Pregenerated sensors for OPN5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043972Ensembl transcript IDs: ENSMUST00000068355.8
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTTTCAGCATTTCAAAGAGTATATTGAAGCTGGCCACTTATTTCTaGAGCCCTGATGGACAGGTGCGGGGTTTCTCGGCCTCAGAACAC | + |
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Preference number: 1 (lower is better) Translates to: FFSISKSILKLATYF*SPDGQVRGFSASEH Trigger: GTGTTCTGAGGCCGAGAAACCCCGCACCTGTCCATCAGGGCTTCAGAAATAAGTGGCCAGCTTCAATATACTCTTTGAAATGCTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| 3UTR CCA 90 bp | TTTCCTAGTACAGTCAACAAACTGTTCTTCAGTTCGACACACAACTaGGACAAAGTGAATGAGTCAAACACTAAAACATCTTCTGAATGT | + |
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Preference number: 1 (lower is better) Translates to: FPSTVNKLFFSSTHN*DKVNESNTKTSSEC Trigger: ACATTCAGAAGATGTTTTAGTGTTTGACTCATTCACTTTGTCCCAGTTGTGTGTCGAACTGAAGAACAGTTTGTTGACTGTACTAGGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGTGTGCAAAGAGAGATGGACAGAGATGAAAAGTACTAATGCATTCTTTCCTCTGGCCACTTATTTCTaGAGCCCTGATGGACAGGTG | + |
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Preference number: 2 (lower is better) Translates to: SVCKERWTEMKSTNAFFPLATYF*SPDGQV Trigger: CACCTGTCCATCAGGGCTTCAGAAATAAGTGGCCAG...AGGAAAGAATGCATTAGTACTTTTCATCTCTGTCCATCTCTCTTTGCACACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTTCTCCTTAGAACACTTTAATCGTCTTATAAAGCCTAAAGAGTGGACACTTTTATTTCTGAAGCCCTaGTGGACAGGTGCGGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: AFSLEHFNRLIKPKEWTLLFLKP*WTGAGF Trigger: AAACCCCGCACCTGTCCATCAGGGCTTCAGAAATAA...AAGTGTCCACTCTTTAGGCTTTATAAGACGATTAAAGTGTTCTAAGGAGAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCATTCTTTCCTAGTACAGTCAACAAACTGTTCTTCAGTTCGACACACAACTCACTGCAGTCAACGCTaGCCATATGTTTTCTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: MHSFLVQSTNCSSVRHTTHCSQR*PYVFSN Trigger: GTTTGAGAAAACATATGGTCAGCGTTGACTGCAGTG...AGTTGTGTGTCGAACTGAAGAACAGTTTGTTGACTGTACTAGGAAAGAATGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGACAGTTTCAAAGGCATGTTCACAGTCATGAATGCATCGATAAGCTCCATTCCCAAGCTTAGGATGTaGTTTCTCCTTAGAACACTT | + |
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Preference number: 2 (lower is better) Translates to: VDSFKGMFTVMNASISSIPKLRM*FLLRTL Trigger: AAGTGTTCTAAGGAGAAAGCACATCCTAAGCTTGGG...AATGGAGCTTATCGATGCATTCATGACTGTGAACATGCCTTTGAAACTGTCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| 3UTR TCA 72 bp | GAGTATATTGAAGCTGGCCACTTATTTCTGAAGCCCTaGTGGACAGGTGCGGGGTTTCTCGGCCTCAGAACA | + |
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Preference number: 3 (lower is better) Translates to: EYIEAGHLFLKP*WTGAGFLGLRT Trigger: TGTTCTGAGGCCGAGAAACCCCGCACCTGTCCATCAGGGCTTCAGAAATAAGTGGCCAGCTTCAATATACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| 3UTR TCA 72 bp | ATTTCAAAGAGTATATTGAAGCTGGCCACTTATTTCTaGAGCCCTGATGGACAGGTGCGGGGTTTCTCGGCC | + |
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Preference number: 3 (lower is better) Translates to: ISKSILKLATYF*SPDGQVRGFSA Trigger: GGCCGAGAAACCCCGCACCTGTCCATCAGGGCTTCAGAAATAAGTGGCCAGCTTCAATATACTCTTTGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTTCTTCAGTTCGACACACAACTGGGACAAAGTGAATGAGTCAAACACTAAAGTGTACAAGAAGTGGTaGACAGTTTCAAAGGCATGT | + |
