Pregenerated sensors for OPLAH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022562Ensembl transcript IDs: ENSMUST00000023222.13, ENSMUST00000164189.2, ENSMUST00000165279.2, ENSMUST00000171340.9, ENSMUST00000210024.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGAGCATTGGTGGCCACGGTGGTACCCATGCGGATGCTGGCGATGTaGCTGGTGTCTAGCGGCCGGCCTCGGGGCAGCAGCACACCCCTC | + |
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Preference number: 5 (lower is better) Translates to: RALVATVVPMRMLAM*LVSSGRPRGSSTPL Trigger: GAGGGGTGTGCTGCTGCCCCGAGGCCGGCCGCTAGACACCAGTCACATCGCCAGCATCCGCATGGGTACCACCGTGGCCACCAATGCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS CCA 90 bp | CATTGGTGGCCACGGTGGTACCCATGCGGATGCTGGCGATGTGACTaGTGTCTAGCGGCCGGCCTCGGGGCAGCAGCACACCCCTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: HWWPRWYPCGCWRCD*CLAAGLGAAAHPSP Trigger: AGGAGAGGGGTGTGCTGCTGCCCCGAGGCCGGCCGCTAGACACCAGTCACATCGCCAGCATCCGCATGGGTACCACCGTGGCCACCAATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS TCA 90 bp | GCTCTCCCCCGTGGAGGCCATAAGGCTGGAAGGCGCGGCGCTCCGTaGGGACAGACAGTAGCGCCTCTTCCCGAAAGACCAGCTCTCGGA | + |
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Preference number: 5 (lower is better) Translates to: ALPRGGHKAGRRGAP*GQTVAPLPERPALG Trigger: TCCGAGAGCTGGTCTTTCGGGAAGAGGCGCTACTGTCTGTCCTCACGGAGCGCCGCGCCTTCCAGCCTTATGGCCTCCACGGGGGAGAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS GCA 90 bp | GCCGTTCCAACAGAGCATTGGTGGCCACGGTGGTACCCATGCGGATaGTGGCGATGTGACTGGTGTCTAGCGGCCGGCCTCGGGGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: AVPTEHWWPRWYPCG*WRCDWCLAAGLGAA Trigger: TGCTGCCCCGAGGCCGGCCGCTAGACACCAGTCACATCGCCAGCATCCGCATGGGTACCACCGTGGCCACCAATGCTCTGTTGGAACGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS GCA 90 bp | CTCCCTGCCGTTCCAACAGAGCATTGGTGGCCACGGTGGTACCCATaGGGATGCTGGCGATGTGACTGGTGTCTAGCGGCCGGCCTCGGG | + |
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Preference number: 5 (lower is better) Translates to: LPAVPTEHWWPRWYP*GCWRCDWCLAAGLG Trigger: CCCGAGGCCGGCCGCTAGACACCAGTCACATCGCCAGCATCCGCATGGGTACCACCGTGGCCACCAATGCTCTGTTGGAACGGCAGGGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS CCA 90 bp | GACTACGCCATCACCTCCCCGGAAGCGGCCTCGGCCTCCAGAGCCTaGCCTCAGCTCAAAGCGGCGCAGGATAACTGGATACCGGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: DYAITSPEAASASRA*PQLKAAQDNWIPAL Trigger: GAGAGCCGGTATCCAGTTATCCTGCGCCGCTTTGAGCTGAGGCCAGGCTCTGGAGGCCGAGGCCGCTTCCGGGGAGGTGATGGCGTAGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS CCA 90 bp | GTTCCAACAGAGCATTGGTGGCCACGGTGGTACCCATGCGGATGCTaGCGATGTGACTGGTGTCTAGCGGCCGGCCTCGGGGCAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: VPTEHWWPRWYPCGC*RCDWCLAAGLGAAA Trigger: TGCTGCTGCCCCGAGGCCGGCCGCTAGACACCAGTCACATCGCCAGCATCCGCATGGGTACCACCGTGGCCACCAATGCTCTGTTGGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS CCA 90 bp | GAGGCGGGAACCCCCGCCAGCTGCCACCGTATTGATGTCCAGCTGTaGGGCCTGGAGGGTAACACCTGCCGTGCTAGCCTCAAAGACGTG | + |
