Pregenerated sensors for OPRD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050511Ensembl transcript IDs: ENSMUST00000056336.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACTGGGGCAGTTCCAGTCCCTGGGAGTCATGGACACCAGGCATCTaGTGGACAGCCAGACGCTGGGAGAAGGGGCAAGAGTCTTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: DWGSSSPWESWTPGI*WTARRWEKGQESSS Trigger: GGAAGAAGACTCTTGCCCCTTCTCCCAGCGTCTGGCTGTCCATCAGATGCCTGGTGTCCATGACTCCCAGGGACTGGAACTGCCCCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR TCA 90 bp | TTGCTCCCTCAGGCAGTGGAGGAGGAACGGGGACAGGGCAAACAATaGCATCCAGGGGAGCTGAGATCCAGGAGAGCCTGGATCAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LLPQAVEEERGQGKQ*HPGELRSRRAWISF Trigger: GAAACTGATCCAGGCTCTCCTGGATCTCAGCTCCCCTGGATGTCATTGTTTGCCCTGTCCCCGTTCCTCCTCCACTGCCTGAGGGAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR CCA 90 bp | GGACTCTCAGCCAAACCAAATCATCGACCCCATCACTGCCCCTCCTaGTTCCTGGAGCTGGAATCCTTGGGTCTTGGACTGGAGCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: GLSAKPNHRPHHCPS*FLELESLGLGLELG Trigger: ACCCAGCTCCAGTCCAAGACCCAAGGATTCCAGCTCCAGGAACCAGGAGGGGCAGTGATGGGGTCGATGATTTGGTTTGGCTGAGAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR GCA 90 bp | CAAATGCTGGGACTCTCAGCCAAACCAAATCATCGACCCCATCACTaGCCCTCCTGGTTCCTGGAGCTGGAATCCTTGGGTCTTGGACTG | + |
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Preference number: 1 (lower is better) Translates to: QMLGLSAKPNHRPHH*PSWFLELESLGLGL Trigger: CAGTCCAAGACCCAAGGATTCCAGCTCCAGGAACCAGGAGGGGCAGTGATGGGGTCGATGATTTGGTTTGGCTGAGAGTCCCAGCATTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR GCA 90 bp | CCTCTGCTTCTGCCCACTGTCCACAGCCCCACAGGGATACAGGGCTaGGGGTTCTCTTCAAACCAGACTCAGAGACACCCACATAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: PLLLPTVHSPTGIQG*GFSSNQTQRHPHSF Trigger: AAAACTATGTGGGTGTCTCTGAGTCTGGTTTGAAGAGAACCCGCAGCCCTGTATCCCTGTGGGGCTGTGGACAGTGGGCAGAAGCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR GCA 90 bp | TTGACTGCGACTGGGGTTACAGATGGCTGTGAGCCACTATGTGGGTaGTGGGAATCGAACCTATGTCCTCTGCAAGAGAGTCACGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: LTATGVTDGCEPLCG*WESNLCPLQESHVP Trigger: GGGCACGTGACTCTCTTGCAGAGGACATAGGTTCGATTCCCAGCACCCACATAGTGGCTCACAGCCATCTGTAACCCCAGTCGCAGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR CCA 90 bp | CCTCCTGGTTCCTGGAGCTGGAATCCTTGGGTCTTGGACTGGAGCTaGGTGTTCAAAAAGGCCAGAACCCGATGTTATCTCAAGGCGGAG | + |
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Preference number: 1 (lower is better) Translates to: PPGSWSWNPWVLDWS*VFKKARTRCYLKAE Trigger: CTCCGCCTTGAGATAACATCGGGTTCTGGCCTTTTTGAACACCCAGCTCCAGTCCAAGACCCAAGGATTCCAGCTCCAGGAACCAGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR CCA 90 bp | CCATCACTGCCCCTCCTGGTTCCTGGAGCTGGAATCCTTGGGTCTTaGACTGGAGCTGGGTGTTCAAAAAGGCCAGAACCCGATGTTATC | + |
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Preference number: 1 (lower is better) Translates to: PSLPLLVPGAGILGS*TGAGCSKRPEPDVI Trigger: GATAACATCGGGTTCTGGCCTTTTTGAACACCCAGCTCCAGTCCAAGACCCAAGGATTCCAGCTCCAGGAACCAGGAGGGGCAGTGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR CCA 90 bp | ACTGCCCCTCCTGGTTCCTGGAGCTGGAATCCTTGGGTCTTGGACTaGAGCTGGGTGTTCAAAAAGGCCAGAACCCGATGTTATCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: TAPPGSWSWNPWVLD*SWVFKKARTRCYLK Trigger: CTTGAGATAACATCGGGTTCTGGCCTTTTTGAACACCCAGCTCCAGTCCAAGACCCAAGGATTCCAGCTCCAGGAACCAGGAGGGGCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR CCA 90 bp | CACAAAGGCTTACTCGGTTTCAGGGGTCCCTTTAGAACTTGCTTTTaGGGCCCTTGTTCAGGATCCAGGGAGCCTCTGCTTCTGCCCACT | + |
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Preference number: 1 (lower is better) Translates to: HKGLLGFRGPFRTCF*GPCSGSREPLLLPT Trigger: AGTGGGCAGAAGCAGAGGCTCCCTGGATCCTGAACAAGGGCCCCAAAAGCAAGTTCTAAAGGGACCCCTGAAACCGAGTAAGCCTTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR TCA 90 bp | AGTCTAGCTCCCGCCTCCCGGAAGGCAGTTAGGTCCCTGCTGGAGTaGCAGCCTGCAGCTTTTGTTCCAAAGAAATGGCTGTCAAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: SLAPASRKAVRSLLE*QPAAFVPKKWLSKR Trigger: TCTTTTTGACAGCCATTTCTTTGGAACAAAAGCTGCAGGCTGTCACTCCAGCAGGGACCTAACTGCCTTCCGGGAGGCGGGAGCTAGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR GCA 90 bp | CCGCCTCCCGGAAGGCAGTTAGGTCCCTGCTGGAGTGACAGCCTGCAGCTTTTGCATCGACCCCATCACTaGCCCTCCTGGTTCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: PPPGRQLGPCWSDSLQLLHRPHH*PSWFLE Trigger: CTCCAGGAACCAGGAGGGGCAGTGATGGGGTCGATG...CAAAAGCTGCAGGCTGTCACTCCAGCAGGGACCTAACTGCCTTCCGGGAGGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCCACTGTCCACAGCCCCACAGGGATACAGGGCTGCGGGTTCTCTTCAAACCGGGGCGCTTATCTCCTaGCCAAACCCCAAGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: CPLSTAPQGYRAAGSLQTGALIS*PNPKLP Trigger: AGGCAGCTTGGGGTTTGGTCAGGAGATAAGCGCCCC...GGTTTGAAGAGAACCCGCAGCCCTGTATCCCTGTGGGGCTGTGGACAGTGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCTGGGTGGGGCACAAGGCCACAGTCCTTGCAAGGACACACAGCACTAAGGAGGCCTCAGCCCCCTaGCTCACGATTTACTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LPWVGHKATVLARTHSTKEASAP*LTIYSP Trigger: GGGAGAGTAAATCGTGAGGCAGGGGGCTGAGGCCTC...CTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGTGCCCCACCCAGGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCTGGGTGGGGCACAAGGCCACAGTCCTTGCAAGGACACACAGCACTAAGGGCAGTTCCAGTCCCTaGGAGTCATGGACACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LPWVGHKATVLARTHSTKGSSSP*ESWTPG Trigger: GCCTGGTGTCCATGACTCCCAGGGACTGGAACTGCC...CTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGTGCCCCACCCAGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCTGGGTGGGGCACAAGGCCACAGTCCTTGCAAGGACACACAGCACTAAGGGACAGGGCAAACAATaGCATCCAGGGGAGCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: LPWVGHKATVLARTHSTKGQGKQ*HPGELR Trigger: TCTCAGCTCCCCTGGATGTCATTGTTTGCCCTGTCC...CTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGTGCCCCACCCAGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCCACTGTCCACAGCCCCACAGGGATACAGGGCTGCGGGTTCTCTTCAAACCAGCCTCCACTATGACTaGGATTACACAGGCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: CPLSTAPQGYRAAGSLQTSLHYD*DYTGLP Trigger: GGGCAGGCCTGTGTAATCCCAGTCATAGTGGAGGCT...GGTTTGAAGAGAACCCGCAGCCCTGTATCCCTGTGGGGCTGTGGACAGTGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCTGGGTGGGGCACAAGGCCACAGTCCTTGCAAGGACACACAGCACTAAGGGGACTCAGGAGAAATaGGAGAGAGCAAAGGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: LPWVGHKATVLARTHSTKGTQEK*ERAKGH Trigger: GTGGCCCTTTGCTCTCTCCCATTTCTCCTGAGTCCC...CTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGTGCCCCACCCAGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR CAA 90 bp | GCTCTAACACAACTCTGCCCTGGGTGGGGCACAAGGCCACAGTCCTaGCAAGGACACACAGCACTAAGTCCCGTGACACCTGCTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: ALTQLCPGWGTRPQS*QGHTALSPVTPASG Trigger: TCCTGAAGCAGGTGTCACGGGACTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGTGCCCCACCCAGGGCAGAGTTGTGTTAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGCCACAGTCCTTGCAAGGACACACAGCACTAAGTCCCGTGACACCTGCTCTATGTAGACCAGGCTaGCCTCTGCCTCCCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: TRPQSLQGHTALSPVTPALCRPG*PLPPRC Trigger: GCACCTGGGAGGCAGAGGCCAGCCTGGTCTACATAG...AGCAGGTGTCACGGGACTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR CAA 90 bp | CCCATCACTGCCCCTCCTGGTTCCTGGAGCTGGAATCCTTGGGTCTaGGACTGGAGCTGGGTGTTCAAAAAGGCCAGAACCCGATGTTAT | + |
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Preference number: 2 (lower is better) Translates to: PITAPPGSWSWNPWV*DWSWVFKKARTRCY Trigger: ATAACATCGGGTTCTGGCCTTTTTGAACACCCAGCTCCAGTCCAAGACCCAAGGATTCCAGCTCCAGGAACCAGGAGGGGCAGTGATGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR CCA 90 bp | CTGACCTCCTCATGTGCACAGTGGCGGGAGCATGCCCCATCCAACACAAAATCATGGAGCTGGAATCCTTaGGTCTTGGACTGGAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LTSSCAQWREHAPSNTKSWSWNP*VLDWSW Trigger: CCAGCTCCAGTCCAAGACCCAAGGATTCCAGCTCCA...TGATTTTGTGTTGGATGGGGCATGCTCCCGCCACTGTGCACATGAGGAGGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAATGCTGGGACTCTCAGCCAAACCAAATCATCGACCCCATCACTGCCCCTCAGGAATCACCAGCTCTaGTTCCTCACCCCCACCGTT | + |
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Preference number: 2 (lower is better) Translates to: TNAGTLSQTKSSTPSLPLRNHQL*FLTPTV Trigger: AACGGTGGGGGTGAGGAAGCAGAGCTGGTGATTCCT...GAGGGGCAGTGATGGGGTCGATGATTTGGTTTGGCTGAGAGTCCCAGCATTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR CCA 90 bp | CTGACCTCCTCATGTGCACAGTGGCGGGAGCATGCCCCATCCAACACAAAATCAGGAATCCTTGGGTCTTaGACTGGAGCTGGGTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: LTSSCAQWREHAPSNTKSGILGS*TGAGCS Trigger: TGAACACCCAGCTCCAGTCCAAGACCCAAGGATTCC...TGATTTTGTGTTGGATGGGGCATGCTCCCGCCACTGTGCACATGAGGAGGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR TCA 90 bp | CACAAACACCCTACCACTGAGCTACATTCCCAGCCCTCTTTACATTTTATTTTGCCAACCTGGAGCCTTTaGTCCCTCAGGCCCCGTCCC | + |
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Preference number: 2 (lower is better) Translates to: HKHPTTELHSQPSLHFILPTWSL*SLRPRP Trigger: GGGACGGGGCCTGAGGGATCAAAGGCTCCAGGTTGG...CAAAATAAAATGTAAAGAGGGCTGGGAATGTAGCTCAGTGGTAGGGTGTTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAATGCTGGGACTCTCAGCCAAACCAAATCATCGACCCCATCACTGCCCCTCCCTTGGGTCTTGGACTaGAGCTGGGTGTTCAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: TNAGTLSQTKSSTPSLPLPWVLD*SWVFKK Trigger: CTTTTTGAACACCCAGCTCCAGTCCAAGACCCAAGG...GAGGGGCAGTGATGGGGTCGATGATTTGGTTTGGCTGAGAGTCCCAGCATTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCTGGGTGGGGCACAAGGCCACAGTCCTTGCAAGGACACACAGCACTAAGGGTCCAAGTATTTGGTaGGAATCCTTATTCATGTTA | + |
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Preference number: 2 (lower is better) Translates to: LPWVGHKATVLARTHSTKGPSIW*ESLFML Trigger: TAACATGAATAAGGATTCTCACCAAATACTTGGACC...CTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGTGCCCCACCCAGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR CAA 90 bp | TACCATGTTCATGTCTGGTGCCCACAGTTGTTGGAAAGCATTAGATaGACTGCGACTGGGGTTACAGATGGCTGTGAGCCACTATGTGGG | + |
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Preference number: 2 (lower is better) Translates to: YHVHVWCPQLLESIR*TATGVTDGCEPLCG Trigger: CCCACATAGTGGCTCACAGCCATCTGTAACCCCAGTCGCAGTCAATCTAATGCTTTCCAACAACTGTGGGCACCAGACATGAACATGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR TCA 90 bp | CACAAACACCCTACCACTGAGCTACATTCCCAGCCCTCTTTACATTTTATTTTGCCAAGCTGCCTTGCCTaGATGCCCTGTCCCCTTATC | + |
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Preference number: 2 (lower is better) Translates to: HKHPTTELHSQPSLHFILPSCLA*MPCPLI Trigger: GATAAGGGGACAGGGCATTCAGGCAAGGCAGCTTGG...CAAAATAAAATGTAAAGAGGGCTGGGAATGTAGCTCAGTGGTAGGGTGTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTATGTGTACCATGTTCATGTCTGGTGCCCACAGTTGTTGGAAAGCATTAGACATCACTGCCCCTCCTaGTTCCTGGAGCTGGAATCC | + |
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Preference number: 2 (lower is better) Translates to: MYVYHVHVWCPQLLESIRHHCPS*FLELES Trigger: GGATTCCAGCTCCAGGAACCAGGAGGGGCAGTGATG...TCTAATGCTTTCCAACAACTGTGGGCACCAGACATGAACATGGTACACATACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR CCA 90 bp | ATAATTTCTTTTAATTGGGGTTGGTGGATAAAGGTCCTTTCTGTCAAACCTGCTTGCTCCCTCAGGCAGTaGAGGAGGAACGGGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: IISFNWGWWIKVLSVKPACSLRQ*RRNGDR Trigger: CCTGTCCCCGTTCCTCCTCCACTGCCTGAGGGAGCA...AGCAGGTTTGACAGAAAGGACCTTTATCCACCAACCCCAATTAAAAGAAATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTATGTGTACCATGTTCATGTCTGGTGCCCACAGTTGTTGGAAAGCATTAGAGCTGCCTTGCCTGAATaGCCTGTCCCCTTATCTTCT | + |