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Preference number: 3 (lower is better) Translates to: LFFSSTHNWDKVNESNTKVYKKW*TVSKAC Trigger: ACATGCCTTTGAAACTGTCAACCACTTCTTGTACAC...TTTAGTGTTTGACTCATTCACTTTGTCCCAGTTGTGTGTCGAACTGAAGAACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| 3UTR TCA 72 bp | AACTGTTCTTCAGTTCGACACACAACTGGGACAAAGTaGATGAGTCAAACACTAAAACATCTTCTGAATGTT | + |
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Preference number: 3 (lower is better) Translates to: NCSSVRHTTGTK*MSQTLKHLLNV Trigger: AACATTCAGAAGATGTTTTAGTGTTTGACTCATTCACTTTGTCCCAGTTGTGTGTCGAACTGAAGAACAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| 3UTR TCA 72 bp | AAACTATTTCAGTGTGCAAAGAGAGATGGACAGAGATaGAAAGTACTAATGCATTCTTTCCTAGTACAGTCA | + |
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Preference number: 3 (lower is better) Translates to: KLFQCAKRDGQR*KVLMHSFLVQS Trigger: TGACTGTACTAGGAAAGAATGCATTAGTACTTTTCATCTCTGTCCATCTCTCTTTGCACACTGAAATAGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR TCA 90 bp | AGCTGGCCACTTATTTCTGAAGCCCTGATGGACAGGTGCGGGGTTTCTCGGCCTATTGTACATCGCTGCTaGTTTTGCAAGGAGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SWPLISEALMDRCGVSRPIVHRC*FCKECG Trigger: CCCACACTCCTTGCAAAATCAGCAGCGATGTACAAT...AGGCCGAGAAACCCCGCACCTGTCCATCAGGGCTTCAGAAATAAGTGGCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR TCA 90 bp | AGCTGGCCACTTATTTCTGAAGCCCTGATGGACAGGTGCGGGGTTTCTCGGCCTTCACCATCATTACTGTaGCTCTCTCCATCCATAACA | + |
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Preference number: 4 (lower is better) Translates to: SWPLISEALMDRCGVSRPSPSLL*LSPSIT Trigger: TGTTATGGATGGAGAGAGTCACAGTAATGATGGTGA...AGGCCGAGAAACCCCGCACCTGTCCATCAGGGCTTCAGAAATAAGTGGCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CCA 90 bp | ATGCATTCTTTCCTAGTACAGTCAACAAACTGTTCTTCAGTTCGACACACAACTCCCCCACCTGAAGCCTaGGCCAGCCACCAGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: MHSFLVQSTNCSSVRHTTPPPEA*ASHQSR Trigger: CCTGGACTGGTGGCTGGCCCAGGCTTCAGGTGGGGG...AGTTGTGTGTCGAACTGAAGAACAGTTTGTTGACTGTACTAGGAAAGAATGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR GCA 90 bp | CTGTTCTTCAGTTCGACACACAACTGGGACAAAGTGAATGAGTCAAACACTAAATCCGAAGGGCTCAGGTaGATAGTCCCCCAGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LFFSSTHNWDKVNESNTKSEGLR*IVPQAH Trigger: GTGGGCCTGGGGGACTATGCACCTGAGCCCTTCGGA...TTTAGTGTTTGACTCATTCACTTTGTCCCAGTTGTGTGTCGAACTGAAGAACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR TCA 90 bp | TCAGTGTGCAAAGAGAGATGGACAGAGATGAAAAGTACTAATGCATTCTTTCCTCCAGTCCAGGGTGCATaGGGTTCCGAAGGGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SVCKERWTEMKSTNAFFPPVQGA*GSEGLR Trigger: CCTGAGCCCTTCGGAACCTCATGCACCCTGGACTGG...AGGAAAGAATGCATTAGTACTTTTCATCTCTGTCCATCTCTCTTTGCACACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR GCA 90 bp | CTGTTCTTCAGTTCGACACACAACTGGGACAAAGTGAATGAGTCAAACACTAAAGCCACCAGTCCAGGGTaGATGAGGTTCCGAAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LFFSSTHNWDKVNESNTKATSPG*MRFRRA Trigger: AGCCCTTCGGAACCTCATGCACCCTGGACTGGTGGC...TTTAGTGTTTGACTCATTCACTTTGTCCCAGTTGTGTGTCGAACTGAAGAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR TCA 90 bp | CTGTTCTTCAGTTCGACACACAACTGGGACAAAGTGAATGAGTCAAACACTAAATGGCCTTCCAAAAGCTaGCCACACAGAGACGACCGC | + |