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Preference number: 5 (lower is better) Translates to: EAGTPASCHRIDVQL*GLEGNTCRASLKDV Trigger: CACGTCTTTGAGGCTAGCACGGCAGGTGTTACCCTCCAGGCCCCACAGCTGGACATCAATACGGTGGCAGCTGGCGGGGGTTCCCGCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS GCA 90 bp | AGGTCTCGGAAACCGCGAGTCACCAGCAGTGCCACCCGTTCTCCCTaGCGTTCCAACAGAGCATTGGTGGCCACGGTGGTACCCATGCGG | + |
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Preference number: 5 (lower is better) Translates to: RSRKPRVTSSATRSP*RSNRALVATVVPMR Trigger: CCGCATGGGTACCACCGTGGCCACCAATGCTCTGTTGGAACGGCAGGGAGAACGGGTGGCACTGCTGGTGACTCGCGGTTTCCGAGACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS GCA 90 bp | AAGGAGACGTGCGTGAAGCCCAGCTCCCGGGCCAGTGTGCCCACCTaGTGCTCGTGCTGGGCCCACGTGTACGAATGCATGAGTACCACT | + |
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Preference number: 5 (lower is better) Translates to: KETCVKPSSRASVPT*CSCWAHVYECMSTT Trigger: AGTGGTACTCATGCATTCGTACACGTGGGCCCAGCACGAGCAGCAGGTGGGCACACTGGCCCGGGAGCTGGGCTTCACGCACGTCTCCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS GCA 90 bp | TGCACAGTGTCCATACCCAGGGCCCGGGCAATGGCACAAGCGTGTTaGCCACCGGCTCCTCCAAAGCAAGCCAGTACATGGGCTGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: CTVSIPRARAMAQAC*PPAPPKQASTWAEG Trigger: CCCCTCAGCCCATGTACTGGCTTGCTTTGGAGGAGCCGGTGGGCAACACGCTTGTGCCATTGCCCGGGCCCTGGGTATGGACACTGTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CCA 90 bp | CCACCCGTTCTCCCTGCCGTTCCAACAGAGCATTGGTGGCCACGGTaGTACCCATGCGGATGCTGGCGATGTGACTGGTGTCTAGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: PPVLPAVPTEHWWPR*YPCGCWRCDWCLAA Trigger: GGCCGCTAGACACCAGTCACATCGCCAGCATCCGCATGGGTACCACCGTGGCCACCAATGCTCTGTTGGAACGGCAGGGAGAACGGGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS CCA 90 bp | GCACAAGCGTGTTGCCCACCGGCTCCTCCAAAGCAAGCCAGTACATaGGCTGAGGGGTCGTGGCCTCGTGCCTGTGTGAGGGCACGGATA | + |
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Preference number: 5 (lower is better) Translates to: AQACCPPAPPKQAST*AEGSWPRACVRARI Trigger: TATCCGTGCCCTCACACAGGCACGAGGCCACGACCCCTCAGCCCATGTACTGGCTTGCTTTGGAGGAGCCGGTGGGCAACACGCTTGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS TCA 90 bp | GCGGATGCCCTCTGTGGGTGCGTCTGCATAGTTGGCAGGATCCTCTaGGAGCAGCTTCAGGACACGTACATGCCCTCCTGGGCACTGGGC | + |
