Pregenerated sensors for OPTC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010311Ensembl transcript IDs: ENSMUST00000124051.9, ENSMUST00000126123.2, ENSMUST00000149380.8, ENSMUST00000153617.9
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTCTCTCTCTCTCTCTGTCTCTGTGTGTGTGTGCGTGCGTGTTGTaGAATTTTGCAGCTGTGGCTCACAGGCTGCCTGGAACTTGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: CLSLSLSLCVCACVL*NFAAVAHRLPGTWA Trigger: AGCCCAAGTTCCAGGCAGCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACACACACAGAGACAGAGAGAGAGAGAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR GCA 90 bp | CTGTCTGTCTGTCTCTCTCTCTCTCTGTCTCTGTGTGTGTGTGCGTaGGTGTTGTGCAATTTTGCAGCTGTGGCTCACAGGCTGCCTGGA | + |
|
Preference number: 1 (lower is better) Translates to: LSVCLSLSLSLCVCA*VLCNFAAVAHRLPG Trigger: TCCAGGCAGCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACACACACAGAGACAGAGAGAGAGAGAGACAGACAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR GCA 90 bp | CTGTCTGTCTGTCTGTCTCTCTCTCTCTCTGTCTCTGTGTGTGTGTaGGTGCGTGTTGTGCAATTTTGCAGCTGTGGCTCACAGGCTGCC | + |
|
Preference number: 1 (lower is better) Translates to: LSVCLSLSLSVSVCV*VRVVQFCSCGSQAA Trigger: GGCAGCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACACACACAGAGACAGAGAGAGAGAGAGACAGACAGACAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR CCA 90 bp | CTGTGGCTCACAGGCTGCCTGGAACTTGGGCTACAGATGACTTTCTaGGTGCAGGTAAATAGTGCTCCCTCAGTGAGCCTCTTAGCACCA | + |
|
Preference number: 1 (lower is better) Translates to: LWLTGCLELGLQMTF*VQVNSAPSVSLLAP Trigger: TGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTACCTGCACCCAGAAAGTCATCTGTAGCCCAAGTTCCAGGCAGCCTGTGAGCCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR GCA 90 bp | TGTGTGCGTGCGTGTTGTGCAATTTTGCAGCTGTGGCTCACAGGCTaGCTGGAACTTGGGCTACAGATGACTTTCTGGGTGCAGGTAAAT | + |
|
Preference number: 1 (lower is better) Translates to: CVRACCAILQLWLTG*LELGLQMTFWVQVN Trigger: ATTTACCTGCACCCAGAAAGTCATCTGTAGCCCAAGTTCCAGGCAGCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR CCA 90 bp | CCATCCCTTTCTTTCATGGTTCTCCTGGAATTCTGTGTGGGAAGATaGGTGTGGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTG | + |
|
Preference number: 1 (lower is better) Translates to: PSLSFMVLLEFCVGR*VWRVWKRSLLWMLL Trigger: CAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCCACACCCATCTTCCCACACAGAATTCCAGGAGAACCATGAAAGAAAGGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR CCA 90 bp | CTTTCTTTCATGGTTCTCCTGGAATTCTGTGTGGGAAGATGGGTGTaGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTGTTCTCT | + |
|
Preference number: 1 (lower is better) Translates to: LSFMVLLEFCVGRWV*RVWKRSLLWMLLFS Trigger: AGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCCACACCCATCTTCCCACACAGAATTCCAGGAGAACCATGAAAGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR GCA 90 bp | AGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTCTGTGGCTCACAGGCTaGCTGGAACTTGGGCTACAG | + |
|
Preference number: 2 (lower is better) Translates to: SLPVRKTRLQHTDDSPPPLWLTG*LELGLQ Trigger: CTGTAGCCCAAGTTCCAGGCAGCCTGTGAGCCACAG...AGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR CAA 90 bp | GTCTGTCTCTCTCTCTCTCTGTCTCTGTGTGTGTGTGCGTGCGTGTaGTGCAATTTTGCAGCTGTGGCTCACAGGCTGCCTGGAACTTGG | + |
|
Preference number: 2 (lower is better) Translates to: VCLSLSLSLCVCACV*CNFAAVAHRLPGTW Trigger: CCAAGTTCCAGGCAGCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACACACACAGAGACAGAGAGAGAGAGAGACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR TCA 90 bp | GCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTCTGCAAATTAAGTGGCTaGAGGCCCTGTCTGTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: AYQSERPGFSTLMILLPLCKLSG*RPCLSV Trigger: GACAGACAGACAGGGCCTTCAGCCACTTAATTTGCA...GAGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTGTTCTCTGAGTCACTGTGGCTCACAGGCTaGCTGGAACTTGGGCTACAG | + |
|
Preference number: 2 (lower is better) Translates to: VWRVWKRSLLWMLLFSESLWLTG*LELGLQ Trigger: CTGTAGCCCAAGTTCCAGGCAGCCTGTGAGCCACAG...TGACTCAGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR CCA 90 bp | AGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTGCAATTTTGCAGCTGTaGCTCACAGGCTGCCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SLPVRKTRLQHTDDSPPPAILQL*LTGCLE Trigger: TTCCAGGCAGCCTGTGAGCCACAGCTGCAAAATTGC...AGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTCTGGGTGTGGAGAGTGTaGAAAAGATCTCTGCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: AYQSERPGFSTLMILLPLWVWRV*KRSLLW Trigger: CCACAGCAGAGATCTTTTCCACACTCTCCACACCCA...GAGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR GCA 90 bp | AGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTCGTGTTGTGCAATTTTaGAGCTGTGGCTCACAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SLPVRKTRLQHTDDSPPPRVVQF*SCGSQA Trigger: AGCCTGTGAGCCACAGCTGCAAAATTGCACAACACG...AGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR GCA 90 bp | AGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTGATCTCTGCTGTGGATaGTGCTGTTCTCTGAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SLPVRKTRLQHTDDSPPPDLCCG*CCSLSQ Trigger: CTGACTCAGAGAACAGCAGCATCCACAGCAGAGATC...AGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR CCA 90 bp | AGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTAGGCTGCCTGGAACTTaGGCTACAGATGACTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SLPVRKTRLQHTDDSPPPRLPGT*ATDDFL Trigger: CAGAAAGTCATCTGTAGCCCAAGTTCCAGGCAGCCT...AGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTCGTGGGAAGATGGGTGTaGAGAGTGTGGAAAAGATCT | + |
