAACTCTGCAACACCATCAGAGCTGA...ATGTCTGAGACACTGAGAGCCTAACAGTGGGTAGCAGGACAGGAGGGAAGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CAA 90 bp | CTGAGACGCTGTGCCATCGGCCAGCACTCTCACTCTTCCCACACCTTCCCTCCTTGCCTTATTATGTTCTaGAAGGAGCTTGTTGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRRCAIGQHSHSSHTFPPCLIMF*KELVVS Trigger: ACTCACAACAAGCTCCTTCAAGAACATAATAAGGCA...AGGAGGGAAGGTGTGGGAAGAGTGAGAGTGCTGGCCGATGGCACAGCGTCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS TCA 90 bp | TTCTTCATGAATCTTCTCTCTTGCTGCTCTCTCAGCGTGAAAATCTaGGCAGTACACCTCCATCTGAGCCCTGAGGACGGCCATGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FFMNLLSCCSLSVKI*AVHLHLSPEDGHGL Trigger: GAGACCATGGCCGTCCTCAGGGCTCAGATGGAGGTGTACTGCTCAGATTTTCACGCTGAGAGAGCAGCAAGAGAGAAGATTCATGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS GCA 90 bp | TTCGCTTCCAACACTCTCTTGGCCTTTGTCCTCCTTCTCTCTGTCTaGTCTCCTCGCTGTCTGCTTCTCAGTAGAAGAATGGCCATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FASNTLLAFVLLLSV*SPRCLLLSRRMAIC Trigger: GCAAATGGCCATTCTTCTACTGAGAAGCAGACAGCGAGGAGAGCAGACAGAGAGAAGGAGGACAAAGGCCAAGAGAGTGTTGGAAGCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CAA 90 bp | GTGCTAATTAGATTCCTCTTTGTGACTTCCTGTCGGTCCAGAAGATGCTCTCCCCAGGAGTTCCTTCATTaGCTGCAGCAGCTCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLIRFLFVTSCRSRRCSPQEFLH*LQQLLR Trigger: CCTGAGGAGCTGCTGCAGCAAATGAAGGAACTCCTG...GGGAGAGCATCTTCTGGACCGACAGGAAGTCACAAAGAGGAATCTAATTAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CAA 90 bp | TGTCCCTATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTCAGTCAGGTCCTCGGCTCCTCTTaGAAACAGGTAAGTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPYLSPVLVSTDTTVFSQVLGSS*KQVSLL Trigger: CAGCAGACTTACCTGTTTCAAAGAGGAGCCGAGGAC...CTGACTGAACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATAGGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS GCA 90 bp | TTCTTGCCCCGTGTCGGCACTGCATTTCCATCAGGGACTGTCTACTaGCTCCCTCTTCAATGTCATTGTTCTCTTTCAGCAAAATCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: FLPRVGTAFPSGTVY*LPLQCHCSLSAKSR Trigger: TCGCGATTTTGCTGAAAGAGAACAATGACATTGAAGAGGGAGGCAGTAGACAGTCCCTGATGGAAATGCAGTGCCGACACGGGGCAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CAA 90 bp | TGTGGAAGGGTGCTAATTAGATTCCTCTTTGTGACTTCCTGTCGGTCCAGAAGACAGGAGTTCCTTCATTaGCTGCAGCAGCTCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CGRVLIRFLFVTSCRSRRQEFLH*LQQLLR Trigger: CCTGAGGAGCTGCTGCAGCAAATGAAGGAACTCCTG...TCTTCTGGACCGACAGGAAGTCACAAAGAGGAATCTAATTAGCACCCTTCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CAA 90 bp | ACACCTTCCCTCCTGTCCTGCTACCCACTGTTAGGCTCTCAGTGTCTCAGACATCTTAACCTCTTTGCTTaGCATCTCAAACAACAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TPSLLSCYPLLGSQCLRHLNLFA*HLKQQA Trigger: CGCCTGTTGTTTGAGATGCAAAGCAAAGAGGTTAAG...ATGTCTGAGACACTGAGAGCCTAACAGTGGGTAGCAGGACAGGAGGGAAGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS-3UTR CAA 90 bp | TTACCTAGAAAAACACTGCAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATTCCATCTGGAGCTGTTaGGATGCCAGAGCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPRKTLQPFWLTAHSDSHSIWSC*DARACS