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Preference number: 5 (lower is better) Translates to: ADALCGCVCIVGRIL*EQLQDTYMPSWALG Trigger: GCCCAGTGCCCAGGAGGGCATGTACGTGTCCTGAAGCTGCTCTCAGAGGATCCTGCCAACTATGCAGACGCACCCACAGAGGGCATCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000165279.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS TCA 90 bp | ACCTCTGGCATGGGCACAGCCAGGTCAAAGAGGTCTGGGCGGGCCTaGGTGCCAATATGCAGCAGGTCTCGGAAACCGCGAGTCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: TSGMGTARSKRSGRA*VPICSRSRKPRVTS Trigger: GCTGGTGACTCGCGGTTTCCGAGACCTGCTGCATATTGGCACTCAGGCCCGCCCAGACCTCTTTGACCTGGCTGTGCCCATGCCAGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS TCA 90 bp | TGCTGGGCCCACGTGTACGAATGCATGAGTACCACTGCCAGGCTGTaGATGCCCCGAGTCAAGAGCCCCTCCAGCTTCCCACGCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: CWAHVYECMSTTARL*MPRVKSPSSFPRRA Trigger: AGCCCTGCGTGGGAAGCTGGAGGGGCTCTTGACTCGGGGCATTCACAGCCTGGCAGTGGTACTCATGCATTCGTACACGTGGGCCCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS TCA 90 bp | GGAAGCCTCGGCGGAAGCCCTGCACATAGCGCTGGATGGTGGGAGTaGGGTAAGCATCTGCACAGGCCGTATGCCCCCGAGGAACAATCC | + |
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Preference number: 5 (lower is better) Translates to: GSLGGSPAHSAGWWE*GKHLHRPYAPEEQS Trigger: GGATTGTTCCTCGGGGGCATACGGCCTGTGCAGATGCTTACCTCACTCCCACCATCCAGCGCTATGTGCAGGGCTTCCGCCGAGGCTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS TCA 90 bp | AGGACCCCCTTTGCGGTAGCAGGCAGGACCTGGGTGGGCACCTGCTaGCTCTGGACCAACCACAAAGAGGCCAGACCTGAAGAAGAGGCG | + |
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Preference number: 5 (lower is better) Translates to: RTPFAVAGRTWVGTC*LWTNHKEARPEEEA Trigger: CGCCTCTTCTTCAGGTCTGGCCTCTTTGTGGTTGGTCCAGAGTCAGCAGGTGCCCACCCAGGTCCTGCCTGCTACCGCAAAGGGGGTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS GCA 90 bp | CTGGCATGGGCACAGCCAGGTCAAAGAGGTCTGGGCGGGCCTGAGTaGCAATATGCAGCAGGTCTCGGAAACCGCGAGTCACCAGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: LAWAQPGQRGLGGPE*QYAAGLGNRESPAV Trigger: CACTGCTGGTGACTCGCGGTTTCCGAGACCTGCTGCATATTGGCACTCAGGCCCGCCCAGACCTCTTTGACCTGGCTGTGCCCATGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS GCA 90 bp | CTGCTGCTCGTGCTGGGCCCACGTGTACGAATGCATGAGTACCACTaGCAGGCTGTGAATGCCCCGAGTCAAGAGCCCCTCCAGCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: LLLVLGPRVRMHEYH*QAVNAPSQEPLQLP Trigger: GGGAAGCTGGAGGGGCTCTTGACTCGGGGCATTCACAGCCTGGCAGTGGTACTCATGCATTCGTACACGTGGGCCCAGCACGAGCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS GCA 90 bp | CACAAAGAGGCCAGACCTGAAGAAGAGGCGGGAACCCCCGCCAGCTaGCACCGTATTGATGTCCAGCTGTGGGGCCTGGAGGGTAACACC | + |