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Preference number: 2 (lower is better) Translates to: MYVYHVHVWCPQLLESIRAALPE*PVPLSS Trigger: AGAAGATAAGGGGACAGGGCATTCAGGCAAGGCAGC...TCTAATGCTTTCCAACAACTGTGGGCACCAGACATGAACATGGTACACATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTATGTGTACCATGTTCATGTCTGGTGCCCACAGTTGTTGGAAAGCATTAGAACAGGGATACAGGGCTaGGGGTTCTCTTCAAACCAG | + |
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Preference number: 2 (lower is better) Translates to: MYVYHVHVWCPQLLESIRTGIQG*GFSSNQ Trigger: CTGGTTTGAAGAGAACCCGCAGCCCTGTATCCCTGT...TCTAATGCTTTCCAACAACTGTGGGCACCAGACATGAACATGGTACACATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR CAA 90 bp | ATATGTATGTATGTGTACCATGTTCATGTCTGGTGCCCACAGTTGTaGGAAAGCATTAGATTGACTGCGACTGGGGTTACAGATGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: ICMYVYHVHVWCPQL*ESIRLTATGVTDGC Trigger: ACAGCCATCTGTAACCCCAGTCGCAGTCAATCTAATGCTTTCCAACAACTGTGGGCACCAGACATGAACATGGTACACATACATACATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR CAA 90 bp | TATATATGTATGTATGTGTACCATGTTCATGTCTGGTGCCCACAGTaGTTGGAAAGCATTAGATTGACTGCGACTGGGGTTACAGATGGC | + |
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Preference number: 2 (lower is better) Translates to: YICMYVYHVHVWCPQ*LESIRLTATGVTDG Trigger: GCCATCTGTAACCCCAGTCGCAGTCAATCTAATGCTTTCCAACAACTGTGGGCACCAGACATGAACATGGTACACATACATACATATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR TCA 72 bp | CAGGCAGTGGAGGAGGAACGGGGACAGGGCAAACAATaGCATCCAGGGGAGCTGAGATCCAGGAGAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: QAVEEERGQGKQ*HPGELRSRRAW Trigger: CCAGGCTCTCCTGGATCTCAGCTCCCCTGGATGTCATTGTTTGCCCTGTCCCCGTTCCTCCTCCACTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR GCA 72 bp | TCAGCAGACTGCTTCAATAGGGAGTCAGGGGCAGGTTaGTCCCTCAGGCAGTGGAGGAGGAACGGGGACAGG | + |
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Preference number: 3 (lower is better) Translates to: SADCFNRESGAG*SLRQWRRNGDR Trigger: CCTGTCCCCGTTCCTCCTCCACTGCCTGAGGGAGCAACCTGCCCCTGACTCCCTATTGAAGCAGTCTGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR CCA 72 bp | AGGACCGGCTGGGTCAGCTCTAACACAACTCTGCCCTaGGTGGGGCACAAGGCCACAGTCCTTGCAAGGACA | + |
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Preference number: 3 (lower is better) Translates to: RTGWVSSNTTLP*VGHKATVLART Trigger: TGTCCTTGCAAGGACTGTGGCCTTGTGCCCCACCCAGGGCAGAGTTGTGTTAGAGCTGACCCAGCCGGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR TCA 72 bp | AGTTCCAGTCCCTGGGAGTCATGGACACCAGGCATCTaGTGGACAGCCAGACGCTGGGAGAAGGGGCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: SSSPWESWTPGI*WTARRWEKGQE Trigger: CTCTTGCCCCTTCTCCCAGCGTCTGGCTGTCCATCAGATGCCTGGTGTCCATGACTCCCAGGGACTGGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR GCA 72 bp | CTGCCCACTGTCCACAGCCCCACAGGGATACAGGGCTaGGGGTTCTCTTCAAACCAGACTCAGAGACACCCA | + |
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Preference number: 3 (lower is better) Translates to: LPTVHSPTGIQG*GFSSNQTQRHP Trigger: TGGGTGTCTCTGAGTCTGGTTTGAAGAGAACCCGCAGCCCTGTATCCCTGTGGGGCTGTGGACAGTGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR GCA 72 bp | AGGAAAGGACCGGCTGGGTCAGCTCTAACACAACTCTaGCCTGGGTGGGGCACAAGGCCACAGTCCTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: RKGPAGSALTQL*PGWGTRPQSLQ Trigger: TTGCAAGGACTGTGGCCTTGTGCCCCACCCAGGGCAGAGTTGTGTTAGAGCTGACCCAGCCGGTCCTTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR TCA 72 bp | CCCGCCTCCCGGAAGGCAGTTAGGTCCCTGCTGGAGTaGCAGCCTGCAGCTTTTGTTCCAAAGAAATGGCTG | + |
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Preference number: 3 (lower is better) Translates to: PASRKAVRSLLE*QPAAFVPKKWL Trigger: CAGCCATTTCTTTGGAACAAAAGCTGCAGGCTGTCACTCCAGCAGGGACCTAACTGCCTTCCGGGAGGCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR CCA 72 bp | CAAATCATCGACCCCATCACTGCCCCTCCTGGTTCCTaGAGCTGGAATCCTTGGGTCTTGGACTGGAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: QIIDPITAPPGS*SWNPWVLDWSW Trigger: CCAGCTCCAGTCCAAGACCCAAGGATTCCAGCTCCAGGAACCAGGAGGGGCAGTGATGGGGTCGATGATTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR CCA 72 bp | CCAAGTCAGTTCTCATCCCTACAGGAAAGGACCGGCTaGGTCAGCTCTAACACAACTCTGCCCTGGGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: PSQFSSLQERTG*VSSNTTLPWVG Trigger: CCCCACCCAGGGCAGAGTTGTGTTAGAGCTGACCCAGCCGGTCCTTTCCTGTAGGGATGAGAACTGACTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR GCA 72 bp | GGACTCTCAGCCAAACCAAATCATCGACCCCATCACTaGCCCTCCTGGTTCCTGGAGCTGGAATCCTTGGGT | + |
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Preference number: 3 (lower is better) Translates to: GLSAKPNHRPHH*PSWFLELESLG Trigger: ACCCAAGGATTCCAGCTCCAGGAACCAGGAGGGGCAGTGATGGGGTCGATGATTTGGTTTGGCTGAGAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR CCA 72 bp | ATCACTGCCCCTCCTGGTTCCTGGAGCTGGAATCCTTaGGTCTTGGACTGGAGCTGGGTGTTCAAAAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: ITAPPGSWSWNP*VLDWSWVFKKA Trigger: GGCCTTTTTGAACACCCAGCTCCAGTCCAAGACCCAAGGATTCCAGCTCCAGGAACCAGGAGGGGCAGTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR CCA 72 bp | CCTTCTTCCCTCAATCCCTTCAAAGCAGAGTCCGACTaGGGCAGTTCCAGTCCCTGGGAGTCATGGACACCA | + |
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Preference number: 3 (lower is better) Translates to: PSSLNPFKAESD*GSSSPWESWTP Trigger: TGGTGTCCATGACTCCCAGGGACTGGAACTGCCCCAGTCGGACTCTGCTTTGAAGGGATTGAGGGAAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| 3UTR TCA 72 bp | TGTTGGTCCTTAATTTTCCAGCCTCAGCCTCCACTATaGCTGGGATTACACAGGCCTGCCCCATCAGGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: CWSLIFQPQPPL*LGLHRPAPSGP Trigger: CGGGCCTGATGGGGCAGGCCTGTGTAATCCCAGTCATAGTGGAGGCTGAGGCTGGAAAATTAAGGACCAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR TCA 72 bp | CAGAGGAAGAGAAGCACCTCTATTAAAACTCTCCCCTaGCCTCCTCATGTGCACAGTGGCGGGAGCATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: QRKRSTSIKTLP*PPHVHSGGSMP Trigger: GGGCATGCTCCCGCCACTGTGCACATGAGGAGGTCAGGGGAGAGTTTTAATAGAGGTGCTTCTCTTCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR GCA 72 bp | CTTGCAAGGACACACAGCACTAAGTCCCGTGACACCTaGTTCAGGAGTCTGCTGTCTGCTACCTCCCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LARTHSTKSRDT*FRSLLSATSLA Trigger: TGCTAGGGAGGTAGCAGACAGCAGACTCCTGAAGCAGGTGTCACGGGACTTAGTGCTGTGTGTCCTTGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR CCA 72 bp | CCTGGTTCCTGGAGCTGGAATCCTTGGGTCTTGGACTaGAGCTGGGTGTTCAAAAAGGCCAGAACCCGATGT | + |
