Pregenerated sensors for OPN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026525Ensembl transcript IDs: ENSMUST00000027809.8
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCATTCAAATATTAAATCCTGGCATAGTAGACGATGACGCCAGATaGTCATCTTGTGCCACCAGGAGGTTCTCAAGTTATAAAGCACCC | + |
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Preference number: 1 (lower is better) Translates to: VIQILNPGIVDDDAR*SSCATRRFSSYKAP Trigger: GGGTGCTTTATAACTTGAGAACCTCCTGGTGGCACAAGATGAGCATCTGGCGTCATCGTCTACTATGCCAGGATTTAATATTTGAATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGGTCAAACACACAACATGGCACAGAACAGGACTCAACACCGCAACGTACTCCACTATTACACCAAATaGGGACTCTGGGGCACTCCT | + |
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Preference number: 2 (lower is better) Translates to: IGQTHNMAQNRTQHRNVLHYYTK*GLWGTP Trigger: AGGAGTGCCCCAGAGTCCCCATTTGGTGTAATAGTG...GAGTACGTTGCGGTGTTGAGTCCTGTTCTGTGCCATGTTGTGTGTTTGACCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| 3UTR CCA 72 bp | ACAGGGCCACAGAGGTTCTGTCACTATTACACCAAATaGGGACTCTGGGGCACTCCTGACAGGAACATTGTG | + |
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Preference number: 3 (lower is better) Translates to: TGPQRFCHYYTK*GLWGTPDRNIV Trigger: CACAATGTTCCTGTCAGGAGTGCCCCAGAGTCCCCATTTGGTGTAATAGTGACAGAACCTCTGTGGCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| 3UTR CCA 72 bp | GTCTTGCTCAGTCGCTTCTTGAATACAGACAACATGTaGGTGATTCGGATTTCCCACAGGGCCACAGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: VLLSRFLNTDNM*VIRISHRATEV Trigger: AACCTCTGTGGCCCTGTGGGAAATCCGAATCACCCACATGTTGTCTGTATTCAAGAAGCGACTGAGCAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| 3UTR-3UTR CAA 90 bp | GTCAAACACACAACATGGCACAGAACAGGACTCAACACCGCAACGTACTCCAGATTGCTCAGTCGCTTCTaGAATACAGACAACATGTGG | + |
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Preference number: 3 (lower is better) Translates to: VKHTTWHRTGLNTATYSRLLSRF*NTDNMW Trigger: CCACATGTTGTCTGTATTCAAGAAGCGACTGAGCAA...TCTGGAGTACGTTGCGGTGTTGAGTCCTGTTCTGTGCCATGTTGTGTGTTTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| 3UTR TCA 72 bp | AGTCATTCAAATATTAAATCCTGGCATAGTAGACGATaGCGCCAGATGCTCATCTTGTGCCACCAGGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: SHSNIKSWHSRR*RQMLILCHQEV Trigger: AACCTCCTGGTGGCACAAGATGAGCATCTGGCGTCATCGTCTACTATGCCAGGATTTAATATTTGAATGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR TCA 90 bp | ACGCCAGATGCTCATCTTGTGCCACCAGGAGGTTCTCAAGTTATAAAGCACCCACGTAGCAATGGGCTATaGTGCCCACGGGCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: TPDAHLVPPGGSQVIKHPRSNGL*CPRAPP Trigger: TGGTGGTGCCCGTGGGCATCATAGCCCATTGCTACG...TGGGTGCTTTATAACTTGAGAACCTCCTGGTGGCACAAGATGAGCATCTGGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR TCA 90 bp | ATAGTAGACGATGACGCCAGATGCTCATCTTGTGCCACCAGGAGGTTCTCAAGTGGTGTCCATAGCCATTaGCCACCAAGAAGCGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: IVDDDARCSSCATRRFSSGVHSH*PPRSGS Trigger: TGACCCGCTTCTTGGTGGTCAATGGCTATGGACACC...ACTTGAGAACCTCCTGGTGGCACAAGATGAGCATCTGGCGTCATCGTCTACTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR GCA 90 bp | AATACAGTCATTCAAATATTAAATCCTGGCATAGTAGACGATGACGCCAGATGCGCAGCACCAGCAGGTTaGCGCCGACGCCCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: NTVIQILNPGIVDDDARCAAPAG*RRRPAA Trigger: CGCTGCTGGGCGTCGGCGGCAACCTGCTGGTGCTGC...GCATCTGGCGTCATCGTCTACTATGCCAGGATTTAATATTTGAATGACTGTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR CCA 90 bp | GTCAAACACACAACATGGCACAGAACAGGACTCAACACCGCAACGTACTCCAGATTTTTAGCAGGCCGCTaGCATCTCAGCAGGCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: VKHTTWHRTGLNTATYSRFLAGR*HLSRRK Trigger: CTTCCGCCTGCTGAGATGCCAGCGGCCTGCTAAAAA...TCTGGAGTACGTTGCGGTGTTGAGTCCTGTTCTGTGCCATGTTGTGTGTTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR TCA 90 bp | ATAAATTTAATTGGTCAAACACACAACATGGCACAGAACAGGACTCAACACCGCCGCCCAGGCTCAGGTTaGCCAGGAAGAGGTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: INLIGQTHNMAQNRTQHRRPGSG*PGRGGW Trigger: CCACCCACCTCTTCCTGGTCAACCTGAGCCTGGGCG...GCGGTGTTGAGTCCTGTTCTGTGCCATGTTGTGTGTTTGACCAATTAAATTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR GCA 90 bp | TTTGTCTTGCTCAGTCGCTTCTTGAATACAGACAACATGTGGGTGATTCGGATTCCAGCCCAGGAGAGGTaGTCCTGCCCATGCCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: FVLLSRFLNTDNMWVIRIPAQER*SCPCQG Trigger: TCCTTGGCATGGGCAGGAGCACCTCTCCTGGGCTGG...AATCCGAATCACCCACATGTTGTCTGTATTCAAGAAGCGACTGAGCAAGACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR GCA 90 bp | ATTGGTCAAACACACAACATGGCACAGAACAGGACTCAACACCGCAACGTACTCCGGAAGCATAGGAGCTaGAGAAGGGACCTCCGAAAC | + |
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Preference number: 4 (lower is better) Translates to: IGQTHNMAQNRTQHRNVLRKHRS*RRDLRN Trigger: GTTTCGGAGGTCCCTTCTGCAGCTCCTATGCTTCCG...GAGTACGTTGCGGTGTTGAGTCCTGTTCTGTGCCATGTTGTGTGTTTGACCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR CCA 90 bp | ATAGTAGACGATGACGCCAGATGCTCATCTTGTGCCACCAGGAGGTTCTCAAGTAGTCGTTGGCATCCTTaGATCTCCAGTCCACGGTAC | + |
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Preference number: 4 (lower is better) Translates to: IVDDDARCSSCATRRFSSSRWHP*ISSPRY Trigger: GTACCGTGGACTGGAGATCCAAGGATGCCAACGACT...ACTTGAGAACCTCCTGGTGGCACAAGATGAGCATCTGGCGTCATCGTCTACTAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR TCA 90 bp | ATAGTAGACGATGACGCCAGATGCTCATCTTGTGCCACCAGGAGGTTCTCAAGTAGGCCCAGGAAAAGTTaGTCACTCTGGCATGTACCA | + |
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Preference number: 4 (lower is better) Translates to: IVDDDARCSSCATRRFSSRPRKS*SLWHVP Trigger: TGGTACATGCCAGAGTGATCAACTTTTCCTGGGCCT...ACTTGAGAACCTCCTGGTGGCACAAGATGAGCATCTGGCGTCATCGTCTACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR TCA 90 bp | GTCAAACACACAACATGGCACAGAACAGGACTCAACACCGCAACGTACTCCAGAAAGGCATCCAGCAGGTaGGAAAGACAAAGGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: VKHTTWHRTGLNTATYSRKASSR*ERQRPS Trigger: TGATGGCCTTTGTCTTTCTCACCTGCTGGATGCCTT...TCTGGAGTACGTTGCGGTGTTGAGTCCTGTTCTGTGCCATGTTGTGTGTTTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR TCA 90 bp | AGATGCTCATCTTGTGCCACCAGGAGGTTCTCAAGTTATAAAGCACCCATTGAGGTCCCCATCTTTCTGTaGCATCACGATGGGCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: RCSSCATRRFSSYKAPIEVPIFL*HHDGPD Trigger: ATCAGGCCCATCGTGATGTCACAGAAAGATGGGGAC...CTCAATGGGTGCTTTATAACTTGAGAACCTCCTGGTGGCACAAGATGAGCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR CCA 90 bp | TGCTCATCTTGTGCCACCAGGAGGTTCTCAAGTTATAAAGCACCCATTGAGTTATTCACTCTCAGCCGCTaGGAGGTTTTTAGCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: CSSCATRRFSSYKAPIELFTLSR*EVFSRP Trigger: CGGCCTGCTAAAAACCTCCCAGCGGCTGAGAGTGAA...TAACTCAATGGGTGCTTTATAACTTGAGAACCTCCTGGTGGCACAAGATGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR TCA 90 bp | TTTGTCTTGCTCAGTCGCTTCTTGAATACAGACAACATGTGGGTGATTCGGATTTGGACACAGTTGGGGTaGCCAGGTGTCCATAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: FVLLSRFLNTDNMWVIRIWTQLG*PGVHSH Trigger: ATGGCTATGGACACCTGGTCACCCCAACTGTGTCCA...AATCCGAATCACCCACATGTTGTCTGTATTCAAGAAGCGACTGAGCAAGACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR GCA 90 bp | TTTGTCTTGCTCAGTCGCTTCTTGAATACAGACAACATGTGGGTGATTCGGATTAGGTGCTCCTGCCCATaGCAAGGAGTAGAGCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: FVLLSRFLNTDNMWVIRIRCSCP*QGVEPD Trigger: ATCTGGCTCTACTCCTTGGCATGGGCAGGAGCACCT...AATCCGAATCACCCACATGTTGTCTGTATTCAAGAAGCGACTGAGCAAGACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR CCA 90 bp | CGCTTCTTGAATACAGACAACATGTGGGTGATTCGGATTTCCCACAGGGCCACAGAAGATGTAGATAACTaGGTTGTACACAGTGCTCGA | + |
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Preference number: 4 (lower is better) Translates to: RFLNTDNMWVIRISHRATEDVDN*VVHSAR Trigger: TCGAGCACTGTGTACAACCCAGTTATCTACATCTTC...TGTGGCCCTGTGGGAAATCCGAATCACCCACATGTTGTCTGTATTCAAGAAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR TCA 90 bp | ATAGTAGACGATGACGCCAGATGCTCATCTTGTGCCACCAGGAGGTTCTCAAGTCATATCTTAGCATCTTaGTCACTTGAATGGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: IVDDDARCSSCATRRFSSHILAS*SLEWSE Trigger: TTCAGACCATTCAAGTGATCAAGATGCTAAGATATG...ACTTGAGAACCTCCTGGTGGCACAAGATGAGCATCTGGCGTCATCGTCTACTAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR GCA 90 bp | ACAGTCATTCAAATATTAAATCCTGGCATAGTAGACGATGACGCCAGATGCTCAGACATCGACCTTAGATaGGCTGCTTCTGTCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: TVIQILNPGIVDDDARCSDIDLR*AASVTV Trigger: GACAGTGACAGAAGCAGCGCATCTAAGGTCGATGTC...TGAGCATCTGGCGTCATCGTCTACTATGCCAGGATTTAATATTTGAATGACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS TCA 90 bp | CGAGGCAGCCGAGTAGCAGCGCCAGGCGCTCGTACGCGGTGGGGCTaGAGAGAGGCGCGGGGCTCCGCGTGCCCGCCGGTGCTGCGCCCT | + |
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Preference number: 5 (lower is better) Translates to: RGSRVAAPGARTRWG*REARGSACPPVLRP Trigger: AGGGCGCAGCACCGGCGGGCACGCGGAGCCCCGCGCCTCTCTTCAGCCCCACCGCGTACGAGCGCCTGGCGCTGCTACTCGGCTGCCTCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS GCA 90 bp | TTTGGCCTGTCCCCATCTTTCTGTGACATCACGATGGGCCTGATGTaGATTTCACTCTCAGCCGCTGGGAGGTTTTTAGCAGGCCGCTGG | + |
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Preference number: 5 (lower is better) Translates to: FGLSPSFCDITMGLM*ISLSAAGRFLAGRW Trigger: CCAGCGGCCTGCTAAAAACCTCCCAGCGGCTGAGAGTGAAATGCACATCAGGCCCATCGTGATGTCACAGAAAGATGGGGACAGGCCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS TCA 90 bp | GAAGCATTCGAACAGAATAGAGAATGTGGCCGTAGCAATGGGCTATaGTGCCCACGGGCACCACCAGGCAGCCGAGAAACAGGAAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: EAFEQNRECGRSNGL*CPRAPPGSRETGRA Trigger: TGCTCTTCCTGTTTCTCGGCTGCCTGGTGGTGCCCGTGGGCATCATAGCCCATTGCTACGGCCACATTCTCTATTCTGTTCGAATGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR CAA 90 bp | CGCTTCTTGAATACAGACAACATGTGGGTGATTCGGATTTCCCACAGGGCCACAGAGTCGTTGGCATCCTaGGATCTCCAGTCCACGGTA | + |
