Pregenerated sensors for OPN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021799Ensembl transcript IDs: ENSMUST00000022331.3, ENSMUST00000168444.9
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCCTTCCCCGTGTTTGCCCAGCATCAAAACCCGCGCAGAGAGGTaGACACCATCACACTCTGTCACCCACACAACACAGAGGCATCAC | + |
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Preference number: 1 (lower is better) Translates to: LPSPCLPSIKTRAER*TPSHSVTHTTQRHH Trigger: GTGATGCCTCTGTGTTGTGTGGGTGACAGAGTGTGATGGTGTTCACCTCTCTGCGCGGGTTTTGATGCTGGGCAAACACGGGGAAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| 3UTR GCA 90 bp | GGAACGAGTAGGGGCAGGGTGTGCACACTTGTTGCTTGGTGTGCATaGAATAGGTACCTCTGTGCCTGCCAGTGCCCATGTACATGTGAG | + |
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Preference number: 1 (lower is better) Translates to: GTSRGRVCTLVAWCA*NRYLCACQCPCTCE Trigger: CTCACATGTACATGGGCACTGGCAGGCACAGAGGTACCTATTGCATGCACACCAAGCAACAAGTGTGCACACCCTGCCCCTACTCGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| 3UTR GCA 90 bp | GAACACCTTCAAAGCTTCCAGGCTTGTGACATAATCCTGGGTCTGTaGATGGGATGGGGAGGTGACGGGGCTGGGCAAGTACCAGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: EHLQSFQACDIILGL*MGWGGDGAGQVPEE Trigger: TTCTTCTGGTACTTGCCCAGCCCCGTCACCTCCCCATCCCATGCACAGACCCAGGATTATGTCACAAGCCTGGAAGCTTTGAAGGTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| 3UTR-3UTR TCA 90 bp | TTCCCCAGTGCCATCGCCATTGTCATTGTCTGGACAATCGCAGCACATACAGCGGTGTGGCTGCTGAGCTaGGTAGCGGCAGACTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: FPSAIAIVIVWTIAAHTAVWLLS*VAADCA Trigger: AGCACAGTCTGCCGCTACTCAGCTCAGCAGCCACAC...CGCTGTATGTGCTGCGATTGTCCAGACAATGACAATGGCGATGGCACTGGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| 3UTR-3UTR CCA 90 bp | GGAACTTGGACCGCTAACATGGAACGAGTAGGGGCAGGGTGTGCACACTTGTTGAGAGGCAACCGCTGCTaGAAGGGGAGCGGGAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: GTWTANMERVGAGCAHLLRGNRC*KGSGKN Trigger: GTTTTTCCCGCTCCCCTTCCAGCAGCGGTTGCCTCT...CAACAAGTGTGCACACCCTGCCCCTACTCGTTCCATGTTAGCGGTCCAAGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| 3UTR CAA 90 bp | ACTTGGACCGCTAACATGGAACGAGTAGGGGCAGGGTGTGCACACTaGTTGCTTGGTGTGCATGCAATAGGTACCTCTGTGCCTGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: TWTANMERVGAGCAH*LLGVHAIGTSVPAS Trigger: ACTGGCAGGCACAGAGGTACCTATTGCATGCACACCAAGCAACAAGTGTGCACACCCTGCCCCTACTCGTTCCATGTTAGCGGTCCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| 3UTR-3UTR TCA 90 bp | TGTGTTCCCCAGTGCCATCGCCATTGTCATTGTCTGGACAATCGCAGCACATACCCAGTGTGGCACGAGTaGCAGGAACACCTTCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: CVPQCHRHCHCLDNRSTYPVWHE*QEHLQS Trigger: GCTTTGAAGGTGTTCCTGTCACTCGTGCCACACTGG...GTATGTGCTGCGATTGTCCAGACAATGACAATGGCGATGGCACTGGGGAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| 3UTR TCA 72 bp | TCGTGCTTCAGGCGGGGCCCAGTGTGGCTGCTGAGCTaGGTAGCGGCAGACTGTGCTTCGCGGCGTGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: SCFRRGPVWLLS*VAADCASRRGK Trigger: CTTTCCACGCCGCGAAGCACAGTCTGCCGCTACTCAGCTCAGCAGCCACACTGGGCCCCGCCTGAAGCACGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| 3UTR GCA 72 bp | CCCAGTGTGGCTGCTGAGCTGAGTAGCGGCAGACTGTaGTTCGCGGCGTGGAAAGGGGCCGGAGATTCGTAT | + |
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Preference number: 3 (lower is better) Translates to: PSVAAELSSGRL*FAAWKGAGDSY Trigger: ATACGAATCTCCGGCCCCTTTCCACGCCGCGAAGCACAGTCTGCCGCTACTCAGCTCAGCAGCCACACTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| 3UTR TCA 72 bp | CTCCTCGGTGACATCTTGAGCACAGGCCATCGGCAGTaGGCTAGTACATGGCTTGCAGCTCCCTTCCCCGTG | + |
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Preference number: 3 (lower is better) Translates to: LLGDILSTGHRQ*ASTWLAAPFPV Trigger: CACGGGGAAGGGAGCTGCAAGCCATGTACTAGCTCACTGCCGATGGCCTGTGCTCAAGATGTCACCGAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| 3UTR CCA 72 bp | TGTCATTGTCTGGACAATCGCAGCACATACAGCGTCTaGGGAGAGGCAACCGCTGCTGGAAGGGGAGCGGGA | + |
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Preference number: 3 (lower is better) Translates to: CHCLDNRSTYSV*GEATAAGRGAG Trigger: TCCCGCTCCCCTTCCAGCAGCGGTTGCCTCTCCCCAGACGCTGTATGTGCTGCGATTGTCCAGACAATGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| 3UTR CCA 72 bp | GGAACGAGTAGGGGCAGGGTGTGCACACTTGTTGCTTaGTGTGCATGCAATAGGTACCTCTGTGCCTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: GTSRGRVCTLVA*CACNRYLCACQ Trigger: CTGGCAGGCACAGAGGTACCTATTGCATGCACACCAAGCAACAAGTGTGCACACCCTGCCCCTACTCGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| 3UTR TCA 72 bp | CCGTGTTTGCCCAGCATCAAAACCCGCGCAGAGAGGTaGACACCATCACACTCTGTCACCCACACAACACAG | + |
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Preference number: 3 (lower is better) Translates to: PCLPSIKTRAER*TPSHSVTHTTQ Trigger: CTGTGTTGTGTGGGTGACAGAGTGTGATGGTGTTCACCTCTCTGCGCGGGTTTTGATGCTGGGCAAACACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| 3UTR GCA 72 bp | GTTGCTTGGTGTGCATGCAATAGGTACCTCTGTGCCTaGCAGTGCCCATGTACATGTGAGTGTGGGCCACAG | + |