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Preference number: 4 (lower is better) Translates to: LFFSSTHNWDKVNESNTKWPSKS*PHRDDR Trigger: GCGGTCGTCTCTGTGTGGTCAGCTTTTGGAAGGCCA...TTTAGTGTTTGACTCATTCACTTTGTCCCAGTTGTGTGTCGAACTGAAGAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR TCA 90 bp | TTAGGATGTGCTTTCTCCTTAGAACACTTTAATCGTCTTATAAAGCCTAAAGAGGGCAGGCGCTCATCCTaGGGTAGGGCAGTGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LGCAFSLEHFNRLIKPKEGRRSS*GRAVWF Trigger: GAACCACACTGCCCTACCTCAGGATGAGCGCCTGCC...CTCTTTAGGCTTTATAAGACGATTAAAGTGTTCTAAGGAGAAAGCACATCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR TCA 90 bp | CAAGTTGACTTGACAGAGTATGCTGTTAGAAGCTTCCCAGATAAATGTTCAAAACTCAGGATGAACACCTaGCCCCCACCTGAAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QVDLTEYAVRSFPDKCSKLRMNT*PPPEAW Trigger: CCAGGCTTCAGGTGGGGGTCAGGTGTTCATCCTGAG...TTTTGAACATTTATCTGGGAAGCTTCTAACAGCATACTCTGTCAAGTCAACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CCA 90 bp | ATGCATTCTTTCCTAGTACAGTCAACAAACTGTTCTTCAGTTCGACACACAACTCCACGGAGAGCTGTATaGGGATGGAGTCTGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: MHSFLVQSTNCSSVRHTTPRRAV*GWSLAF Trigger: GAAGGCCAGACTCCATCCCCATACAGCTCTCCGTGG...AGTTGTGTGTCGAACTGAAGAACAGTTTGTTGACTGTACTAGGAAAGAATGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR TCA 90 bp | GCTTTCTCCTTAGAACACTTTAATCGTCTTATAAAGCCTAAAGAGTGGACACTTAGAGGATGCTCAGGATaGACACCTGACCCCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: AFSLEHFNRLIKPKEWTLRGCSG*TPDPHL Trigger: CAGGTGGGGGTCAGGTGTTCATCCTGAGCATCCTCT...AAGTGTCCACTCTTTAGGCTTTATAAGACGATTAAAGTGTTCTAAGGAGAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CCA 90 bp | GCTTTCTCCTTAGAACACTTTAATCGTCTTATAAAGCCTAAAGAGTGGACACTTGGCCCACCAAGGGCATaGTGGTCCAGAAGGAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: AFSLEHFNRLIKPKEWTLGPPRA*WSRRKH Trigger: ATGCTTCCTTCTGGACCACCATGCCCTTGGTGGGCC...AAGTGTCCACTCTTTAGGCTTTATAAGACGATTAAAGTGTTCTAAGGAGAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CCA 90 bp | CTGTTCTTCAGTTCGACACACAACTGGGACAAAGTGAATGAGTCAAACACTAAATCTGGAACTGCTCTCTaGATGGATCTCCAGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: LFFSSTHNWDKVNESNTKSGTAL*MDLQHS Trigger: GCTGTGCTGGAGATCCATCCAGAGAGCAGTTCCAGA...TTTAGTGTTTGACTCATTCACTTTGTCCCAGTTGTGTGTCGAACTGAAGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CCA 90 bp | GTTGACAGTTTCAAAGGCATGTTCACAGTCATGAATGCATCGATAAGCTCCATTAGAGCTGTATGGGGATaGAGTCTGGCCTTCCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: VDSFKGMFTVMNASISSIRAVWG*SLAFQK Trigger: CTTTTGGAAGGCCAGACTCCATCCCCATACAGCTCT...AATGGAGCTTATCGATGCATTCATGACTGTGAACATGCCTTTGAAACTGTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CCA 90 bp | CAAGTTGACTTGACAGAGTATGCTGTTAGAAGCTTCCCAGATAAATGTTCAAAACCACCAAGGGCATGGTaGTCCAGAAGGAAGCATAAG | + |
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Preference number: 4 (lower is better) Translates to: QVDLTEYAVRSFPDKCSKPPRAW*SRRKHK Trigger: CTTATGCTTCCTTCTGGACCACCATGCCCTTGGTGG...TTTTGAACATTTATCTGGGAAGCTTCTAACAGCATACTCTGTCAAGTCAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR TCA 90 bp | ACACACAACTGGGACAAAGTGAATGAGTCAAACACTAAAACATCTTCTGAATGTCAGCAGAAGACTTCCTaGCTGCGGTTACAGTATGCA | + |