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Preference number: 5 (lower is better) Translates to: HKEARPEEEAGTPAS*HRIDVQLWGLEGNT Trigger: GGTGTTACCCTCCAGGCCCCACAGCTGGACATCAATACGGTGGCAGCTGGCGGGGGTTCCCGCCTCTTCTTCAGGTCTGGCCTCTTTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS GCA 90 bp | GGGCACGGAGATCCGACAGGTTGTCATGCAGGTTCCTGGTCCCACTaGAGCCAGAGATCTTGCCTGGGGCCTGTAAGGCCTCTGTCACCG | + |
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Preference number: 5 (lower is better) Translates to: GHGDPTGCHAGSWSH*SQRSCLGPVRPLSP Trigger: CGGTGACAGAGGCCTTACAGGCCCCAGGCAAGATCTCTGGCTGCAGTGGGACCAGGAACCTGCATGACAACCTGTCGGATCTCCGTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS CCA 90 bp | CCAGCAGTGCCACCCGTTCTCCCTGCCGTTCCAACAGAGCATTGGTaGCCACGGTGGTACCCATGCGGATGCTGGCGATGTGACTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: PAVPPVLPAVPTEHW*PRWYPCGCWRCDWC Trigger: ACACCAGTCACATCGCCAGCATCCGCATGGGTACCACCGTGGCCACCAATGCTCTGTTGGAACGGCAGGGAGAACGGGTGGCACTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS CCA 90 bp | TCACCAGCAGTGCCACCCGTTCTCCCTGCCGTTCCAACAGAGCATTaGTGGCCACGGTGGTACCCATGCGGATGCTGGCGATGTGACTGG | + |
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Preference number: 5 (lower is better) Translates to: SPAVPPVLPAVPTEH*WPRWYPCGCWRCDW Trigger: CCAGTCACATCGCCAGCATCCGCATGGGTACCACCGTGGCCACCAATGCTCTGTTGGAACGGCAGGGAGAACGGGTGGCACTGCTGGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS CCA 90 bp | CAGCACTCGCTCGTCCACCTCCACGACCTCCTCATACAGTACCTCTaGCATGGGCACAGCCAGGTCAAAGAGGTCTGGGCGGGCCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: QHSLVHLHDLLIQYL*HGHSQVKEVWAGLS Trigger: ACTCAGGCCCGCCCAGACCTCTTTGACCTGGCTGTGCCCATGCCAGAGGTACTGTATGAGGAGGTCGTGGAGGTGGACGAGCGAGTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS CCA 90 bp | CTGCCACCTGGGCACGGAGATCCGACAGGTTGTCATGCAGGTTCCTaGTCCCACTGCAGCCAGAGATCTTGCCTGGGGCCTGTAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LPPGHGDPTGCHAGS*SHCSQRSCLGPVRP Trigger: AGGCCTTACAGGCCCCAGGCAAGATCTCTGGCTGCAGTGGGACCAGGAACCTGCATGACAACCTGTCGGATCTCCGTGCCCAGGTGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS GCA 90 bp | TTCTGGTTAGCTGCCACCTGGGCACGGAGATCCGACAGGTTGTCATaGAGGTTCCTGGTCCCACTGCAGCCAGAGATCTTGCCTGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: FWLAATWARRSDRLS*RFLVPLQPEILPGA Trigger: GGCCCCAGGCAAGATCTCTGGCTGCAGTGGGACCAGGAACCTGCATGACAACCTGTCGGATCTCCGTGCCCAGGTGGCAGCTAACCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS CCA 90 bp | GAACCCCCGCCAGCTGCCACCGTATTGATGTCCAGCTGTGGGGCCTaGAGGGTAACACCTGCCGTGCTAGCCTCAAAGACGTGCTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: EPPPAATVLMSSCGA*RVTPAVLASKTCSN Trigger: GTTTGAGCACGTCTTTGAGGCTAGCACGGCAGGTGTTACCCTCCAGGCCCCACAGCTGGACATCAATACGGTGGCAGCTGGCGGGGGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS TCA 90 bp | GATCCACAGGCTGCTGTATCTCTAGCAGGTCCCCTGTACAGCCTTTaGCGGGAGAGCCGGCACCGGGTTCTCCACGATACAGCAGCACTC | + |
