Pregenerated sensors for OPRK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025905Ensembl transcript IDs: ENSMUST00000027038.11, ENSMUST00000160339.2, ENSMUST00000160777.8, ENSMUST00000239100.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAGAGTGTGTCATATCTTTATGCAGGCCCTCTGTCTCCAGAAAGTaGAGGAGCGACACCTGTGAGACAGCTGGTGATGAGAGCTTACAG | + |
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Preference number: 1 (lower is better) Translates to: VECVISLCRPSVSRK*RSDTCETAGDESLQ Trigger: CTGTAAGCTCTCATCACCAGCTGTCTCACAGGTGTCGCTCCTTCACTTTCTGGAGACAGAGGGCCTGCATAAAGATATGACACACTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR CCA 90 bp | GAAGGAGCGACACCTGTGAGACAGCTGGTGATGAGAGCTTACAGATaGAACTGTGCCTACAGTATCGAGGTTCACACATCTGATGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: EGATPVRQLVMRAYR*NCAYSIEVHTSDAL Trigger: AAGAGCATCAGATGTGTGAACCTCGATACTGTAGGCACAGTTCCATCTGTAAGCTCTCATCACCAGCTGTCTCACAGGTGTCGCTCCTTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR GCA 90 bp | GGACAAGCTTCTGGGAACCTCAAGCATGGGGAGCCACTTGAGGGTTaGAGAATTAGACAAAAGCACTGGTTGCATTGCGCAAACATAGTA | + |
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Preference number: 1 (lower is better) Translates to: GQASGNLKHGEPLEG*RIRQKHWLHCANIV Trigger: TACTATGTTTGCGCAATGCAACCAGTGCTTTTGTCTAATTCTGCAACCCTCAAGTGGCTCCCCATGCTTGAGGTTCCCAGAAGCTTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR GCA 90 bp | GGCTTCTTTTCTGTCCTAGGAAAGAGGTGTATTGTTGCCAGGATCTaGTGTGCTCTGTTCTTCAGACTTGCTGCTCCTACTCAGCTAGAT | + |
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Preference number: 1 (lower is better) Translates to: GFFSVLGKRCIVARI*CALFFRLAAPTQLD Trigger: ATCTAGCTGAGTAGGAGCAGCAAGTCTGAAGAACAGAGCACAGCAGATCCTGGCAACAATACACCTCTTTCCTAGGACAGAAAAGAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR GCA 90 bp | CTTTTCTGTCCTAGGAAAGAGGTGTATTGTTGCCAGGATCTGCTGTaGTCTGTTCTTCAGACTTGCTGCTCCTACTCAGCTAGATCACTA | + |
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Preference number: 1 (lower is better) Translates to: LFCPRKEVYCCQDLL*SVLQTCCSYSARSL Trigger: TAGTGATCTAGCTGAGTAGGAGCAGCAAGTCTGAAGAACAGAGCACAGCAGATCCTGGCAACAATACACCTCTTTCCTAGGACAGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR TCA 90 bp | GTGCCCTGCACCTTAATATTTCAGAGTATGACATGTCTAAGTTACTaGATACCTCACCTTTCCACTTCAGACTGCAGTTGTAATCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: VPCTLIFQSMTCLSY*IPHLSTSDCSCNLG Trigger: ACCCAGATTACAACTGCAGTCTGAAGTGGAAAGGTGAGGTATTCAGTAACTTAGACATGTCATACTCTGAAATATTAAGGTGCAGGGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 |
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| 3UTR CCA 90 bp | AAAGAAAGAGTGTTGTCTTTGTTTCTCAAGGGATTGAAATCGGCTTaGCTTCTTTTCTGTCCTAGGAAAGAGGTGTATTGTTGCCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: KERVLSLFLKGLKSA*LLFCPRKEVYCCQD Trigger: ATCCTGGCAACAATACACCTCTTTCCTAGGACAGAAAAGAAGCCAAGCCGATTTCAATCCCTTGAGAAACAAAGACAACACTCTTTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR TCA 90 bp | CAAGGAAACCAAAAGAAAGAGTGTTGTCTTTGTTTCTCAAGGGATTaGAATCGGCTTGGCTTCTTTTCTGTCCTAGGAAAGAGGTGTATT | + |
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Preference number: 1 (lower is better) Translates to: QGNQKKECCLCFSRD*NRLGFFSVLGKRCI Trigger: AATACACCTCTTTCCTAGGACAGAAAAGAAGCCAAGCCGATTTCAATCCCTTGAGAAACAAAGACAACACTCTTTCTTTTGGTTTCCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR GCA 90 bp | CAGTGGAAATCATACCAAGACCAAATTCCAGAGAGTAGATTATATTaGAACAACATATCTAATCCTCAATTCTCCATGCCTTGGGGGCTA | + |
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Preference number: 1 (lower is better) Translates to: QWKSYQDQIPESRLY*NNISNPQFSMPWGL Trigger: TAGCCCCCAAGGCATGGAGAATTGAGGATTAGATATGTTGTTGCAATATAATCTACTCTCTGGAATTTGGTCTTGGTATGATTTCCACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCCTCCATGTCACTCTCCCTCCCTGGGAGACACTCACTCTCTTTCCATGGGAAAGAGAGCTGTATTCTaGGCTGGTAAGATTGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PPPCHSPSLGDTHSLSMGKRAVF*AGKIAQ Trigger: CTGAGCAATCTTACCAGCTCAGAATACAGCTCTCTT...TCCCATGGAAAGAGAGTGAGTGTCTCCCAGGGAGGGAGAGTGACATGGAGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGGAACCTCAAGCATGGGGAGCCACTTGAGGGTTGCAGAATTAGACAAAAGCTCTGTTCTTCAGACTTaGTGCTCCTACTCAGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: LGTSSMGSHLRVAELDKSSVLQT*CSYSAR Trigger: TCTAGCTGAGTAGGAGCAGCAAGTCTGAAGAACAGA...GCTTTTGTCTAATTCTGCAACCCTCAAGTGGCTCCCCATGCTTGAGGTTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTCATATCTTTATGCAGGCCCTCTGTCTCCAGAAAGTGAAGGAGCGACACCTATGAGAGCTTACAGATaGAACTGTGCCTACAGTATC | + |
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Preference number: 2 (lower is better) Translates to: VSYLYAGPLSPESEGATPMRAYR*NCAYSI Trigger: GATACTGTAGGCACAGTTCCATCTGTAAGCTCTCAT...AGGTGTCGCTCCTTCACTTTCTGGAGACAGAGGGCCTGCATAAAGATATGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGTATCAACAGGCAGGTTGGGTGTCCAGTAAGTTTTGCATCCAATGGATTTCTGTTCTTCAGACTTaGTGCTCCTACTCAGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: CQYQQAGWVSSKFCIQWISVLQT*CSYSAR Trigger: TCTAGCTGAGTAGGAGCAGCAAGTCTGAAGAACAGA...AATCCATTGGATGCAAAACTTACTGGACACCCAACCTGCCTGTTGATACTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGGATCTGCTGTGCTCTGTTCTTCAGACTTGCTGCTCCTACTCAGCTAGAACTGCAGTTGTAATCTaGGTTAAACCAAGATCATTG | + |
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Preference number: 2 (lower is better) Translates to: CQDLLCSVLQTCCSYSARTAVVI*VKPRSL Trigger: CAATGATCTTGGTTTAACCCAGATTACAACTGCAGT...TCTAGCTGAGTAGGAGCAGCAAGTCTGAAGAACAGAGCACAGCAGATCCTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGGAGACACTCACTCTCTTTCCATGGGATTCCAACTTAGTTATCAAGAAATGGGTAAGATTGCTCAGTaGGTAAAGGCACATGCCACA | + |
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Preference number: 2 (lower is better) Translates to: LGDTHSLSMGFQLSYQEMGKIAQ*VKAHAT Trigger: TGTGGCATGTGCCTTTACTCACTGAGCAATCTTACC...CATTTCTTGATAACTAAGTTGGAATCCCATGGAAAGAGAGTGAGTGTCTCCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTCATATCTTTATGCAGGCCCTCTGTCTCCAGAAAGTGAAGGAGCGACACCTATCACTAATGTGCCCTaGACCTTAATATTTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: VSYLYAGPLSPESEGATPITNVP*TLIFQS Trigger: ACTCTGAAATATTAAGGTGCAGGGCACATTAGTGAT...AGGTGTCGCTCCTTCACTTTCTGGAGACAGAGGGCCTGCATAAAGATATGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGGAACCTCAAGCATGGGGAGCCACTTGAGGGTTGCAGAATTAGACAAAAGCAAATTACACACACTTTaGTGGTATTTAAGCCTCACA | + |
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Preference number: 2 (lower is better) Translates to: LGTSSMGSHLRVAELDKSKLHTL*WYLSLT Trigger: TGTGAGGCTTAAATACCAGCAAAGTGTGTGTAATTT...GCTTTTGTCTAATTCTGCAACCCTCAAGTGGCTCCCCATGCTTGAGGTTCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAAATTGTGCTCAGCCATCTCAAGCCCCATTTGCTTTTTCAGCACACATTTTATCCTCAATTCTCCATaGCTTGGGGGCTATGTCTAC | + |
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Preference number: 2 (lower is better) Translates to: CKLCSAISSPICFFSTHFILNSP*LGGYVY Trigger: GTAGACATAGCCCCCAAGGCATGGAGAATTGAGGAT...AAAATGTGTGCTGAAAAAGCAAATGGGGCTTGAGATGGCTGAGCACAATTTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCACATGCCACATGAGAGTGCAAGACTGGCAATGTGAGTACCATCCCCAGCTGGACAAGAAAACCTaGTACTTATTTACATACAGA | + |