|
Preference number: 3 (lower is better) Translates to: PGSWSWNPWVLD*SWVFKKARTRC Trigger: ACATCGGGTTCTGGCCTTTTTGAACACCCAGCTCCAGTCCAAGACCCAAGGATTCCAGCTCCAGGAACCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACTAAATTGCCCAGGCTGTTGGTCCTTAATTTTCCAGCCTCAGCCTCCACTATCCAACCTGGAGCCTTaGATCCCTCAGGCCCCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: TLNCPGCWSLIFQPQPPLSNLEP*IPQAPS Trigger: GGACGGGGCCTGAGGGATCAAAGGCTCCAGGTTGGA...TAGTGGAGGCTGAGGCTGGAAAATTAAGGACCAACAGCCTGGGCAATTTAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR CCA 72 bp | TCCTGGAGCTGGAATCCTTGGGTCTTGGACTGGAGCTaGGTGTTCAAAAAGGCCAGAACCCGATGTTATCTC | + |
|
Preference number: 3 (lower is better) Translates to: SWSWNPWVLDWS*VFKKARTRCYL Trigger: GAGATAACATCGGGTTCTGGCCTTTTTGAACACCCAGCTCCAGTCCAAGACCCAAGGATTCCAGCTCCAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR TCA 72 bp | CGCTTATCTCCTGACCAAACCCCAAGCTGCCTTGCCTaGATGCCCTGTCCCCTTATCTTCTCTAAGATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RLSPDQTPSCLA*MPCPLIFSKMR Trigger: TCTCATCTTAGAGAAGATAAGGGGACAGGGCATTCAGGCAAGGCAGCTTGGGGTTTGGTCAGGAGATAAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR TCA 72 bp | ATGTCTGGTGCCCACAGTTGTTGGAAAGCATTAGATTaGCTGCGACTGGGGTTACAGATGGCTGTGAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: MSGAHSCWKALD*LRLGLQMAVSH Trigger: GTGGCTCACAGCCATCTGTAACCCCAGTCGCAGTCAATCTAATGCTTTCCAACAACTGTGGGCACCAGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR TCA 72 bp | GGGTTGGTGGATAAAGGTCCTTTCTGTCAAACCTGCTaGCTGGAGTTCAACCCCTATGAACTCAGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GLVDKGPFCQTC*LEFNPYELRRQ Trigger: CTGCCTCCTGAGTTCATAGGGGTTGAACTCCAGTCAGCAGGTTTGACAGAAAGGACCTTTATCCACCAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR GCA 72 bp | TCCCCTGACCTCCTCATGTGCACAGTGGCGGGAGCATaGCCCATCCAACACAAAATCAATCAACGTTTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SPDLLMCTVAGA*PIQHKINQRLN Trigger: GTTTAAACGTTGATTGATTTTGTGTTGGATGGGGCATGCTCCCGCCACTGTGCACATGAGGAGGTCAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR CCA 72 bp | TGGTGGATAAAGGTCCTTTCTGTCAAACCTGCTGACTaGAGTTCAACCCCTATGAACTCAGGAGGCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: WWIKVLSVKPAD*SSTPMNSGGRG Trigger: TCCTCTGCCTCCTGAGTTCATAGGGGTTGAACTCCAGTCAGCAGGTTTGACAGAAAGGACCTTTATCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGGCCACAGTCCTTGCAAGGACACACAGCACTAAGTCCCGTGACACCTGCTGGTTGGTTTTGTTGTTaGGAAGGTTTTTGGTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TRPQSLQGHTALSPVTPAGWFCC*EGFWLV Trigger: AACCAACCAAAAACCTTCCAAACAACAAAACCAACC...AGCAGGTGTCACGGGACTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR TCA 72 bp | TTGCCTGAATGCCCTGTCCCCTTATCTTCTCTAAGATaGGAGATCCTCCCCATAACACAAATGCTGGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: LPECPVPLSSLR*EILPITQMLGL Trigger: GAGTCCCAGCATTTGTGTTATGGGGAGGATCTCTCATCTTAGAGAAGATAAGGGGACAGGGCATTCAGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR TCA 72 bp | TTTCTGTCAAACCTGCTGACTGGAGTTCAACCCCTATaGACTCAGGAGGCAGAGGAAGAGAAGCACCTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FLSNLLTGVQPL*TQEAEEEKHLY Trigger: ATAGAGGTGCTTCTCTTCCTCTGCCTCCTGAGTTCATAGGGGTTGAACTCCAGTCAGCAGGTTTGACAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR TCA 72 bp | CTCACGATTTACTCTCCCTACAACACACACTTTTATTaGGACAGGGTCTCACCATGTAGCCCTGAGCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LTIYSPYNTHFY*DRVSPCSPEHP Trigger: AGGATGCTCAGGGCTACATGGTGAGACCCTGTCTCAATAAAAGTGTGTGTTGTAGGGAGAGTAAATCGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR GCA 72 bp | AGAATTAAATTTGTTTTTACAAGGATGTCAGCAGACTaGTTCAATAGGGAGTCAGGGGCAGGTTGCTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RIKFVFTRMSAD*FNRESGAGCSL Trigger: GAGGGAGCAACCTGCCCCTGACTCCCTATTGAAGCAGTCTGCTGACATCCTTGTAAAAACAAATTTAATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAATTTCTTTTAATTGGGGTTGGTGGATAAAGGTCCTTTCTGTCAAACCTGCTACAAGGCCACAGTCCTaGCAAGGACACACAGCACTA | + |
|
Preference number: 3 (lower is better) Translates to: IISFNWGWWIKVLSVKPATRPQS*QGHTAL Trigger: TAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGT...AGCAGGTTTGACAGAAAGGACCTTTATCCACCAACCCCAATTAAAAGAAATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR TCA 72 bp | CATCCAACACAAAATCAATCAACGTTTAAACAATTTTaGAATCACACCTGCAATACCTATACTCATGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HPTQNQSTFKQF*NHTCNTYTHEA Trigger: GGCCTCATGAGTATAGGTATTGCAGGTGTGATTTCAAAATTGTTTAAACGTTGATTGATTTTGTGTTGGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR GCA 90 bp | AGCCTCCCAGGGAGCTCGGTGTGGCCTCTGGATCACTTCACTTGGGAGGGGCGTGGCGGCCGCAGGGCGTaGGACAGAGCTGGCGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPGSSVWPLDHFTWEGRGGRRA*DRAGGS Trigger: GCTTCCGCCAGCTCTGTCGCACGCCCTGCGGCCGCC...ACGCCCCTCCCAAGTGAAGTGATCCAGAGGCCACACCGAGCTCCCTGGGAGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTCCCAGGGAGCTCGGTGTGGCCTCTGGATCACTTCACTTGGGAGGGGCGTGCGACCCCGACGCATTaGCGCCCGCGCTGGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPGSSVWPLDHFTWEGRATPTH*RPRWGR Trigger: CCTTCCCCAGCGCGGGCGCCAATGCGTCGGGGTCGC...ACGCCCCTCCCAAGTGAAGTGATCCAGAGGCCACACCGAGCTCCCTGGGAGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTCCCAGGGAGCTCGGTGTGGCCTCTGGATCACTTCACTTGGGAGGGGCGTGTGGGTCGCGCCGATTaGTGTCCACCAGCGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLPGSSVWPLDHFTWEGRVGRAD*CPPASR Trigger: TCTGGACGCTGGTGGACATCAATCGGCGCGACCCAC...ACGCCCCTCCCAAGTGAAGTGATCCAGAGGCCACACCGAGCTCCCTGGGAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGGCCACAGTCCTTGCAAGGACACACAGCACTAAGTCCCGTGACACCTGCTCCAGCACCATGCGCGTaGTGCGCCGCAGGCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRPQSLQGHTALSPVTPAPAPCA*CAAGCG Trigger: ACCGCAGCCTGCGGCGCATCACGCGCATGGTGCTGG...AGCAGGTGTCACGGGACTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCACTGTCCACAGCCCCACAGGGATACAGGGCTGCGGGTTCTCTTCAAACCGCCCAGAAGCCCCACTaGGCACACAGCCGAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CPLSTAPQGYRAAGSLQTAQKPH*AHSRVE Trigger: CTCTACTCGGCTGTGTGCGCAGTGGGGCTTCTGGGC...GGTTTGAAGAGAACCCGCAGCCCTGTATCCCTGTGGGGCTGTGGACAGTGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGCCACAGTCCTTGCAAGGACACACAGCACTAAGTCCCGTGACACCTGCTCATTGGCGCCCGCGCTaGGGAAGGCGCTGGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRPQSLQGHTALSPVTPAHWRPR*GRRWER Trigger: CCTTTCCCAGCGCCTTCCCCAGCGCGGGCGCCAATG...AGCAGGTGTCACGGGACTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR TCA 90 bp | CTGACCTCCTCATGTGCACAGTGGCGGGAGCATGCCCCATCCAACACAAAATCACCGAGTAGAGCGCGGTaGTGGCGATGGCTAGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LTSSCAQWREHAPSNTKSPSRAR*WRWLGR Trigger: TCGCCCTAGCCATCGCCATCACCGCGCTCTACTCGG...TGATTTTGTGTTGGATGGGGCATGCTCCCGCCACTGTGCACATGAGGAGGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCACTGTCCACAGCCCCACAGGGATACAGGGCTGCGGGTTCTCTTCAAACCAATGCACAGGTGCAGTaGGGCCACCACAAGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CPLSTAPQGYRAAGSLQTNAQVQ*GHHKWV Trigger: GACCCACTTGTGGTGGCCGCACTGCACCTGTGCATT...GGTTTGAAGAGAACCCGCAGCCCTGTATCCCTGTGGGGCTGTGGACAGTGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR CCA 90 bp | CTGACCTCCTCATGTGCACAGTGGCGGGAGCATGCCCCATCCAACACAAAATCAGGAAGGGCAGCGTGCTaGTGGCCAGCGCATCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSSCAQWREHAPSNTKSGRAAC*WPAHQP Trigger: TGGCTGATGCGCTGGCCACCAGCACGCTGCCCTTCC...TGATTTTGTGTTGGATGGGGCATGCTCCCGCCACTGTGCACATGAGGAGGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCACTGTCCACAGCCCCACAGGGATACAGGGCTGCGGGTTCTCTTCAAACCAAGTACTTGGCGCTCTaGAAGGGCAGCGTGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CPLSTAPQGYRAAGSLQTKYLAL*KGSVLV Trigger: CACCAGCACGCTGCCCTTCCAGAGCGCCAAGTACTT...GGTTTGAAGAGAACCCGCAGCCCTGTATCCCTGTGGGGCTGTGGACAGTGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR CCA 90 bp | CCGCCTCCCGGAAGGCAGTTAGGTCCCTGCTGGAGTGACAGCCTGCAGCTTTTGCTGGGACTGGGGAACTaGAGCATGCATACCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPPGRQLGPCWSDSLQLLLGLGN*SMHTTA Trigger: TGCAGTGGTATGCATGCTCCAGTTCCCCAGTCCCAG...CAAAAGCTGCAGGCTGTCACTCCAGCAGGGACCTAACTGCCTTCCGGGAGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCCTGGGTGGGGCACAAGGCCACAGTCCTTGCAAGGACACACAGCACTAAGTGCGGTCCTTCTCCTTaGAACCGGACAGCAGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPWVGHKATVLARTHSTKCGPSP*NRTADA Trigger: TGCGTCTGCTGTCCGGTTCCAAGGAGAAGGACCGCA...CTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGTGCCCCACCCAGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR CCA 90 bp | TGGATACAGTTTAGGAATCACCAGCTCTGCTTCCTCACCCCCACCGTTCCAACCAGACTGCCGGGTTCTTaGCGGCCGCAGGGCGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: WIQFRNHQLCFLTPTVPTRLPGS*RPQGVR Trigger: TCGCACGCCCTGCGGCCGCCAAGAACCCGGCAGTCT...GGTTGGAACGGTGGGGGTGAGGAAGCAGAGCTGGTGATTCCTAAACTGTATCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR CCA 90 bp | TGGATACAGTTTAGGAATCACCAGCTCTGCTTCCTCACCCCCACCGTTCCAACCCGCTGGGGAAGGCGCTaGGAAAGGCGTCCGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WIQFRNHQLCFLTPTVPTRWGRR*ERRPRG Trigger: ACCTCTCGGACGCCTTTCCCAGCGCCTTCCCCAGCG...GGTTGGAACGGTGGGGGTGAGGAAGCAGAGCTGGTGATTCCTAAACTGTATCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGCCACAGTCCTTGCAAGGACACACAGCACTAAGTCCCGTGACACCTGCTAGGGCAGCGTGCTGGTaGCCAGCGCATCAGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TRPQSLQGHTALSPVTPARAACW*PAHQPK Trigger: CTTTGGCTGATGCGCTGGCCACCAGCACGCTGCCCT...AGCAGGTGTCACGGGACTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR CCA 90 bp | TGGATACAGTTTAGGAATCACCAGCTCTGCTTCCTCACCCCCACCGTTCCAACCGGCGTGCGACAGAGCTaGCGGAAGCAGCGCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WIQFRNHQLCFLTPTVPTGVRQS*RKQRLK Trigger: CTTCAAGCGCTGCTTCCGCCAGCTCTGTCGCACGCC...GGTTGGAACGGTGGGGGTGAGGAAGCAGAGCTGGTGATTCCTAAACTGTATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR GCA 90 bp | CTGACCTCCTCATGTGCACAGTGGCGGGAGCATGCCCCATCCAACACAAAATCATGGAGAGCACAGCCTTaGACAGCAGCTCGCCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: LTSSCAQWREHAPSNTKSWRAQP*TAARQT Trigger: CGTTTGGCGAGCTGCTGTGCAAGGCTGTGCTCTCCA...TGATTTTGTGTTGGATGGGGCATGCTCCCGCCACTGTGCACATGAGGAGGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR GCA 90 bp | ACACTAAATTGCCCAGGCTGTTGGTCCTTAATTTTCCAGCCTCAGCCTCCACTACGTAGCCCAGCGCAATaGACAGGTGCAGTGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLNCPGCWSLIFQPQPPLRSPAQ*TGAVRP Trigger: TGGCCGCACTGCACCTGTGCATTGCGCTGGGCTACG...TAGTGGAGGCTGAGGCTGGAAAATTAAGGACCAACAGCCTGGGCAATTTAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR TCA 90 bp | ACACTAAATTGCCCAGGCTGTTGGTCCTTAATTTTCCAGCCTCAGCCTCCACTAGGCGGAAGCAGCGCTTaGAGTTCTCGTCCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLNCPGCWSLIFQPQPPLGGSSA*SSRPGR Trigger: CCTTCCTGGACGAGAACTTCAAGCGCTGCTTCCGCC...TAGTGGAGGCTGAGGCTGGAAAATTAAGGACCAACAGCCTGGGCAATTTAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR CCA 90 bp | ACAAATGCTGGGACTCTCAGCCAAACCAAATCATCGACCCCATCACTGCCCCTCAGTACCAGCTGGGACTaGGGAACTGGAGCATGCATA | + |
|