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Preference number: 5 (lower is better) Translates to: DPQAAVSLAGPLYSL*RESRHRVLHDTAAL Trigger: GAGTGCTGCTGTATCGTGGAGAACCCGGTGCCGGCTCTCCCGTCAAAGGCTGTACAGGGGACCTGCTAGAGATACAGCAGCCTGTGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS TCA 90 bp | GACTTAGCTGGGAAGCTGGGCAGGGTCCACTGGCCAAGAAACTGTTaGCCTCCATGGCCACAGCCTCTAGAGCCTTTCGGGAAGCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: DLAGKLGRVHWPRNC*PPWPQPLEPFGKPR Trigger: CCGAGGCTTCCCGAAAGGCTCTAGAGGCTGTGGCCATGGAGGTCAACAGTTTCTTGGCCAGTGGACCCTGCCCAGCTTCCCAGCTAAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS GCA 90 bp | AGTGCCAATATGCAGCAGGTCTCGGAAACCGCGAGTCACCAGCAGTaGCACCCGTTCTCCCTGCCGTTCCAACAGAGCATTGGTGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: SANMQQVSETASHQQ*HPFSLPFQQSIGGH Trigger: GTGGCCACCAATGCTCTGTTGGAACGGCAGGGAGAACGGGTGGCACTGCTGGTGACTCGCGGTTTCCGAGACCTGCTGCATATTGGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS GCA 90 bp | GAAGCCCTGCACATAGCGCTGGATGGTGGGAGTGAGGTAAGCATCTaGACAGGCCGTATGCCCCCGAGGAACAATCCGCACCATGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: EALHIALDGGSEVSI*TGRMPPRNNPHHGH Trigger: ATGCCCATGGTGCGGATTGTTCCTCGGGGGCATACGGCCTGTGCAGATGCTTACCTCACTCCCACCATCCAGCGCTATGTGCAGGGCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS GCA 90 bp | CTGTCCGATCAGCTCTCCCACCAGCTGGATGCCTTTCTGGTTAGCTaGCACCTGGGCACGGAGATCCGACAGGTTGTCATGCAGGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: LSDQLSHQLDAFLVS*HLGTEIRQVVMQVP Trigger: AGGAACCTGCATGACAACCTGTCGGATCTCCGTGCCCAGGTGGCAGCTAACCAGAAAGGCATCCAGCTGGTGGGAGAGCTGATCGGACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS CCA 90 bp | GCAGCACACCCCTCTCCTGCTCTAGAATTCGGCGGATGCCCTCTGTaGGTGCGTCTGCATAGTTGGCAGGATCCTCTGAGAGCAGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: AAHPSPALEFGGCPL*VRLHSWQDPLRAAS Trigger: TGAAGCTGCTCTCAGAGGATCCTGCCAACTATGCAGACGCACCCACAGAGGGCATCCGCCGAATTCTAGAGCAGGAGAGGGGTGTGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS CCA 90 bp | TTGGCAACACGCACAAACCCCATGGCCACCTCCTCCAGACTTAGCTaGGAAGCTGGGCAGGGTCCACTGGCCAAGAAACTGTTGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: LATRTNPMATSSRLS*EAGQGPLAKKLLTS Trigger: GGAGGTCAACAGTTTCTTGGCCAGTGGACCCTGCCCAGCTTCCCAGCTAAGTCTGGAGGAGGTGGCCATGGGGTTTGTGCGTGTTGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CCA 90 bp | TGTGCCTGTGAATATGCACAGTGTCCATACCCAGGGCCCGGGCAATaGCACAAGCGTGTTGCCCACCGGCTCCTCCAAAGCAAGCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: CACEYAQCPYPGPGQ*HKRVAHRLLQSKPV Trigger: TACTGGCTTGCTTTGGAGGAGCCGGTGGGCAACACGCTTGTGCCATTGCCCGGGCCCTGGGTATGGACACTGTGCATATTCACAGGCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CCA 90 bp | CGACAAACGCTGCTCCAAAGTCACCAGCACGGGGTGAGCAGGTTGTaGCCGGATGCTGATTGGCAGACACCATTAGGGCACAGTCAGTGC | + |