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Preference number: 4 (lower is better) Translates to: THNWDKVNESNTKTSSECQQKTS*LRLQYA Trigger: TGCATACTGTAACCGCAGTCAGGAAGTCTTCTGCTG...ACATTCAGAAGATGTTTTAGTGTTTGACTCATTCACTTTGTCCCAGTTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CCA 90 bp | CTGTTCTTCAGTTCGACACACAACTGGGACAAAGTGAATGAGTCAAACACTAAAAGTACATGGCTGCTATaGATTCGACTGTCGAAATGG | + |
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Preference number: 4 (lower is better) Translates to: LFFSSTHNWDKVNESNTKSTWLL*IRLSKW Trigger: CCATTTCGACAGTCGAATCCATAGCAGCCATGTACT...TTTAGTGTTTGACTCATTCACTTTGTCCCAGTTGTGTGTCGAACTGAAGAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CCA 90 bp | GTTGACAGTTTCAAAGGCATGTTCACAGTCATGAATGCATCGATAAGCTCCATTTTCACCTCAAGTACATaGCTGCTATGGATTCGACTG | + |
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Preference number: 4 (lower is better) Translates to: VDSFKGMFTVMNASISSIFTSST*LLWIRL Trigger: CAGTCGAATCCATAGCAGCCATGTACTTGAGGTGAA...AATGGAGCTTATCGATGCATTCATGACTGTGAACATGCCTTTGAAACTGTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR GCA 90 bp | ACACACAACTGGGACAAAGTGAATGAGTCAAACACTAAAACATCTTCTGAATGTAGAAGACTTCCTGACTaGGGTTACAGTATGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: THNWDKVNESNTKTSSECRRLPD*GYSMQP Trigger: AGGCTGCATACTGTAACCGCAGTCAGGAAGTCTTCT...ACATTCAGAAGATGTTTTAGTGTTTGACTCATTCACTTTGTCCCAGTTGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CCA 90 bp | ACACACAACTGGGACAAAGTGAATGAGTCAAACACTAAAACATCTTCTGAATGTCTTCCCAGGAAAGTTTaGAAGCAAAAGGGTCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: THNWDKVNESNTKTSSECLPRKV*KQKGPR Trigger: ACGAGGACCCTTTTGCTTCCAAACTTTCCTGGGAAG...ACATTCAGAAGATGTTTTAGTGTTTGACTCATTCACTTTGTCCCAGTTGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CCA 90 bp | CAAGTTGACTTGACAGAGTATGCTGTTAGAAGCTTCCCAGATAAATGTTCAAAATCAGCATTGCCACCTTaGTCAGCTTCACCTCAAGTA | + |
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Preference number: 4 (lower is better) Translates to: QVDLTEYAVRSFPDKCSKSALPP*SASPQV Trigger: TACTTGAGGTGAAGCTGACCAAGGTGGCAATGCTGA...TTTTGAACATTTATCTGGGAAGCTTCTAACAGCATACTCTGTCAAGTCAACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CCA 90 bp | TTAGGATGTGCTTTCTCCTTAGAACACTTTAATCGTCTTATAAAGCCTAAAGAGGAACTGCTCTCTGGATaGATCTCCAGCACAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LGCAFSLEHFNRLIKPKEELLSG*ISSTAE Trigger: TTCTGCTGTGCTGGAGATCCATCCAGAGAGCAGTTC...CTCTTTAGGCTTTATAAGACGATTAAAGTGTTCTAAGGAGAAAGCACATCCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR TCA 90 bp | CTGTTCTTCAGTTCGACACACAACTGGGACAAAGTGAATGAGTCAAACACTAAAGATGATCTTAGCATATaGGAAAACAATCACAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: LFFSSTHNWDKVNESNTKDDLSI*ENNHSR Trigger: ACGGCTGTGATTGTTTTCTCATATGCTAAGATCATC...TTTAGTGTTTGACTCATTCACTTTGTCCCAGTTGTGTGTCGAACTGAAGAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR GCA 90 bp | CAAGTTGACTTGACAGAGTATGCTGTTAGAAGCTTCCCAGATAAATGTTCAAAAACTGCGGTTACAGTATaGAGCCTAAAGTCTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: QVDLTEYAVRSFPDKCSKTAVTV*SLKSSK Trigger: TTTGGAAGACTTTAGGCTGCATACTGTAACCGCAGT...TTTTGAACATTTATCTGGGAAGCTTCTAACAGCATACTCTGTCAAGTCAACTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CCA 90 bp | TCAGTGTGCAAAGAGAGATGGACAGAGATGAAAAGTACTAATGCATTCTTTCCTATTCGACTGTCGAAATaGGCTACCTCTTTAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SVCKERWTEMKSTNAFFPIRLSK*ATSLEE Trigger: TTCTTCTAAAGAGGTAGCCCATTTCGACAGTCGAAT...AGGAAAGAATGCATTAGTACTTTTCATCTCTGTCCATCTCTCTTTGCACACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CCA 90 bp | ATGCATTCTTTCCTAGTACAGTCAACAAACTGTTCTTCAGTTCGACACACAACTTCTCCATCCATAACATaGGCACTAGTAAATCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: MHSFLVQSTNCSSVRHTTSPSIT*ALVNLE Trigger: TTCCAGATTTACTAGTGCCCATGTTATGGATGGAGA...AGTTGTGTGTCGAACTGAAGAACAGTTTGTTGACTGTACTAGGAAAGAATGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CCA 90 bp | GCCCAGCCATACCAGCGGCAGCCAAACCAGCCAAACACCCAGCGGTaGCAGAAGCAAGAGATGATGGTGAACGGCTTGCCTACAACTGAT | + |
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Preference number: 5 (lower is better) Translates to: AQPYQRQPNQPNTQR*QKQEMMVNGLPTTD Trigger: ATCAGTTGTAGGCAAGCCGTTCACCATCATCTCTTGCTTCTGCCACCGCTGGGTGTTTGGCTGGTTTGGCTGCCGCTGGTATGGCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CCA 90 bp | TCGCTGCTGATTTTGCAAGGAGTGTGGGCACCACGGAGAGCTGTATaGGGATGGAGTCTGGCCTTCCAAAAGCTGACCACACAGAGACGA | + |
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Preference number: 5 (lower is better) Translates to: SLLILQGVWAPRRAV*GWSLAFQKLTTQRR Trigger: TCGTCTCTGTGTGGTCAGCTTTTGGAAGGCCAGACTCCATCCCCATACAGCTCTCCGTGGTGCCCACACTCCTTGCAAAATCAGCAGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CAA 90 bp | AGCTGGCCACTTATTTCTGAAGCCCTGATGGACAGGTGCGGGGTTTCTCGGCCTGCTTCCCAGGAAAGTTaGGAAGCAAAAGGGTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: SWPLISEALMDRCGVSRPASQES*EAKGSS Trigger: CGAGGACCCTTTTGCTTCCAAACTTTCCTGGGAAGC...AGGCCGAGAAACCCCGCACCTGTCCATCAGGGCTTCAGAAATAAGTGGCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS TCA 90 bp | CACCACGGAGAGCTGTATGGGGATGGAGTCTGGCCTTCCAAAAGCTaGCCACACAGAGACGACCGCATAAGGAATCCAGGCAATCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: HHGELYGDGVWPSKS*PHRDDRIRNPGNQE Trigger: TTCCTGATTGCCTGGATTCCTTATGCGGTCGTCTCTGTGTGGTCAGCTTTTGGAAGGCCAGACTCCATCCCCATACAGCTCTCCGTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS GCA 90 bp | CACCAAGGGCATGGTGGTCCAGAAGGAAGCATAAGCCCAGATGACTaGCAGGCAGATGTAGGCATGCTTTCTCTTCAGCCAGACCCCATA | + |
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Preference number: 5 (lower is better) Translates to: HQGHGGPEGSISPDD*QADVGMLSLQPDPI Trigger: TATGGGGTCTGGCTGAAGAGAAAGCATGCCTACATCTGCCTGGCAGTCATCTGGGCTTATGCTTCCTTCTGGACCACCATGCCCTTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CAA 90 bp | AGCTGGCCACTTATTTCTGAAGCCCTGATGGACAGGTGCGGGGTTTCTCGGCCTATGATGGTGAACGGCTaGCCTACAACTGATATCCCC | + |
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Preference number: 5 (lower is better) Translates to: SWPLISEALMDRCGVSRPMMVNG*PTTDIP Trigger: GGGGATATCAGTTGTAGGCAAGCCGTTCACCATCAT...AGGCCGAGAAACCCCGCACCTGTCCATCAGGGCTTCAGAAATAAGTGGCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CCA 90 bp | CTCTCCATCCATAACATGGGCACTAGTAAATCTGGAACTGCTCTCTaGATGGATCTCCAGCACAGCAGAAGACTTCCTGACTGCGGTTAC | + |