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Preference number: 3 (lower is better) Translates to: VAWCACNRYLCA*QCPCTCECGPQ Trigger: CTGTGGCCCACACTCACATGTACATGGGCACTGGCAGGCACAGAGGTACCTATTGCATGCACACCAAGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| 3UTR CCA 72 bp | GATGTGTTCCCCAGTGCCATCGCCATTGTCATTGTCTaGACAATCGCAGCACATACAGCGTCTGGGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: DVFPSAIAIVIV*TIAAHTASGER Trigger: CCTCTCCCCAGACGCTGTATGTGCTGCGATTGTCCAGACAATGACAATGGCGATGGCACTGGGGAACACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| 3UTR TCA 72 bp | CGAGTGACAGGAACACCTTCAAAGCTTCCAGGCTTGTaGCATAATCCTGGGTCTGTGCATGGGATGGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: RVTGTPSKLPGL*HNPGSVHGMGR Trigger: CCTCCCCATCCCATGCACAGACCCAGGATTATGTCACAAGCCTGGAAGCTTTGAAGGTGTTCCTGTCACTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| 3UTR TCA 72 bp | AAAGGGGCCGGAGATTCGTATCCAGTGTGGCACGAGTaGCAGGAACACCTTCAAAGCTTCCAGGCTTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: KGAGDSYPVWHE*QEHLQSFQACD Trigger: GTCACAAGCCTGGAAGCTTTGAAGGTGTTCCTGTCACTCGTGCCACACTGGATACGAATCTCCGGCCCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| 3UTR CCA 72 bp | TCCTGTGCCTTGTCAGATCCACATCTGGAAGGAACTTaGACCGCTAACATGGAACGAGTAGGGGCAGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: SCALSDPHLEGT*TANMERVGAGC Trigger: ACACCCTGCCCCTACTCGTTCCATGTTAGCGGTCCAAGTTCCTTCCAGATGTGGATCTGACAAGGCACAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| 3UTR-3UTR CAA 90 bp | GCACTGGAGCTGACAGCTGGCCTTCTTTTAATAGCTACAAGTGTTCTCCTCGGTGAGCTAGTACATGGCTaGCAGCTCCCTTCCCCGTGT | + |
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Preference number: 3 (lower is better) Translates to: ALELTAGLLLIATSVLLGELVHG*QLPSPC Trigger: ACACGGGGAAGGGAGCTGCAAGCCATGTACTAGCTC...ACCGAGGAGAACACTTGTAGCTATTAAAAGAAGGCCAGCTGTCAGCTCCAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| 3UTR GCA 72 bp | CTGACAGCATGTCATGCGCAGAGCTACACAGTCACATaGAGATATTCCCCTAGATACAGATCATACTTAGAC | + |
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Preference number: 3 (lower is better) Translates to: LTACHAQSYTVT*RYSPRYRSYLD Trigger: GTCTAAGTATGATCTGTATCTAGGGGAATATCTGCATGTGACTGTGTAGCTCTGCGCATGACATGCTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| 3UTR GCA 72 bp | ATATACATATGGTACAACATAGCTGACAGCATGTCATaGGCAGAGCTACACAGTCACATGCAGATATTCCCC | + |
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Preference number: 3 (lower is better) Translates to: IYIWYNIADSMS*AELHSHMQIFP Trigger: GGGGAATATCTGCATGTGACTGTGTAGCTCTGCGCATGACATGCTGTCAGCTATGTTGTACCATATGTATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR GCA 90 bp | CTTCAGGCGGGGCCCAGTGTGGCTGCTGAGCTGAGTAGCGGCAGACTGTGCTTCATCTTCCACTCACTCTaGAGCCGCTGCCACTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LQAGPSVAAELSSGRLCFIFHSL*SRCHCR Trigger: GCGGCAGTGGCAGCGGCTGCAGAGTGAGTGGAAGAT...GAAGCACAGTCTGCCGCTACTCAGCTCAGCAGCCACACTGGGCCCCGCCTGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR CCA 90 bp | CTGTGCATGGGATGGGGAGGTGACGGGGCTGGGCAAGTACCAGAAGAAAGGGAGCTGGGACATCGACTGTaGGGAAGGGGACCCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LCMGWGGDGAGQVPEERELGHRL*GRGPRQ Trigger: CTGCCTGGGTCCCCTTCCCCACAGTCGATGTCCCAG...CTCCCTTTCTTCTGGTACTTGCCCAGCCCCGTCACCTCCCCATCCCATGCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR CCA 90 bp | TGTGCATGGGATGGGGAGGTGACGGGGCTGGGCAAGTACCAGAAGAAAGGGAGGGAGGGGTGGCTGCGCTaGCCTGATACACCGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: CAWDGEVTGLGKYQKKGREGWLR*PDTPRS Trigger: GCTTCTCGGTGTATCAGGCCAGCGCAGCCACCCCTC...CCTCCCTTTCTTCTGGTACTTGCCCAGCCCCGTCACCTCCCCATCCCATGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR TCA 90 bp | CTTCAGGCGGGGCCCAGTGTGGCTGCTGAGCTGAGTAGCGGCAGACTGTGCTTCGGGCAGGACTGGTTGTaGAGCTGGGATCCTGAGTTA | + |
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Preference number: 4 (lower is better) Translates to: LQAGPSVAAELSSGRLCFGQDWL*SWDPEL Trigger: TAACTCAGGATCCCAGCTTCACAACCAGTCCTGCCC...GAAGCACAGTCTGCCGCTACTCAGCTCAGCAGCCACACTGGGCCCCGCCTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR CCA 90 bp | CTGGGTCTGTGCATGGGATGGGGAGGTGACGGGGCTGGGCAAGTACCAGAAGAACTTGGCGATGACGGCTaGCACCGAGCTCATGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: LGLCMGWGGDGAGQVPEELGDDG*HRAHVG Trigger: CCCTACATGAGCTCGGTGCCAGCCGTCATCGCCAAG...TTCTTCTGGTACTTGCCCAGCCCCGTCACCTCCCCATCCCATGCACAGACCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR GCA 90 bp | CTGTGCATGGGATGGGGAGGTGACGGGGCTGGGCAAGTACCAGAAGAAAGGGAGGACTGTCCACTTGCTTaGTGGGCAGCTCCCCATGCA | + |
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Preference number: 4 (lower is better) Translates to: LCMGWGGDGAGQVPEEREDCPLA*WAAPHA Trigger: TGCATGGGGAGCTGCCCAGCAAGCAAGTGGACAGTC...CTCCCTTTCTTCTGGTACTTGCCCAGCCCCGTCACCTCCCCATCCCATGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR GCA 90 bp | TGTGCATGGGATGGGGAGGTGACGGGGCTGGGCAAGTACCAGAAGAAAGGGAGGCCGTTCCAAATGCCTTaGAGGGCAGGACTGGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: CAWDGEVTGLGKYQKKGRPFQMP*RAGLVV Trigger: CACAACCAGTCCTGCCCTGCAAGGCATTTGGAACGG...CCTCCCTTTCTTCTGGTACTTGCCCAGCCCCGTCACCTCCCCATCCCATGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR GCA 90 bp | GCCAGTGCCCATGTACATGTGAGTGTGGGCCACAGTGAGAATGCTATGGGAGGACCAAGGCAAGGCAGGTaGTGGGCAATGGCCACCCTG | + |
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Preference number: 4 (lower is better) Translates to: ASAHVHVSVGHSENAMGGPRQGR*WAMATL Trigger: CAGGGTGGCCATTGCCCAGCACCTGCCTTGCCTTGG...TCCTCCCATAGCATTCTCACTGTGGCCCACACTCACATGTACATGGGCACTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR CCA 90 bp | GGAACTTGGACCGCTAACATGGAACGAGTAGGGGCAGGGTGTGCACACTTGTTGTGGGGAGGTGTCCCTTaGTCTGGGGGCTGGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GTWTANMERVGAGCAHLLWGGVP*SGGWKR Trigger: CCTCTTCCAGCCCCCAGACCAAGGGACACCTCCCCA...CAACAAGTGTGCACACCCTGCCCCTACTCGTTCCATGTTAGCGGTCCAAGTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR TCA 90 bp | GAAAGGGGCCGGAGATTCGTATCCAGTGTGGCACGAGTGACAGGAACACCTTCACGGGGCCTGAGTGACTaGCATGAGGAAGTCGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: ERGRRFVSSVARVTGTPSRGLSD*HEEVAD Trigger: GTCAGCGACTTCCTCATGTCAGTCACTCAGGCCCCG...TGAAGGTGTTCCTGTCACTCGTGCCACACTGGATACGAATCTCCGGCCCCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR TCA 90 bp | CATGTACATGTGAGTGTGGGCCACAGTGAGAATGCTATGGGAGGAGCTAGAGGCCAGAAGCCTTGGCGATaGCGGCTGGCACCGAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: HVHVSVGHSENAMGGARGQKPWR*RLAPSS Trigger: TGAGCTCGGTGCCAGCCGTCATCGCCAAGGCTTCTG...GCCTCTAGCTCCTCCCATAGCATTCTCACTGTGGCCCACACTCACATGTACATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR GCA 90 bp | GCCAGTGCCCATGTACATGTGAGTGTGGGCCACAGTGAGAATGCTATGGGAGGAGTCTTTTGGATCCCCTaGCGATGGTGGCCAGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: ASAHVHVSVGHSENAMGGVFWIP*RWWPVD Trigger: GTCCACTGGCCACCATCGGCAGGGGATCCAAAAGAC...TCCTCCCATAGCATTCTCACTGTGGCCCACACTCACATGTACATGGGCACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR CCA 90 bp | GCCAGTGCCCATGTACATGTGAGTGTGGGCCACAGTGAGAATGCTATGGGAGGACTGAGGTCTGAGGACTaGCTGCTCAATGTGGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: ASAHVHVSVGHSENAMGGLRSED*LLNVER Trigger: CCGCTCCACATTGAGCAGCCAGTCCTCAGACCTCAG...TCCTCCCATAGCATTCTCACTGTGGCCCACACTCACATGTACATGGGCACTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR CCA 90 bp | CCGGAGATTCGTATCCAGTGTGGCACGAGTGACAGGAACACCTTCAAAGCTTCCAGGTGTCCCTTGGTCTaGGGGCTGGAAGAGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PEIRIQCGTSDRNTFKASRCPLV*GLEEAL Trigger: CAAGGCCTCTTCCAGCCCCCAGACCAAGGGACACCT...GGAAGCTTTGAAGGTGTTCCTGTCACTCGTGCCACACTGGATACGAATCTCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR TCA 90 bp | CATCACACTCTGTCACCCACACAACACAGAGGCATCACAGTGACAGAGAGCATAACCCAGGCAGCAGCCTaGTGTGCAGATGTCGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: HHTLSPTQHRGITVTESITQAAA*CADVVG Trigger: CCCCACGACATCTGCACATCAGGCTGCTGCCTGGGT...TATGCTCTCTGTCACTGTGATGCCTCTGTGTTGTGTGGGTGACAGAGTGTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR TCA 90 bp | GGAACTTGGACCGCTAACATGGAACGAGTAGGGGCAGGGTGTGCACACTTGTTGAAGAAGACCGGGGCCTaGGTGACTGACATGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GTWTANMERVGAGCAHLLKKTGA*VTDMRK Trigger: CTTCCTCATGTCAGTCACTCAGGCCCCGGTCTTCTT...CAACAAGTGTGCACACCCTGCCCCTACTCGTTCCATGTTAGCGGTCCAAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR TCA 90 bp | AGATTCGTATCCAGTGTGGCACGAGTGACAGGAACACCTTCAAAGCTTCCAGGCCACGCACCTGGGGTGTaGAGGTCATGTAGTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RFVSSVARVTGTPSKLPGHAPGV*RSCSPR Trigger: CCTGGGACTACATGACCTTCACACCCCAGGTGCGTG...GCCTGGAAGCTTTGAAGGTGTTCCTGTCACTCGTGCCACACTGGATACGAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR GCA 90 bp | CTGGGTCTGTGCATGGGATGGGGAGGTGACGGGGCTGGGCAAGTACCAGAAGAAGAGGAAGTCGCTGACTaGGAGGTTGATGATGAACAT | + |
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Preference number: 4 (lower is better) Translates to: LGLCMGWGGDGAGQVPEEEEVAD*EVDDEH Trigger: ATGTTCATCATCAACCTCGCAGTCAGCGACTTCCTC...TTCTTCTGGTACTTGCCCAGCCCCGTCACCTCCCCATCCCATGCACAGACCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR GCA 90 bp | TCAAAACCCGCGCAGAGAGGTGAACACCATCACACTCTGTCACCCACACAACACCTGGGCAGCTCCCCATaGAGCGGTTGTTTCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: SKPAQRGEHHHTLSPTQHLGSSP*SGCFCV Trigger: GACACAGAAACAACCGCTGCATGGGGAGCTGCCCAG...GTGTTGTGTGGGTGACAGAGTGTGATGGTGTTCACCTCTCTGCGCGGGTTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR GCA 90 bp | CCGGAGATTCGTATCCAGTGTGGCACGAGTGACAGGAACACCTTCAAAGCTTCCCTGGGCAGCTCCCCATaGAGCGGTTGTTTCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: PEIRIQCGTSDRNTFKASLGSSP*SGCFCV Trigger: GACACAGAAACAACCGCTGCATGGGGAGCTGCCCAG...GGAAGCTTTGAAGGTGTTCCTGTCACTCGTGCCACACTGGATACGAATCTCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR CCA 90 bp | TCAAAACCCGCGCAGAGAGGTGAACACCATCACACTCTGTCACCCACACAACACCCAACCAAAGAAAGGTaGCAGACTCCAGGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SKPAQRGEHHHTLSPTQHPTKER*QTPGQG Trigger: GCCCTGGCCTGGAGTCTGCCACCTTTCTTTGGTTGG...GTGTTGTGTGGGTGACAGAGTGTGATGGTGTTCACCTCTCTGCGCGGGTTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CCA 90 bp | GTTCCCCAGTGCCATCGCCATTGTCATTGTCTGGACAATCGCAGCACATACAGCCCAACCAAAGAAAGGTaGCAGACTCCAGGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VPQCHRHCHCLDNRSTYSPTKER*QTPGQG Trigger: GCCCTGGCCTGGAGTCTGCCACCTTTCTTTGGTTGG...GCTGTATGTGCTGCGATTGTCCAGACAATGACAATGGCGATGGCACTGGGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR CCA 90 bp | GCACTGGAGCTGACAGCTGGCCTTCTTTTAATAGCTACAAGTGTTCTCCTCGGTGAGGGGTGGCTGCGCTaGCCTGATACACCGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: ALELTAGLLLIATSVLLGEGWLR*PDTPRS Trigger: GCTTCTCGGTGTATCAGGCCAGCGCAGCCACCCCTC...ACCGAGGAGAACACTTGTAGCTATTAAAAGAAGGCCAGCTGTCAGCTCCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CCA 90 bp | TCAAAACCCGCGCAGAGAGGTGAACACCATCACACTCTGTCACCCACACAACACCTGAGGTCTGAGGACTaGCTGCTCAATGTGGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: SKPAQRGEHHHTLSPTQHLRSED*LLNVER Trigger: CCGCTCCACATTGAGCAGCCAGTCCTCAGACCTCAG...GTGTTGTGTGGGTGACAGAGTGTGATGGTGTTCACCTCTCTGCGCGGGTTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR TCA 90 bp | CCCACACAACACAGAGGCATCACAGTGACAGAGAGCATATATGCCAGGAACATGCACGCACCTGGGGTGTaGAGGTCATGTAGTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PTQHRGITVTESIYARNMHAPGV*RSCSPR Trigger: CCTGGGACTACATGACCTTCACACCCCAGGTGCGTG...CATGTTCCTGGCATATATGCTCTCTGTCACTGTGATGCCTCTGTGTTGTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR GCA 90 bp | AGTAAAGTCTGTGTTCAGCTTTTGAGCCCTGGACGCGGGGAAGGGCTTTCTGAAGAAGGACTGTCCACTTaGTTGCTGGGCAGCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SKVCVQLLSPGRGEGLSEEGLST*LLGSSP Trigger: TGGGGAGCTGCCCAGCAAGCAAGTGGACAGTCCTTC...TTCAGAAAGCCCTTCCCCGCGTCCAGGGCTCAAAAGCTGAACACAGACTTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR CCA 90 bp | AGTAAAGTCTGTGTTCAGCTTTTGAGCCCTGGACGCGGGGAAGGGCTTTCTGAAAGCAGAAGAGCAGCATaGTGTAGGCACGCACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SKVCVQLLSPGRGEGLSESRRAA*CRHAPG Trigger: CCCAGGTGCGTGCCTACACCATGCTGCTCTTCTGCT...TTCAGAAAGCCCTTCCCCGCGTCCAGGGCTCAAAAGCTGAACACAGACTTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR TCA 90 bp | GGCACTGGAGCTGACAGCTGGCCTTCTTTTAATAGCTACAAGTGTTCTCCTCGGGGGCAGGACTGGTTGTaGAGCTGGGATCCTGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GTGADSWPSFNSYKCSPRGQDWL*SWDPEL Trigger: TAACTCAGGATCCCAGCTTCACAACCAGTCCTGCCC...CCGAGGAGAACACTTGTAGCTATTAAAAGAAGGCCAGCTGTCAGCTCCAGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR TCA 90 bp | AGATTCGTATCCAGTGTGGCACGAGTGACAGGAACACCTTCAAAGCTTCCAGGCGATCCAGCTGAGGTCTaGGGACTGGCTGCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: RFVSSVARVTGTPSKLPGDPAEV*GLAAQC Trigger: ACATTGAGCAGCCAGTCCTCAGACCTCAGCTGGATC...GCCTGGAAGCTTTGAAGGTGTTCCTGTCACTCGTGCCACACTGGATACGAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR GCA 90 bp | CCATCACACTCTGTCACCCACACAACACAGAGGCATCACAGTGACAGAGAGCATCCGTTCCAAATGCCTTaGAGGGCAGGACTGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSHSVTHTTQRHHSDREHPFQMP*RAGLVV Trigger: CACAACCAGTCCTGCCCTGCAAGGCATTTGGAACGG...ATGCTCTCTGTCACTGTGATGCCTCTGTGTTGTGTGGGTGACAGAGTGTGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR GCA 90 bp | ATAGGCACTGGAGCTGACAGCTGGCCTTCTTTTAATAGCTACAAGTGTTCTCCTCCAAGGCAAGGCAGGTaGTGGGCAATGGCCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IGTGADSWPSFNSYKCSPPRQGR*WAMATL Trigger: CAGGGTGGCCATTGCCCAGCACCTGCCTTGCCTTGG...AGGAGAACACTTGTAGCTATTAAAAGAAGGCCAGCTGTCAGCTCCAGTGCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CCA 90 bp | TGTCATGCGCAGAGCTACACAGTCACATGCAGATATTCCCCTAGATACAGATCACTGGGACATCGACTGTaGGGAAGGGGACCCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CHAQSYTVTCRYSPRYRSLGHRL*GRGPRQ Trigger: CTGCCTGGGTCCCCTTCCCCACAGTCGATGTCCCAG...TGATCTGTATCTAGGGGAATATCTGCATGTGACTGTGTAGCTCTGCGCATGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CCA 90 bp | GCCAGTGCCCATGTACATGTGAGTGTGGGCCACAGTGAGAATGCTATGGGAGGAGATGAACATGTTTGCTaGTGTCCGCAGGCCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASAHVHVSVGHSENAMGGDEHVC*CPQASV Trigger: AACAGAGGCCTGCGGACACCAGCAAACATGTTCATC...TCCTCCCATAGCATTCTCACTGTGGCCCACACTCACATGTACATGGGCACTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR CCA 90 bp | CCCACACAACACAGAGGCATCACAGTGACAGAGAGCATATATGCCAGGAACATGAGCAGAAGAGCAGCATaGTGTAGGCACGCACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTQHRGITVTESIYARNMSRRAA*CRHAPG Trigger: CCCAGGTGCGTGCCTACACCATGCTGCTCTTCTGCT...CATGTTCCTGGCATATATGCTCTCTGTCACTGTGATGCCTCTGTGTTGTGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR TCA 90 bp | ATAGGCACTGGAGCTGACAGCTGGCCTTCTTTTAATAGCTACAAGTGTTCTCCTCGGGGCCTGAGTGACTaGCATGAGGAAGTCGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IGTGADSWPSFNSYKCSPRGLSD*HEEVAD Trigger: GTCAGCGACTTCCTCATGTCAGTCACTCAGGCCCCG...AGGAGAACACTTGTAGCTATTAAAAGAAGGCCAGCTGTCAGCTCCAGTGCCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR TCA 90 bp | GCACTGGAGCTGACAGCTGGCCTTCTTTTAATAGCTACAAGTGTTCTCCTCGGTGATCCAGCTGAGGTCTaGGGACTGGCTGCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ALELTAGLLLIATSVLLGDPAEV*GLAAQC Trigger: ACATTGAGCAGCCAGTCCTCAGACCTCAGCTGGATC...ACCGAGGAGAACACTTGTAGCTATTAAAAGAAGGCCAGCTGTCAGCTCCAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR GCA 90 bp | CCATCACACTCTGTCACCCACACAACACAGAGGCATCACAGTGACAGAGAGCATCCAGCAGGATCACCGTaGCTAGGGTATAGTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSHSVTHTTQRHHSDREHPAGSP*LGYSEH Trigger: ATGCTCACTATACCCTAGGCACGGTGATCCTGCTGG...ATGCTCTCTGTCACTGTGATGCCTCTGTGTTGTGTGGGTGACAGAGTGTGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR GCA 90 bp | AGATTCGTATCCAGTGTGGCACGAGTGACAGGAACACCTTCAAAGCTTCCAGGCCCAGCAGGATCACCGTaGCTAGGGTATAGTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RFVSSVARVTGTPSKLPGPAGSP*LGYSEH Trigger: ATGCTCACTATACCCTAGGCACGGTGATCCTGCTGG...GCCTGGAAGCTTTGAAGGTGTTCCTGTCACTCGTGCCACACTGGATACGAATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR GCA 90 bp | TCACACTCTGTCACCCACACAACACAGAGGCATCACAGTGACAGAGAGCATATAGAAGGACTGTCCACTTaGTTGCTGGGCAGCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHSVTHTTQRHHSDREHIEGLST*LLGSSP Trigger: TGGGGAGCTGCCCAGCAAGCAAGTGGACAGTCCTTC...TATATGCTCTCTGTCACTGTGATGCCTCTGTGTTGTGTGGGTGACAGAGTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CCA 90 bp | GCACTGGAGCTGACAGCTGGCCTTCTTTTAATAGCTACAAGTGTTCTCCTCGGTTCTTGTAGAGGCTGCTaGCAAAGAAGACCGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALELTAGLLLIATSVLLGSCRGC*QRRPGP Trigger: AGGCCCCGGTCTTCTTTGCCAGCAGCCTCTACAAGA...ACCGAGGAGAACACTTGTAGCTATTAAAAGAAGGCCAGCTGTCAGCTCCAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CCA 90 bp | CCATCACACTCTGTCACCCACACAACACAGAGGCATCACAGTGACAGAGAGCATTTAGATCTCTGTACCTaGGGGCTGGAAGAGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSHSVTHTTQRHHSDREHLDLCT*GLEEAL Trigger: CAAGGCCTCTTCCAGCCCCCAGGTACAGAGATCTAA...ATGCTCTCTGTCACTGTGATGCCTCTGTGTTGTGTGGGTGACAGAGTGTGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR GCA 90 bp | ATAGGCACTGGAGCTGACAGCTGGCCTTCTTTTAATAGCTACAAGTGTTCTCCTGTCTTTTGGATCCCCTaGCGATGGTGGCCAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IGTGADSWPSFNSYKCSPVFWIP*RWWPVD Trigger: GTCCACTGGCCACCATCGGCAGGGGATCCAAAAGAC...AGGAGAACACTTGTAGCTATTAAAAGAAGGCCAGCTGTCAGCTCCAGTGCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR GCA 90 bp | ATAGGCACTGGAGCTGACAGCTGGCCTTCTTTTAATAGCTACAAGTGTTCTCCTGACTGTCCACTTGCTTaGTGGGCAGCTCCCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: IGTGADSWPSFNSYKCSPDCPLA*WAAPHA Trigger: TGCATGGGGAGCTGCCCAGCAAGCAAGTGGACAGTC...AGGAGAACACTTGTAGCTATTAAAAGAAGGCCAGCTGTCAGCTCCAGTGCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CCA 90 bp | CCATCACACTCTGTCACCCACACAACACAGAGGCATCACAGTGACAGAGAGCATGATGAACATGTTTGCTaGTGTCCGCAGGCCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSHSVTHTTQRHHSDREHDEHVC*CPQASV