|
Preference number: 2 (lower is better) Translates to: AYQSERPGFSTLMILLPLVGRWV*RVWKRS Trigger: AGATCTTTTCCACACTCTCCACACCCATCTTCCCAC...GAGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR GCA 90 bp | AGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTCTGTGTGTGTGTGCGTaGGTGTTGTGCAATTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SLPVRKTRLQHTDDSPPPLCVCA*VLCNFA Trigger: TGCAAAATTGCACAACACGCACGCACACACACACAG...AGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTGTTCTCTGAGTCACGTGTTGTGCAATTTTaGAGCTGTGGCTCACAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: VWRVWKRSLLWMLLFSESRVVQF*SCGSQA Trigger: AGCCTGTGAGCCACAGCTGCAAAATTGCACAACACG...TGACTCAGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR GCA 90 bp | TCAGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCTGTGGAAAAGATCTCTaGTGTGGATGCTGCTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SAYQSERPGFSTLMILLPCGKDL*CGCCCS Trigger: AGAACAGCAGCATCCACAGCAGAGATCTTTTCCACA...GGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTGTTCTCTGAGTCAGGACTACAGATGACTTTCTaGGTGCAGGTAAATAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: WRVWKRSLLWMLLFSESGLQMTF*VQVNSA Trigger: AGCACTATTTACCTGCACCCAGAAAGTCATCTGTAG...TCCTGACTCAGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAATTCTGGAAAATGTAATTATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCTTCTGTGTGGGAAGATaGGTGTGGAGAGTGTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KILENVIISPVSLPVRKTFCVGR*VWRVWK Trigger: TTTCCACACTCTCCACACCCATCTTCCCACACAGAA...GGTCTTTCTGACTGGTAGGCTGACAGGACTGATAATTACATTTTCCAGAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR GCA 72 bp | GTCTCTGTGTGTGTGTGCGTGCGTGTTGTGCAATTTTaGAGCTGTGGCTCACAGGCTGCCTGGAACTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: VSVCVCVRVVQF*SCGSQAAWNLG Trigger: GCCCAAGTTCCAGGCAGCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACACACACAGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR CAA 90 bp | TACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTCCCTGCGTGTTGTGCAATTTaGCAGCTGTGGCTCACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: YQSERPGFSTLMILLPLPACCAI*QLWLTG Trigger: GCCTGTGAGCCACAGCTGCAAAATTGCACAACACGC...AGGGAGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR GCA 72 bp | GCGTGTTGTGCAATTTTGCAGCTGTGGCTCACAGGCTaGCTGGAACTTGGGCTACAGATGACTTTCTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: ACCAILQLWLTG*LELGLQMTFWV Trigger: CACCCAGAAAGTCATCTGTAGCCCAAGTTCCAGGCAGCCTGTGAGCCACAGCTGCAAAATTGCACAACACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR CCA 72 bp | ACAGGCTGCCTGGAACTTGGGCTACAGATGACTTTCTaGGTGCAGGTAAATAGTGCTCCCTCAGTGAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TGCLELGLQMTF*VQVNSAPSVSL Trigger: GAGGCTCACTGAGGGAGCACTATTTACCTGCACCCAGAAAGTCATCTGTAGCCCAAGTTCCAGGCAGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR CAA 90 bp | TACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTCCCTGTGTGTGCGTGCGTGTaGTGCAATTTTGCAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: YQSERPGFSTLMILLPLPVCACV*CNFAAV Trigger: CACAGCTGCAAAATTGCACAACACGCACGCACACAC...AGGGAGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR GCA 72 bp | TGTCTCTCTCTCTCTCTGTCTCTGTGTGTGTGTGCGTaGGTGTTGTGCAATTTTGCAGCTGTGGCTCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: CLSLSLSLCVCA*VLCNFAAVAHR Trigger: CCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACACACACAGAGACAGAGAGAGAGAGAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGCGTGTTGTGCAATTTaGCAGCTGTGGCTCACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: IISPVSLPVRKTRLQHTDACCAI*QLWLTG Trigger: GCCTGTGAGCCACAGCTGCAAAATTGCACAACACGC...ATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCTGACAGGACTGATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGTGTGTGCGTGCGTGTaGTGCAATTTTGCAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: IISPVSLPVRKTRLQHTDVCACV*CNFAAV Trigger: CACAGCTGCAAAATTGCACAACACGCACGCACACAC...ATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCTGACAGGACTGATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR CCA 72 bp | AGATGGGTGTGGAGAGTGTGGAAAAGATCTCTGCTGTaGATGCTGCTGTTCTCTGAGTCAGGAACCATAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RWVWRVWKRSLL*MLLFSESGTIR Trigger: CCTTATGGTTCCTGACTCAGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCCACACCCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR CCA 72 bp | ATGGTTCTCCTGGAATTCTGTGTGGGAAGATGGGTGTaGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: MVLLEFCVGRWV*RVWKRSLLWML Trigger: CAGCATCCACAGCAGAGATCTTTTCCACACTCTCCACACCCATCTTCCCACACAGAATTCCAGGAGAACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR CCA 72 bp | TCTTTCATGGTTCTCCTGGAATTCTGTGTGGGAAGATaGGTGTGGAGAGTGTGGAAAAGATCTCTGCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SFMVLLEFCVGR*VWRVWKRSLLW Trigger: CCACAGCAGAGATCTTTTCCACACTCTCCACACCCATCTTCCCACACAGAATTCCAGGAGAACCATGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGTGTGTGTGCGTGCGTGTTGTGCAATTTTGCAGCTGTGGCTCACAGGCGCAGAGAGCGCAGGCTaGGGGGCAAAGGCCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LCVCVRACCAILQLWLTGAESAG*GAKAQG Trigger: TCCCTGGGCCTTTGCCCCTCAGCCTGCGCTCTCTGC...GCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACACACACAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | CTTCAGCACACTGATGATTCTCCTCCCCCTCCCTCCTTCCCTCCCTCCTCCCCTGGCAGGGCTGCCAGCTaGTTCTCTGGAAGGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQHTDDSPPPPSFPPSSPGRAAS*FSGRIR