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Preference number: 5 (lower is better) Translates to: LSIHNMGTSKSGTAL*MDLQHSRRLPDCGY Trigger: GTAACCGCAGTCAGGAAGTCTTCTGCTGTGCTGGAGATCCATCCAGAGAGCAGTTCCAGATTTACTAGTGCCCATGTTATGGATGGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CCA 90 bp | CCATCCATAACATGGGCACTAGTAAATCTGGAACTGCTCTCTGGATaGATCTCCAGCACAGCAGAAGACTTCCTGACTGCGGTTACAGTA | + |
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Preference number: 5 (lower is better) Translates to: PSITWALVNLELLSG*ISSTAEDFLTAVTV Trigger: TACTGTAACCGCAGTCAGGAAGTCTTCTGCTGTGCTGGAGATCCATCCAGAGAGCAGTTCCAGATTTACTAGTGCCCATGTTATGGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS TCA 90 bp | TCTGTAATCAATGACCTGGTAGATGATTGGATTGTACATCGCTGCTaGTTTTGCAAGGAGTGTGGGCACCACGGAGAGCTGTATGGGGAT | + |
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Preference number: 5 (lower is better) Translates to: SVINDLVDDWIVHRC*FCKECGHHGELYGD Trigger: ATCCCCATACAGCTCTCCGTGGTGCCCACACTCCTTGCAAAATCAGCAGCGATGTACAATCCAATCATCTACCAGGTCATTGATTACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CCA 90 bp | AGCATTGCCACCTTGGTCAGCTTCACCTCAAGTACATGGCTGCTATaGATTCGACTGTCGAAATGGGCTACCTCTTTAGAAGAAGACTTC | + |
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Preference number: 5 (lower is better) Translates to: SIATLVSFTSSTWLL*IRLSKWATSLEEDF Trigger: GAAGTCTTCTTCTAAAGAGGTAGCCCATTTCGACAGTCGAATCCATAGCAGCCATGTACTTGAGGTGAAGCTGACCAAGGTGGCAATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CCA 90 bp | GCACAAATCAGCATTGCCACCTTGGTCAGCTTCACCTCAAGTACATaGCTGCTATGGATTCGACTGTCGAAATGGGCTACCTCTTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: AQISIATLVSFTSST*LLWIRLSKWATSLE Trigger: TTCTAAAGAGGTAGCCCATTTCGACAGTCGAATCCATAGCAGCCATGTACTTGAGGTGAAGCTGACCAAGGTGGCAATGCTGATTTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS GCA 90 bp | ACTGCTCTCTGGATGGATCTCCAGCACAGCAGAAGACTTCCTGACTaGGGTTACAGTATGCAGCCTAAAGTCTTCCAAAGATTTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: TALWMDLQHSRRLPD*GYSMQPKVFQRFLL Trigger: AAGAAGAAATCTTTGGAAGACTTTAGGCTGCATACTGTAACCGCAGTCAGGAAGTCTTCTGCTGTGCTGGAGATCCATCCAGAGAGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS GCA 90 bp | TGGATCTCCAGCACAGCAGAAGACTTCCTGACTGCGGTTACAGTATaGAGCCTAAAGTCTTCCAAAGATTTCTTCTTCGTTCCTCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: WISSTAEDFLTAVTV*SLKSSKDFFFVPLK Trigger: TTTGAGAGGAACGAAGAAGAAATCTTTGGAAGACTTTAGGCTGCATACTGTAACCGCAGTCAGGAAGTCTTCTGCTGTGCTGGAGATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CCA 90 bp | AGCTTCACCTCAAGTACATGGCTGCTATGGATTCGACTGTCGAAATaGGCTACCTCTTTAGAAGAAGACTTCACCTTGGCGATGATCTTA | + |
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Preference number: 5 (lower is better) Translates to: SFTSSTWLLWIRLSK*ATSLEEDFTLAMIL Trigger: TAAGATCATCGCCAAGGTGAAGTCTTCTTCTAAAGAGGTAGCCCATTTCGACAGTCGAATCCATAGCAGCCATGTACTTGAGGTGAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CAA 90 bp | GTTGACAGTTTCAAAGGCATGTTCACAGTCATGAATGCATCGATAAGCTCCATTATCAGCATTGCCACCTaGGTCAGCTTCACCTCAAGT | + |