Trigger: AACAGAGGCCTGCGGACACCAGCAAACATGTTCATC...ATGCTCTCTGTCACTGTGATGCCTCTGTGTTGTGTGGGTGACAGAGTGTGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CCA 90 bp | CATCACACTCTGTCACCCACACAACACAGAGGCATCACAGTGACAGAGAGCATAGCAAGCCTGCCTTTCTaGTCACCCCTTAGGCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: HHTLSPTQHRGITVTESIASLPF*SPLRLL Trigger: AAGTAGCCTAAGGGGTGACCAGAAAGGCAGGCTTGC...TATGCTCTCTGTCACTGTGATGCCTCTGTGTTGTGTGGGTGACAGAGTGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CCA 90 bp | GCACTGGAGCTGACAGCTGGCCTTCTTTTAATAGCTACAAGTGTTCTCCTCGGTGGAAACTGGGATGTATaGGGATGGGGACACTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALELTAGLLLIATSVLLGGNWDV*GWGHSE Trigger: CTCAGAGTGTCCCCATCCCCATACATCCCAGTTTCC...ACCGAGGAGAACACTTGTAGCTATTAAAAGAAGGCCAGCTGTCAGCTCCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR TCA 90 bp | AGATTCGTATCCAGTGTGGCACGAGTGACAGGAACACCTTCAAAGCTTCCAGGCGTGAAGCTGGGATCCTaGGTTAAGCTTGACAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: RFVSSVARVTGTPSKLPGVKLGS*VKLDKT Trigger: AGTCTTGTCAAGCTTAACTCAGGATCCCAGCTTCAC...GCCTGGAAGCTTTGAAGGTGTTCCTGTCACTCGTGCCACACTGGATACGAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR TCA 90 bp | TCCTGTGCCTTGTCAGATCCACATCTGGAAGGAACTTGGACCGCTAACATGGAACCATCTTCTAGGTTCTaGCTGCAGAAGGACTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCALSDPHLEGTWTANMEPSSRF*LQKDCP Trigger: TGGACAGTCCTTCTGCAGTCAGAACCTAGAAGATGG...TTCCATGTTAGCGGTCCAAGTTCCTTCCAGATGTGGATCTGACAAGGCACAGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR GCA 90 bp | AGTAAAGTCTGTGTTCAGCTTTTGAGCCCTGGACGCGGGGAAGGGCTTTCTGAACTTCTAGGTTCTGACTaGAGAAGGACTGTCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKVCVQLLSPGRGEGLSELLGSD*RRTVHL Trigger: CAAGTGGACAGTCCTTCTGCAGTCAGAACCTAGAAG...TTCAGAAAGCCCTTCCCCGCGTCCAGGGCTCAAAAGCTGAACACAGACTTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR GCA 90 bp | TCACACTCTGTCACCCACACAACACAGAGGCATCACAGTGACAGAGAGCATATATGCACACAGCAAGCCTaGCTTTCTGGTCACCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SHSVTHTTQRHHSDREHICTQQA*LSGHPL Trigger: TAAGGGGTGACCAGAAAGGCAGGCTTGCTGTGTGCA...TATATGCTCTCTGTCACTGTGATGCCTCTGTGTTGTGTGGGTGACAGAGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR GCA 90 bp | GCACTGGAGCTGACAGCTGGCCTTCTTTTAATAGCTACAAGTGTTCTCCTCGGTGAGGAAGTCGCTGACTaGGAGGTTGATGATGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: ALELTAGLLLIATSVLLGEEVAD*EVDDEH Trigger: ATGTTCATCATCAACCTCGCAGTCAGCGACTTCCTC...ACCGAGGAGAACACTTGTAGCTATTAAAAGAAGGCCAGCTGTCAGCTCCAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR GCA 90 bp | TGTCATGCGCAGAGCTACACAGTCACATGCAGATATTCCCCTAGATACAGATCAGATGATGAACATGTTTaGTGGTGTCCGCAGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CHAQSYTVTCRYSPRYRSDDEHV*WCPQAS Trigger: AGAGGCCTGCGGACACCAGCAAACATGTTCATCATC...TGATCTGTATCTAGGGGAATATCTGCATGTGACTGTGTAGCTCTGCGCATGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR TCA 90 bp | ATAGGCACTGGAGCTGACAGCTGGCCTTCTTTTAATAGCTACAAGTGTTCTCCTGTGAAGCTGGGATCCTaGGTTAAGCTTGACAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: IGTGADSWPSFNSYKCSPVKLGS*VKLDKT Trigger: AGTCTTGTCAAGCTTAACTCAGGATCCCAGCTTCAC...AGGAGAACACTTGTAGCTATTAAAAGAAGGCCAGCTGTCAGCTCCAGTGCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR TCA 90 bp | GGCCACATATCTTCAAGGGCACATAAGTTATATGCATACTCTACATATACATATCAGAAGCCTTGGCGATaGCGGCTGGCACCGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GHISSRAHKLYAYSTYTYQKPWR*RLAPSS Trigger: TGAGCTCGGTGCCAGCCGTCATCGCCAAGGCTTCTG...ATATGTATATGTAGAGTATGCATATAACTTATGTGCCCTTGAAGATATGTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR TCA 90 bp | GGCCACATATCTTCAAGGGCACATAAGTTATATGCATACTCTACATATACATATGGGATGGGGACACTCTaGGAGGCCTGTGCACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHISSRAHKLYAYSTYTYGMGTL*EACAHS Trigger: GCTGTGTGCACAGGCCTCTCAGAGTGTCCCCATCCC...ATATGTATATGTAGAGTATGCATATAACTTATGTGCCCTTGAAGATATGTGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR GCA 90 bp | TGTCATGCGCAGAGCTACACAGTCACATGCAGATATTCCCCTAGATACAGATCACTTCTAGGTTCTGACTaGAGAAGGACTGTCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CHAQSYTVTCRYSPRYRSLLGSD*RRTVHL Trigger: CAAGTGGACAGTCCTTCTGCAGTCAGAACCTAGAAG...TGATCTGTATCTAGGGGAATATCTGCATGTGACTGTGTAGCTCTGCGCATGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR GCA 90 bp | GGCCACATATCTTCAAGGGCACATAAGTTATATGCATACTCTACATATACATATATCTTCCACTCACTCTaGAGCCGCTGCCACTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GHISSRAHKLYAYSTYTYIFHSL*SRCHCR Trigger: GCGGCAGTGGCAGCGGCTGCAGAGTGAGTGGAAGAT...ATATGTATATGTAGAGTATGCATATAACTTATGTGCCCTTGAAGATATGTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CCA 90 bp | GCCACATATCTTCAAGGGCACATAAGTTATATGCATACTCTACATATACATATGCTTGGCGATGACGGCTaGCACCGAGCTCATGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATYLQGHISYMHTLHIHMLGDDG*HRAHVG Trigger: CCCTACATGAGCTCGGTGCCAGCCGTCATCGCCAAG...CATATGTATATGTAGAGTATGCATATAACTTATGTGCCCTTGAAGATATGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR TCA 90 bp | GGCCACATATCTTCAAGGGCACATAAGTTATATGCATACTCTACATATACATATAAGAAGACCGGGGCCTaGGTGACTGACATGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GHISSRAHKLYAYSTYTYKKTGA*VTDMRK Trigger: CTTCCTCATGTCAGTCACTCAGGCCCCGGTCTTCTT...ATATGTATATGTAGAGTATGCATATAACTTATGTGCCCTTGAAGATATGTGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR GCA 90 bp | GCCACATATCTTCAAGGGCACATAAGTTATATGCATACTCTACATATACATATGACTCTGAGAGGCCTGTaGACACAGCAAGCCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ATYLQGHISYMHTLHIHMTLRGL*TQQACL Trigger: AAGGCAGGCTTGCTGTGTGCACAGGCCTCTCAGAGT...CATATGTATATGTAGAGTATGCATATAACTTATGTGCCCTTGAAGATATGTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR TCA 90 bp | GCCACATATCTTCAAGGGCACATAAGTTATATGCATACTCTACATATACATATGCCATCTTCTAGGTTCTaGCTGCAGAAGGACTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ATYLQGHISYMHTLHIHMPSSRF*LQKDCP Trigger: TGGACAGTCCTTCTGCAGTCAGAACCTAGAAGATGG...CATATGTATATGTAGAGTATGCATATAACTTATGTGCCCTTGAAGATATGTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| 3UTR CAA 72 bp | TGTTTGTTTGTTTGTTTGTTTTTATTTTCCTGTGCCTaGTCAGATCCACATCTGGAAGGAACTTGGACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLFVCLFLFSCA*SDPHLEGTWTA Trigger: AGCGGTCCAAGTTCCTTCCAGATGTGGATCTGACAAGGCACAGGAAAATAAAAACAAACAAACAAACAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS GCA 90 bp | ACAATCAGTGCGACCTTGGCCATCTTCCACTCACTCTGCAGCCGCTaGCACTGCCGCCTCTGCCGCAGAGGGGACTCACCGCAGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TISATLAIFHSLCSR*HCRLCRRGDSPQPS Trigger: TGAGGGCTGCGGTGAGTCCCCTCTGCGGCAGAGGCGGCAGTGGCAGCGGCTGCAGAGTGAGTGGAAGATGGCCAAGGTCGCACTGATTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS-3UTR CAA 90 bp | CTTCAGGCGGGGCCCAGTGTGGCTGCTGAGCTGAGTAGCGGCAGACTGTGCTTCAGAAGGACTGTCCACTaGCTTGCTGGGCAGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LQAGPSVAAELSSGRLCFRRTVH*LAGQLP Trigger: GGGGAGCTGCCCAGCAAGCAAGTGGACAGTCCTTCT...GAAGCACAGTCTGCCGCTACTCAGCTCAGCAGCCACACTGGGCCCCGCCTGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
||
| CDS GCA 90 bp | AGAAGAATGACAATCAGTGCGACCTTGGCCATCTTCCACTCACTCTaGAGCCGCTGCCACTGCCGCCTCTGCCGCAGAGGGGACTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: RRMTISATLAIFHSL*SRCHCRLCRRGDSP Trigger: CGGTGAGTCCCCTCTGCGGCAGAGGCGGCAGTGGCAGCGGCTGCAGAGTGAGTGGAAGATGGCCAAGGTCGCACTGATTGTCATTCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
||
| CDS TCA 90 bp | ACCCAGGGACTCTTGACGCTTCCGTCCAGAGATCCAGCTGAGGTCTaGGGACTGGCTGCTCAATGTGGAGCGGTGGGTAGAGCGGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TQGLLTLPSRDPAEV*GLAAQCGAVGRAVA Trigger: AGCTACCGCTCTACCCACCGCTCCACATTGAGCAGCCAGTCCTCAGACCTCAGCTGGATCTCTGGACGGAAGCGTCAAGAGTCCCTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS CCA 90 bp | TCACCGTGCCTAGGGTATAGTGAGCATGGTCTGGGACATCGACTGTaGGGAAGGGGACCCAGGCAGCAGCCTGATGTGCAGATGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SPCLGYSEHGLGHRL*GRGPRQQPDVQMSW Trigger: CCACGACATCTGCACATCAGGCTGCTGCCTGGGTCCCCTTCCCCACAGTCGATGTCCCAGACCATGCTCACTATACCCTAGGCACGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
||
| CDS TCA 90 bp | AGACAAAGCAGAAGAGCAGCATGGTGTAGGCACGCACCTGGGGTGTaGAGGTCATGTAGTCCCAGGAGCAGGATGTCAGCAGCCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RQSRRAAWCRHAPGV*RSCSPRSRMSAAPR Trigger: CCGAGGGGCTGCTGACATCCTGCTCCTGGGACTACATGACCTTCACACCCCAGGTGCGTGCCTACACCATGCTGCTCTTCTGCTTTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
||
| CDS CCA 90 bp | GACGAGTGCCGTTCGTCTTTTGGATCCCCTGCCGATGGTGGCCAGTaGACGTGTGATCACCAGATAGCGGTCCATGGCTATGGCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: DECRSSFGSPADGGQ*TCDHQIAVHGYGCQ Trigger: CTGACAGCCATAGCCATGGACCGCTATCTGGTGATCACACGTCCACTGGCCACCATCGGCAGGGGATCCAAAAGACGAACGGCACTCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
||
| CDS TCA 90 bp | TCTGTGTCTGTCCAGCCCACTTCACTCTCAGAACCCAGGGACTCTTaGCGCTTCCGTCCAGAGATCCAGCTGAGGTCTGAGGACTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVSVQPTSLSEPRDS*RFRPEIQLRSEDWL Trigger: CAGCCAGTCCTCAGACCTCAGCTGGATCTCTGGACGGAAGCGTCAAGAGTCCCTGGGTTCTGAGAGTGAAGTGGGCTGGACAGACACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
||
| CDS GCA 90 bp | GGAGTAGGGAGCCCAGGACAGCACGAAGAGAAGAATGACAATCAGTaGGACCTTGGCCATCTTCCACTCACTCTGCAGCCGCTGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GVGSPGQHEEKNDNQ*DLGHLPLTLQPLPL Trigger: CAGTGGCAGCGGCTGCAGAGTGAGTGGAAGATGGCCAAGGTCGCACTGATTGTCATTCTTCTCTTCGTGCTGTCCTGGGCTCCCTACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
||
| CDS-3UTR CAA 90 bp | GTTCCCCAGTGCCATCGCCATTGTCATTGTCTGGACAATCGCAGCACATACAGCTGGATGGCAGAAGCCTaGGCGATGACGGCTGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: VPQCHRHCHCLDNRSTYSWMAEA*AMTAGT Trigger: GGTGCCAGCCGTCATCGCCAAGGCTTCTGCCATCCA...GCTGTATGTGCTGCGATTGTCCAGACAATGACAATGGCGATGGCACTGGGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS CCA 90 bp | GTAGATAATGGGATTGTGGATGGCAGAAGCCTTGGCGATGACGGCTaGCACCGAGCTCATGTAGGGCGTCAGGATGTGCGAGTATCCAGC | + |
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Preference number: 5 (lower is better) Translates to: VDNGIVDGRSLGDDG*HRAHVGRQDVRVSS Trigger: GCTGGATACTCGCACATCCTGACGCCCTACATGAGCTCGGTGCCAGCCGTCATCGCCAAGGCTTCTGCCATCCACAATCCCATTATCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS-3UTR CAA 90 bp | TCCTGTGCCTTGTCAGATCCACATCTGGAAGGAACTTGGACCGCTAACATGGAACTGGGGAGGTGTCCCTaGGTCTGGGGGCTGGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: SCALSDPHLEGTWTANMELGRCP*VWGLEE Trigger: CTCTTCCAGCCCCCAGACCAAGGGACACCTCCCCAG...TTCCATGTTAGCGGTCCAAGTTCCTTCCAGATGTGGATCTGACAAGGCACAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR CAA 90 bp | CCCACACAACACAGAGGCATCACAGTGACAGAGAGCATATATGCCAGGAACATGTGGATGGCAGAAGCCTaGGCGATGACGGCTGGCACC | + |