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Preference number: 5 (lower is better) Translates to: RFLNTDNMWVIRISHRATESLAS*DLQSTV Trigger: TACCGTGGACTGGAGATCCAAGGATGCCAACGACTC...TGTGGCCCTGTGGGAAATCCGAATCACCCACATGTTGTCTGTATTCAAGAAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR CAA 90 bp | ACGCCAGATGCTCATCTTGTGCCACCAGGAGGTTCTCAAGTTATAAAGCACCCACAGGCCCAGGAAAAGTaGATCACTCTGGCATGTACC | + |
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Preference number: 5 (lower is better) Translates to: TPDAHLVPPGGSQVIKHPQAQEK*ITLACT Trigger: GGTACATGCCAGAGTGATCAACTTTTCCTGGGCCTG...TGGGTGCTTTATAACTTGAGAACCTCCTGGTGGCACAAGATGAGCATCTGGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS CCA 90 bp | CACAGTGCTCGATTTAGCAAAGAGATAAGAAACAATGGACACAGTTaGGGTGACCAGGTGTCCATAGCCATTGACCACCAAGAAGCGGGT | + |
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Preference number: 5 (lower is better) Translates to: HSARFSKEIRNNGHS*GDQVSIAIDHQEAG Trigger: ACCCGCTTCTTGGTGGTCAATGGCTATGGACACCTGGTCACCCCAACTGTGTCCATTGTTTCTTATCTCTTTGCTAAATCGAGCACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS TCA 90 bp | GATGACATCGACCTTAGATGCGCTGCTTCTGTCACTGTCCTCGACTaGCAGGGACTCATCACTGGTGATGATAAAGATGATAGAGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: DDIDLRCAASVTVLD*QGLITGDDKDDRGR Trigger: TCTTCCTCTATCATCTTTATCATCACCAGTGATGAGTCCCTGTCAGTCGAGGACAGTGACAGAAGCAGCGCATCTAAGGTCGATGTCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS-3UTR CAA 90 bp | AGATGCTCATCTTGTGCCACCAGGAGGTTCTCAAGTTATAAAGCACCCATTGAGAGGTCACTTTCTTCTTaGGCCTGTCCCCATCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: RCSSCATRRFSSYKAPIERSLSS*ACPHLS Trigger: AGAAAGATGGGGACAGGCCAAAGAAGAAAGTGACCT...CTCAATGGGTGCTTTATAACTTGAGAACCTCCTGGTGGCACAAGATGAGCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS CCA 90 bp | CAGAAGGGACCTCCGAAACTTTCTGTTCATGAAGATGTAGATAACTaGGTTGTACACAGTGCTCGATTTAGCAAAGAGATAAGAAACAAT | + |
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Preference number: 5 (lower is better) Translates to: QKGPPKLSVHEDVDN*VVHSARFSKEIRNN Trigger: ATTGTTTCTTATCTCTTTGCTAAATCGAGCACTGTGTACAACCCAGTTATCTACATCTTCATGAACAGAAAGTTTCGGAGGTCCCTTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS GCA 72 bp | GCTGAAGAGAGGCGCGGGGCTCCGCGTGCCCGCCGGTaGTGCGCCCTCGGCGCCCGCCCCGTCCTCCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: AEERRGAPRARR*CALGARPVLPV Trigger: TACTGGGAGGACGGGGCGGGCGCCGAGGGCGCAGCACCGGCGGGCACGCGGAGCCCCGCGCCTCTCTTCAGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS CCA 72 bp | GGAAGAGGTGGGTGGGCGTGCGCAGTCTCGGGAACTTaGAGTAGAGAAGCAGCACCAGCAGGTTGCCGCCGA | + |
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Preference number: 6 (lower is better) Translates to: GRGGWACAVSGT*SREAAPAGCRR Trigger: TCGGCGGCAACCTGCTGGTGCTGCTTCTCTACTCCAAGTTCCCGAGACTGCGCACGCCCACCCACCTCTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS CCA 72 bp | CACGATGGGCCTGATGTGCATTTCACTCTCAGCCGCTaGGAGGTTTTTAGCAGGCCGCTGGCATCTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: HDGPDVHFTLSR*EVFSRPLASQQ Trigger: CTGCTGAGATGCCAGCGGCCTGCTAAAAACCTCCCAGCGGCTGAGAGTGAAATGCACATCAGGCCCATCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS GCA 72 bp | GGCCGCTGGCATCTCAGCAGGCGGAAGCATAGGAGCTaGAGAAGGGACCTCCGAAACTTTCTGTTCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: GRWHLSRRKHRS*RRDLRNFLFMK Trigger: CTTCATGAACAGAAAGTTTCGGAGGTCCCTTCTGCAGCTCCTATGCTTCCGCCTGCTGAGATGCCAGCGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS TCA 72 bp | GAACAGAATAGAGAATGTGGCCGTAGCAATGGGCTATaGTGCCCACGGGCACCACCAGGCAGCCGAGAAACA | + |