Trigger: TCTGATCCTTCCAGAGAACCAGCTGGCAGCCCTGCC...AGGGGAGGAGGGAGGGAAGGAGGGAGGGGGAGGAGAATCATCAGTGTGCTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTGTTCTCTGAGTCAGGAGCAGAGAGCGCAGGCTaGGGGGCAAAGGCCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WRVWKRSLLWMLLFSESGAESAG*GAKAQG Trigger: TCCCTGGGCCTTTGCCCCTCAGCCTGCGCTCTCTGC...TCCTGACTCAGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR TCA 90 bp | GTAAATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGCAGAGAGCGCAGGCTaGGGGGCAAAGGCCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNSAPSVSLLAPSGKRRAAESAG*GAKAQG Trigger: TCCCTGGGCCTTTGCCCCTCAGCCTGCGCTCTCTGC...TGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGTGTGTGTGCGTGCGTGTTGTGCAATTTTGCAGCTGTGGCTCACAGGCCAGCACAGGCAGGGCTaGCAGCTGGTTCTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCVCVRACCAILQLWLTGQHRQG*QLVLWK Trigger: CTTCCAGAGAACCAGCTGGCAGCCCTGCCTGTGCTG...GCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACACACACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | CGTGTTGTGCAATTTTGCAGCTGTGGCTCACAGGCTGCCTGGAACTTGGGCTACCGTCCAGGAACTCAATaGCACTGGGCAGCACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVVQFCSCGSQAAWNLGYRPGTQ*HWAAQA Trigger: TGCCTGTGCTGCCCAGTGGCATTGAGTTCCTGGACG...GTAGCCCAAGTTCCAGGCAGCCTGTGAGCCACAGCTGCAAAATTGCACAACACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | GTGCGTGCGTGTTGTGCAATTTTGCAGCTGTGGCTCACAGGCTGCCTGGAACTTGGCAGGGCTGCCAGCTaGTTCTCTGGAAGGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VRACCAILQLWLTGCLELGRAAS*FSGRIR Trigger: TCTGATCCTTCCAGAGAACCAGCTGGCAGCCCTGCC...AAGTTCCAGGCAGCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | GTAAATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGGAAGGATCAGATCCTaGAGGGCAGGCAGCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VNSAPSVSLLAPSGKRRAGRIRS*RAGSRR Trigger: CCGCCTGCTGCCTGCCCTGCAGGATCTGATCCTTCC...TGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTGTTCTCTGAGTCAGGAGGAAGGATCAGATCCTaGAGGGCAGGCAGCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WRVWKRSLLWMLLFSESGGRIRS*RAGSRR Trigger: CCGCCTGCTGCCTGCCCTGCAGGATCTGATCCTTCC...TCCTGACTCAGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTGTGGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTGTTCTCTGAGGGAACTCAATGCCACTaGGCAGCACAGGCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVWRVWKRSLLWMLLFSEGTQCH*AAQAGL Trigger: CAGCCCTGCCTGTGCTGCCCAGTGGCATTGAGTTCC...CTCAGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCCACACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR CAA 72 bp | TGTCTCTGTGTGTGTGTGCGTGCGTGTTGTGCAATTTaGCAGCTGTGGCTCACAGGCTGCCTGGAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLCVCVRACCAI*QLWLTGCLELG Trigger: CCCAAGTTCCAGGCAGCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACACACACAGAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGTGTGTGTGCGTGCGTGTTGTGCAATTTTGCAGCTGTGGCTCACAGGCAAGCCAGGAACTTCATaGGGTTCTGAGGGAGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LCVCVRACCAILQLWLTGKPGTS*GSEGGV Trigger: TACCCCTCCCTCAGAACCTCATGAAGTTCCTGGCTT...GCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACACACACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | GCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTCTGGAGGAGATGGAGTTaGCAGAGAGGTCGATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AYQSERPGFSTLMILLPLWRRWS*QRGRSF Trigger: GAAGGATCGACCTCTCTGGCAACTCCATCTCCTCCA...GAGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | GGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTGTTCTCTGAGTCAGGAACAGCACAGGCAGGGCTaGCAGCTGGTTCTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GECGKDLCCGCCCSLSQEQHRQG*QLVLWK Trigger: CTTCCAGAGAACCAGCTGGCAGCCCTGCCTGTGCTG...TTCCTGACTCAGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | GTAAATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCACAGCACAGGCAGGGCTaGCAGCTGGTTCTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VNSAPSVSLLAPSGKRRAQHRQG*QLVLWK Trigger: CTTCCAGAGAACCAGCTGGCAGCCCTGCCTGTGCTG...TGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTCGGAGGGCATCGTTGTaGATGGAGGAGATGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPVRKTRLQHTDDSPPPRRASL*MEEMEL Trigger: CAACTCCATCTCCTCCATCCACAACGATGCCCTCCG...AGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | AATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGTGGGCAGGGCTGCCAGCTaGTTCTCTGGAAGGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSAPSVSLLAPSGKRRAVGRAAS*FSGRIR Trigger: TCTGATCCTTCCAGAGAACCAGCTGGCAGCCCTGCC...CACTGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | GTAAATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGGAACTCAATGCCACTaGGCAGCACAGGCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNSAPSVSLLAPSGKRRAGTQCH*AAQAGL Trigger: CAGCCCTGCCTGTGCTGCCCAGTGGCATTGAGTTCC...TGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTGTTCTCTGAGTCAGGAACTCAATGCCACTaGGCAGCACAGGCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VWRVWKRSLLWMLLFSESGTQCH*AAQAGL Trigger: CAGCCCTGCCTGTGCTGCCCAGTGGCATTGAGTTCC...TGACTCAGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| 3UTR CAA 72 bp | TCTCTCTCTCTGTCTCTGTGTGTGTGTGCGTGCGTGTaGTGCAATTTTGCAGCTGTGGCTCACAGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLCVCACV*CNFAAVAHRLP Trigger: AGGCAGCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACACACACAGAGACAGAGAGAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTGTGGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTGTTCTCTGAGAACTTCATGAGGTTCTaGGGGAGGGGTAGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WVWRVWKRSLLWMLLFSENFMRF*GRGRSG Trigger: CCCACTCCTACCCCTCCCTCAGAACCTCATGAAGTT...CTCAGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCCACACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR TCA 90 bp | AATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGTGAACTTCATGAGGTTCTaGGGGAGGGGTAGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSAPSVSLLAPSGKRRAVNFMRF*GRGRSG Trigger: CCCACTCCTACCCCTCCCTCAGAACCTCATGAAGTT...CACTGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | GTAAATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCACGTCCAGGAACTCAATaGCACTGGGCAGCACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VNSAPSVSLLAPSGKRRARPGTQ*HWAAQA Trigger: TGCCTGTGCTGCCCAGTGGCATTGAGTTCCTGGACG...TGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTGTTCTCTGAGTCACGTCCAGGAACTCAATaGCACTGGGCAGCACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VWRVWKRSLLWMLLFSESRPGTQ*HWAAQA Trigger: TGCCTGTGCTGCCCAGTGGCATTGAGTTCCTGGACG...TGACTCAGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | GCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTCTCGATCATGTTATTCTaGAGGTGCAGAGAGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AYQSERPGFSTLMILLPLSIMLF*RCRERR Trigger: CCTGCGCTCTCTGCACCTGCAGAATAACATGATCGA...GAGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | TACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTCCCTTGTGGATGGAGGAGATaGAGTTGCCAGAGAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YQSERPGFSTLMILLPLPCGWRR*SCQRGR Trigger: TCGACCTCTCTGGCAACTCCATCTCCTCCATCCACA...AGGGAGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | AATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGTGCGGAGGGCATCGTTGTaGATGGAGGAGATGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NSAPSVSLLAPSGKRRAVRRASL*MEEMEL Trigger: CAACTCCATCTCCTCCATCCACAACGATGCCCTCCG...CACTGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR TCA 90 bp | TACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTCCCTGTTTTGTCAGCCCTTTaGAGTCTCCAGCCTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: YQSERPGFSTLMILLPLPVLSAL*SLQPGC Trigger: ACATCCAGGCTGGAGACTTCAAAGGGCTGACAAAAC...AGGGAGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124051.9 |
||
| CDS-3UTR GCA 90 bp | AATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGTGGCTGTCTCTGCCTTCTaGAGCACCAAGCTCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSAPSVSLLAPSGKRRAVAVSAF*STKLNR Trigger: TCTGTTGAGCTTGGTGCTGCAGAAGGCAGAGACAGC...CACTGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | AATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGTGGAGAGAAGCTGTCTCTaGCTTCTGCAGCACCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSAPSVSLLAPSGKRRAVERSCL*LLQHQA Trigger: AGCTTGGTGCTGCAGAAGGCAGAGACAGCTTCTCTC...CACTGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | AATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGTGTGGAGGAGATGGAGTTaGCAGAGAGGTCGATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSAPSVSLLAPSGKRRAVWRRWS*QRGRSF Trigger: GAAGGATCGACCTCTCTGGCAACTCCATCTCCTCCA...CACTGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGCGTGCGTGTTGTGCAATTTTGCAGCTGTGGCTCACAGGCTGCCTGGAGATCCTTCTCAGTTTTaGATGACTGCTCTGGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCACVLCNFAAVAHRLPGDPSQF*MTALGV Trigger: AACTCCCAGAGCAGTCATGCAAAACTGAGAAGGATC...TCCAGGCAGCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGTGTGTGTGCGTGCGTGTTGTGCAATTTTGCAGCTGTGGCTCACAGGCCCTTTTAGATGCTTTTaGTTCCGTCTGGCTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCVCVRACCAILQLWLTGPFRCF*FRLAQQ Trigger: CTGCTGAGCCAGACGGAACCAAAAGCATCTAAAAGG...GCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACACACACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | TACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTCCCTGAGCATATAGGTAGGTaGTCATCTGGGGAAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YQSERPGFSTLMILLPLPEHIGR*SSGEEE Trigger: CTCCTCTTCCCCAGATGACCACCTACCTATATGCTC...AGGGAGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124051.9 |
||
| CDS-3UTR TCA 90 bp | GTAAATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAAAGCCAGGAACTTCATaGGGTTCTGAGGGAGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VNSAPSVSLLAPSGKRRAKPGTS*GSEGGV Trigger: TACCCCTCCCTCAGAACCTCATGAAGTTCCTGGCTT...TGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | ATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATGCTGTCTCTGCCTTCTaGAGCACCAAGCTCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISPVSLPVRKTRLQHTDDAVSAF*STKLNR Trigger: TCTGTTGAGCTTGGTGCTGCAGAAGGCAGAGACAGC...ATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCTGACAGGACTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTGTTCTCTGAGTCATGGAGGAGATGGAGTTaGCAGAGAGGTCGATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VWRVWKRSLLWMLLFSESWRRWS*QRGRSF Trigger: GAAGGATCGACCTCTCTGGCAACTCCATCTCCTCCA...TGACTCAGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | AATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGTGTCGATCATGTTATTCTaGAGGTGCAGAGAGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSAPSVSLLAPSGKRRAVSIMLF*RCRERR Trigger: CCTGCGCTCTCTGCACCTGCAGAATAACATGATCGA...CACTGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTGTTCTCTGAGTCAGGAATGTGGATGGAGGAGATaGAGTTGCCAGAGAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GECGKDLCCGCCCSLSQECGWRR*SCQRGR