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Preference number: 5 (lower is better) Translates to: VDSFKGMFTVMNASISSIISIAT*VSFTSS Trigger: ACTTGAGGTGAAGCTGACCAAGGTGGCAATGCTGAT...AATGGAGCTTATCGATGCATTCATGACTGTGAACATGCCTTTGAAACTGTCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CAA 90 bp | GCTTTCTCCTTAGAACACTTTAATCGTCTTATAAAGCCTAAAGAGTGGACACTTAAACAATCACAGCCGTaGGCAGCAGGAGGCAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: AFSLEHFNRLIKPKEWTLKQSQP*AAGGRR Trigger: TCTTCTGCCTCCTGCTGCCAACGGCTGTGATTGTTT...AAGTGTCCACTCTTTAGGCTTTATAAGACGATTAAAGTGTTCTAAGGAGAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CAA 90 bp | ACACACAACTGGGACAAAGTGAATGAGTCAAACACTAAAACATCTTCTGAATGTACATCGCTGCTGATTTaGCAAGGAGTGTGGGCACCA | + |
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Preference number: 5 (lower is better) Translates to: THNWDKVNESNTKTSSECTSLLI*QGVWAP Trigger: TGGTGCCCACACTCCTTGCAAAATCAGCAGCGATGT...ACATTCAGAAGATGTTTTAGTGTTTGACTCATTCACTTTGTCCCAGTTGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CAA 90 bp | CAAGTTGACTTGACAGAGTATGCTGTTAGAAGCTTCCCAGATAAATGTTCAAAAAGAGAATCCCGATTATaGTTAGGTAAAAGCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: QVDLTEYAVRSFPDKCSKRESRL*LGKSQP Trigger: TGGCTGGCTTTTACCTAACAATAATCGGGATTCTCT...TTTTGAACATTTATCTGGGAAGCTTCTAACAGCATACTCTGTCAAGTCAACTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CAA 90 bp | CTGTTCTTCAGTTCGACACACAACTGGGACAAAGTGAATGAGTCAAACACTAAATCACAGACTGCTAAATaGATAGTCATTATTTCCGCA | + |
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Preference number: 5 (lower is better) Translates to: LFFSSTHNWDKVNESNTKSQTAK*IVIISA Trigger: TGCGGAAATAATGACTATCAATTTAGCAGTCTGTGA...TTTAGTGTTTGACTCATTCACTTTGTCCCAGTTGTGTGTCGAACTGAAGAACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS-3UTR CAA 90 bp | ACACACAACTGGGACAAAGTGAATGAGTCAAACACTAAAACATCTTCTGAATGTGAAGAAGACTTCACCTaGGCGATGATCTTAGCATAT | + |
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Preference number: 5 (lower is better) Translates to: THNWDKVNESNTKTSSECEEDFT*AMILAY Trigger: ATATGCTAAGATCATCGCCAAGGTGAAGTCTTCTTC...ACATTCAGAAGATGTTTTAGTGTTTGACTCATTCACTTTGTCCCAGTTGTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CCA 72 bp | CAAGGAGTGTGGGCACCACGGAGAGCTGTATGGGGATaGAGTCTGGCCTTCCAAAAGCTGACCACACAGAGA | + |
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Preference number: 6 (lower is better) Translates to: QGVWAPRRAVWG*SLAFQKLTTQR Trigger: TCTCTGTGTGGTCAGCTTTTGGAAGGCCAGACTCCATCCCCATACAGCTCTCCGTGGTGCCCACACTCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS TCA 72 bp | GAGCTGTATGGGGATGGAGTCTGGCCTTCCAAAAGCTaGCCACACAGAGACGACCGCATAAGGAATCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: ELYGDGVWPSKS*PHRDDRIRNPG Trigger: GCCTGGATTCCTTATGCGGTCGTCTCTGTGTGGTCAGCTTTTGGAAGGCCAGACTCCATCCCCATACAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CCA 72 bp | TTGGATTGTACATCGCTGCTGATTTTGCAAGGAGTGTaGGCACCACGGAGAGCTGTATGGGGATGGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LDCTSLLILQGV*APRRAVWGWSL Trigger: CAGACTCCATCCCCATACAGCTCTCCGTGGTGCCCACACTCCTTGCAAAATCAGCAGCGATGTACAATCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CCA 72 bp | AGCATTGCCACCTTGGTCAGCTTCACCTCAAGTACATaGCTGCTATGGATTCGACTGTCGAAATGGGCTACC | + |