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Preference number: 5 (lower is better) Translates to: RQTLLQSHQHGVSRL*PDADWQTPLGHSQC Trigger: GCACTGACTGTGCCCTAATGGTGTCTGCCAATCAGCATCCGGCCACAACCTGCTCACCCCGTGCTGGTGACTTTGGAGCAGCGTTTGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CCA 90 bp | ATCAGCTCTCCCACCAGCTGGATGCCTTTCTGGTTAGCTGCCACCTaGGCACGGAGATCCGACAGGTTGTCATGCAGGTTCCTGGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: ISSPTSWMPFWLAAT*ARRSDRLSCRFLVP Trigger: TGGGACCAGGAACCTGCATGACAACCTGTCGGATCTCCGTGCCCAGGTGGCAGCTAACCAGAAAGGCATCCAGCTGGTGGGAGAGCTGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS GCA 90 bp | TGCCACCGTATTGATGTCCAGCTGTGGGGCCTGGAGGGTAACACCTaGCGTGCTAGCCTCAAAGACGTGCTCAAACTCTCCAGCATAGCG | + |
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Preference number: 5 (lower is better) Translates to: CHRIDVQLWGLEGNT*RASLKDVLKLSSIA Trigger: CGCTATGCTGGAGAGTTTGAGCACGTCTTTGAGGCTAGCACGGCAGGTGTTACCCTCCAGGCCCCACAGCTGGACATCAATACGGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CCA 90 bp | GCTCTAGAATTCGGCGGATGCCCTCTGTGGGTGCGTCTGCATAGTTaGCAGGATCCTCTGAGAGCAGCTTCAGGACACGTACATGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: ALEFGGCPLWVRLHS*QDPLRAASGHVHAL Trigger: GAGGGCATGTACGTGTCCTGAAGCTGCTCTCAGAGGATCCTGCCAACTATGCAGACGCACCCACAGAGGGCATCCGCCGAATTCTAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS CCA 90 bp | CAAAGTCACCAGCACGGGGTGAGCAGGTTGTGGCCGGATGCTGATTaGCAGACACCATTAGGGCACAGTCAGTGCCTTGGTAGCGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: QSHQHGVSRLWPDAD*QTPLGHSQCLGSEG Trigger: ACCTTCGCTACCAAGGCACTGACTGTGCCCTAATGGTGTCTGCCAATCAGCATCCGGCCACAACCTGCTCACCCCGTGCTGGTGACTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CCA 90 bp | AAGCCATACTGTCCGATCAGCTCTCCCACCAGCTGGATGCCTTTCTaGTTAGCTGCCACCTGGGCACGGAGATCCGACAGGTTGTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: KPYCPISSPTSWMPF*LAATWARRSDRLSC Trigger: GCATGACAACCTGTCGGATCTCCGTGCCCAGGTGGCAGCTAACCAGAAAGGCATCCAGCTGGTGGGAGAGCTGATCGGACAGTATGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS CCA 90 bp | TGCACCACATCTAAGCCATACTGTCCGATCAGCTCTCCCACCAGCTaGATGCCTTTCTGGTTAGCTGCCACCTGGGCACGGAGATCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: CTTSKPYCPISSPTS*MPFWLAATWARRSD Trigger: GTCGGATCTCCGTGCCCAGGTGGCAGCTAACCAGAAAGGCATCCAGCTGGTGGGAGAGCTGATCGGACAGTATGGCTTAGATGTGGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS TCA 90 bp | TTGAAGGACAGAAAAACGGCACCCTCCTGCTGCAGTGTGGTAGAGTaGGGAGGCATAGAACCCGGGGTGATACCTCCAATGTCCGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LKDRKTAPSCCSVVE*GGIEPGVIPPMSAW