Trigger: TCGACCTCTCTGGCAACTCCATCTCCTCCATCCACA...TTCCTGACTCAGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | GTAAATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCATGTGGATGGAGGAGATaGAGTTGCCAGAGAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VNSAPSVSLLAPSGKRRACGWRR*SCQRGR Trigger: TCGACCTCTCTGGCAACTCCATCTCCTCCATCCACA...TGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | ATTATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATCGGAGGGCATCGTTGTaGATGGAGGAGATGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IISPVSLPVRKTRLQHTDRRASL*MEEMEL Trigger: CAACTCCATCTCCTCCATCCACAACGATGCCCTCCG...ATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCTGACAGGACTGATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGTGTGTGTGCGTGCGTGTTGTGCAATTTTGCAGCTGTGGCTCACAGGCGCAAAAATAGGCCTCTaGGAAAAGGCTCAGGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCVCVRACCAILQLWLTGAKIGL*EKAQVD Trigger: ATCAACCTGAGCCTTTTCCCAGAGGCCTATTTTTGC...GCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACACACACAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR TCA 90 bp | ATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATCATCGTGAGGTTTGGTaGCAATGTCTTCTGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISPVSLPVRKTRLQHTDDHREVW*QCLLSH Trigger: GTGGCTCAGAAGACATTGTCACCAAACCTCACGATG...ATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCTGACAGGACTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR TCA 90 bp | GTAAATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCACATCGTGAGGTTTGGTaGCAATGTCTTCTGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VNSAPSVSLLAPSGKRRAHREVW*QCLLSH Trigger: GTGGCTCAGAAGACATTGTCACCAAACCTCACGATG...TGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | ATTATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGCTGTCTCTGCCTTCTaGAGCACCAAGCTCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: IISPVSLPVRKTRLQHTDAVSAF*STKLNR Trigger: TCTGTTGAGCTTGGTGCTGCAGAAGGCAGAGACAGC...ATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCTGACAGGACTGATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR TCA 90 bp | ATTATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATCATCGTGAGGTTTGGTaGCAATGTCTTCTGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IISPVSLPVRKTRLQHTDHREVW*QCLLSH Trigger: GTGGCTCAGAAGACATTGTCACCAAACCTCACGATG...ATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCTGACAGGACTGATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR TCA 90 bp | AATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGTGCTTCTCAGTTTTGCATaGCTGCTCTGGGAGTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSAPSVSLLAPSGKRRAVLLSFA*LLWEFS Trigger: ACTAAACTCCCAGAGCAGTCATGCAAAACTGAGAAG...CACTGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTGTGGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTGTTCTCTGAGCTTCTCAGTTTTGCATaGCTGCTCTGGGAGTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: WVWRVWKRSLLWMLLFSELLSFA*LLWEFS Trigger: ACTAAACTCCCAGAGCAGTCATGCAAAACTGAGAAG...CTCAGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCCACACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | AAAATTCTGGAAAATGTAATTATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCGGAAGGATCAGATCCTaGAGGGCAGGCAGCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KILENVIISPVSLPVRKTGRIRS*RAGSRR Trigger: CCGCCTGCTGCCTGCCCTGCAGGATCTGATCCTTCC...GGTCTTTCTGACTGGTAGGCTGACAGGACTGATAATTACATTTTCCAGAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | AATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGTGGATCCTTCTCAGTTTTaGATGACTGCTCTGGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NSAPSVSLLAPSGKRRAVDPSQF*MTALGV Trigger: AACTCCCAGAGCAGTCATGCAAAACTGAGAAGGATC...CACTGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | GTAAATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCACCTTTTAGATGCTTTTaGTTCCGTCTGGCTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VNSAPSVSLLAPSGKRRAPFRCF*FRLAQQ Trigger: CTGCTGAGCCAGACGGAACCAAAAGCATCTAAAAGG...TGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | GTGCGTGCGTGTTGTGCAATTTTGCAGCTGTGGCTCACAGGCTGCCTGGAACTTGGGACTAGTTCTTGTTaGAAGAGTCAGATTGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VRACCAILQLWLTGCLELGTSSC*KSQIAY Trigger: ATAAGCAATCTGACTCTTCCAACAAGAACTAGTCCC...AAGTTCCAGGCAGCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | AATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGTGGCAAAAATAGGCCTCTaGGAAAAGGCTCAGGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSAPSVSLLAPSGKRRAVAKIGL*EKAQVD Trigger: ATCAACCTGAGCCTTTTCCCAGAGGCCTATTTTTGC...CACTGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | ATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATGATGTTCTCCAGGTCTaGATCATCACAGTAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISPVSLPVRKTRLQHTDDDVLQV*IITVDR Trigger: TCTGTCTACTGTGATGATGCAGACCTGGAGAACATC...ATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCTGACAGGACTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124051.