Preference number: 4 (lower is better) Translates to: TNAGTLSQTKSSTPSLPLSTSWD*GTGACI Trigger: TATGCATGCTCCAGTTCCCCAGTCCCAGCTGGTACT...GAGGGGCAGTGATGGGGTCGATGATTTGGTTTGGCTGAGAGTCCCAGCATTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR TCA 90 bp | TGGATACAGTTTAGGAATCACCAGCTCTGCTTCCTCACCCCCACCGTTCCAACCCCCAGATGCATATATTaGTCAGCTTGGCCTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WIQFRNHQLCFLTPTVPTPRCIY*SAWPWL Trigger: CAGCCAAGGCCAAGCTGATCAATATATGCATCTGGG...GGTTGGAACGGTGGGGGTGAGGAAGCAGAGCTGGTGATTCCTAAACTGTATCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR CAA 72 bp | CATGTCTGGTGCCCACAGTTGTTGGAAAGCATTAGATaGACTGCGACTGGGGTTACAGATGGCTGTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HVWCPQLLESIR*TATGVTDGCEP Trigger: TGGCTCACAGCCATCTGTAACCCCAGTCGCAGTCAATCTAATGCTTTCCAACAACTGTGGGCACCAGACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR TCA 90 bp | ATGTATGTGTACCATGTTCATGTCTGGTGCCCACAGTTGTTGGAAAGCATTAGACCAGCGTCCAGACGATaGCGAAGATGTGGATGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MYVYHVHVWCPQLLESIRPASRR*RRCGWA Trigger: CGCCCATCCACATCTTCGTCATCGTCTGGACGCTGG...TCTAATGCTTTCCAACAACTGTGGGCACCAGACATGAACATGGTACACATACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR CCA 90 bp | CACAAACACCCTACCACTGAGCTACATTCCCAGCCCTCTTTACATTTTATTTTGGCACCATCCCGGGGTTaGGTCACTGCCATGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: HKHPTTELHSQPSLHFILAPSRG*VTAMTM Trigger: CATGGTCATGGCAGTGACCCAACCCCGGGATGGTGC...CAAAATAAAATGTAAAGAGGGCTGGGAATGTAGCTCAGTGGTAGGGTGTTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| 3UTR CAA 72 bp | ATCACTCAGCCACCTTTCTGGTTCTACTCCCACTTCTaGACACAAAGGCTTACTCGGTTTCAGGGGTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ITQPPFWFYSHF*TQRLTRFQGSL Trigger: AAGGGACCCCTGAAACCGAGTAAGCCTTTGTGTCAAGAAGTGGGAGTAGAACCAGAAAGGTGGCTGAGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR TCA 90 bp | ATGTATGTGTACCATGTTCATGTCTGGTGCCCACAGTTGTTGGAAAGCATTAGAGGACGATGCCAAACATaGCGAGCACGTTGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MYVYHVHVWCPQLLESIRGRCQT*RARCPE Trigger: TTCTGGGCAACGTGCTCGTCATGTTTGGCATCGTCC...TCTAATGCTTTCCAACAACTGTGGGCACCAGACATGAACATGGTACACATACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR GCA 90 bp | ATAATTTCTTTTAATTGGGGTTGGTGGATAAAGGTCCTTTCTGTCAAACCTGCTCCGGGGTTGGGTCACTaGCATGACCATGATGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IISFNWGWWIKVLSVKPAPGLGH*HDHDGD Trigger: GTCCCCATCATGGTCATGGCAGTGACCCAACCCCGG...AGCAGGTTTGACAGAAAGGACCTTTATCCACCAACCCCAATTAAAAGAAATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS-3UTR CCA 90 bp | ATAATTTCTTTTAATTGGGGTTGGTGGATAAAGGTCCTTTCTGTCAAACCTGCTGGAACACGCAGATCTTaGTCACAGTGTCCCAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: IISFNWGWWIKVLSVKPAGTRRS*SQCPST Trigger: GGTACTGGGACACTGTGACCAAGATCTGCGTGTTCC...AGCAGGTTTGACAGAAAGGACCTTTATCCACCAACCCCAATTAAAAGAAATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS TCA 90 bp | AGGCGGCAGCGCCACCGCCCGGGCCGTCGGAGGGGGTGCAGGCAGTaGCACGCTCACGCGTGGTGGCCTGGCGGGGACGACGGAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRQRHRPGRRRGCRQ*HAHAWWPGGDDGDC Trigger: GCAGTCTCCGTCGTCCCCGCCAGGCCACCACGCGTGAGCGTGTCACTGCCTGCACCCCCTCCGACGGCCCGGGCGGTGGCGCTGCCGCCT 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS CCA 90 bp | GGGCGAGGGACGAGGCACTACGGGCTCCCGGCGACCCCGACGCATTaGCGCCCGCGCTGGGGAAGGCGCTGGGAAAGGCGTCCGAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRGTRHYGLPATPTH*RPRWGRRWERRPRG Trigger: ACCTCTCGGACGCCTTTCCCAGCGCCTTCCCCAGCGCGGGCGCCAATGCGTCGGGGTCGCCGGGAGCCCGTAGTGCCTCGTCCCTCGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
||
| CDS CCA 90 bp | CCGTCGGAGGGGGTGCAGGCAGTGACACGCTCACGCGTGGTGGCCTaGCGGGGACGACGGAGACTGCCGGGTTCTTGGCGGCCGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSEGVQAVTRSRVVA*RGRRRLPGSWRPQG Trigger: GCCCTGCGGCCGCCAAGAACCCGGCAGTCTCCGTCGTCCCCGCCAGGCCACCACGCGTGAGCGTGTCACTGCCTGCACCCCCTCCGACGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS TCA 90 bp | TGGCGCCCGCGCTGGGGAAGGCGCTGGGAAAGGCGTCCGAGAGGTTaGCGAGGGGCGAGGACTGCAGCTCCGCACGGGCAGAGGGCACCA | + |
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Preference number: 5 (lower is better) Translates to: WRPRWGRRWERRPRG*RGARTAAPHGQRAP Trigger: TGGTGCCCTCTGCCCGTGCGGAGCTGCAGTCCTCGCCCCTCGTCAACCTCTCGGACGCCTTTCCCAGCGCCTTCCCCAGCGCGGGCGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CCA 90 bp | TCACGCGTGGTGGCCTGGCGGGGACGACGGAGACTGCCGGGTTCTTaGCGGCCGCAGGGCGTGCGACAGAGCTGGCGGAAGCAGCGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SRVVAWRGRRRLPGS*RPQGVRQSWRKQRL Trigger: CAAGCGCTGCTTCCGCCAGCTCTGTCGCACGCCCTGCGGCCGCCAAGAACCCGGCAGTCTCCGTCGTCCCCGCCAGGCCACCACGCGTGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS-3UTR CAA 90 bp | AGCCTCCCAGGGAGCTCGGTGTGGCCTCTGGATCACTTCACTTGGGAGGGGCGTGGCGACCCCGACGCATaGGCGCCCGCGCTGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: SLPGSSVWPLDHFTWEGRGDPDA*APALGK Trigger: CTTCCCCAGCGCGGGCGCCAATGCGTCGGGGTCGCC...ACGCCCCTCCCAAGTGAAGTGATCCAGAGGCCACACCGAGCTCCCTGGGAGGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CCA 90 bp | GGCGTAGCCCAGCGCAATGCACAGGTGCAGTGCGGCCACCACAAGTaGGTCGCGCCGATTGATGTCCACCAGCGTCCAGACGATGACGAA | + |
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Preference number: 5 (lower is better) Translates to: GVAQRNAQVQCGHHK*VAPIDVHQRPDDDE Trigger: TTCGTCATCGTCTGGACGCTGGTGGACATCAATCGGCGCGACCCACTTGTGGTGGCCGCACTGCACCTGTGCATTGCGCTGGGCTACGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCTGGGTGGGGCACAAGGCCACAGTCCTTGCAAGGACACACAGCACTAAGCTGCGGTCCTTCTCCTaGGAACCGGACAGCAGACGC | + |
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Preference number: 5 (lower is better) Translates to: LPWVGHKATVLARTHSTKLRSFS*EPDSRR Trigger: GCGTCTGCTGTCCGGTTCCAAGGAGAAGGACCGCAG...CTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGTGCCCCACCCAGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCTGGGTGGGGCACAAGGCCACAGTCCTTGCAAGGACACACAGCACTAAGAGTGGGTCGCGCCGATaGATGTCCACCAGCGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LPWVGHKATVLARTHSTKSGSRR*MSTSVQ Trigger: CTGGACGCTGGTGGACATCAATCGGCGCGACCCACT...CTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGTGCCCCACCCAGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CCA 90 bp | CAGATCTTGGTCACAGTGTCCCAGTACCAGCTGGGACTGGGGAACTaGAGCATGCATACCACTGCACCATCCCGGGGTTGGGTCACTGCC | + |