Trigger: CCACGCGGACATTGGAGGTATCACCCCGGGTTCTATGCCTCCTCACTCTACCACACTGCAGCAGGAGGGTGCCGTTTTTCTGTCCTTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS TCA 90 bp | TCACGGATGTCTTGCCGCCCAGATTCACTGTGCGCCCATCTTTTCTaGTCAGGAGGTTTAAGCCACGTGTACCAGGCTCTCCCCCGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SRMSCRPDSLCAHLF*SGGLSHVYQALPRG Trigger: TCCACGGGGGAGAGCCTGGTACACGTGGCTTAAACCTCCTGATCAGAAAAGATGGGCGCACAGTGAATCTGGGCGGCAAGACATCCGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS GCA 90 bp | CTGCTCCTAAGGACTAGCTTCAGCTCTTGGTTTTCCTGGATGAGCTaGACCAGGCGCCGTAGTTCCTCATTCTCTTGGGCCAGCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLRTSFSSWFSWMS*TRRRSSSFSWASLW Trigger: CCAGAGGCTGGCCCAAGAGAATGAGGAACTACGGCGCCTGGTGCAGCTCATCCAGGAAAACCAAGAGCTGAAGCTAGTCCTTAGGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210024.2 |
||
| CDS CCA 90 bp | GGTCGGCTCCTAAGTGCTGAATCTGGAACTGTACAGTCTCTTGCATaGCACCCAGGTGCACAGGAATGTGGGGAGCATTGGAGACGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRLLSAESGTVQSLA*HPGAQECGEHWRRG Trigger: GCCTCGTCTCCAATGCTCCCCACATTCCTGTGCACCTGGGTGCCATGCAAGAGACTGTACAGTTCCAGATTCAGCACTTAGGAGCCGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CCA 90 bp | GAGATCTTGCCTGGGGCCTGTAAGGCCTCTGTCACCGCCTCTTCCTaGAAGACTCCTCCCTGGACCAGTTTGAAGGACAGAAAAACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EILPGACKASVTASS*KTPPWTSLKDRKTA Trigger: TGCCGTTTTTCTGTCCTTCAAACTGGTCCAGGGAGGAGTCTTCCAGGAAGAGGCGGTGACAGAGGCCTTACAGGCCCCAGGCAAGATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS GCA 90 bp | CAAGCTTGGTGTCTATCATACTGGGAGCCTCGGCTCCCACAGAAATaGGGATGTCCCCTGTCTCAATCACCTCCGCTTGGCAACCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QAWCLSYWEPRLPQK*GCPLSQSPPLGNLV Trigger: AACCAGGTTGCCAAGCGGAGGTGATTGAGACAGGGGACATCCGCATTTCTGTGGGAGCCGAGGCTCCCAGTATGATAGACACCAAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS GCA 90 bp | GCCTCTGGGGATGGATCCAATATGGAGCCTTTGGGAATTATGACTTaGACAGGAGCCAGGCAACCCTGGTTAAGTGGGATGTCACGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASGDGSNMEPLGIMT*TGARQPWLSGMSRP Trigger: GGGCCGTGACATCCCACTTAACCAGGGTTGCCTGGCTCCTGTGCAAGTCATAATTCCCAAAGGCTCCATATTGGATCCATCCCCAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS CCA 90 bp | TCCTCTGAGAGCAGCTTCAGGACACGTACATGCCCTCCTGGGCACTaGGCAAAGACATCTGTAAAGGTGCCACCACGGTCGATGGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSESSFRTRTCPPGH*AKTSVKVPPRSMAK Trigger: TTTTGCCATCGACCGTGGTGGCACCTTTACAGATGTCTTTGCCCAGTGCCCAGGAGGGCATGTACGTGTCCTGAAGCTGCTCTCAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000165279.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
||