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Preference number: 2 (lower is better) Translates to: KGTCHMRVQDWQCEYHPQLDKKT*YLFTYR Trigger: TCTGTATGTAAATAAGTACCAGGTTTTCTTGTCCAG...CTGGGGATGGTACTCACATTGCCAGTCTTGCACTCTCATGTGGCATGTGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTCATATCTTTATGCAGGCCCTCTGTCTCCAGAAAGTGAAGGAGCGACACCTCAAAATTATCCTAAATaGGCTTCTCAGATAGTACCC | + |
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Preference number: 2 (lower is better) Translates to: VSYLYAGPLSPESEGATPQNYPK*ASQIVP Trigger: GGGTACTATCTGAGAAGCCCATTTAGGATAATTTTG...AGGTGTCGCTCCTTCACTTTCTGGAGACAGAGGGCCTGCATAAAGATATGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCCTTGAGAAATGATCAGGCTGGACAAGAAAACCTGGTACTTATTTACATAACAGTGAGCTGGATATaGCCCTTGATATGGCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: ASLRNDQAGQENLVLIYITVSWI*PLIWPH Trigger: ATGAGGCCATATCAAGGGTCATATCCAGCTCACTGT...TATGTAAATAAGTACCAGGTTTTCTTGTCCAGCCTGATCATTTCTCAAGGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAGATTATATTGCAACAACATATCTAATCCTCAATTCTCCATGCCTTGGGGGTGTCTACTGCATCCTTaGGAAATGATCAGGCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: SRLYCNNISNPQFSMPWGCLLHP*EMIRLD Trigger: GTCCAGCCTGATCATTTCTCAAGGATGCAGTAGACA...CCCCCAAGGCATGGAGAATTGAGGATTAGATATGTTGTTGCAATATAATCTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR GCA 90 bp | TATCTAATCCTCAATTCTCCATGCCTTGGGGGCTATGTCTACTGCATCCTTGAGATCACTAATGTGCCCTaGACCTTAATATTTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: YLILNSPCLGGYVYCILEITNVP*TLIFQS Trigger: ACTCTGAAATATTAAGGTGCAGGGCACATTAGTGAT...CTCAAGGATGCAGTAGACATAGCCCCCAAGGCATGGAGAATTGAGGATTAGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCCTTGAGAAATGATCAGGCTGGACAAGAAAACCTGGTACTTATTTACATAATCACACATGAGACATaGTCACCAGAAGACAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: ASLRNDQAGQENLVLIYIITHET*SPEDSE Trigger: CTCACTGTCTTCTGGTGATCATGTCTCATGTGTGAT...TATGTAAATAAGTACCAGGTTTTCTTGTCCAGCCTGATCATTTCTCAAGGATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAAATTGTGCTCAGCCATCTCAAGCCCCATTTGCTTTTTCAGCACACATTTTGCTTTGGAATTATGTTaGATAGAAAGGCCACACAGA | + |
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Preference number: 2 (lower is better) Translates to: CKLCSAISSPICFFSTHFALELC*IERPHR Trigger: TCTGTGTGGCCTTTCTATGCAACATAATTCCAAAGC...AAAATGTGTGCTGAAAAAGCAAATGGGGCTTGAGATGGCTGAGCACAATTTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR CCA 90 bp | ACAACATATCTAATCCTCAATTCTCCATGCCTTGGGGGCTATGTCTACTGCATCGAACTCTTCTCTACCTaGAGAACAATAAGAAGACAT | + |
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Preference number: 2 (lower is better) Translates to: TTYLILNSPCLGGYVYCIELFST*RTIRRH Trigger: ATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTC...GATGCAGTAGACATAGCCCCCAAGGCATGGAGAATTGAGGATTAGATATGTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 |
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| 3UTR-3UTR CCA 90 bp | GCATCCTTGAGAAATGATCAGGCTGGACAAGAAAACCTGGTACTTATTTACATATATCAACAGGCAGGTTaGGTGTCCAGTAAGTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: ASLRNDQAGQENLVLIYIYQQAG*VSSKFC Trigger: GCAAAACTTACTGGACACCCAACCTGCCTGTTGATA...TATGTAAATAAGTACCAGGTTTTCTTGTCCAGCCTGATCATTTCTCAAGGATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR CAA 90 bp | TCAAGGAAACCAAAAGAAAGAGTGTTGTCTTTGTTTCTCAAGGGATaGAAATCGGCTTGGCTTCTTTTCTGTCCTAGGAAAGAGGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: SRKPKERVLSLFLKG*KSAWLLFCPRKEVY Trigger: ATACACCTCTTTCCTAGGACAGAAAAGAAGCCAAGCCGATTTCAATCCCTTGAGAAACAAAGACAACACTCTTTCTTTTGGTTTCCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGAGTAGATTATATTGCAACAACATATCTAATCCTCAATTCTCCATGCCTATCACACATGAGACATaGTCACCAGAAGACAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: PESRLYCNNISNPQFSMPITHET*SPEDSE Trigger: CTCACTGTCTTCTGGTGATCATGTCTCATGTGTGAT...AGGCATGGAGAATTGAGGATTAGATATGTTGTTGCAATATAATCTACTCTCTGG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATGAGCATCTCCTGCATCTTACTGTCTTATAGAAGCTTTTCCGAAGGATTTTTAGACTCTGAAGGGTaGTGCTCTAACCAGGTACAA | + |
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Preference number: 2 (lower is better) Translates to: FMSISCILLSYRSFSEGFLDSEG*CSNQVQ Trigger: TTGTACCTGGTTAGAGCAGCACCCTTCAGAGTCTAA...AAATCCTTCGGAAAAGCTTCTATAAGACAGTAAGATGCAGGAGATGCTCATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR CCA 90 bp | AATACCATGCAAATTGTGCTCAGCCATCTCAAGCCCCATTTGCTTTTTCAGCACCTGGACAAGAAAACCTaGTACTTATTTACATACAGA | + |
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Preference number: 2 (lower is better) Translates to: NTMQIVLSHLKPHLLFQHLDKKT*YLFTYR Trigger: TCTGTATGTAAATAAGTACCAGGTTTTCTTGTCCAG...GTGCTGAAAAAGCAAATGGGGCTTGAGATGGCTGAGCACAATTTGCATGGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAGGCTGGACAAGAAAACCTGGTACTTATTTACATACAGACTACTATTTACAGAAAGGCCACACAGATaGACATCCACAAAATCAAGG | + |
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Preference number: 2 (lower is better) Translates to: IRLDKKTWYLFTYRLLFTERPHR*TSTKSR Trigger: CCTTGATTTTGTGGATGTCCATCTGTGTGGCCTTTC...TGTAAATAGTAGTCTGTATGTAAATAAGTACCAGGTTTTCTTGTCCAGCCTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATGAGCATCTCCTGCATCTTACTGTCTTATAGAAGCTTTTCCGAAGGATTTATGAGAGCTTACAGATaGAACTGTGCCTACAGTATC | + |
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Preference number: 2 (lower is better) Translates to: FMSISCILLSYRSFSEGFMRAYR*NCAYSI Trigger: GATACTGTAGGCACAGTTCCATCTGTAAGCTCTCAT...AAATCCTTCGGAAAAGCTTCTATAAGACAGTAAGATGCAGGAGATGCTCATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGAGTAGATTATATTGCAACAACATATCTAATCCTCAATTCTCCATGCCTGCTTTGGAATTATGTTaGATAGAAAGGCCACACAGA | + |
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Preference number: 2 (lower is better) Translates to: PESRLYCNNISNPQFSMPALELC*IERPHR Trigger: TCTGTGTGGCCTTTCTATGCAACATAATTCCAAAGC...AGGCATGGAGAATTGAGGATTAGATATGTTGTTGCAATATAATCTACTCTCTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGGCAATAGGTGTGTGTTTACAAACAGATGCTACCACAAAGTATATTTGATCATCACTAATGTGCCCTaGACCTTAATATTTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: SGNRCVFTNRCYHKVYLIITNVP*TLIFQS Trigger: ACTCTGAAATATTAAGGTGCAGGGCACATTAGTGAT...GATCAAATATACTTTGTGGTAGCATCTGTTTGTAAACACACACCTATTGCCAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR GCA 90 bp | TGTAGTTTTCAAGGCATTAGACACTGTGAGAAGACAACATCAACAACTCTAAATGCTTTGGAATTATGTTaGATAGAAAGGCCACACAGA | + |
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Preference number: 2 (lower is better) Translates to: CSFQGIRHCEKTTSTTLNALELC*IERPHR Trigger: TCTGTGTGGCCTTTCTATGCAACATAATTCCAAAGC...ATTTAGAGTTGTTGATGTTGTCTTCTCACAGTGTCTAATGCCTTGAAAACTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATGAGCATCTCCTGCATCTTACTGTCTTATAGAAGCTTTTCCGAAGGATTTGAACTCTTCTCTACCTaGAGAACAATAAGAAGACAT | + |