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Preference number: 6 (lower is better) Translates to: EQNRECGRSNGL*CPRAPPGSRET Trigger: TGTTTCTCGGCTGCCTGGTGGTGCCCGTGGGCATCATAGCCCATTGCTACGGCCACATTCTCTATTCTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS TCA 72 bp | GCCTGTCCCCATCTTTCTGTGACATCACGATGGGCCTaGTGTGCATTTCACTCTCAGCCGCTGGGAGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: ACPHLSVTSRWA*CAFHSQPLGGF Trigger: AAAACCTCCCAGCGGCTGAGAGTGAAATGCACATCAGGCCCATCGTGATGTCACAGAAAGATGGGGACAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS CCA 72 bp | ACAGGAAGAGCACAAAGGAAGAGTCGTTGGCATCCTTaGATCTCCAGTCCACGGTACAGCCCAGTCCATGTA | + |
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Preference number: 6 (lower is better) Translates to: TGRAQRKSRWHP*ISSPRYSPVHV Trigger: TACATGGACTGGGCTGTACCGTGGACTGGAGATCCAAGGATGCCAACGACTCTTCCTTTGTGCTCTTCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS CAA 72 bp | AACAGGAAGAGCACAAAGGAAGAGTCGTTGGCATCCTaGGATCTCCAGTCCACGGTACAGCCCAGTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: NRKSTKEESLAS*DLQSTVQPSPC Trigger: ACATGGACTGGGCTGTACCGTGGACTGGAGATCCAAGGATGCCAACGACTCTTCCTTTGTGCTCTTCCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS GCA 72 bp | TCCCCATCTTTCTGTGACATCACGATGGGCCTGATGTaGATTTCACTCTCAGCCGCTGGGAGGTTTTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: SPSFCDITMGLM*ISLSAAGRFLA Trigger: TGCTAAAAACCTCCCAGCGGCTGAGAGTGAAATGCACATCAGGCCCATCGTGATGTCACAGAAAGATGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS TCA 72 bp | GACCTTAGATGCGCTGCTTCTGTCACTGTCCTCGACTaGCAGGGACTCATCACTGGTGATGATAAAGATGAT | + |
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Preference number: 6 (lower is better) Translates to: DLRCAASVTVLD*QGLITGDDKDD Trigger: ATCATCTTTATCATCACCAGTGATGAGTCCCTGTCAGTCGAGGACAGTGACAGAAGCAGCGCATCTAAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS CCA 72 bp | CGATTTAGCAAAGAGATAAGAAACAATGGACACAGTTaGGGTGACCAGGTGTCCATAGCCATTGACCACCAA | + |
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Preference number: 6 (lower is better) Translates to: RFSKEIRNNGHS*GDQVSIAIDHQ Trigger: TTGGTGGTCAATGGCTATGGACACCTGGTCACCCCAACTGTGTCCATTGTTTCTTATCTCTTTGCTAAATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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| CDS CCA 72 bp | CCTCCGAAACTTTCTGTTCATGAAGATGTAGATAACTaGGTTGTACACAGTGCTCGATTTAGCAAAGAGATA | + |
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Preference number: 6 (lower is better) Translates to: PPKLSVHEDVDN*VVHSARFSKEI Trigger: TATCTCTTTGCTAAATCGAGCACTGTGTACAACCCAGTTATCTACATCTTCATGAACAGAAAGTTTCGGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027809.8 |
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