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Preference number: 5 (lower is better) Translates to: QILVTVSQYQLGLGN*SMHTTAPSRGWVTA Trigger: GGCAGTGACCCAACCCCGGGATGGTGCAGTGGTATGCATGCTCCAGTTCCCCAGTCCCAGCTGGTACTGGGACACTGTGACCAAGATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CCA 90 bp | GGAACACGCAGATCTTGGTCACAGTGTCCCAGTACCAGCTGGGACTaGGGAACTGGAGCATGCATACCACTGCACCATCCCGGGGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: GTRRSWSQCPSTSWD*GTGACIPLHHPGVG Trigger: CCCAACCCCGGGATGGTGCAGTGGTATGCATGCTCCAGTTCCCCAGTCCCAGCTGGTACTGGGACACTGTGACCAAGATCTGCGTGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS-3UTR CAA 90 bp | AGCCTCCCAGGGAGCTCGGTGTGGCCTCTGGATCACTTCACTTGGGAGGGGCGTCATATATTGATCAGCTaGGCCTTGGCTGGTGTCCGG | + |
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Preference number: 5 (lower is better) Translates to: SLPGSSVWPLDHFTWEGRHILIS*ALAGVR Trigger: CCGGACACCAGCCAAGGCCAAGCTGATCAATATATG...ACGCCCCTCCCAAGTGAAGTGATCCAGAGGCCACACCGAGCTCCCTGGGAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS TCA 90 bp | TGTTGGTGGCGGTCTTCAATTTGGTGTACCGGACGATGCCAAACATaGCGAGCACGTTGCCCAGAAGCCCCACTGCGCACACAGCCGAGT | + |
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Preference number: 5 (lower is better) Translates to: CWWRSSIWCTGRCQT*RARCPEAPLRTQPS Trigger: ACTCGGCTGTGTGCGCAGTGGGGCTTCTGGGCAACGTGCTCGTCATGTTTGGCATCGTCCGGTACACCAAATTGAAGACCGCCACCAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CCA 90 bp | CAAAGAGGAACACGCAGATCTTGGTCACAGTGTCCCAGTACCAGCTaGGACTGGGGAACTGGAGCATGCATACCACTGCACCATCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: QRGTRRSWSQCPSTS*DWGTGACIPLHHPG Trigger: CCCGGGATGGTGCAGTGGTATGCATGCTCCAGTTCCCCAGTCCCAGCTGGTACTGGGACACTGTGACCAAGATCTGCGTGTTCCTCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCTGGGTGGGGCACAAGGCCACAGTCCTTGCAAGGACACACAGCACTAAGAGGAACACGCAGATCTaGGTCACAGTGTCCCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: LPWVGHKATVLARTHSTKRNTQI*VTVSQY Trigger: GTACTGGGACACTGTGACCAAGATCTGCGTGTTCCT...CTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGTGCCCCACCCAGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS-3UTR CAA 90 bp | ACAAGGCCACAGTCCTTGCAAGGACACACAGCACTAAGTCCCGTGACACCTGCTTTGATCAGCTTGGCCTaGGCTGGTGTCCGGAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: TRPQSLQGHTALSPVTPALISLA*AGVRKS Trigger: GGACTTCCGGACACCAGCCAAGGCCAAGCTGATCAA...AGCAGGTGTCACGGGACTTAGTGCTGTGTGTCCTTGCAAGGACTGTGGCCTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS-3UTR CAA 90 bp | ACAAATGCTGGGACTCTCAGCCAAACCAAATCATCGACCCCATCACTGCCCCTCTGGCGGAAGCAGCGCTaGAAGTTCTCGTCCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: TNAGTLSQTKSSTPSLPLWRKQR*KFSSRK Trigger: CTTCCTGGACGAGAACTTCAAGCGCTGCTTCCGCCA...GAGGGGCAGTGATGGGGTCGATGATTTGGTTTGGCTGAGAGTCCCAGCATTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS-3UTR CAA 90 bp | CACAAACACCCTACCACTGAGCTACATTCCCAGCCCTCTTTACATTTTATTTTGGAGACTGCCGGGTTCTaGGCGGCCGCAGGGCGTGCG | + |
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Preference number: 5 (lower is better) Translates to: HKHPTTELHSQPSLHFILETAGF*AAAGRA Trigger: CGCACGCCCTGCGGCCGCCAAGAACCCGGCAGTCTC...CAAAATAAAATGTAAAGAGGGCTGGGAATGTAGCTCAGTGGTAGGGTGTTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS-3UTR CAA 90 bp | ACACTAAATTGCCCAGGCTGTTGGTCCTTAATTTTCCAGCCTCAGCCTCCACTAACCCAGATGCATATATaGATCAGCTTGGCCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: TLNCPGCWSLIFQPQPPLTQMHI*ISLALA Trigger: AGCCAAGGCCAAGCTGATCAATATATGCATCTGGGT...TAGTGGAGGCTGAGGCTGGAAAATTAAGGACCAACAGCCTGGGCAATTTAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS-3UTR CAA 90 bp | ATAATTTCTTTTAATTGGGGTTGGTGGATAAAGGTCCTTTCTGTCAAACCTGCTTGCACCATCCCGGGGTaGGGTCACTGCCATGACCAT | + |
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Preference number: 5 (lower is better) Translates to: IISFNWGWWIKVLSVKPACTIPG*GHCHDH Trigger: ATGGTCATGGCAGTGACCCAACCCCGGGATGGTGCA...AGCAGGTTTGACAGAAAGGACCTTTATCCACCAACCCCAATTAAAAGAAATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CAA 90 bp | AGGGCGAGGGACGAGGCACTACGGGCTCCCGGCGACCCCGACGCATaGGCGCCCGCGCTGGGGAAGGCGCTGGGAAAGGCGTCCGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: RARDEALRAPGDPDA*APALGKALGKASER Trigger: CCTCTCGGACGCCTTTCCCAGCGCCTTCCCCAGCGCGGGCGCCAATGCGTCGGGGTCGCCGGGAGCCCGTAGTGCCTCGTCCCTCGCCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS GCA 72 bp | GCTCACGCGTGGTGGCCTGGCGGGGACGACGGAGACTaGCGGGTTCTTGGCGGCCGCAGGGCGTGCGACAGA | + |
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Preference number: 6 (lower is better) Translates to: AHAWWPGGDDGD*RVLGGRRACDR Trigger: TCTGTCGCACGCCCTGCGGCCGCCAAGAACCCGGCAGTCTCCGTCGTCCCCGCCAGGCCACCACGCGTGAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CCA 72 bp | ACGAGGCACTACGGGCTCCCGGCGACCCCGACGCATTaGCGCCCGCGCTGGGGAAGGCGCTGGGAAAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: TRHYGLPATPTH*RPRWGRRWERR Trigger: ACGCCTTTCCCAGCGCCTTCCCCAGCGCGGGCGCCAATGCGTCGGGGTCGCCGGGAGCCCGTAGTGCCTCGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CCA 72 bp | GTGGCCTGGCGGGGACGACGGAGACTGCCGGGTTCTTaGCGGCCGCAGGGCGTGCGACAGAGCTGGCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: VAWRGRRRLPGS*RPQGVRQSWRK Trigger: CTTCCGCCAGCTCTGTCGCACGCCCTGCGGCCGCCAAGAACCCGGCAGTCTCCGTCGTCCCCGCCAGGCCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CAA 72 bp | GGTGGCCTGGCGGGGACGACGGAGACTGCCGGGTTCTaGGCGGCCGCAGGGCGTGCGACAGAGCTGGCGGAA | + |