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Preference number: 2 (lower is better) Translates to: FMSISCILLSYRSFSEGFELFST*RTIRRH Trigger: ATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTC...AAATCCTTCGGAAAAGCTTCTATAAGACAGTAAGATGCAGGAGATGCTCATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160777.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCATCTTACTGTCTTATAGAAGCTTTTCCGAAGGATTTATTCTGGAATTGACTGCAGTTGTAATCTaGGTTAAACCAAGATCATTG | + |
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Preference number: 2 (lower is better) Translates to: SCILLSYRSFSEGFILELTAVVI*VKPRSL Trigger: CAATGATCTTGGTTTAACCCAGATTACAACTGCAGT...CAATTCCAGAATAAATCCTTCGGAAAAGCTTCTATAAGACAGTAAGATGCAGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160777.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCATCTTACTGTCTTATAGAAGCTTTTCCGAAGGATTTATTCTGGAATTGTTACACACACTTTGCTaGTATTTAAGCCTCACACTT | + |
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Preference number: 2 (lower is better) Translates to: SCILLSYRSFSEGFILELLHTLC*YLSLTL Trigger: AAGTGTGAGGCTTAAATACCAGCAAAGTGTGTGTAA...CAATTCCAGAATAAATCCTTCGGAAAAGCTTCTATAAGACAGTAAGATGCAGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCATCTTACTGTCTTATAGAAGCTTTTCCGAAGGATTTATTCTGGAATTGCAAAATTATCCTAAATaGGCTTCTCAGATAGTACCC | + |
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Preference number: 2 (lower is better) Translates to: SCILLSYRSFSEGFILELQNYPK*ASQIVP Trigger: GGGTACTATCTGAGAAGCCCATTTAGGATAATTTTG...CAATTCCAGAATAAATCCTTCGGAAAAGCTTCTATAAGACAGTAAGATGCAGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR GCA 90 bp | GATCAGGCTGGACAAGAAAACCTGGTACTTATTTACATACAGACTACTATTTACAAATTACACACACTTTaGTGGTATTTAAGCCTCACA | + |
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Preference number: 2 (lower is better) Translates to: DQAGQENLVLIYIQTTIYKLHTL*WYLSLT Trigger: TGTGAGGCTTAAATACCAGCAAAGTGTGTGTAATTT...GTAAATAGTAGTCTGTATGTAAATAAGTACCAGGTTTTCTTGTCCAGCCTGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGGCAATAGGTGTGTGTTTACAAACAGATGCTACCACAAAGTATATTTGATCAAATTACACACACTTTaGTGGTATTTAAGCCTCACA | + |
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Preference number: 2 (lower is better) Translates to: SGNRCVFTNRCYHKVYLIKLHTL*WYLSLT Trigger: TGTGAGGCTTAAATACCAGCAAAGTGTGTGTAATTT...GATCAAATATACTTTGTGGTAGCATCTGTTTGTAAACACACACCTATTGCCAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| 3UTR TCA 72 bp | GTCATATCTTTATGCAGGCCCTCTGTCTCCAGAAAGTaGAGGAGCGACACCTGTGAGACAGCTGGTGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: VISLCRPSVSRK*RSDTCETAGDE Trigger: CTCATCACCAGCTGTCTCACAGGTGTCGCTCCTTCACTTTCTGGAGACAGAGGGCCTGCATAAAGATATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR GCA 72 bp | TGTTGCCAGGATCTGCTGTGCTCTGTTCTTCAGACTTaGTGCTCCTACTCAGCTAGATCACTAATGTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: CCQDLLCSVLQT*CSYSARSLMCP Trigger: AGGGCACATTAGTGATCTAGCTGAGTAGGAGCAGCAAGTCTGAAGAACAGAGCACAGCAGATCCTGGCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR GCA 72 bp | CCTAGGAAAGAGGTGTATTGTTGCCAGGATCTGCTGTaGTCTGTTCTTCAGACTTGCTGCTCCTACTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PRKEVYCCQDLL*SVLQTCCSYSA Trigger: AGCTGAGTAGGAGCAGCAAGTCTGAAGAACAGAGCACAGCAGATCCTGGCAACAATACACCTCTTTCCTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR TCA 72 bp | TTCTCCATGCCTTGGGGGCTATGTCTACTGCATCCTTaGGAAATGATCAGGCTGGACAAGAAAACCTGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: FSMPWGLCLLHP*EMIRLDKKTWY Trigger: GTACCAGGTTTTCTTGTCCAGCCTGATCATTTCTCAAGGATGCAGTAGACATAGCCCCCAAGGCATGGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR GCA 72 bp | TCTGTCCTAGGAAAGAGGTGTATTGTTGCCAGGATCTaGTGTGCTCTGTTCTTCAGACTTGCTGCTCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: SVLGKRCIVARI*CALFFRLAAPT Trigger: AGTAGGAGCAGCAAGTCTGAAGAACAGAGCACAGCAGATCCTGGCAACAATACACCTCTTTCCTAGGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR CCA 72 bp | ACACCTGTGAGACAGCTGGTGATGAGAGCTTACAGATaGAACTGTGCCTACAGTATCGAGGTTCACACATCT | + |
|
Preference number: 3 (lower is better) Translates to: TPVRQLVMRAYR*NCAYSIEVHTS Trigger: AGATGTGTGAACCTCGATACTGTAGGCACAGTTCCATCTGTAAGCTCTCATCACCAGCTGTCTCACAGGTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR TCA 72 bp | CAAGTCTCAGACATAGCAAGCCATAACTTCTTTGTTTaGTGGGACAAGCTTCTGGGAACCTCAAGCATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QVSDIASHNFFV*WDKLLGTSSMG Trigger: CCCCATGCTTGAGGTTCCCAGAAGCTTGTCCCATCAAACAAAGAAGTTATGGCTTGCTATGTCTGAGACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR CCA 72 bp | ACTCTCCCTCCCTGGGAGACACTCACTCTCTTTCCATaGGATTCCAACTTAGTTATCAAGAAATGCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TLPPWETLTLFP*DSNLVIKKCRK Trigger: TTTCCTGCATTTCTTGATAACTAAGTTGGAATCCCATGGAAAGAGAGTGAGTGTCTCCCAGGGAGGGAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACAAATGTCAATATGGTGCTCTCCACCAGTGTCAGGGTCTGAATCCAAGTTCAGCTTTGGAATTATGTaGCATAGAAAGGCCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: SQMSIWCSPPVSGSESKFSFGIM*HRKATQ Trigger: CTGTGTGGCCTTTCTATGCAACATAATTCCAAAGCT...GAACTTGGATTCAGACCCTGACACTGGTGGAGAGCACCATATTGACATTTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR TCA 72 bp | TGCCTTGGGGGCTATGTCTACTGCATCCTTGAGAAATaGTCAGGCTGGACAAGAAAACCTGGTACTTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: CLGGYVYCILEK*SGWTRKPGTYL Trigger: TAAATAAGTACCAGGTTTTCTTGTCCAGCCTGATCATTTCTCAAGGATGCAGTAGACATAGCCCCCAAGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR-3UTR CAA 90 bp | AATACCATGCAAATTGTGCTCAGCCATCTCAAGCCCCATTTGCTTTTTCAGCACCCAAAAGAAAGAGTGTaGTCTTTGTTTCTCAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: NTMQIVLSHLKPHLLFQHPKERV*SLFLKG Trigger: TCCCTTGAGAAACAAAGACAACACTCTTTCTTTTGG...GTGCTGAAAAAGCAAATGGGGCTTGAGATGGCTGAGCACAATTTGCATGGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGATTCCAACTTAGTTATCAAGAAATGCAGGAAACAGAGAGATTAGGAGGGATGTCTACTGCATCCTaGAGAAATGATCAGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: MGFQLSYQEMQETERLGGMSTAS*RNDQAG Trigger: TCCAGCCTGATCATTTCTCAAGGATGCAGTAGACAT...CCCTCCTAATCTCTCTGTTTCCTGCATTTCTTGATAACTAAGTTGGAATCCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAACAACTCTAAATAGGTTCACAAATGTCAATATGGTGCTCTCCACCAGTGTCTTGTTTCTCAAGGGATaGAAATCGGCTTGGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: STTLNRFTNVNMVLSTSVLFLKG*KSAWLL Trigger: AAGAAGCCAAGCCGATTTCAATCCCTTGAGAAACAA...GACACTGGTGGAGAGCACCATATTGACATTTGTGAACCTATTTAGAGTTGTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCAAATTGTGCTCAGCCATCTCAAGCCCCATTTGCTTTTTCAGCACACATTTGAAAGAGTGTTGTCTTaGTTTCTCAAGGGATTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: MQIVLSHLKPHLLFQHTFERVLS*FLKGLK Trigger: TTTCAATCCCTTGAGAAACAAAGACAACACTCTTTC...AAATGTGTGCTGAAAAAGCAAATGGGGCTTGAGATGGCTGAGCACAATTTGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATCCTTGAGAAATGATCAGGCTGGACAAGAAAACCTGGTACTTATTTACATAAGCTTTGGAATTATGTaGCATAGAAAGGCCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: ASLRNDQAGQENLVLIYISFGIM*HRKATQ Trigger: CTGTGTGGCCTTTCTATGCAACATAATTCCAAAGCT...TATGTAAATAAGTACCAGGTTTTCTTGTCCAGCCTGATCATTTCTCAAGGATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTTATCAAGAAATGCAGGAAACAGAGAGATTAGGAGGGCATATGGAATGTAGCTTTGGAATTATGTaGCATAGAAAGGCCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: LSYQEMQETERLGGHMECSFGIM*HRKATQ Trigger: CTGTGTGGCCTTTCTATGCAACATAATTCCAAAGCT...ACATTCCATATGCCCTCCTAATCTCTCTGTTTCCTGCATTTCTTGATAACTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR TCA 72 bp | CAAAAGAAAGAGTGTTGTCTTTGTTTCTCAAGGGATTaGAATCGGCTTGGCTTCTTTTCTGTCCTAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QKKECCLCFSRD*NRLGFFSVLGK Trigger: CTTTCCTAGGACAGAAAAGAAGCCAAGCCGATTTCAATCCCTTGAGAAACAAAGACAACACTCTTTCTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR GCA 72 bp | TATATTGCAACAACATATCTAATCCTCAATTCTCCATaGCTTGGGGGCTATGTCTACTGCATCCTTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: YIATTYLILNSP*LGGYVYCILEK Trigger: TTTCTCAAGGATGCAGTAGACATAGCCCCCAAGGCATGGAGAATTGAGGATTAGATATGTTGTTGCAATATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAGAGTAGATTATATTGCAACAACATATCTAATCCTCAATTCTCCATGCCTTTGTTTCTCAAGGGATaGAAATCGGCTTGGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PESRLYCNNISNPQFSMPLFLKG*KSAWLL Trigger: AAGAAGCCAAGCCGATTTCAATCCCTTGAGAAACAA...AGGCATGGAGAATTGAGGATTAGATATGTTGTTGCAATATAATCTACTCTCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTATGAGCATCTCCTGCATCTTACTGTCTTATAGAAGCTTTTCCGAAGGATTTTTGTTTCTCAAGGGATaGAAATCGGCTTGGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FMSISCILLSYRSFSEGFLFLKG*KSAWLL Trigger: AAGAAGCCAAGCCGATTTCAATCCCTTGAGAAACAA...AAATCCTTCGGAAAAGCTTCTATAAGACAGTAAGATGCAGGAGATGCTCATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR-3UTR CAA 90 bp | TTATATTGCAACAACATATCTAATCCTCAATTCTCCATGCCTTGGGGGCTATGTCCAAAAGAAAGAGTGTaGTCTTTGTTTCTCAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LYCNNISNPQFSMPWGLCPKERV*SLFLKG Trigger: TCCCTTGAGAAACAAAGACAACACTCTTTCTTTTGG...ACATAGCCCCCAAGGCATGGAGAATTGAGGATTAGATATGTTGTTGCAATATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR TCA 72 bp | AATGTCAATATGGTGCTCTCCACCAGTGTCAGGGTCTaGATCCAAGTTCTTCCTAAGATATTCTATTATCAT | + |
|
Preference number: 3 (lower is better) Translates to: NVNMVLSTSVRV*IQVLPKIFYYH Trigger: ATGATAATAGAATATCTTAGGAAGAACTTGGATTCAGACCCTGACACTGGTGGAGAGCACCATATTGACATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR TCA 72 bp | ACCTTAATATTTCAGAGTATGACATGTCTAAGTTACTaGATACCTCACCTTTCCACTTCAGACTGCAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TLIFQSMTCLSY*IPHLSTSDCSC Trigger: ACAACTGCAGTCTGAAGTGGAAAGGTGAGGTATTCAGTAACTTAGACATGTCATACTCTGAAATATTAAGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGTTTTCAAGGCATTAGACACTGTGAGAAGACAACATCAACAACTCTAAATGTTAAACCAAGATCATaGAACTCTTCTCTACCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CSFQGIRHCEKTTSTTLNVKPRS*NSSLPG Trigger: TCCAGGTAGAGAAGAGTTCAATGATCTTGGTTTAAC...ATTTAGAGTTGTTGATGTTGTCTTCTCACAGTGTCTAATGCCTTGAAAACTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGTTTTCAAGGCATTAGACACTGTGAGAAGACAACATCAACAACTCTAAATCCAAAAGAAAGAGTGTaGTCTTTGTTTCTCAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: CSFQGIRHCEKTTSTTLNPKERV*SLFLKG Trigger: TCCCTTGAGAAACAAAGACAACACTCTTTCTTTTGG...ATTTAGAGTTGTTGATGTTGTCTTCTCACAGTGTCTAATGCCTTGAAAACTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR GCA 72 bp | TCTTTTATTTTCTTCTCTAGAGCTTTGGAATTATGTTaGATAGAAAGGCCACACAGATGGACATCCACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SFIFFSRALELC*IERPHRWTSTK Trigger: TTTTGTGGATGTCCATCTGTGTGGCCTTTCTATGCAACATAATTCCAAAGCTCTAGAGAAGAAAATAAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR GCA 72 bp | AGAGAATCTGGCAATAGGTGTGTGTTTACAAACAGATaGTACCACAAAGTATATTTGATCAAAGCTAACATT | + |
|
Preference number: 3 (lower is better) Translates to: RESGNRCVFTNR*YHKVYLIKANI Trigger: AATGTTAGCTTTGATCAAATATACTTTGTGGTAGCATCTGTTTGTAAACACACACCTATTGCCAGATTCTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTCCTAGGAAAGAGGTGTATTGTTGCCAGGATCTGCTGTGCTCTGTTCTTCCAGCTGCTGATCCTCTaGGCCCACACTGCCATTACT | + |
|
Preference number: 4 (lower is better) Translates to: SVLGKRCIVARICCALFFQLLIL*AHTAIT Trigger: AGTAATGGCAGTGTGGGCTCAGAGGATCAGCAGCTG...GAAGAACAGAGCACAGCAGATCCTGGCAACAATACACCTCTTTCCTAGGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR GCA 90 bp | AATACCATGCAAATTGTGCTCAGCCATCTCAAGCCCCATTTGCTTTTTCAGCACCTGTGCTGTGGGAGGTaGTTCCCAGAGCCTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NTMQIVLSHLKPHLLFQHLCCGR*FPEPPP Trigger: TGGTGGAGGCTCTGGGAAGCACCTCCCACAGCACAG...GTGCTGAAAAAGCAAATGGGGCTTGAGATGGCTGAGCACAATTTGCATGGTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR CAA 72 bp | GACAAGCTTCTGGGAACCTCAAGCATGGGGAGCCACTaGAGGGTTGCAGAATTAGACAAAAGCACTGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DKLLGTSSMGSH*RVAELDKSTGC Trigger: GCAACCAGTGCTTTTGTCTAATTCTGCAACCCTCAAGTGGCTCCCCATGCTTGAGGTTCCCAGAAGCTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR GCA 90 bp | ATGCAAATTGTGCTCAGCCATCTCAAGCCCCATTTGCTTTTTCAGCACACATTTCTGTGCTGTGGGAGGTaGTTCCCAGAGCCTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: MQIVLSHLKPHLLFQHTFLCCGR*FPEPPP Trigger: TGGTGGAGGCTCTGGGAAGCACCTCCCACAGCACAG...AAATGTGTGCTGAAAAAGCAAATGGGGCTTGAGATGGCTGAGCACAATTTGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCTTTGTTTCTCAAGGGATTGAAATCGGCTTGGCTTCTTTTCTGTCCTAGGTGGAGAGGGCAGCTGTaGTGTGGGAGGTGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLFLKGLKSAWLLFCPRWRGQL*CGRCFP Trigger: TGGGAAGCACCTCCCACAGCACAGCTGCCCTCTCCA...CCTAGGACAGAAAAGAAGCCAAGCCGATTTCAATCCCTTGAGAAACAAAGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR GCA 90 bp | TGCCAGGATCTGCTGTGCTCTGTTCTTCAGACTTGCTGCTCCTACTCAGCTAGAGAACAGGATTCAGGCTaGTGTTGGTATAACCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CQDLLCSVLQTCCSYSAREQDSG*CWYNPR Trigger: CCTTGGGTTATACCAACAGCAGCCTGAATCCTGTTC...TCTAGCTGAGTAGGAGCAGCAAGTCTGAAGAACAGAGCACAGCAGATCCTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR TCA 90 bp | AATACCATGCAAATTGTGCTCAGCCATCTCAAGCCCCATTTGCTTTTTCAGCACCAGCTGCTGATCCTCTaGGCCCACACTGCCATTACT | + |
|
Preference number: 4 (lower is better) Translates to: NTMQIVLSHLKPHLLFQHQLLIL*AHTAIT Trigger: AGTAATGGCAGTGTGGGCTCAGAGGATCAGCAGCTG...GTGCTGAAAAAGCAAATGGGGCTTGAGATGGCTGAGCACAATTTGCATGGTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR GCA 90 bp | GCAGTTGTAATCTGGGTTAAACCAAGATCATTGAACTCTTCTCTACCTGGAGAACTGTGCTGTGGGAGGTaGTTCCCAGAGCCTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: AVVIWVKPRSLNSSLPGELCCGR*FPEPPP Trigger: TGGTGGAGGCTCTGGGAAGCACCTCCCACAGCACAG...TTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGTTTAACCCAGATTACAACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR CCA 90 bp | AATACCATGCAAATTGTGCTCAGCCATCTCAAGCCCCATTTGCTTTTTCAGCACAGAGCAGGTAGGGCCTaGATCTCCTCGGAAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTMQIVLSHLKPHLLFQHRAGRA*ISSEDL Trigger: CAGATCTTCCGAGGAGATCCAGGCCCTACCTGCTCT...GTGCTGAAAAAGCAAATGGGGCTTGAGATGGCTGAGCACAATTTGCATGGTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR CCA 90 bp | ACAACATATCTAATCCTCAATTCTCCATGCCTTGGGGGCTATGTCTACTGCATCAGAGCAGGTAGGGCCTaGATCTCCTCGGAAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTYLILNSPCLGGYVYCIRAGRA*ISSEDL Trigger: CAGATCTTCCGAGGAGATCCAGGCCCTACCTGCTCT...GATGCAGTAGACATAGCCCCCAAGGCATGGAGAATTGAGGATTAGATATGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAGATCATTGAACTCTTCTCTACCTGGAGAACAATAAGAAGACATTTCCACAGGGCAGCTGTGCTGTaGGAGGTGCTTCCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TKIIELFSTWRTIRRHFHRAAVL*EVLPRA Trigger: GGCTCTGGGAAGCACCTCCCACAGCACAGCTGCCCT...GTGGAAATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR TCA 90 bp | TACCCCCTTAATCAATACCATGCAAATTGTGCTCAGCCATCTCAAGCCCCATTTCATCCACATCTTCCCTaGCTTTGGTGCCTCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YPLNQYHANCAQPSQAPFHPHLP*LWCLQG Trigger: TCCTTGGAGGCACCAAAGTCAGGGAAGATGTGGATG...AAATGGGGCTTGAGATGGCTGAGCACAATTTGCATGGTATTGATTAAGGGGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR GCA 90 bp | GTTGTAATCTGGGTTAAACCAAGATCATTGAACTCTTCTCTACCTGGAGAACAACTGTGCTGTGGGAGGTaGTTCCCAGAGCCTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VVIWVKPRSLNSSLPGEQLCCGR*FPEPPP Trigger: TGGTGGAGGCTCTGGGAAGCACCTCCCACAGCACAG...TTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGTTTAACCCAGATTACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR GCA 90 bp | AAGATCATTGAACTCTTCTCTACCTGGAGAACAATAAGAAGACATTTCCACGACTGGAGAGGGCAGCTGTaGTGTGGGAGGTGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KIIELFSTWRTIRRHFHDWRGQL*CGRCFP Trigger: TGGGAAGCACCTCCCACAGCACAGCTGCCCTCTCCA...GTCGTGGAAATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGATTATATTGCAACAACATATCTAATCCTCAATTCTCCATGCCTTGGGGGTGGAGAGGGCAGCTGTaGTGTGGGAGGTGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRLYCNNISNPQFSMPWGWRGQL*CGRCFP Trigger: TGGGAAGCACCTCCCACAGCACAGCTGCCCTCTCCA...CCCCCAAGGCATGGAGAATTGAGGATTAGATATGTTGTTGCAATATAATCTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTTGCCAGGATCTGCTGTGCTCTGTTCTTCAGACTTGCTGCTCCTACTCAGTACAGAAATAATAGCTaGAGAGGGCAGCTGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IVARICCALFFRLAAPTQYRNNS*RGQLCC Trigger: ACAGCACAGCTGCCCTCTCCAGCTATTATTTCTGTA...CTGAGTAGGAGCAGCAAGTCTGAAGAACAGAGCACAGCAGATCCTGGCAACAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTTGTAATCTGGGTTAAACCAAGATCATTGAACTCTTCTCTACCTGGAGAAAGAGCAGGTAGGGCCTaGATCTCCTCGGAAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVVIWVKPRSLNSSLPGERAGRA*ISSEDL Trigger: CAGATCTTCCGAGGAGATCCAGGCCCTACCTGCTCT...TTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGTTTAACCCAGATTACAACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| 3UTR CAA 72 bp | ATTCTCCATGCCTTGGGGGCTATGTCTACTGCATCCTaGAGAAATGATCAGGCTGGACAAGAAAACCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILHALGAMSTAS*RNDQAGQENLV Trigger: TACCAGGTTTTCTTGTCCAGCCTGATCATTTCTCAAGGATGCAGTAGACATAGCCCCCAAGGCATGGAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR TCA 90 bp | AAGATCATTGAACTCTTCTCTACCTGGAGAACAATAAGAAGACATTTCCACGACCAGCTGCTGATCCTCTaGGCCCACACTGCCATTACT | + |
|
Preference number: 4 (lower is better) Translates to: KIIELFSTWRTIRRHFHDQLLIL*AHTAIT Trigger: AGTAATGGCAGTGTGGGCTCAGAGGATCAGCAGCTG...GTCGTGGAAATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR GCA 90 bp | TATCTAATCCTCAATTCTCCATGCCTTGGGGGCTATGTCTACTGCATCCTTGAGACAGATGATGAAGACTaGAACTACTACCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: YLILNSPCLGGYVYCILETDDED*NYYQHQ Trigger: CTGGTGCTGGTAGTAGTTGCAGTCTTCATCATCTGT...CTCAAGGATGCAGTAGACATAGCCCCCAAGGCATGGAGAATTGAGGATTAGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGTTTTCAAGGCATTAGACACTGTGAGAAGACAACATCAACAACTCTAAATTGGAGAGGGCAGCTGTaGTGTGGGAGGTGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSFQGIRHCEKTTSTTLNWRGQL*CGRCFP Trigger: TGGGAAGCACCTCCCACAGCACAGCTGCCCTCTCCA...ATTTAGAGTTGTTGATGTTGTCTTCTCACAGTGTCTAATGCCTTGAAAACTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR GCA 90 bp | ACAACATATCTAATCCTCAATTCTCCATGCCTTGGGGGCTATGTCTACTGCATCGAACAGGATTCAGGCTaGTGTTGGTATAACCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTYLILNSPCLGGYVYCIEQDSG*CWYNPR Trigger: CCTTGGGTTATACCAACAGCAGCCTGAATCCTGTTC...GATGCAGTAGACATAGCCCCCAAGGCATGGAGAATTGAGGATTAGATATGTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAGATCATTGAACTCTTCTCTACCTGGAGAACAATAAGAAGACATTTCCACAGAGCAGGTAGGGCCTaGATCTCCTCGGAAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKIIELFSTWRTIRRHFHRAGRA*ISSEDL Trigger: CAGATCTTCCGAGGAGATCCAGGCCCTACCTGCTCT...GTGGAAATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR TCA 90 bp | TTTATGAGCATCTCCTGCATCTTACTGTCTTATAGAAGCTTTTCCGAAGGATTTCAGCTGCTGATCCTCTaGGCCCACACTGCCATTACT | + |
|
Preference number: 4 (lower is better) Translates to: FMSISCILLSYRSFSEGFQLLIL*AHTAIT Trigger: AGTAATGGCAGTGTGGGCTCAGAGGATCAGCAGCTG...AAATCCTTCGGAAAAGCTTCTATAAGACAGTAAGATGCAGGAGATGCTCATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR TCA 90 bp | AAGATCATTGAACTCTTCTCTACCTGGAGAACAATAAGAAGACATTTCCACGACCATCCACATCTTCCCTaGCTTTGGTGCCTCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KIIELFSTWRTIRRHFHDHPHLP*LWCLQG Trigger: TCCTTGGAGGCACCAAAGTCAGGGAAGATGTGGATG...GTCGTGGAAATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAAACCAAAAGAAAGAGTGTTGTCTTTGTTTCTCAAGGGATTGAAATCGGCCATCCACATCTTCCCTaGCTTTGGTGCCTCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KETKRKSVVFVSQGIEIGHPHLP*LWCLQG Trigger: TCCTTGGAGGCACCAAAGTCAGGGAAGATGTGGATG...GCCGATTTCAATCCCTTGAGAAACAAAGACAACACTCTTTCTTTTGGTTTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR TCA 90 bp | TATCTAATCCTCAATTCTCCATGCCTTGGGGGCTATGTCTACTGCATCCTTGAGATGGAAGCAGGATCCTaGACTGTGTTTCTAACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YLILNSPCLGGYVYCILEMEAGS*TVFLTL Trigger: TAGAGTTAGAAACACAGTTCAGGATCCTGCTTCCAT...CTCAAGGATGCAGTAGACATAGCCCCCAAGGCATGGAGAATTGAGGATTAGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCATATCTTTATGCAGGCCCTCTGTCTCCAGAAAGTGAAGGAGCGACACCTAGTAACCAAAGCATCTaGCAAAGCCAGGTTAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: VSYLYAGPLSPESEGATPSNQSI*QSQVKY Trigger: ATATTTAACCTGGCTTTGGCAGATGCTTTGGTTACT...AGGTGTCGCTCCTTCACTTTCTGGAGACAGAGGGCCTGCATAAAGATATGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR TCA 90 bp | ATCACTAATGTGCCCTGCACCTTAATATTTCAGAGTATGACATGTCTAAGTTACCATCCACATCTTCCCTaGCTTTGGTGCCTCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ITNVPCTLIFQSMTCLSYHPHLP*LWCLQG Trigger: TCCTTGGAGGCACCAAAGTCAGGGAAGATGTGGATG...GTAACTTAGACATGTCATACTCTGAAATATTAAGGTGCAGGGCACATTAGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCTTTGTTTCTCAAGGGATTGAAATCGGCTTGGCTTCTTTTCTGTCCTAGGAGACACAGATCTTCATaGAGAGATCCCACCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLFLKGLKSAWLLFCPRRHRSS*RDPTRN Trigger: ATTCCTGGTGGGATCTCTTCATGAAGATCTGTGTCT...CCTAGGACAGAAAAGAAGCCAAGCCGATTTCAATCCCTTGAGAAACAAAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAGATCATTGAACTCTTCTCTACCTGGAGAACAATAAGAAGACATTTCCACCTCCCACATCTCTCATaGAAGCAGGATCCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TKIIELFSTWRTIRRHFHLPHLS*KQDPEL Trigger: CAGTTCAGGATCCTGCTTCCATGAGAGATGTGGGAG...GTGGAAATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTTGTAATCTGGGTTAAACCAAGATCATTGAACTCTTCTCTACCTGGAGAAAGACACAGATCTTCATaGAGAGATCCCACCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AVVIWVKPRSLNSSLPGERHRSS*RDPTRN Trigger: ATTCCTGGTGGGATCTCTTCATGAAGATCTGTGTCT...TTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGTTTAACCCAGATTACAACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGACACTCACTCTCTTTCCATGGGATTCCAACTTAGTTATCAAGAAATGATGGAAGCAGGATCCTaGACTGTGTTTCTAACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LGDTHSLSMGFQLSYQEMMEAGS*TVFLTL Trigger: TAGAGTTAGAAACACAGTTCAGGATCCTGCTTCCAT...CATTTCTTGATAACTAAGTTGGAATCCCATGGAAAGAGAGTGAGTGTCTCCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR GCA 90 bp | ACCAAGATCATTGAACTCTTCTCTACCTGGAGAACAATAAGAAGACATTTCCACGAACAGGATTCAGGCTaGTGTTGGTATAACCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKIIELFSTWRTIRRHFHEQDSG*CWYNPR Trigger: CCTTGGGTTATACCAACAGCAGCCTGAATCCTGTTC...GTGGAAATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR GCA 90 bp | AAACCAAAAGAAAGAGTGTTGTCTTTGTTTCTCAAGGGATTGAAATCGGCTTGGGAACAGGATTCAGGCTaGTGTTGGTATAACCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPKERVLSLFLKGLKSAWEQDSG*CWYNPR Trigger: CCTTGGGTTATACCAACAGCAGCCTGAATCCTGTTC...CCAAGCCGATTTCAATCCCTTGAGAAACAAAGACAACACTCTTTCTTTTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR CCA 90 bp | ATCACTAATGTGCCCTGCACCTTAATATTTCAGAGTATGACATGTCTAAGTTACCTCCCACATCTCTCATaGAAGCAGGATCCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: ITNVPCTLIFQSMTCLSYLPHLS*KQDPEL Trigger: CAGTTCAGGATCCTGCTTCCATGAGAGATGTGGGAG...GTAACTTAGACATGTCATACTCTGAAATATTAAGGTGCAGGGCACATTAGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR CCA 90 bp | TTTATGAGCATCTCCTGCATCTTACTGTCTTATAGAAGCTTTTCCGAAGGATTTCTCCCACATCTCTCATaGAAGCAGGATCCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: FMSISCILLSYRSFSEGFLPHLS*KQDPEL Trigger: CAGTTCAGGATCCTGCTTCCATGAGAGATGTGGGAG...AAATCCTTCGGAAAAGCTTCTATAAGACAGTAAGATGCAGGAGATGCTCATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR CCA 90 bp | TATCTAATCCTCAATTCTCCATGCCTTGGGGGCTATGTCTACTGCATCCTTGAGGAACTCTTCTCTACCTaGAGAACAATAAGAAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: YLILNSPCLGGYVYCILEELFST*RTIRRH Trigger: ATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTC...CTCAAGGATGCAGTAGACATAGCCCCCAAGGCATGGAGAATTGAGGATTAGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239100.2 |
||
| CDS-3UTR TCA 90 bp | GTTGTAATCTGGGTTAAACCAAGATCATTGAACTCTTCTCTACCTGGAGAACAAAGACACAGATCTTCATaGAGAGATCCCACCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VVIWVKPRSLNSSLPGEQRHRSS*RDPTRN Trigger: ATTCCTGGTGGGATCTCTTCATGAAGATCTGTGTCT...TTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGTTTAACCCAGATTACAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAATTGTGCTCAGCCATCTCAAGCCCCATTTGCTTTTTCAGCACACATTTTTCATCATCAGGAAACTaGAAGGAGCATTCAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: CKLCSAISSPICFFSTHFSSSGN*KEHSMT Trigger: TGTCATTGAATGCTCCTTGCAGTTTCCTGATGATGA...AAAATGTGTGCTGAAAAAGCAAATGGGGCTTGAGATGGCTGAGCACAATTTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR GCA 90 bp | ACCAAGATCATTGAACTCTTCTCTACCTGGAGAACAATAAGAAGACATTTCCACACAGATGATGAAGACTaGAACTACTACCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKIIELFSTWRTIRRHFHTDDED*NYYQHQ Trigger: CTGGTGCTGGTAGTAGTTGCAGTCTTCATCATCTGT...GTGGAAATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTAATCTGGGTTAAACCAAGATCATTGAACTCTTCTCTACCTGGAGAACAATACAGAAATAATAGCTaGAGAGGGCAGCTGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VVIWVKPRSLNSSLPGEQYRNNS*RGQLCC Trigger: ACAGCACAGCTGCCCTCTCCAGCTATTATTTCTGTA...TTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGTTTAACCCAGATTACAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGAAATGCAGGAAACAGAGAGATTAGGAGGGCATATGGAATGTTAAAGAAGTACAGAAATAATAGCTaGAGAGGGCAGCTGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRNAGNREIRRAYGMLKKYRNNS*RGQLCC Trigger: ACAGCACAGCTGCCCTCTCCAGCTATTATTTCTGTA...CTTCTTTAACATTCCATATGCCCTCCTAATCTCTCTGTTTCCTGCATTTCTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGCAATAGGTGTGTGTTTACAAACAGATGCTACCACAAAGTATATTTGATCAGACACAGATCTTCATaGAGAGATCCCACCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SGNRCVFTNRCYHKVYLIRHRSS*RDPTRN Trigger: ATTCCTGGTGGGATCTCTTCATGAAGATCTGTGTCT...GATCAAATATACTTTGTGGTAGCATCTGTTTGTAAACACACACCTATTGCCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR TCA 90 bp | ACCAAGATCATTGAACTCTTCTCTACCTGGAGAACAATAAGAAGACATTTCCACATGGAAGCAGGATCCTaGACTGTGTTTCTAACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TKIIELFSTWRTIRRHFHMEAGS*TVFLTL Trigger: TAGAGTTAGAAACACAGTTCAGGATCCTGCTTCCAT...GTGGAAATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR TCA 90 bp | TTATATTGCAACAACATATCTAATCCTCAATTCTCCATGCCTTGGGGGCTATGTATGGAAGCAGGATCCTaGACTGTGTTTCTAACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LYCNNISNPQFSMPWGLCMEAGS*TVFLTL Trigger: TAGAGTTAGAAACACAGTTCAGGATCCTGCTTCCAT...ACATAGCCCCCAAGGCATGGAGAATTGAGGATTAGATATGTTGTTGCAATATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR GCA 90 bp | TGCAAATTGTGCTCAGCCATCTCAAGCCCCATTTGCTTTTTCAGCACACATTTTAGTAACCAAAGCATCTaGCAAAGCCAGGTTAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: CKLCSAISSPICFFSTHFSNQSI*QSQVKY Trigger: ATATTTAACCTGGCTTTGGCAGATGCTTTGGTTACT...AAAATGTGTGCTGAAAAAGCAAATGGGGCTTGAGATGGCTGAGCACAATTTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR GCA 90 bp | GCAGTTGTAATCTGGGTTAAACCAAGATCATTGAACTCTTCTCTACCTGGAGAATCATCATCAGGAAACTaGAAGGAGCATTCAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: AVVIWVKPRSLNSSLPGESSSGN*KEHSMT Trigger: TGTCATTGAATGCTCCTTGCAGTTTCCTGATGATGA...TTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGTTTAACCCAGATTACAACTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAGTAGATTATATTGCAACAACATATCTAATCCTCAATTCTCCATGCCTACAGATGATGAAGACTaGAACTACTACCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PESRLYCNNISNPQFSMPTDDED*NYYQHQ Trigger: CTGGTGCTGGTAGTAGTTGCAGTCTTCATCATCTGT...AGGCATGGAGAATTGAGGATTAGATATGTTGTTGCAATATAATCTACTCTCTGG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGCATCTTACTGTCTTATAGAAGCTTTTCCGAAGGATTTATTCTGGAATTGACAGATGATGAAGACTaGAACTACTACCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCILLSYRSFSEGFILELTDDED*NYYQHQ Trigger: CTGGTGCTGGTAGTAGTTGCAGTCTTCATCATCTGT...CAATTCCAGAATAAATCCTTCGGAAAAGCTTCTATAAGACAGTAAGATGCAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGCAATAGGTGTGTGTTTACAAACAGATGCTACCACAAAGTATATTTGATCTACAGAAATAATAGCTaGAGAGGGCAGCTGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGNRCVFTNRCYHKVYLIYRNNS*RGQLCC Trigger: ACAGCACAGCTGCCCTCTCCAGCTATTATTTCTGTA...GATCAAATATACTTTGTGGTAGCATCTGTTTGTAAACACACACCTATTGCCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| 3UTR CAA 72 bp | CCAAAAGAAAGAGTGTTGTCTTTGTTTCTCAAGGGATaGAAATCGGCTTGGCTTCTTTTCTGTCCTAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PKERVLSLFLKG*KSAWLLFCPRK Trigger: TTTCCTAGGACAGAAAAGAAGCCAAGCCGATTTCAATCCCTTGAGAAACAAAGACAACACTCTTTCTTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTTGTAATCTGGGTTAAACCAAGATCATTGAACTCTTCTCTACCTGGAGAAAGTAGTCAATGGAAATaGCAATCTTGCATAGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: AVVIWVKPRSLNSSLPGESSQWK*QSCIAH Trigger: ATGTGCTATGCAAGATTGTCATTTCCATTGACTACT...TTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGTTTAACCCAGATTACAACTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTTGTAATCTGGGTTAAACCAAGATCATTGAACTCTTCTCTACCTGGAGAAAGTAACCAAAGCATCTaGCAAAGCCAGGTTAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: AVVIWVKPRSLNSSLPGESNQSI*QSQVKY Trigger: ATATTTAACCTGGCTTTGGCAGATGCTTTGGTTACT...TTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGTTTAACCCAGATTACAACTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTTGTAATCTGGGTTAAACCAAGATCATTGAACTCTTCTCTACCTGGAGAAGATGTTGATGATCTTTaGTTTCAAAGGTGTTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AVVIWVKPRSLNSSLPGEDVDDL*FQRCSE Trigger: TTCCGAACACCTTTGAAAGCAAAGATCATCAACATC...TTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGTTTAACCCAGATTACAACTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR GCA 90 bp | AAGATCATTGAACTCTTCTCTACCTGGAGAACAATAAGAAGACATTTCCACGACTCATCATCAGGAAACTaGAAGGAGCATTCAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: KIIELFSTWRTIRRHFHDSSSGN*KEHSMT Trigger: TGTCATTGAATGCTCCTTGCAGTTTCCTGATGATGA...GTCGTGGAAATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
||
| CDS-3UTR GCA 90 bp | TTATATTGCAACAACATATCTAATCCTCAATTCTCCATGCCTTGGGGGCTATGTTCATCATCAGGAAACTaGAAGGAGCATTCAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: LYCNNISNPQFSMPWGLCSSSGN*KEHSMT Trigger: TGTCATTGAATGCTCCTTGCAGTTTCCTGATGATGA...ACATAGCCCCCAAGGCATGGAGAATTGAGGATTAGATATGTTGTTGCAATATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR GCA 90 bp | AAGGAAACCAAAAGAAAGAGTGTTGTCTTTGTTTCTCAAGGGATTGAAATCGGCAGTAACCAAAGCATCTaGCAAAGCCAGGTTAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: KETKRKSVVFVSQGIEIGSNQSI*QSQVKY Trigger: ATATTTAACCTGGCTTTGGCAGATGCTTTGGTTACT...GCCGATTTCAATCCCTTGAGAAACAAAGACAACACTCTTTCTTTTGGTTTCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
||
| CDS-3UTR CCA 90 bp | ACATCAACAACTCTAAATAGGTTCACAAATGTCAATATGGTGCTCTCCACCAGTACTGCAGTTGTAATCTaGGTTAAACCAAGATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: TSTTLNRFTNVNMVLSTSTAVVI*VKPRSL Trigger: CAATGATCTTGGTTTAACCCAGATTACAACTGCAGT...ACTGGTGGAGAGCACCATATTGACATTTGTGAACCTATTTAGAGTTGTTGATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239100.2 |
||
| CDS TCA 90 bp | AGGGATGGCCGGAGAGATGTGCGCGGACTCCAGCTGCTGATCCTCTaGGCCCACACTGCCATTACTGTCGGATTCTGCCCAGTTGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RDGRRDVRGLQLLIL*AHTAITVGFCPVGE Trigger: TTCCCCAACTGGGCAGAATCCGACAGTAATGGCAGTGTGGGCTCAGAGGATCAGCAGCTGGAGTCCGCGCACATCTCTCCGGCCATCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS GCA 90 bp | GAGAGATGTGCGCGGACTCCAGCTGCTGATCCTCTGAGCCCACACTaGCATTACTGTCGGATTCTGCCCAGTTGGGGAACCAAGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: ERCARTPAADPLSPH*HYCRILPSWGTKSC Trigger: GCAGCTCTTGGTTCCCCAACTGGGCAGAATCCGACAGTAATGGCAGTGTGGGCTCAGAGGATCAGCAGCTGGAGTCCGCGCACATCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS CCA 90 bp | TCAGGCTGCTGTTGGTATAACCCAAGGCAATACAGAAATAATAGCTaGAGAGGGCAGCTGTGCTGTGGGAGGTGCTTCCCAGAGCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SGCCWYNPRQYRNNS*RGQLCCGRCFPEPP Trigger: TGGAGGCTCTGGGAAGCACCTCCCACAGCACAGCTGCCCTCTCCAGCTATTATTTCTGTATTGCCTTGGGTTATACCAACAGCAGCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS-3UTR CAA 90 bp | CTGGGAACCTCAAGCATGGGGAGCCACTTGAGGGTTGCAGAATTAGACAAAAGCACATCTTCCCTGACTTaGGTGCCTCCAAGGACTATC | + |
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Preference number: 5 (lower is better) Translates to: LGTSSMGSHLRVAELDKSTSSLT*VPPRTI Trigger: GATAGTCCTTGGAGGCACCAAAGTCAGGGAAGATGT...GCTTTTGTCTAATTCTGCAACCCTCAAGTGGCTCCCCATGCTTGAGGTTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS TCA 90 bp | ACTGGCTTATTCATCCCTCCCACATCTCTCATGGAAGCAGGATCCTaGACTGTGTTTCTAACTCTATTGGTGCTCTGGCGCTCCATTCGC | + |
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Preference number: 5 (lower is better) Translates to: TGLFIPPTSLMEAGS*TVFLTLLVLWRSIR Trigger: GCGAATGGAGCGCCAGAGCACCAATAGAGTTAGAAACACAGTTCAGGATCCTGCTTCCATGAGAGATGTGGGAGGGATGAATAAGCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS-3UTR CAA 90 bp | TCACAAATGTCAATATGGTGCTCTCCACCAGTGTCAGGGTCTGAATCCAAGTTCAACCAAGAGCTGCTGTaGGGGAGAAGGCAAGCACTG | + |
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Preference number: 5 (lower is better) Translates to: SQMSIWCSPPVSGSESKFNQELL*GRRQAL Trigger: CAGTGCTTGCCTTCTCCCCAACAGCAGCTCTTGGTT...GAACTTGGATTCAGACCCTGACACTGGTGGAGAGCACCATATTGACATTTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS-3UTR CAA 90 bp | TACCCCCTTAATCAATACCATGCAAATTGTGCTCAGCCATCTCAAGCCCCATTTAACCAAGAGCTGCTGTaGGGGAGAAGGCAAGCACTG | + |
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Preference number: 5 (lower is better) Translates to: YPLNQYHANCAQPSQAPFNQELL*GRRQAL Trigger: CAGTGCTTGCCTTCTCCCCAACAGCAGCTCTTGGTT...AAATGGGGCTTGAGATGGCTGAGCACAATTTGCATGGTATTGATTAAGGGGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS-3UTR CAA 90 bp | GTTGTAATCTGGGTTAAACCAAGATCATTGAACTCTTCTCTACCTGGAGAACAAAACCAAGAGCTGCTGTaGGGGAGAAGGCAAGCACTG | + |
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Preference number: 5 (lower is better) Translates to: VVIWVKPRSLNSSLPGEQNQELL*GRRQAL Trigger: CAGTGCTTGCCTTCTCCCCAACAGCAGCTCTTGGTT...TTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGTTTAACCCAGATTACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
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| CDS-3UTR CAA 90 bp | ATGCAAATTGTGCTCAGCCATCTCAAGCCCCATTTGCTTTTTCAGCACACATTTACATCTTCCCTGACTTaGGTGCCTCCAAGGACTATC | + |
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Preference number: 5 (lower is better) Translates to: MQIVLSHLKPHLLFQHTFTSSLT*VPPRTI Trigger: GATAGTCCTTGGAGGCACCAAAGTCAGGGAAGATGT...AAATGTGTGCTGAAAAAGCAAATGGGGCTTGAGATGGCTGAGCACAATTTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS-3UTR CAA 90 bp | GAGGAATCCAGTGGAAATCATACCAAGACCAAATTCCAGAGAGTAGATTATATTAACCAAGAGCTGCTGTaGGGGAGAAGGCAAGCACTG | + |
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Preference number: 5 (lower is better) Translates to: EESSGNHTKTKFQRVDYINQELL*GRRQAL Trigger: CAGTGCTTGCCTTCTCCCCAACAGCAGCTCTTGGTT...AATATAATCTACTCTCTGGAATTTGGTCTTGGTATGATTTCCACTGGATTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS GCA 90 bp | ATCTTCATGAAGAGATCCCACCAGGAATATTCATCATCAGGAAACTaGAAGGAGCATTCAATGACATCCACATCTTCCCTGACTTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: IFMKRSHQEYSSSGN*KEHSMTSTSSLTLV Trigger: CACCAAAGTCAGGGAAGATGTGGATGTCATTGAATGCTCCTTGCAGTTTCCTGATGATGAATATTCCTGGTGGGATCTCTTCATGAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS-3UTR CAA 90 bp | AAGATCATTGAACTCTTCTCTACCTGGAGAACAATAAGAAGACATTTCCACGACAACATGACCAGAGAATaGCCCACTAAGCCCACCACA | + |
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Preference number: 5 (lower is better) Translates to: KIIELFSTWRTIRRHFHDNMTRE*PTKPTT Trigger: TGTGGTGGGCTTAGTGGGCAATTCTCTGGTCATGTT...GTCGTGGAAATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
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| CDS-3UTR CAA 90 bp | GTTGTAATCTGGGTTAAACCAAGATCATTGAACTCTTCTCTACCTGGAGAACAAACATCTTCCCTGACTTaGGTGCCTCCAAGGACTATC | + |