Trigger: AGAGCAGGCTCTGGCATCCAAACAGCTCCAGATGGA...ATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTGCAGTGTTTTTCTAGGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS GCA 90 bp | TTAACCTCTTTGCTTTGCATCTCAAACAACAGGCGCTCTTCCTTCTaGTTCTCTGTCCAGGCGGACAGCTCCTCAAATCGCCCTTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: LTSLLCISNNRRSSF*FSVQADSSSNRPFI Trigger: TATGAAAGGGCGATTTGAGGAGCTGTCCGCCTGGACAGAGAAGCAGAAGGAAGAGCGCCTGTTGTTTGAGATGCAAAGCAAAGAGGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTAATTAGATTCCTCTTTGTGACTTCCTGTCGGTCCAGAAGATGCTCTCCCTCAGCTCTGATGGTGTaGCAGAGTTCTTCCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLIRFLFVTSCRSRRCSPSALMV*QSSSSP Trigger: TGGAGAGGAAGAACTCTGCAACACCATCAGAGCTGA...GGGAGAGCATCTTCTGGACCGACAGGAAGTCACAAAGAGGAATCTAATTAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | TATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTCAGTCAGAAAGAGACACTCTCTTGGCCTTaGTCCTCCTTCTCTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: YLSPVLVSTDTTVFSQKETLSWP*SSFSLS Trigger: AGACAGAGAGAAGGAGGACAAAGGCCAAGAGAGTGT...CTCTTTCTGACTGAACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACATAAAACATGAATCTTCTCTCTaGCTGCTCTCTCAGCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQPFWLTAHSDSHEQNIKHESSL*LLSQRE Trigger: TTCACGCTGAGAGAGCAGCAAGAGAGAAGATTCATG...TTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | ACACCTTCCCTCCTGTCCTGCTACCCACTGTTAGGCTCTCAGTGTCTCAGACATCCCTCTTCAATGTCATaGTTCTCTTTCAGCAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: TPSLLSCYPLLGSQCLRHPSSMS*FSFSKI Trigger: GATTTTGCTGAAAGAGAACAATGACATTGAAGAGGG...ATGTCTGAGACACTGAGAGCCTAACAGTGGGTAGCAGGACAGGAGGGAAGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAAATTAAACTATGTACTGTACTATCCTGTACAGCTCCAGTACGGAGCCTGGAGGAGCCGCCGGAGTaGAGTTTGAGCTGCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKIKLCTVLSCTAPVRSLEEPPE*SLSCSS Trigger: AGAACTGCAGCTCAAACTCAACTCCGGCGGCTCCTC...CAGGCTCCGTACTGGAGCTGTACAGGATAGTACAGTACATAGTTTAATTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | AAACTATGTACTGTACTATCCTGTACAGCTCCAGTACGGAGCCTGAGGGTAATGTCTTCATCTCCTTCATaGCCCCTTCAGTCTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KLCTVLSCTAPVRSLRVMSSSPS*PLQSLL Trigger: AAGGAGAGACTGAAGGGGCAATGAAGGAGATGAAGA...CATTACCCTCAGGCTCCGTACTGGAGCTGTACAGGATAGTACAGTACATAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACACTGGCTGGCTTATGTACACTCTCTTGGCCTTaGTCCTCCTTCTCTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TAHSDSHEQNIKTLAGLCTLSWP*SSFSLS Trigger: AGACAGAGAGAAGGAGGACAAAGGCCAAGAGAGTGT...ACATAAGCCAGCCAGTGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | AAAACACTGCAGCCATTCTGGCTGACTGCTCACAGTGACTCTCATGAGCAGAACTTTTGTGTGTGCCTCTaGAAGCTCCTTAAACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KTLQPFWLTAHSDSHEQNFCVCL*KLLKQR Trigger: TCTCTGTTTAAGGAGCTTCAAGAGGCACACACAAAA...GTTCTGCTCATGAGAGTCACTGTGAGCAGTCAGCCAGAATGGCTGCAGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | TATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTCAGTCAGAAAGAGCATGAATCTTCTCTCTaGCTGCTCTCTCAGCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: YLSPVLVSTDTTVFSQKEHESSL*LLSQRE Trigger: TTCACGCTGAGAGAGCAGCAAGAGAGAAGATTCATG...CTCTTTCTGACTGAACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | TCTCATGAGCAGAACATAAAAACACTGGCTGGCTTATGTGGAAGGGTGCTAATTGTCCTCGGCTCCTCTTaGAAACAGGTAAGTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SHEQNIKTLAGLCGRVLIVLGSS*KQVSLL Trigger: CAGCAGACTTACCTGTTTCAAAGAGGAGCCGAGGAC...AATTAGCACCCTTCCACATAAGCCAGCCAGTGTTTTTATGTTCTGCTCATGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS GCA 90 bp | TTGAAGTCTCTTCTTCATCAGCTCAGCCTCACTGAGTTTTGTGTGTaGCTCTTGAAGCTCCTTAAACAGAGAGGTCACTTGAATGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LKSLLHQLSLTEFCV*LLKLLKQRGHLNAQ Trigger: CTGAGCATTCAAGTGACCTCTCTGTTTAAGGAGCTTCAAGAGGCACACACAAAACTCAGTGAGGCTGAGCTGATGAAGAAGAGACTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | AAACTATGTACTGTACTATCCTGTACAGCTCCAGTACGGAGCCTGAGGGTAATGCTTAACCTCTTTGCTTaGCATCTCAAACAACAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KLCTVLSCTAPVRSLRVMLNLFA*HLKQQA Trigger: CGCCTGTTGTTTGAGATGCAAAGCAAAGAGGTTAAG...CATTACCCTCAGGCTCCGTACTGGAGCTGTACAGGATAGTACAGTACATAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | AAACTATGTACTGTACTATCCTGTACAGCTCCAGTACGGAGCCTGAGGGTAATGCGCTCCTTAACCTCTTaGCTTTGCATCTCAAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: KLCTVLSCTAPVRSLRVMRSLTS*LCISNN Trigger: GTTGTTTGAGATGCAAAGCAAAGAGGTTAAGGAGCG...CATTACCCTCAGGCTCCGTACTGGAGCTGTACAGGATAGTACAGTACATAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | AAACTATGTACTGTACTATCCTGTACAGCTCCAGTACGGAGCCTGAGGGTAATGTCTGAAATTCTTTCTTaGGCTTCTCTGAGGGCGACT | + |
|
Preference number: 5 (lower is better) Translates to: KLCTVLSCTAPVRSLRVMSEILS*ASLRAT Trigger: AGTCGCCCTCAGAGAAGCCAAAGAAAGAATTTCAGA...CATTACCCTCAGGCTCCGTACTGGAGCTGTACAGGATAGTACAGTACATAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAAATTAAACTATGTACTGTACTATCCTGTACAGCTCCAGTACGGAGCCTGTCCATCTGGAGCTGTTaGGATGCCAGAGCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKIKLCTVLSCTAPVRSLSIWSC*DARACS Trigger: AGAGCAGGCTCTGGCATCCAAACAGCTCCAGATGGA...CAGGCTCCGTACTGGAGCTGTACAGGATAGTACAGTACATAGTTTAATTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | TCTCATGAGCAGAACATAAAAACACTGGCTGGCTTATGTGGAAGGGTGCTAATTTCTTCATCTCCTTCATaGCCCCTTCAGTCTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SHEQNIKTLAGLCGRVLISSSPS*PLQSLL Trigger: AAGGAGAGACTGAAGGGGCAATGAAGGAGATGAAGA...AATTAGCACCCTTCCACATAAGCCAGCCAGTGTTTTTATGTTCTGCTCATGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCTCACAGTGACTCTCATGAGCAGAACATAAAAACACTGGCTGGCTTATGTTCTGAAATTCTTTCTTaGGCTTCTCTGAGGGCGACT | + |
|
Preference number: 5 (lower is better) Translates to: TAHSDSHEQNIKTLAGLCSEILS*ASLRAT Trigger: AGTCGCCCTCAGAGAAGCCAAAGAAAGAATTTCAGA...ACATAAGCCAGCCAGTGTTTTTATGTTCTGCTCATGAGAGTCACTGTGAGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | AAGATGCTCTCCCTAGGAGGGGTACAGTGTGTCAAAAATATTTGTGATATATGTGCTTCCAACACTCTCTaGGCCTTTGTCCTCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KMLSLGGVQCVKNICDICASNTL*AFVLLL Trigger: GAGAAGGAGGACAAAGGCCAAGAGAGTGTTGGAAGC...ACATATATCACAAATATTTTTGACACACTGTACCCCTCCTAGGGAGAGCATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGCTTGTCCCTATCTCTCACCTGTCCTGGTGTCAACAGATACCACAGTGTTTTTTCTGCCTGTTGCTaGGTTAGTTCTTCAATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSLSLSLTCPGVNRYHSVFSACC*VSSSIV Trigger: AACAATTGAAGAACTAACCAAGCAACAGGCAGAAAA...AACACTGTGGTATCTGTTGACACCAGGACAGGTGAGAGATAGGGACAAGCTCAG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | AAGATGCTCTCCCTAGGAGGGGTACAGTGTGTCAAAAATATTTGTGATATATGTTTCTCCTCCTCTGTCTaGGCCTGCTCCATCTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: KMLSLGGVQCVKNICDICFSSSV*ACSILI Trigger: AATCAAGATGGAGCAGGCCAAGACAGAGGAGGAGAA...ACATATATCACAAATATTTTTGACACACTGTACCCCTCCTAGGGAGAGCATCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | AATATACAAATGATTACAGTCACTATTCTGTACAGATTATCCCTCCTGAGACGCTTCTCCTCCTCTGTCTaGGCCTGCTCCATCTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: NIQMITVTILYRLSLLRRFSSSV*ACSILI Trigger: AATCAAGATGGAGCAGGCCAAGACAGAGGAGGAGAA...GCGTCTCAGGAGGGATAATCTGTACAGAATAGTGACTGTAATCATTTGTATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGTACAAGTGTTGGAGGAGAAATCTGGCATTTACCAAGAGCTTTGGGGATGCCTTATTATGTTCTaGAAGGAGCTTGTTGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TEVQVLEEKSGIYQELWGCLIMF*KELVVS Trigger: ACTCACAACAAGCTCCTTCAAGAACATAATAAGGCA...TCCCCAAAGCTCTTGGTAAATGCCAGATTTCTCCTCCAACACTTGTACTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGAAAGAGCCACATGGAACTTCCACAGAATTACACACACAACAAGATGCCCTTTTCTGCCTGTTGCTaGGTTAGTTCTTCAATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VRKSHMELPQNYTHNKMPFSACC*VSSSIV Trigger: AACAATTGAAGAACTAACCAAGCAACAGGCAGAAAA...GGGCATCTTGTTGTGTGTGTAATTCTGTGGAAGTTCCATGTGGCTCTTTCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAAGACAGAAGTACAAGTGTTGGAGGAGAAATCTGGCATTTACCAAGAGCTCCCTCTTCAATGTCATaGTTCTCTTTCAGCAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: KEDRSTSVGGEIWHLPRAPSSMS*FSFSKI Trigger: GATTTTGCTGAAAGAGAACAATGACATTGAAGAGGG...AGCTCTTGGTAAATGCCAGATTTCTCCTCCAACACTTGTACTTCTGTCTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
||
| CDS-3UTR CAA 90 bp | ATATATGTGACAATAAAGAAGACAGAAGTACAAGTGTTGGAGGAGAAATCTGGCTTTTGTGTGTGCCTCTaGAAGCTCCTTAAACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: IYVTIKKTEVQVLEEKSGFCVCL*KLLKQR Trigger: TCTCTGTTTAAGGAGCTTCAAGAGGCACACACAAAA...GCCAGATTTCTCCTCCAACACTTGTACTTCTGTCTTCTTTATTGTCACATATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114996.8 |
||
| CDS TCA 72 bp | CGAGGAGCCGCCGGAGTTGAGTTTGAGCTGCAGTTCTaGGACGATGCCCAGCAGGTCTGCCTTTTCAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RGAAGVEFELQF*DDAQQVCLFSP Trigger: CGGGCTGAAAAGGCAGACCTGCTGGGCATCGTCTCAGAACTGCAGCTCAAACTCAACTCCGGCGGCTCCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS CAA 90 bp | GTCATCCTGATCTCAACGAAGGAGTCTTCCGAGGAGCCGCCGGAGTaGAGTTTGAGCTGCAGTTCTGAGACGATGCCCAGCAGGTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VILISTKESSEEPPE*SLSCSSETMPSRSA Trigger: GGCAGACCTGCTGGGCATCGTCTCAGAACTGCAGCTCAAACTCAACTCCGGCGGCTCCTCGGAAGACTCCTTCGTTGAGATCAGGATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CAA 90 bp | TCCTGCTTAGCGAGCGTCTGCTTCATCTCATCCATCTGGAGCTGTTaGGATGCCAGAGCCTGCTCTGCCAGCTCCAGCTTCTCGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCLASVCFISSIWSC*DARACSASSSFSLS Trigger: GCTCAGCGAGAAGCTGGAGCTGGCAGAGCAGGCTCTGGCATCCAAACAGCTCCAGATGGATGAGATGAAGCAGACGCTCGCTAAGCAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS TCA 72 bp | CCTTCATTGCCCCTTCAGTCTCTCCTTCGGTCATCCTaGTCTCAACGAAGGAGTCTTCCGAGGAGCCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PSLPLQSLLRSS*SQRRSLPRSRR Trigger: CCGGCGGCTCCTCGGAAGACTCCTTCGTTGAGATCAGGATGACCGAAGGAGAGACTGAAGGGGCAATGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS GCA 72 bp | GAGTCTTCCGAGGAGCCGCCGGAGTTGAGTTTGAGCTaGAGTTCTGAGACGATGCCCAGCAGGTCTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ESSEEPPELSLS*SSETMPSRSAF Trigger: AAAGGCAGACCTGCTGGGCATCGTCTCAGAACTGCAGCTCAAACTCAACTCCGGCGGCTCCTCGGAAGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS GCA 72 bp | GCCTGCTCTGCCAGCTCCAGCTTCTCGCTGAGCTCCTaGAGCAACATCTTGTCCACCTTTTCTGCCTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ACSASSSFSLSS*SNILSTFSACC Trigger: GCAACAGGCAGAAAAGGTGGACAAGATGTTGCTGCAGGAGCTCAGCGAGAAGCTGGAGCTGGCAGAGCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CCA 72 bp | AGCAGGTCTGCCTTTTCAGCCCGAAGGCGCATCACCTaGATCTTCAGATGCTCCACTTCCTGCTCCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRSAFSARRRIT*IFRCSTSCSTW Trigger: CCAGGTGGAGCAGGAAGTGGAGCATCTGAAGATCCAGGTGATGCGCCTTCGGGCTGAAAAGGCAGACCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CAA 72 bp | ACGAAGGAGTCTTCCGAGGAGCCGCCGGAGTTGAGTTaGAGCTGCAGTTCTGAGACGATGCCCAGCAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TKESSEEPPELS*SCSSETMPSRS Trigger: AGACCTGCTGGGCATCGTCTCAGAACTGCAGCTCAAACTCAACTCCGGCGGCTCCTCGGAAGACTCCTTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CAA 72 bp | GCGAGCGTCTGCTTCATCTCATCCATCTGGAGCTGTTaGGATGCCAGAGCCTGCTCTGCCAGCTCCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASVCFISSIWSC*DARACSASSSF Trigger: GAAGCTGGAGCTGGCAGAGCAGGCTCTGGCATCCAAACAGCTCCAGATGGATGAGATGAAGCAGACGCTCGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS GCA 72 bp | TGGTCAGAGTCACTGGTTCTTGCCCCGTGTCGGCACTaGATTTCCATCAGGGACTGTCTACTGCCTCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: WSESLVLAPCRH*ISIRDCLLPPS Trigger: AGAGGGAGGCAGTAGACAGTCCCTGATGGAAATGCAGTGCCGACACGGGGCAAGAACCAGTGACTCTGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CCA 72 bp | CGAGCGTCTGCTTCATCTCATCCATCTGGAGCTGTTTaGATGCCAGAGCCTGCTCTGCCAGCTCCAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RASASSHPSGAV*MPEPALPAPAS Trigger: AGAAGCTGGAGCTGGCAGAGCAGGCTCTGGCATCCAAACAGCTCCAGATGGATGAGATGAAGCAGACGCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CAA 72 bp | CTGGACTTCTCCTCCTCTGTCTTGGCCTGCTCCATCTaGATTTCGGAGCGCATGCTCTCCACCTGCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LDFSSSVLACSI*ISERMLSTCSS Trigger: AGAGCTGCAGGTGGAGAGCATGCGCTCCGAAATCAAGATGGAGCAGGCCAAGACAGAGGAGGAGAAGTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CAA 90 bp | CATGGCTTCTTTCAGCTGGTGGTTCTCAACCAGGAGTTCCTTCATTaGCTGCAGCAGCTCCTCAGGGGTGAATGTGTCCAGGCTGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HGFFQLVVLNQEFLH*LQQLLRGECVQAGV