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Preference number: 6 (lower is better) Translates to: GGLAGTTETAGF*AAAGRATELAE Trigger: TTCCGCCAGCTCTGTCGCACGCCCTGCGGCCGCCAAGAACCCGGCAGTCTCCGTCGTCCCCGCCAGGCCACC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CAA 90 bp | TTGGCGCCCGCGCTGGGGAAGGCGCTGGGAAAGGCGTCCGAGAGGTaGACGAGGGGCGAGGACTGCAGCTCCGCACGGGCAGAGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: LAPALGKALGKASER*TRGEDCSSARAEGT Trigger: GGTGCCCTCTGCCCGTGCGGAGCTGCAGTCCTCGCCCCTCGTCAACCTCTCGGACGCCTTTCCCAGCGCCTTCCCCAGCGCGGGCGCCAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CAA 90 bp | CTCACGCGTGGTGGCCTGGCGGGGACGACGGAGACTGCCGGGTTCTaGGCGGCCGCAGGGCGTGCGACAGAGCTGGCGGAAGCAGCGCTT | + |
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Preference number: 6 (lower is better) Translates to: LTRGGLAGTTETAGF*AAAGRATELAEAAL Trigger: AAGCGCTGCTTCCGCCAGCTCTGTCGCACGCCCTGCGGCCGCCAAGAACCCGGCAGTCTCCGTCGTCCCCGCCAGGCCACCACGCGTGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CCA 72 bp | GGGGTGCAGGCAGTGACACGCTCACGCGTGGTGGCCTaGCGGGGACGACGGAGACTGCCGGGTTCTTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: GVQAVTRSRVVA*RGRRRLPGSWR Trigger: CCGCCAAGAACCCGGCAGTCTCCGTCGTCCCCGCCAGGCCACCACGCGTGAGCGTGTCACTGCCTGCACCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS TCA 72 bp | GAAGCCCCACTGCGCACACAGCCGAGTAGAGCGCGGTaGTGGCGATGGCTAGGGCGAGGGACGAGGCACTAC | + |
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Preference number: 6 (lower is better) Translates to: EAPLRTQPSRAR*WRWLGRGTRHY Trigger: GTAGTGCCTCGTCCCTCGCCCTAGCCATCGCCATCACCGCGCTCTACTCGGCTGTGTGCGCAGTGGGGCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CCA 72 bp | CCAAACGGCCACGTTTCCATCAAGTACTTGGCGCTCTaGAAGGGCAGCGTGCTGGTGGCCAGCGCATCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PNGHVSIKYLAL*KGSVLVASASA Trigger: GGCTGATGCGCTGGCCACCAGCACGCTGCCCTTCCAGAGCGCCAAGTACTTGATGGAAACGTGGCCGTTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CAA 90 bp | GCAATGCACAGGTGCAGTGCGGCCACCACAAGTGGGTCGCGCCGATaGATGTCCACCAGCGTCCAGACGATGACGAAGATGTGGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: AMHRCSAATTSGSRR*MSTSVQTMTKMWMG Trigger: GCCCATCCACATCTTCGTCATCGTCTGGACGCTGGTGGACATCAATCGGCGCGACCCACTTGTGGTGGCCGCACTGCACCTGTGCATTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CAA 72 bp | AGGTGCAGTGCGGCCACCACAAGTGGGTCGCGCCGATaGATGTCCACCAGCGTCCAGACGATGACGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: RCSAATTSGSRR*MSTSVQTMTKM Trigger: CATCTTCGTCATCGTCTGGACGCTGGTGGACATCAATCGGCGCGACCCACTTGTGGTGGCCGCACTGCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS TCA 72 bp | CGGTCTTCAATTTGGTGTACCGGACGATGCCAAACATaGCGAGCACGTTGCCCAGAAGCCCCACTGCGCACA | + |
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Preference number: 6 (lower is better) Translates to: RSSIWCTGRCQT*RARCPEAPLRT Trigger: TGTGCGCAGTGGGGCTTCTGGGCAACGTGCTCGTCATGTTTGGCATCGTCCGGTACACCAAATTGAAGACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CCA 72 bp | AGATCTTGGTCACAGTGTCCCAGTACCAGCTGGGACTaGGGAACTGGAGCATGCATACCACTGCACCATCCC | + |
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Preference number: 6 (lower is better) Translates to: RSWSQCPSTSWD*GTGACIPLHHP Trigger: GGGATGGTGCAGTGGTATGCATGCTCCAGTTCCCCAGTCCCAGCTGGTACTGGGACACTGTGACCAAGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CCA 72 bp | ACACGCAGATCTTGGTCACAGTGTCCCAGTACCAGCTaGGACTGGGGAACTGGAGCATGCATACCACTGCAC | + |
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Preference number: 6 (lower is better) Translates to: TRRSWSQCPSTS*DWGTGACIPLH Trigger: GTGCAGTGGTATGCATGCTCCAGTTCCCCAGTCCCAGCTGGTACTGGGACACTGTGACCAAGATCTGCGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CAA 90 bp | ACCCCGACACCTGAAGCCAAGACCCAGATGCATATATTGATCAGCTaGGCCTTGGCTGGTGTCCGGAAGTCCAGGGCTTTGACAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: TPTPEAKTQMHILIS*ALAGVRKSRALTGW Trigger: CCATCCTGTCAAAGCCCTGGACTTCCGGACACCAGCCAAGGCCAAGCTGATCAATATATGCATCTGGGTCTTGGCTTCAGGTGTCGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CAA 90 bp | ATGATGGGGACCCCGACACCTGAAGCCAAGACCCAGATGCATATATaGATCAGCTTGGCCTTGGCTGGTGTCCGGAAGTCCAGGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: MMGTPTPEAKTQMHI*ISLALAGVRKSRAL Trigger: CAAAGCCCTGGACTTCCGGACACCAGCCAAGGCCAAGCTGATCAATATATGCATCTGGGTCTTGGCTTCAGGTGTCGGGGTCCCCATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS TCA 72 bp | CCCCGACACCTGAAGCCAAGACCCAGATGCATATATTaGTCAGCTTGGCCTTGGCTGGTGTCCGGAAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PRHLKPRPRCIY*SAWPWLVSGSP Trigger: TGGACTTCCGGACACCAGCCAAGGCCAAGCTGATCAATATATGCATCTGGGTCTTGGCTTCAGGTGTCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CAA 72 bp | GCCAAGACCCAGATGCATATATTGATCAGCTTGGCCTaGGCTGGTGTCCGGAAGTCCAGGGCTTTGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: AKTQMHILISLA*AGVRKSRALTG Trigger: TCCTGTCAAAGCCCTGGACTTCCGGACACCAGCCAAGGCCAAGCTGATCAATATATGCATCTGGGTCTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CAA 72 bp | CCTGAAGCCAAGACCCAGATGCATATATTGATCAGCTaGGCCTTGGCTGGTGTCCGGAAGTCCAGGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: PEAKTQMHILIS*ALAGVRKSRAL Trigger: CAAAGCCCTGGACTTCCGGACACCAGCCAAGGCCAAGCTGATCAATATATGCATCTGGGTCTTGGCTTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS CAA 90 bp | ACACCTGAAGCCAAGACCCAGATGCATATATTGATCAGCTTGGCCTaGGCTGGTGTCCGGAAGTCCAGGGCTTTGACAGGATGGCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: TPEAKTQMHILISLA*AGVRKSRALTGWQT Trigger: TGTCTGCCATCCTGTCAAAGCCCTGGACTTCCGGACACCAGCCAAGGCCAAGCTGATCAATATATGCATCTGGGTCTTGGCTTCAGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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| CDS TCA 72 bp | GGTCACTGCCATGACCATGATGGGGACCCCGACACCTaGAGCCAAGACCCAGATGCATATATTGATCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GHCHDHDGDPDT*SQDPDAYIDQL Trigger: AAGCTGATCAATATATGCATCTGGGTCTTGGCTTCAGGTGTCGGGGTCCCCATCATGGTCATGGCAGTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056336.2 |
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