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Preference number: 5 (lower is better) Translates to: VVIWVKPRSLNSSLPGEQTSSLT*VPPRTI Trigger: GATAGTCCTTGGAGGCACCAAAGTCAGGGAAGATGT...TTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGTTTAACCCAGATTACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
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| CDS-3UTR CAA 90 bp | AAGATCATTGAACTCTTCTCTACCTGGAGAACAATAAGAAGACATTTCCACGACACATCTTCCCTGACTTaGGTGCCTCCAAGGACTATC | + |
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Preference number: 5 (lower is better) Translates to: KIIELFSTWRTIRRHFHDTSSLT*VPPRTI Trigger: GATAGTCCTTGGAGGCACCAAAGTCAGGGAAGATGT...GTCGTGGAAATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
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| CDS-3UTR CAA 90 bp | TATCTAATCCTCAATTCTCCATGCCTTGGGGGCTATGTCTACTGCATCCTTGAGAGCCAAATGCAGATGTaGATGATCTTTGCTTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: YLILNSPCLGGYVYCILESQMQM*MIFAFK Trigger: TTTGAAAGCAAAGATCATCAACATCTGCATTTGGCT...CTCAAGGATGCAGTAGACATAGCCCCCAAGGCATGGAGAATTGAGGATTAGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS-3UTR CAA 90 bp | ACCAAGATCATTGAACTCTTCTCTACCTGGAGAACAATAAGAAGACATTTCCACATGGAAATGACAATCTaGCATAGCACATCTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: TKIIELFSTWRTIRRHFHMEMTI*HSTSPK Trigger: TTTTGGAGATGTGCTATGCAAGATTGTCATTTCCAT...GTGGAAATGTCTTCTTATTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
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| CDS-3UTR CAA 90 bp | AAACCAAAAGAAAGAGTGTTGTCTTTGTTTCTCAAGGGATTGAAATCGGCTTGGATGGAAATGACAATCTaGCATAGCACATCTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: KPKERVLSLFLKGLKSAWMEMTI*HSTSPK Trigger: TTTTGGAGATGTGCTATGCAAGATTGTCATTTCCAT...CCAAGCCGATTTCAATCCCTTGAGAAACAAAGACAACACTCTTTCTTTTGGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS-3UTR CAA 90 bp | TTATATTGCAACAACATATCTAATCCTCAATTCTCCATGCCTTGGGGGCTATGTATGGAAATGACAATCTaGCATAGCACATCTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: LYCNNISNPQFSMPWGLCMEMTI*HSTSPK Trigger: TTTTGGAGATGTGCTATGCAAGATTGTCATTTCCAT...ACATAGCCCCCAAGGCATGGAGAATTGAGGATTAGATATGTTGTTGCAATATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS-3UTR CAA 90 bp | GTTGTAATCTGGGTTAAACCAAGATCATTGAACTCTTCTCTACCTGGAGAACAAAGCCAAATGCAGATGTaGATGATCTTTGCTTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: VVIWVKPRSLNSSLPGEQSQMQM*MIFAFK Trigger: TTTGAAAGCAAAGATCATCAACATCTGCATTTGGCT...TTGTTCTCCAGGTAGAGAAGAGTTCAATGATCTTGGTTTAACCCAGATTACAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 |
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| CDS-3UTR CAA 90 bp | AGTAGATTATATTGCAACAACATATCTAATCCTCAATTCTCCATGCCTTGGGGGAGCCAAATGCAGATGTaGATGATCTTTGCTTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: SRLYCNNISNPQFSMPWGSQMQM*MIFAFK Trigger: TTTGAAAGCAAAGATCATCAACATCTGCATTTGGCT...CCCCCAAGGCATGGAGAATTGAGGATTAGATATGTTGTTGCAATATAATCTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS-3UTR CAA 90 bp | AAACCAAAAGAAAGAGTGTTGTCTTTGTTTCTCAAGGGATTGAAATCGGCTTGGAGCCAAATGCAGATGTaGATGATCTTTGCTTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: KPKERVLSLFLKGLKSAWSQMQM*MIFAFK Trigger: TTTGAAAGCAAAGATCATCAACATCTGCATTTGGCT...CCAAGCCGATTTCAATCCCTTGAGAAACAAAGACAACACTCTTTCTTTTGGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS-3UTR CAA 90 bp | GAGGAATCCAGTGGAAATCATACCAAGACCAAATTCCAGAGAGTAGATTATATTATGGAAATGACAATCTaGCATAGCACATCTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: EESSGNHTKTKFQRVDYIMEMTI*HSTSPK Trigger: TTTTGGAGATGTGCTATGCAAGATTGTCATTTCCAT...AATATAATCTACTCTCTGGAATTTGGTCTTGGTATGATTTCCACTGGATTCCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS-3UTR CAA 90 bp | ATCAGGCTGGACAAGAAAACCTGGTACTTATTTACATACAGACTACTATTTACAGTTAAACCAAGATCATaGAACTCTTCTCTACCTGGA | + |
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Preference number: 5 (lower is better) Translates to: IRLDKKTWYLFTYRLLFTVKPRS*NSSLPG Trigger: TCCAGGTAGAGAAGAGTTCAATGATCTTGGTTTAAC...TGTAAATAGTAGTCTGTATGTAAATAAGTACCAGGTTTTCTTGTCCAGCCTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239100.2 |
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| CDS TCA 72 bp | GGGATGGCCGGAGAGATGTGCGCGGACTCCAGCTGCTaGTCCTCTGAGCCCACACTGCCATTACTGTCGGAT | + |
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Preference number: 6 (lower is better) Translates to: GMAGEMCADSSC*SSEPTLPLLSD Trigger: ATCCGACAGTAATGGCAGTGTGGGCTCAGAGGATCAGCAGCTGGAGTCCGCGCACATCTCTCCGGCCATCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS CCA 72 bp | GGGGAGAAGGCAAGCACTGGGAGAGCAGGTAGGGCCTaGATCTCCTCGGAAGATCTGAATGGGGGACTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GEKASTGRAGRA*ISSEDLNGGLH Trigger: ATGGAGTCCCCCATTCAGATCTTCCGAGGAGATCCAGGCCCTACCTGCTCTCCCAGTGCTTGCCTTCTCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS CAA 72 bp | TCGGATTCTGCCCAGTTGGGGAACCAAGAGCTGCTGTaGGGGAGAAGGCAAGCACTGGGAGAGCAGGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: SDSAQLGNQELL*GRRQALGEQVG Trigger: CCCTACCTGCTCTCCCAGTGCTTGCCTTCTCCCCAACAGCAGCTCTTGGTTCCCCAACTGGGCAGAATCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS TCA 72 bp | TTCATCCCTCCCACATCTCTCATGGAAGCAGGATCCTaGACTGTGTTTCTAACTCTATTGGTGCTCTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: FIPPTSLMEAGS*TVFLTLLVLWR Trigger: GCGCCAGAGCACCAATAGAGTTAGAAACACAGTTCAGGATCCTGCTTCCATGAGAGATGTGGGAGGGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS CCA 72 bp | TGTTGGTATAACCCAAGGCAATACAGAAATAATAGCTaGAGAGGGCAGCTGTGCTGTGGGAGGTGCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: CWYNPRQYRNNS*RGQLCCGRCFP Trigger: TGGGAAGCACCTCCCACAGCACAGCTGCCCTCTCCAGCTATTATTTCTGTATTGCCTTGGGTTATACCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS CAA 72 bp | AAGGAGCATTCAATGACATCCACATCTTCCCTGACTTaGGTGCCTCCAAGGACTATCGCTGATATACCAACA | + |
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Preference number: 6 (lower is better) Translates to: KEHSMTSTSSLT*VPPRTIADIPT Trigger: TGTTGGTATATCAGCGATAGTCCTTGGAGGCACCAAAGTCAGGGAAGATGTGGATGTCATTGAATGCTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS GCA 72 bp | AAGAGATCCCACCAGGAATATTCATCATCAGGAAACTaGAAGGAGCATTCAATGACATCCACATCTTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: KRSHQEYSSSGN*KEHSMTSTSSL Trigger: CAGGGAAGATGTGGATGTCATTGAATGCTCCTTGCAGTTTCCTGATGATGAATATTCCTGGTGGGATCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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| CDS CAA 90 bp | ATCGCTGATATACCAACAGATGATGCCAGGAGCCAAATGCAGATGTaGATGATCTTTGCTTTCAAAGGTGTTCGGAAGTCCAAAGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: IADIPTDDARSQMQM*MIFAFKGVRKSKAF Trigger: GAAAGCTTTGGACTTCCGAACACCTTTGAAAGCAAAGATCATCAACATCTGCATTTGGCTCCTGGCATCATCTGTTGGTATATCAGCGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027038.11 ENSMUST00000160339.2 ENSMUST00000160777.8 ENSMUST00000239100.2 |
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