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Preference number: 6 (lower is better) Translates to: SIATLVSFTSST*LLWIRLSKWAT Trigger: GGTAGCCCATTTCGACAGTCGAATCCATAGCAGCCATGTACTTGAGGTGAAGCTGACCAAGGTGGCAATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CCA 72 bp | ACATGGGCACTAGTAAATCTGGAACTGCTCTCTGGATaGATCTCCAGCACAGCAGAAGACTTCCTGACTGCG | + |
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Preference number: 6 (lower is better) Translates to: TWALVNLELLSG*ISSTAEDFLTA Trigger: CGCAGTCAGGAAGTCTTCTGCTGTGCTGGAGATCCATCCAGAGAGCAGTTCCAGATTTACTAGTGCCCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS GCA 72 bp | TTGCCACCTTGGTCAGCTTCACCTCAAGTACATGGCTaGTATGGATTCGACTGTCGAAATGGGCTACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LPPWSASPQVHG*YGFDCRNGLPL Trigger: AAGAGGTAGCCCATTTCGACAGTCGAATCCATAGCAGCCATGTACTTGAGGTGAAGCTGACCAAGGTGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CCA 72 bp | CATAACATGGGCACTAGTAAATCTGGAACTGCTCTCTaGATGGATCTCCAGCACAGCAGAAGACTTCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: HNMGTSKSGTAL*MDLQHSRRLPD Trigger: GTCAGGAAGTCTTCTGCTGTGCTGGAGATCCATCCAGAGAGCAGTTCCAGATTTACTAGTGCCCATGTTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS TCA 72 bp | AGAAGAAGACTTCACCTTGGCGATGATCTTAGCATATaGGAAAACAATCACAGCCGTTGGCAGCAGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RRRLHLGDDLSI*ENNHSRWQQEA Trigger: TGCCTCCTGCTGCCAACGGCTGTGATTGTTTTCTCATATGCTAAGATCATCGCCAAGGTGAAGTCTTCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CCA 72 bp | TCAAGTACATGGCTGCTATGGATTCGACTGTCGAAATaGGCTACCTCTTTAGAAGAAGACTTCACCTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: SSTWLLWIRLSK*ATSLEEDFTLA Trigger: CGCCAAGGTGAAGTCTTCTTCTAAAGAGGTAGCCCATTTCGACAGTCGAATCCATAGCAGCCATGTACTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CCA 72 bp | ACCTTGGTCAGCTTCACCTCAAGTACATGGCTGCTATaGATTCGACTGTCGAAATGGGCTACCTCTTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: TLVSFTSSTWLL*IRLSKWATSLE Trigger: TTCTAAAGAGGTAGCCCATTTCGACAGTCGAATCCATAGCAGCCATGTACTTGAGGTGAAGCTGACCAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CAA 90 bp | AACGGCTTGCCTACAACTGATATCCCCAGATCACAGACTGCTAAATaGATAGTCATTATTTCCGCAGGTCTCAGCTTCTTCTTGCGTCTA | + |
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Preference number: 6 (lower is better) Translates to: NGLPTTDIPRSQTAK*IVIISAGLSFFLRL Trigger: TAGACGCAAGAAGAAGCTGAGACCTGCGGAAATAATGACTATCAATTTAGCAGTCTGTGATCTGGGGATATCAGTTGTAGGCAAGCCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS CAA 90 bp | ATTCGACTGTCGAAATGGGCTACCTCTTTAGAAGAAGACTTCACCTaGGCGATGATCTTAGCATATGAGAAAACAATCACAGCCGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: IRLSKWATSLEEDFT*AMILAYEKTITAVG Trigger: GCCAACGGCTGTGATTGTTTTCTCATATGCTAAGATCATCGCCAAGGTGAAGTCTTCTTCTAAAGAGGTAGCCCATTTCGACAGTCGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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| CDS GCA 72 bp | AGCACAGCAGAAGACTTCCTGACTGCGGTTACAGTATaGAGCCTAAAGTCTTCCAAAGATTTCTTCTTCGTT | + |
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Preference number: 6 (lower is better) Translates to: STAEDFLTAVTV*SLKSSKDFFFV Trigger: AACGAAGAAGAAATCTTTGGAAGACTTTAGGCTGCATACTGTAACCGCAGTCAGGAAGTCTTCTGCTGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068355.8 |
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