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Preference number: 5 (lower is better) Translates to: PTQHRGITVTESIYARNMWMAEA*AMTAGT Trigger: GGTGCCAGCCGTCATCGCCAAGGCTTCTGCCATCCA...CATGTTCCTGGCATATATGCTCTCTGTCACTGTGATGCCTCTGTGTTGTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CAA 90 bp | GAAAGGGGCCGGAGATTCGTATCCAGTGTGGCACGAGTGACAGGAACACCTTCAGGGCTGGAAGAGGCCTaGAGTTCTCCATCTTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: ERGRRFVSSVARVTGTPSGLEEA*SSPSSR Trigger: CCTAGAAGATGGAGAACTCAAGGCCTCTTCCAGCCC...TGAAGGTGTTCCTGTCACTCGTGCCACACTGGATACGAATCTCCGGCCCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS CCA 90 bp | ACATCATCCTCTAGGAAAGCAAGGGGAAACTGGGATGTATGGGGATaGGGACACTCTGAGAGGCCTGTGCACACAGCAAGCCTGCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: TSSSRKARGNWDVWG*GHSERPVHTASLPF Trigger: GAAAGGCAGGCTTGCTGTGTGCACAGGCCTCTCAGAGTGTCCCCATCCCCATACATCCCAGTTTCCCCTTGCTTTCCTAGAGGATGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CAA 90 bp | GCACTGGAGCTGACAGCTGGCCTTCTTTTAATAGCTACAAGTGTTCTCCTCGGTGGGCTGGAAGAGGCCTaGAGTTCTCCATCTTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: ALELTAGLLLIATSVLLGGLEEA*SSPSSR Trigger: CCTAGAAGATGGAGAACTCAAGGCCTCTTCCAGCCC...ACCGAGGAGAACACTTGTAGCTATTAAAAGAAGGCCAGCTGTCAGCTCCAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CAA 90 bp | TGTCATGCGCAGAGCTACACAGTCACATGCAGATATTCCCCTAGATACAGATCACACCCCTTAGGCTACTaGGCCTGGCTCCCTGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: CHAQSYTVTCRYSPRYRSHPLGY*AWLPVL Trigger: AAGGACAGGGAGCCAGGCCAAGTAGCCTAAGGGGTG...TGATCTGTATCTAGGGGAATATCTGCATGTGACTGTGTAGCTCTGCGCATGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CAA 90 bp | AGATTCGTATCCAGTGTGGCACGAGTGACAGGAACACCTTCAAAGCTTCCAGGCAGCTTGACAAGACTCTaGGTCCTGAAGGAGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: RFVSSVARVTGTPSKLPGSLTRL*VLKESP Trigger: TGGACTCTCCTTCAGGACCAAGAGTCTTGTCAAGCT...GCCTGGAAGCTTTGAAGGTGTTCCTGTCACTCGTGCCACACTGGATACGAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR CAA 90 bp | CATGTACATGTGAGTGTGGGCCACAGTGAGAATGCTATGGGAGGAGCTAGAGGCGATCCTGAGTTAAGCTaGACAAGACTCTTGGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: HVHVSVGHSENAMGGARGDPELS*TRLLVL Trigger: CAGGACCAAGAGTCTTGTCAAGCTTAACTCAGGATC...GCCTCTAGCTCCTCCCATAGCATTCTCACTGTGGCCCACACTCACATGTACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS-3UTR CAA 90 bp | TGTCATGCGCAGAGCTACACAGTCACATGCAGATATTCCCCTAGATACAGATCAGCCGTTCCAAATGCCTaGCAGGGCAGGACTGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: CHAQSYTVTCRYSPRYRSAVPNA*QGRTGC Trigger: ACAACCAGTCCTGCCCTGCAAGGCATTTGGAACGGC...TGATCTGTATCTAGGGGAATATCTGCATGTGACTGTGTAGCTCTGCGCATGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CAA 90 bp | TCACACTCTGTCACCCACACAACACAGAGGCATCACAGTGACAGAGAGCATATACTGGGTCCAGGCACCTaGGGAGTCTTAGATCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SHSVTHTTQRHHSDREHILGPGT*GVLDLC Trigger: ACAGAGATCTAAGACTCCCAAGGTGCCTGGACCCAG...TATATGCTCTCTGTCACTGTGATGCCTCTGTGTTGTGTGGGTGACAGAGTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CAA 90 bp | CTCTACATATACATATGGTACAACATAGCTGACAGCATGTCATGCGCAGAGCTAAGAAGGACTGTCCACTaGCTTGCTGGGCAGCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: LYIYIWYNIADSMSCAELRRTVH*LAGQLP Trigger: GGGGAGCTGCCCAGCAAGCAAGTGGACAGTCCTTCT...TAGCTCTGCGCATGACATGCTGTCAGCTATGTTGTACCATATGTATATGTAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CAA 90 bp | CTCTACATATACATATGGTACAACATAGCTGACAGCATGTCATGCGCAGAGCTAAGCTTGACAAGACTCTaGGTCCTGAAGGAGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: LYIYIWYNIADSMSCAELSLTRL*VLKESP Trigger: TGGACTCTCCTTCAGGACCAAGAGTCTTGTCAAGCT...TAGCTCTGCGCATGACATGCTGTCAGCTATGTTGTACCATATGTATATGTAGAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS-3UTR CAA 90 bp | GCCACATATCTTCAAGGGCACATAAGTTATATGCATACTCTACATATACATATGGATCCTGAGTTAAGCTaGACAAGACTCTTGGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: ATYLQGHISYMHTLHIHMDPELS*TRLLVL Trigger: CAGGACCAAGAGTCTTGTCAAGCTTAACTCAGGATC...CATATGTATATGTAGAGTATGCATATAACTTATGTGCCCTTGAAGATATGTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS GCA 72 bp | ACAATCAGTGCGACCTTGGCCATCTTCCACTCACTCTaGAGCCGCTGCCACTGCCGCCTCTGCCGCAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: TISATLAIFHSL*SRCHCRLCRRG Trigger: CCCTCTGCGGCAGAGGCGGCAGTGGCAGCGGCTGCAGAGTGAGTGGAAGATGGCCAAGGTCGCACTGATTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS CCA 72 bp | CCCCTCGGGCACGTAGGCACTCCAACCAAAGAAAGGTaGCAGACTCCAGGCCAGGGCATAAAGCCAGACGCC | + |
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Preference number: 6 (lower is better) Translates to: PLGHVGTPTKER*QTPGQGIKPDA Trigger: GGCGTCTGGCTTTATGCCCTGGCCTGGAGTCTGCCACCTTTCTTTGGTTGGAGTGCCTACGTGCCCGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS GCA 72 bp | GGGGACACTCTGAGAGGCCTGTGCACACAGCAAGCCTaGCTTTCTGGTCACCCCTTAGGCTACTTGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GDTLRGLCTQQA*LSGHPLGYLAW Trigger: CCAGGCCAAGTAGCCTAAGGGGTGACCAGAAAGGCAGGCTTGCTGTGTGCACAGGCCTCTCAGAGTGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS CCA 72 bp | GGGATTGTGGATGGCAGAAGCCTTGGCGATGACGGCTaGCACCGAGCTCATGTAGGGCGTCAGGATGTGCGA | + |
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Preference number: 6 (lower is better) Translates to: GIVDGRSLGDDG*HRAHVGRQDVR Trigger: TCGCACATCCTGACGCCCTACATGAGCTCGGTGCCAGCCGTCATCGCCAAGGCTTCTGCCATCCACAATCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS TCA 72 bp | CCAGGGACTCTTGACGCTTCCGTCCAGAGATCCAGCTaGGGTCTGAGGACTGGCTGCTCAATGTGGAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: PGTLDASVQRSS*GLRTGCSMWSG Trigger: ACCGCTCCACATTGAGCAGCCAGTCCTCAGACCTCAGCTGGATCTCTGGACGGAAGCGTCAAGAGTCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS CAA 90 bp | AGAAGGACTGTCCACTTGCTTGCTGGGCAGCTCCCCATGCAGCGGTaGTTTCTGTGTCTGTCCAGCCCACTTCACTCTCAGAACCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RRTVHLLAGQLPMQR*FLCLSSPLHSQNPG Trigger: CCCTGGGTTCTGAGAGTGAAGTGGGCTGGACAGACACAGAAACAACCGCTGCATGGGGAGCTGCCCAGCAAGCAAGTGGACAGTCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS GCA 72 bp | GAAGGACTGTCCACTTGCTTGCTGGGCAGCTCCCCATaGAGCGGTTGTTTCTGTGTCTGTCCAGCCCACTTC | + |