Trigger: CACCCCAGCCTGGACACATTCACCCCTGAGGAGCTGCTGCAGCAAATGAAGGAACTCCTGGTTGAGAACCACCAGCTGAAAGAAGCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CAA 90 bp | CTGATCTCAACGAAGGAGTCTTCCGAGGAGCCGCCGGAGTTGAGTTaGAGCTGCAGTTCTGAGACGATGCCCAGCAGGTCTGCCTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LISTKESSEEPPELS*SCSSETMPSRSAFS Trigger: TGAAAAGGCAGACCTGCTGGGCATCGTCTCAGAACTGCAGCTCAAACTCAACTCCGGCGGCTCCTCGGAAGACTCCTTCGTTGAGATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS TCA 72 bp | TGGACTTCTCCTCCTCTGTCTTGGCCTGCTCCATCTTaGTTTCGGAGCGCATGCTCTCCACCTGCAGCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: WTSPPLSWPAPS*FRSACSPPAAL Trigger: TAGAGCTGCAGGTGGAGAGCATGCGCTCCGAAATCAAGATGGAGCAGGCCAAGACAGAGGAGGAGAAGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS GCA 72 bp | AGCTGGTGGTTCTCAACCAGGAGTTCCTTCATTTGCTaGAGCAGCTCCTCAGGGGTGAATGTGTCCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SWWFSTRSSFIC*SSSSGVNVSRL Trigger: CAGCCTGGACACATTCACCCCTGAGGAGCTGCTGCAGCAAATGAAGGAACTCCTGGTTGAGAACCACCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS GCA 72 bp | TTTTCAGCCCGAAGGCGCATCACCTGGATCTTCAGATaGTCCACTTCCTGCTCCACCTGGGTCTTCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FSARRRITWIFR*STSCSTWVFSF Trigger: GAAGCTGAAGACCCAGGTGGAGCAGGAAGTGGAGCATCTGAAGATCCAGGTGATGCGCCTTCGGGCTGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS CCA 72 bp | GGAGCTTGTTGTGAGTTGCCTGCAGAGTGGCTAACCTaGACTTCTCCTCCTCTGTCTTGGCCTGCTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: GACCELPAEWLT*TSPPLSWPAPS Trigger: AGATGGAGCAGGCCAAGACAGAGGAGGAGAAGTCCAGGTTAGCCACTCTGCAGGCAACTCACAACAAGCTCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS GCA 72 bp | AAACAGGTAAGTCTGCTGGTCAGAGTCACTGGTTCTTaGCCCGTGTCGGCACTGCATTTCCATCAGGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: KQVSLLVRVTGS*PVSALHFHQGL Trigger: CAGTCCCTGATGGAAATGCAGTGCCGACACGGGGCAAGAACCAGTGACTCTGACCAGCAGACTTACCTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS CAA 72 bp | GAAACAGGTAAGTCTGCTGGTCAGAGTCACTGGTTCTaGCCCCGTGTCGGCACTGCATTTCCATCAGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: ETGKSAGQSHWF*PRVGTAFPSGT Trigger: AGTCCCTGATGGAAATGCAGTGCCGACACGGGGCAAGAACCAGTGACTCTGACCAGCAGACTTACCTGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CAA 90 bp | CTCCTCTTTGAAACAGGTAAGTCTGCTGGTCAGAGTCACTGGTTCTaGCCCCGTGTCGGCACTGCATTTCCATCAGGGACTGTCTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLFETGKSAGQSHWF*PRVGTAFPSGTVYC Trigger: GCAGTAGACAGTCCCTGATGGAAATGCAGTGCCGACACGGGGCAAGAACCAGTGACTCTGACCAGCAGACTTACCTGTTTCAAAGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS TCA 72 bp | AATCTTCTCTCTTGCTGCTCTCTCAGCGTGAAAATCTaGGCAGTACACCTCCATCTGAGCCCTGAGGACGGC | + |
|
Preference number: 6 (lower is better) Translates to: NLLSCCSLSVKI*AVHLHLSPEDG Trigger: GCCGTCCTCAGGGCTCAGATGGAGGTGTACTGCTCAGATTTTCACGCTGAGAGAGCAGCAAGAGAGAAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS GCA 72 bp | TTGCTTTGCATCTCAAACAACAGGCGCTCTTCCTTCTaGTTCTCTGTCCAGGCGGACAGCTCCTCAAATCGC | + |
|