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGGAGAGTGTGGAAAAGATCTCTGCTGTGGATGCTGCTGTTCTCTGAGTCAAATCCAGCATGTTGTTaGCCAGGTAGAGAAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VWRVWKRSLLWMLLFSESNPACC*PGRETA Trigger: TGCAGTTTCTCTACCTGGCCAACAACATGCTGGATT...TGACTCAGAGAACAGCAGCATCCACAGCAGAGATCTTTTCCACACTCTCCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | GTAAATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAAATCCAGCATGTTGTTaGCCAGGTAGAGAAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VNSAPSVSLLAPSGKRRANPACC*PGRETA Trigger: TGCAGTTTCTCTACCTGGCCAACAACATGCTGGATT...TGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | ATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATAATCCAGCATGTTGTTaGCCAGGTAGAGAAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISPVSLPVRKTRLQHTDDNPACC*PGRETA Trigger: TGCAGTTTCTCTACCTGGCCAACAACATGCTGGATT...ATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCTGACAGGACTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | ATTCTGGAAAATGTAATTATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCAGGGAGAGAAGCTGTCTCTaGCTTCTGCAGCACCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILENVIISPVSLPVRKTRERSCL*LLQHQA Trigger: AGCTTGGTGCTGCAGAAGGCAGAGACAGCTTCTCTC...CCTGGTCTTTCTGACTGGTAGGCTGACAGGACTGATAATTACATTTTCCAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | AATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGTGGGGACTAGTTCTTGTTaGAAGAGTCAGATTGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: NSAPSVSLLAPSGKRRAVGTSSC*KSQIAY Trigger: ATAAGCAATCTGACTCTTCCAACAAGAACTAGTCCC...CACTGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR TCA 90 bp | AAAATTCTGGAAAATGTAATTATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCAACTTCATGAGGTTCTaGGGGAGGGGTAGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KILENVIISPVSLPVRKTNFMRF*GRGRSG Trigger: CCCACTCCTACCCCTCCCTCAGAACCTCATGAAGTT...GGTCTTTCTGACTGGTAGGCTGACAGGACTGATAATTACATTTTCCAGAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR GCA 90 bp | ATTCTGGAAAATGTAATTATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCAGGTCGATCATGTTATTCTaGAGGTGCAGAGAGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILENVIISPVSLPVRKTRSIMLF*RCRERR Trigger: CCTGCGCTCTCTGCACCTGCAGAATAACATGATCGA...CCTGGTCTTTCTGACTGGTAGGCTGACAGGACTGATAATTACATTTTCCAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTGCTGTGGATGCTGCTGTTCTCTGAGTCAGGAACCATAAGGTGTAGGGAAGGGACTAGTTCTTGTTaGAAGAGTCAGATTGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLLWMLLFSESGTIRCREGTSSC*KSQIAY Trigger: ATAAGCAATCTGACTCTTCCAACAAGAACTAGTCCC...TTCCCTACACCTTATGGTTCCTGACTCAGAGAACAGCAGCATCCACAGCAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CCA 90 bp | ATTCTGGAAAATGTAATTATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCAGGTTGAAGTCTCCAGCCTaGATGTGGCTGATGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILENVIISPVSLPVRKTRLKSPA*MWLMWL Trigger: CAACCACATCAGCCACATCCAGGCTGGAGACTTCAA...CCTGGTCTTTCTGACTGGTAGGCTGACAGGACTGATAATTACATTTTCCAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124051.9 |
||
| CDS-3UTR CCA 90 bp | AAAATTCTGGAAAATGTAATTATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCGCAAAAATAGGCCTCTaGGAAAAGGCTCAGGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KILENVIISPVSLPVRKTAKIGL*EKAQVD Trigger: ATCAACCTGAGCCTTTTCCCAGAGGCCTATTTTTGC...GGTCTTTCTGACTGGTAGGCTGACAGGACTGATAATTACATTTTCCAGAATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS GCA 90 bp | AGGCTCAGGTTGATGGGGTTCCCGTCCAGGCGGATGTCTTCCAGCTaGCGGCGCTCATGTCTGTGTTCCCCGGTGTCACAGAAGGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RLRLMGFPSRRMSSS*RRSCLCSPVSQKVS Trigger: CGACACCTTCTGTGACACCGGGGAACACAGACATGAGCGCCGGCAGCTGGAAGACATCCGCCTGGACGGGAACCCCATCAACCTGAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS CCA 90 bp | AGCTCTGCAGCCGATTCAGGCGGACGTCCAGGAACTCAATGCCACTaGGCAGCACAGGCAGGGCTGCCAGCTGGTTCTCTGGAAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSAADSGGRPGTQCH*AAQAGLPAGSLEGS Trigger: TGATCCTTCCAGAGAACCAGCTGGCAGCCCTGCCTGTGCTGCCCAGTGGCATTGAGTTCCTGGACGTCCGCCTGAATCGGCTGCAGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS GCA 90 bp | AGCTTCTTCAGCGCCACGAATGCCTCAGGCTGTATCCCAGAGCTCTaGAGCCGATTCAGGCGGACGTCCAGGAACTCAATGCCACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFFSATNASGCIPEL*SRFRRTSRNSMPLG Trigger: GCCCAGTGGCATTGAGTTCCTGGACGTCCGCCTGAATCGGCTGCAGAGCTCTGGGATACAGCCTGAGGCATTCGTGGCGCTGAAGAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS TCA 90 bp | ACAGAAGAGCCAAGGCACACACAGACCAGGCAGGTAGGCAGGCCATaGCTGCTCTGGGAGTTTAGTAGGCCAGTGGTGGTAGGTACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TEEPRHTQTRQVGRP*LLWEFSRPVVVGTA Trigger: GGCCGTACCTACCACCACTGGCCTACTAAACTCCCAGAGCAGTCATGGCCTGCCTACCTGCCTGGTCTGTGTGTGCCTTGGCTCTTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 |
||
| CDS CCA 90 bp | AGGATCAGATCCTGCAGGGCAGGCAGCAGGCGGAGGGCATCGTTGTaGATGGAGGAGATGGAGTTGCCAGAGAGGTCGATCCTTCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RIRSCRAGSRRRASL*MEEMELPERSILLS Trigger: ACTGAGAAGGATCGACCTCTCTGGCAACTCCATCTCCTCCATCCACAACGATGCCCTCCGCCTGCTGCCTGCCCTGCAGGATCTGATCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS CCA 90 bp | TCAGATCCTGCAGGGCAGGCAGCAGGCGGAGGGCATCGTTGTGGATaGAGGAGATGGAGTTGCCAGAGAGGTCGATCCTTCTCAGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SDPAGQAAGGGHRCG*RRWSCQRGRSFSVL Trigger: CAAAACTGAGAAGGATCGACCTCTCTGGCAACTCCATCTCCTCCATCCACAACGATGCCCTCCGCCTGCTGCCTGCCCTGCAGGATCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS GCA 90 bp | CAGAAGGTGTCGCTTTCCATGGTCTCGATCATGTTATTCTGCAGGTaGAGAGAGCGCAGGCTGAGGGGCAAAGGCCCAGGGATGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: QKVSLSMVSIMLFCR*RERRLRGKGPGMES Trigger: GGATTCCATCCCTGGGCCTTTGCCCCTCAGCCTGCGCTCTCTGCACCTGCAGAATAACATGATCGAGACCATGGAAAGCGACACCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS GCA 90 bp | GTGTCACAGAAGGTGTCGCTTTCCATGGTCTCGATCATGTTATTCTaGAGGTGCAGAGAGCGCAGGCTGAGGGGCAAAGGCCCAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VSQKVSLSMVSIMLF*RCRERRLRGKGPGM Trigger: CATCCCTGGGCCTTTGCCCCTCAGCCTGCGCTCTCTGCACCTGCAGAATAACATGATCGAGACCATGGAAAGCGACACCTTCTGTGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR CAA 90 bp | AATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGTGGGGAAAAGGCTCAGGTaGATGGGGTTCCCGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSAPSVSLLAPSGKRRAVGKRLR*MGFPSR Trigger: CCTGGACGGGAACCCCATCAACCTGAGCCTTTTCCC...CACTGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS TCA 90 bp | GAGGAGATGGAGTTGCCAGAGAGGTCGATCCTTCTCAGTTTTGCATaGCTGCTCTGGGAGTTTAGTAGGCCAGTGGTGGTAGGTACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EEMELPERSILLSFA*LLWEFSRPVVVGTA Trigger: GGCCGTACCTACCACCACTGGCCTACTAAACTCCCAGAGCAGTCATGCAAAACTGAGAAGGATCGACCTCTCTGGCAACTCCATCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR CAA 90 bp | GTAAATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAAGGCGGAGGGCATCGTaGTGGATGGAGGAGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VNSAPSVSLLAPSGKRRARRRAS*WMEEME Trigger: CTCCATCTCCTCCATCCACAACGATGCCCTCCGCCT...TGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR CAA 90 bp | ATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATAGGCGGAGGGCATCGTaGTGGATGGAGGAGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ISPVSLPVRKTRLQHTDDRRRAS*WMEEME Trigger: CTCCATCTCCTCCATCCACAACGATGCCCTCCGCCT...ATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGCTGACAGGACTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CAA 90 bp | GTAAATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGGGAAAAGGCTCAGGTaGATGGGGTTCCCGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VNSAPSVSLLAPSGKRRAGKRLR*MGFPSR Trigger: CCTGGACGGGAACCCCATCAACCTGAGCCTTTTCCC...TGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS TCA 90 bp | GTGGTGGTAGGTACGGCCATCGTGAGGTTTGGTGACAATGTCTTCTaGGCCACAGTGCTAGTGGGACTAGTTCTTGTTGGAAGAGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VVVGTAIVRFGDNVF*ATVLVGLVLVGRVR Trigger: TCTGACTCTTCCAACAAGAACTAGTCCCACTAGCACTGTGGCTCAGAAGACATTGTCACCAAACCTCACGATGGCCGTACCTACCACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR CAA 90 bp | GCCTACCAGTCAGAAAGACCAGGCTTCAGCACACTGATGATTCTCCTCCCCCTCGTTGGAAGAGTCAGATaGCTTATTTTAGCCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AYQSERPGFSTLMILLPLVGRVR*LILASG Trigger: CCCTGAGGCTAAAATAAGCAATCTGACTCTTCCAAC...GAGGGGGAGGAGAATCATCAGTGTGCTGAAGCCTGGTCTTTCTGACTGGTAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CAA 90 bp | CTCTGTGTGTGTGTGCGTGCGTGTTGTGCAATTTTGCAGCTGTGGCTCACAGGCGTTGGAAGAGTCAGATaGCTTATTTTAGCCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LCVCVRACCAILQLWLTGVGRVR*LILASG Trigger: CCCTGAGGCTAAAATAAGCAATCTGACTCTTCCAAC...GCCTGTGAGCCACAGCTGCAAAATTGCACAACACGCACGCACACACACACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTGCTGTGGATGCTGCTGTTCTCTGAGTCAGGAACCATAAGGTGTAGGGAAATGGAGGAGATGGAGTaGCCAGAGAGGTCGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLLWMLLFSESGTIRCREMEEME*PERSIL Trigger: AAGGATCGACCTCTCTGGCAACTCCATCTCCTCCAT...TTCCCTACACCTTATGGTTCCTGACTCAGAGAACAGCAGCATCCACAGCAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS-3UTR CAA 90 bp | GTAAATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAATGGAGGAGATGGAGTaGCCAGAGAGGTCGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VNSAPSVSLLAPSGKRRAMEEME*PERSIL Trigger: AAGGATCGACCTCTCTGGCAACTCCATCTCCTCCAT...TGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR CAA 90 bp | GTAAATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCACGATCCTTCTCAGTTTaGCATGACTGCTCTGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VNSAPSVSLLAPSGKRRARSFSV*HDCSGS Trigger: ACTCCCAGAGCAGTCATGCAAAACTGAGAAGGATCG...TGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTGCTGTGGATGCTGCTGTTCTCTGAGTCAGGAACCATAAGGTGTAGGGAACGATCCTTCTCAGTTTaGCATGACTGCTCTGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLLWMLLFSESGTIRCRERSFSV*HDCSGS Trigger: ACTCCCAGAGCAGTCATGCAAAACTGAGAAGGATCG...TTCCCTACACCTTATGGTTCCTGACTCAGAGAACAGCAGCATCCACAGCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153617.9 |
||
| CDS-3UTR CAA 90 bp | AATAGTGCTCCCTCAGTGAGCCTCTTAGCACCATCTGGGAAGAGAAGAGCAGTGGTTGGAAGAGTCAGATaGCTTATTTTAGCCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NSAPSVSLLAPSGKRRAVVGRVR*LILASG Trigger: CCCTGAGGCTAAAATAAGCAATCTGACTCTTCCAAC...CACTGCTCTTCTCTTCCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS-3UTR CAA 90 bp | AAAATTCTGGAAAATGTAATTATCAGTCCTGTCAGCCTACCAGTCAGAAAGACCGGGAAAAGGCTCAGGTaGATGGGGTTCCCGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KILENVIISPVSLPVRKTGKRLR*MGFPSR Trigger: CCTGGACGGGAACCCCATCAACCTGAGCCTTTTCCC...GGTCTTTCTGACTGGTAGGCTGACAGGACTGATAATTACATTTTCCAGAATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000153617.9 |
||