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Preference number: 6 (lower is better) Translates to: EGLSTCLLGSSP*SGCFCVCPAHF Trigger: GAAGTGGGCTGGACAGACACAGAAACAACCGCTGCATGGGGAGCTGCCCAGCAAGCAAGTGGACAGTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS CCA 72 bp | ATCCCGAGATCCAGACTGGGGAGGTGTCCCTTGGTCTaGGGGCTGGAAGAGGCCTTGAGTTCTCCATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: IPRSRLGRCPLV*GLEEALSSPSS Trigger: AGAAGATGGAGAACTCAAGGCCTCTTCCAGCCCCCAGACCAAGGGACACCTCCCCAGTCTGGATCTCGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS CAA 72 bp | GTCCACTTGCTTGCTGGGCAGCTCCCCATGCAGCGGTaGTTTCTGTGTCTGTCCAGCCCACTTCACTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VHLLAGQLPMQR*FLCLSSPLHSQ Trigger: CTGAGAGTGAAGTGGGCTGGACAGACACAGAAACAACCGCTGCATGGGGAGCTGCCCAGCAAGCAAGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS TCA 72 bp | GAGGCTGCTGGCAAAGAAGACCGGGGCCTGAGTGACTaGCATGAGGAAGTCGCTGACTGCGAGGTTGATGAT | + |
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Preference number: 6 (lower is better) Translates to: EAAGKEDRGLSD*HEEVADCEVDD Trigger: ATCATCAACCTCGCAGTCAGCGACTTCCTCATGTCAGTCACTCAGGCCCCGGTCTTCTTTGCCAGCAGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS TCA 72 bp | AGAAGAGCAGCATGGTGTAGGCACGCACCTGGGGTGTaGAGGTCATGTAGTCCCAGGAGCAGGATGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RRAAWCRHAPGV*RSCSPRSRMSA Trigger: TGCTGACATCCTGCTCCTGGGACTACATGACCTTCACACCCCAGGTGCGTGCCTACACCATGCTGCTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS TCA 72 bp | GGAGGTGTCCCTTGGTCTGGGGGCTGGAAGAGGCCTTaGGTTCTCCATCTTCTAGGTTCTGACTGCAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GGVPWSGGWKRP*VLHLLGSDCRR Trigger: CCTTCTGCAGTCAGAACCTAGAAGATGGAGAACTCAAGGCCTCTTCCAGCCCCCAGACCAAGGGACACCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168444.9 |
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| CDS CCA 72 bp | CGTTCGTCTTTTGGATCCCCTGCCGATGGTGGCCAGTaGACGTGTGATCACCAGATAGCGGTCCATGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: RSSFGSPADGGQ*TCDHQIAVHGY Trigger: ATAGCCATGGACCGCTATCTGGTGATCACACGTCCACTGGCCACCATCGGCAGGGGATCCAAAAGACGAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS GCA 72 bp | AGCCCAGGACAGCACGAAGAGAAGAATGACAATCAGTaGGACCTTGGCCATCTTCCACTCACTCTGCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: SPGQHEEKNDNQ*DLGHLPLTLQP Trigger: CGGCTGCAGAGTGAGTGGAAGATGGCCAAGGTCGCACTGATTGTCATTCTTCTCTTCGTGCTGTCCTGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS CCA 72 bp | GGTCCAGGCACCTTGGGAGTCTTAGATCTCTGTACCTaGGGGCTGGAAGAGGCCTTGAGTTCTCCATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GPGTLGVLDLCT*GLEEALSSPSS Trigger: AGAAGATGGAGAACTCAAGGCCTCTTCCAGCCCCCAGGTACAGAGATCTAAGACTCCCAAGGTGCCTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS CCA 72 bp | TCTAGGAAAGCAAGGGGAAACTGGGATGTATGGGGATaGGGACACTCTGAGAGGCCTGTGCACACAGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SRKARGNWDVWG*GHSERPVHTAS Trigger: GCTTGCTGTGTGCACAGGCCTCTCAGAGTGTCCCCATCCCCATACATCCCAGTTTCCCCTTGCTTTCCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS CAA 72 bp | TCTTACGGAGACGTTCTGAGTGCCGTTCCAAATGCCTaGCAGGGCAGGACTGGTTGTGAAGCTGGGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: SYGDVLSAVPNA*QGRTGCEAGIL Trigger: CAGGATCCCAGCTTCACAACCAGTCCTGCCCTGCAAGGCATTTGGAACGGCACTCAGAACGTCTCCGTAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS CAA 72 bp | GACAGCACGAAGAGAAGAATGACAATCAGTGCGACCTaGGCCATCTTCCACTCACTCTGCAGCCGCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: DSTKRRMTISAT*AIFHSLCSRCH Trigger: GTGGCAGCGGCTGCAGAGTGAGTGGAAGATGGCCAAGGTCGCACTGATTGTCATTCTTCTCTTCGTGCTGTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS TCA 72 bp | TGGAGTAGGGAGCCCAGGACAGCACGAAGAGAAGAATaGCAATCAGTGCGACCTTGGCCATCTTCCACTCAC | + |
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Preference number: 6 (lower is better) Translates to: WSREPRTARREE*QSVRPWPSSTH Trigger: GTGAGTGGAAGATGGCCAAGGTCGCACTGATTGTCATTCTTCTCTTCGTGCTGTCCTGGGCTCCCTACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS CCA 72 bp | TCATCCTCTAGGAAAGCAAGGGGAAACTGGGATGTATaGGGATGGGGACACTCTGAGAGGCCTGTGCACACA | + |
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Preference number: 6 (lower is better) Translates to: SSSRKARGNWDV*GWGHSERPVHT Trigger: TGTGTGCACAGGCCTCTCAGAGTGTCCCCATCCCCATACATCCCAGTTTCCCCTTGCTTTCCTAGAGGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022331.3 |
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| CDS CAA 72 bp | CATCTTCTAGGTTCTGACTGCAGAAGGACTGTCCACTaGCTTGCTGGGCAGCTCCCCATGCAGCGGTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: HLLGSDCRRTVH*LAGQLPMQRLF Trigger: AAACAACCGCTGCATGGGGAGCTGCCCAGCAAGCAAGTGGACAGTCCTTCTGCAGTCAGAACCTAGAAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS TCA 72 bp | CCTTGCAGGGCAGGACTGGTTGTGAAGCTGGGATCCTaGGTTAAGCTTGACAAGACTCTTGGTCCTGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: PCRAGLVVKLGS*VKLDKTLGPEG Trigger: TCCTTCAGGACCAAGAGTCTTGTCAAGCTTAACTCAGGATCCCAGCTTCACAACCAGTCCTGCCCTGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS TCA 72 bp | TGCCGTTCCAAATGCCTTGCAGGGCAGGACTGGTTGTaGAGCTGGGATCCTGAGTTAAGCTTGACAAGACTC | + |
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Preference number: 6 (lower is better) Translates to: CRSKCLAGQDWL*SWDPELSLTRL Trigger: GAGTCTTGTCAAGCTTAACTCAGGATCCCAGCTTCACAACCAGTCCTGCCCTGCAAGGCATTTGGAACGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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| CDS TCA 72 bp | CTGGAAGAGGCCTTGAGTTCTCCATCTTCTAGGTTCTaGCTGCAGAAGGACTGTCCACTTGCTTGCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LEEALSSPSSRF*LQKDCPLACWA Trigger: TGCCCAGCAAGCAAGTGGACAGTCCTTCTGCAGTCAGAACCTAGAAGATGGAGAACTCAAGGCCTCTTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022331.3 ENSMUST00000168444.9 |
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