Preference number: 6 (lower is better) Translates to: LLCISNNRRSSF*FSVQADSSSNR Trigger: GCGATTTGAGGAGCTGTCCGCCTGGACAGAGAAGCAGAAGGAAGAGCGCCTGTTGTTTGAGATGCAAAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS CAA 72 bp | TTTCAGCTGGTGGTTCTCAACCAGGAGTTCCTTCATTaGCTGCAGCAGCTCCTCAGGGGTGAATGTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FQLVVLNQEFLH*LQQLLRGECVQ Trigger: CTGGACACATTCACCCCTGAGGAGCTGCTGCAGCAAATGAAGGAACTCCTGGTTGAGAACCACCAGCTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS CAA 90 bp | TGCATTTCCATCAGGGACTGTCTACTGCCTCCCTCTTCAATGTCATaGTTCTCTTTCAGCAAAATCGCGAGCTGCAAGGCCAGCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CISIRDCLLPPSSMS*FSFSKIASCKASCS Trigger: GGAGCAGCTGGCCTTGCAGCTCGCGATTTTGCTGAAAGAGAACAATGACATTGAAGAGGGAGGCAGTAGACAGTCCCTGATGGAAATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS CCA 72 bp | CTCTTTGAAACAGGTAAGTCTGCTGGTCAGAGTCACTaGTTCTTGCCCCGTGTCGGCACTGCATTTCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: LFETGKSAGQSH*FLPRVGTAFPS Trigger: TGATGGAAATGCAGTGCCGACACGGGGCAAGAACCAGTGACTCTGACCAGCAGACTTACCTGTTTCAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS CAA 72 bp | TCAAACTCCGCACAACTCCTGGCATCCTCTGTACAGTaGCTCAAGCTGATGGGGTCTGTTCTTGTGGGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SNSAQLLASSVQ*LKLMGSVLVGV Trigger: TACACCCACAAGAACAGACCCCATCAGCTTGAGCAACTGTACAGAGGATGCCAGGAGTTGTGCGGAGTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS CAA 72 bp | AGCTCCAGCTTCTCGCTGAGCTCCTGCAGCAACATCTaGTCCACCTTTTCTGCCTGTTGCTTGGTTAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSFSLSSCSNI*STFSACCLVSS Trigger: AGAACTAACCAAGCAACAGGCAGAAAAGGTGGACAAGATGTTGCTGCAGGAGCTCAGCGAGAAGCTGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS CAA 90 bp | TGCTCTGCCAGCTCCAGCTTCTCGCTGAGCTCCTGCAGCAACATCTaGTCCACCTTTTCTGCCTGTTGCTTGGTTAGTTCTTCAATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: CSASSSFSLSSCSNI*STFSACCLVSSSIV Trigger: AACAATTGAAGAACTAACCAAGCAACAGGCAGAAAAGGTGGACAAGATGTTGCTGCAGGAGCTCAGCGAGAAGCTGGAGCTGGCAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
||
| CDS GCA 72 bp | CGTGTCGGCACTGCATTTCCATCAGGGACTGTCTACTaGCTCCCTCTTCAATGTCATTGTTCTCTTTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RVGTAFPSGTVY*LPLQCHCSLSA Trigger: TGCTGAAAGAGAACAATGACATTGAAGAGGGAGGCAGTAGACAGTCCCTGATGGAAATGCAGTGCCGACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CAA 72 bp | AGTCAGGGCCTTAAGGCGCTCCTTAACCTCTTTGCTTaGCATCTCAAACAACAGGCGCTCTTCCTTCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SQGLKALLNLFA*HLKQQALFLLL Trigger: AAGCAGAAGGAAGAGCGCCTGTTGTTTGAGATGCAAAGCAAAGAGGTTAAGGAGCGCCTTAAGGCCCTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CAA 72 bp | GTGCCTTATTATGTTCTTGAAGGAGCTTGTTGTGAGTaGCCTGCAGAGTGGCTAACCTGGACTTCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VPYYVLEGACCE*PAEWLTWTSPP Trigger: AGGAGGAGAAGTCCAGGTTAGCCACTCTGCAGGCAACTCACAACAAGCTCCTTCAAGAACATAATAAGGCAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CAA 90 bp | ATTTTCATGAGTCAGGGCCTTAAGGCGCTCCTTAACCTCTTTGCTTaGCATCTCAAACAACAGGCGCTCTTCCTTCTGCTTCTCTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: IFMSQGLKALLNLFA*HLKQQALFLLLLCP Trigger: TGGACAGAGAAGCAGAAGGAAGAGCGCCTGTTGTTTGAGATGCAAAGCAAAGAGGTTAAGGAGCGCCTTAAGGCCCTGACTCATGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CAA 90 bp | GAGTTTTGTGTGTGCCTCTTGAAGCTCCTTAAACAGAGAGGTCACTaGAATGCTCAGTGTTTCCACTTCGCTTCCAACACTCTCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: EFCVCLLKLLKQRGH*NAQCFHFASNTLLA Trigger: GGCCAAGAGAGTGTTGGAAGCGAAGTGGAAACACTGAGCATTCAAGTGACCTCTCTGTTTAAGGAGCTTCAAGAGGCACACACAAAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CAA 90 bp | TTGTTTTCAGTGCCTTATTATGTTCTTGAAGGAGCTTGTTGTGAGTaGCCTGCAGAGTGGCTAACCTGGACTTCTCCTCCTCTGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LFSVPYYVLEGACCE*PAEWLTWTSPPLSW Trigger: CCAAGACAGAGGAGGAGAAGTCCAGGTTAGCCACTCTGCAGGCAACTCACAACAAGCTCCTTCAAGAACATAATAAGGCACTGAAAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS TCA 72 bp | GTTACTGTAAACGAGCTCTTGCTTTTCATTCAGCTCTaGTGGTGTTGCAGAGTTCTTCCTCTCCAGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: VTVNELLLFIQL*WCCRVLPLQSL Trigger: CAGGCTCTGGAGAGGAAGAACTCTGCAACACCATCAGAGCTGAATGAAAAGCAAGAGCTCGTTTACAGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS GCA 72 bp | CTTCTTCATCAGCTCAGCCTCACTGAGTTTTGTGTGTaGCTCTTGAAGCTCCTTAAACAGAGAGGTCACTTG | + |
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Preference number: 6 (lower is better) Translates to: LLHQLSLTEFCV*LLKLLKQRGHL Trigger: CAAGTGACCTCTCTGTTTAAGGAGCTTCAAGAGGCACACACAAAACTCAGTGAGGCTGAGCTGATGAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CAA 72 bp | GTGTGCCTCTTGAAGCTCCTTAAACAGAGAGGTCACTaGAATGCTCAGTGTTTCCACTTCGCTTCCAACACT | + |
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Preference number: 6 (lower is better) Translates to: VCLLKLLKQRGH*NAQCFHFASNT Trigger: AGTGTTGGAAGCGAAGTGGAAACACTGAGCATTCAAGTGACCTCTCTGTTTAAGGAGCTTCAAGAGGCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS GCA 72 bp | TCCTGCAGCAACATCTTGTCCACCTTTTCTGCCTGTTaGTTGGTTAGTTCTTCAATTGTTTTCAGTGCCTTA | + |
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Preference number: 6 (lower is better) Translates to: SCSNILSTFSAC*LVSSSIVFSAL Trigger: TAAGGCACTGAAAACAATTGAAGAACTAACCAAGCAACAGGCAGAAAAGGTGGACAAGATGTTGCTGCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CAA 90 bp | ACATCTTGTCCACCTTTTCTGCCTGTTGCTTGGTTAGTTCTTCAATaGTTTTCAGTGCCTTATTATGTTCTTGAAGGAGCTTGTTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: TSCPPFLPVAWLVLQ*FSVPYYVLEGACCE Trigger: CTCACAACAAGCTCCTTCAAGAACATAATAAGGCACTGAAAACAATTGAAGAACTAACCAAGCAACAGGCAGAAAAGGTGGACAAGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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| CDS CAA 72 bp | TGCAGCAACATCTTGTCCACCTTTTCTGCCTGTTGCTaGGTTAGTTCTTCAATTGTTTTCAGTGCCTTATTA | + |
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Preference number: 6 (lower is better) Translates to: CSNILSTFSACC*VSSSIVFSALL Trigger: TAATAAGGCACTGAAAACAATTGAAGAACTAACCAAGCAACAGGCAGAAAAGGTGGACAAGATGTTGCTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027986.5 ENSMUST00000114996.8 |
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