| CDS GCA 90 bp | AGTCAGATTGCTTATTTTAGCCTCAGGGATCTGGTCTCCATAGTCTaGCAGTTCTTCATAGTTGCTGAGATCAATGACCTCGTTGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SQIAYFSLRDLVSIV*QFFIVAEINDLVVV Trigger: GACTACAACGAGGTCATTGATCTCAGCAACTATGAAGAACTGGCAGACTATGGAGACCAGATCCCTGAGGCTAAAATAAGCAATCTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS CCA 72 bp | GCCGATTCAGGCGGACGTCCAGGAACTCAATGCCACTaGGCAGCACAGGCAGGGCTGCCAGCTGGTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: ADSGGRPGTQCH*AAQAGLPAGSL Trigger: CAGAGAACCAGCTGGCAGCCCTGCCTGTGCTGCCCAGTGGCATTGAGTTCCTGGACGTCCGCCTGAATCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS GCA 72 bp | TTGATGGGGTTCCCGTCCAGGCGGATGTCTTCCAGCTaGCGGCGCTCATGTCTGTGTTCCCCGGTGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: LMGFPSRRMSSS*RRSCLCSPVSQ Trigger: CTGTGACACCGGGGAACACAGACATGAGCGCCGGCAGCTGGAAGACATCCGCCTGGACGGGAACCCCATCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS CCA 72 bp | GCAGGGCAGGCAGCAGGCGGAGGGCATCGTTGTGGATaGAGGAGATGGAGTTGCCAGAGAGGTCGATCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AGQAAGGGHRCG*RRWSCQRGRSF Trigger: GAAGGATCGACCTCTCTGGCAACTCCATCTCCTCCATCCACAACGATGCCCTCCGCCTGCTGCCTGCCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS CAA 90 bp | GGAAGGATCAGATCCTGCAGGGCAGGCAGCAGGCGGAGGGCATCGTaGTGGATGGAGGAGATGGAGTTGCCAGAGAGGTCGATCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GRIRSCRAGSRRRAS*WMEEMELPERSILL Trigger: GAGAAGGATCGACCTCTCTGGCAACTCCATCTCCTCCATCCACAACGATGCCCTCCGCCTGCTGCCTGCCCTGCAGGATCTGATCCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS GCA 72 bp | AGCAGCTTCCAGGGAGCTTCTGGTGGAGATGATGACTaGCTGTCAGAGCAGGGGACAGCTAGACACCCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSFQGASGGDDD*LSEQGTARHPL Trigger: GAGGGGGTGTCTAGCTGTCCCCTGCTCTGACAGGCAGTCATCATCTCCACCAGAAGCTCCCTGGAAGCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS GCA 72 bp | AGCGCCACGAATGCCTCAGGCTGTATCCCAGAGCTCTaGAGCCGATTCAGGCGGACGTCCAGGAACTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SATNASGCIPEL*SRFRRTSRNSM Trigger: CATTGAGTTCCTGGACGTCCGCCTGAATCGGCTGCAGAGCTCTGGGATACAGCCTGAGGCATTCGTGGCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS GCA 72 bp | CTCACCACGAATGCCTCAGGCTGTATCCCAGAGCTCTaGAGCCGATTCAGGCGGACGTCCAGGAACTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: LTTNASGCIPEL*SRFRRTSRNSM Trigger: CATTGAGTTCCTGGACGTCCGCCTGAATCGGCTGCAGAGCTCTGGGATACAGCCTGAGGCATTCGTGGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126123.2 |
||
| CDS GCA 72 bp | GGCGGAGGGCATCGTTGTGGATGGAGGAGATGGAGTTaGCAGAGAGGTCGATCCTTCTCAGTTTTGTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GGGHRCGWRRWS*QRGRSFSVLSA Trigger: GGCTGACAAAACTGAGAAGGATCGACCTCTCTGGCAACTCCATCTCCTCCATCCACAACGATGCCCTCCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 |
||
| CDS CCA 72 bp | GCAGCAGGCGGAGGGCATCGTTGTGGATGGAGGAGATaGAGTTGCCAGAGAGGTCGATCCTTCTCAGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: AAGGGHRCGWRR*SCQRGRSFSVL Trigger: CAAAACTGAGAAGGATCGACCTCTCTGGCAACTCCATCTCCTCCATCCACAACGATGCCCTCCGCCTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS GCA 72 bp | GGCGGAGGGCATCGTTGTGGATGGAGGAGATGGAGTTaGCAGAGAGGTCGATCCTTCTCAGTTTTGCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: GGGHRCGWRRWS*QRGRSFSVLHD Trigger: GTCATGCAAAACTGAGAAGGATCGACCTCTCTGGCAACTCCATCTCCTCCATCCACAACGATGCCCTCCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS CAA 72 bp | AGGCGGAGGGCATCGTTGTGGATGGAGGAGATGGAGTaGCCAGAGAGGTCGATCCTTCTCAGTTTTGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRRASLWMEEME*PERSILLSFVS Trigger: GCTGACAAAACTGAGAAGGATCGACCTCTCTGGCAACTCCATCTCCTCCATCCACAACGATGCCCTCCGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 |
||
| CDS GCA 72 bp | GGTCATCTGGGGAAGAGGAGGGATGTTCTCCAGGTCTaGATCATCACAGTAGACAGAAGAGCCAAGGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: GHLGKRRDVLQV*IITVDRRAKAH Trigger: GTGTGCCTTGGCTCTTCTGTCTACTGTGATGATGCAGACCTGGAGAACATCCCTCCTCTTCCCCAGATGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 |
||
| CDS CCA 72 bp | TGTGTTCCCCGGTGTCACAGAAGGTGTCGCTTTCCATaGTCTCGATCATGTTATTCTGCAGGTGCAGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CVPRCHRRCRFP*SRSCYSAGAES Trigger: GCTCTCTGCACCTGCAGAATAACATGATCGAGACCATGGAAAGCGACACCTTCTGTGACACCGGGGAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124051.9 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS CAA 90 bp | ATGGAGTTGCCAGAGAGGTCGATCCTTCTCAGTTTTGTCAGCCCTTaGAAGTCTCCAGCCTGGATGTGGCTGATGTGGTTGAAGCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: MELPERSILLSFVSP*KSPAWMWLMWLKRA Trigger: TGCTCGCTTCAACCACATCAGCCACATCCAGGCTGGAGACTTCAAAGGGCTGACAAAACTGAGAAGGATCGACCTCTCTGGCAACTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 |
||
| CDS TCA 72 bp | GAGTTGCCAGAGAGGTCGATCCTTCTCAGTTTTGCATaGCTGCTCTGGGAGTTTAGTAGGCCAGTGGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ELPERSILLSFA*LLWEFSRPVVV Trigger: TACCACCACTGGCCTACTAAACTCCCAGAGCAGTCATGCAAAACTGAGAAGGATCGACCTCTCTGGCAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS CCA 72 bp | CTGAGGTACATCCTTTTAGATGCTTTTGGTTCCGTCTaGCTCAGCAGCTTCCAGGGAGCTTCTGGTGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LRYILLDAFGSV*LSSFQGASGGD Trigger: ATCTCCACCAGAAGCTCCCTGGAAGCTGCTGAGCCAGACGGAACCAAAAGCATCTAAAAGGATGTACCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS CCA 72 bp | CTGAATCCCTCTGAGGTACATCCTTTTAGATGCTTTTaGTTCCGTCTGGCTCAGCAGCTTCCAGGGAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LNPSEVHPFRCF*FRLAQQLPGSF Trigger: GAAGCTCCCTGGAAGCTGCTGAGCCAGACGGAACCAAAAGCATCTAAAAGGATGTACCTCAGAGGGATTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 ENSMUST00000149380.8 ENSMUST00000153617.9 |
||
| CDS CCA 72 bp | CTTCTCAGTTTTGTCAGCCCTTTGAAGTCTCCAGCCTaGATGTGGCTGATGTGGTTGAAGCGAGCATATAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLSFVSPLKSPA*MWLMWLKRAYR Trigger: CCTATATGCTCGCTTCAACCACATCAGCCACATCCAGGCTGGAGACTTCAAAGGGCTGACAAAACTGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124051.9 ENSMUST00000126123.2 |
||