| CDS CCA 90 bp | GTGATGACAGTCAGGTCAGGAAGATGGCTGCCCCCTGCACTGGGATaGTTACTAAGCAACACATCACCAGGATGGAGGTCGGCTCCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VMTVRSGRWLPPALG*LLSNTSPGWRSAPK Trigger: CTTAGGAGCCGACCTCCATCCTGGTGATGTGTTGCTTAGTAACCATCCCAGTGCAGGGGGCAGCCATCTTCCTGACCTGACTGTCATCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CCA 90 bp | CTATTGCCCCTGCTCCTAAGGACTAGCTTCAGCTCTTGGTTTTCCTaGATGAGCTGCACCAGGCGCCGTAGTTCCTCATTCTCTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLPLLLRTSFSSWFS*MSCTRRRSSSFSWA Trigger: GGCCCAAGAGAATGAGGAACTACGGCGCCTGGTGCAGCTCATCCAGGAAAACCAAGAGCTGAAGCTAGTCCTTAGGAGCAGGGGCAATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210024.2 |
||
| CDS CCA 90 bp | TGTAAAGGTGCCACCACGGTCGATGGCAAAATGGAAGCGCTCTTCTaGGCTGCCCATGATGTTGAAGCTGGAGTCCAGCAGTGGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CKGATTVDGKMEALF*AAHDVEAGVQQWLF Trigger: GAAGAGCCACTGCTGGACTCCAGCTTCAACATCATGGGCAGCCCAGAAGAGCGCTTCCATTTTGCCATCGACCGTGGTGGCACCTTTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210024.2 |
||
| CDS GCA 90 bp | AAACACCGGTGTGATGACAGTCAGGTCAGGAAGATGGCTGCCCCCTaGACTGGGATGGTTACTAAGCAACACATCACCAGGATGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KHRCDDSQVRKMAAP*TGMVTKQHITRMEV Trigger: GACCTCCATCCTGGTGATGTGTTGCTTAGTAACCATCCCAGTGCAGGGGGCAGCCATCTTCCTGACCTGACTGTCATCACACCGGTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS GCA 90 bp | ATCCACGACTCGCTGAGATGTGAGCACGTTGCCTCCGACCACTGCTaGCTCTGGGGATGGATCCAATATGGAGCCTTTGGGAATTATGAC | + |
|
Preference number: 5 (lower is better) Translates to: IHDSLRCEHVASDHC*LWGWIQYGAFGNYD Trigger: GTCATAATTCCCAAAGGCTCCATATTGGATCCATCCCCAGAGGCAGCAGTGGTCGGAGGCAACGTGCTCACATCTCAGCGAGTCGTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS GCA 90 bp | GACATCCACGACTCGCTGAGATGTGAGCACGTTGCCTCCGACCACTaGTGCCTCTGGGGATGGATCCAATATGGAGCCTTTGGGAATTAT | + |
|
Preference number: 5 (lower is better) Translates to: DIHDSLRCEHVASDH*CLWGWIQYGAFGNY Trigger: ATAATTCCCAAAGGCTCCATATTGGATCCATCCCCAGAGGCAGCAGTGGTCGGAGGCAACGTGCTCACATCTCAGCGAGTCGTGGATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS CCA 90 bp | CTGAGATGTGAGCACGTTGCCTCCGACCACTGCTGCCTCTGGGGATaGATCCAATATGGAGCCTTTGGGAATTATGACTTGCACAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRCEHVASDHCCLWG*IQYGAFGNYDLHRS Trigger: GCTCCTGTGCAAGTCATAATTCCCAAAGGCTCCATATTGGATCCATCCCCAGAGGCAGCAGTGGTCGGAGGCAACGTGCTCACATCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS CCA 90 bp | GACTCGCTGAGATGTGAGCACGTTGCCTCCGACCACTGCTGCCTCTaGGGATGGATCCAATATGGAGCCTTTGGGAATTATGACTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: DSLRCEHVASDHCCL*GWIQYGAFGNYDLH Trigger: GTGCAAGTCATAATTCCCAAAGGCTCCATATTGGATCCATCCCCAGAGGCAGCAGTGGTCGGAGGCAACGTGCTCACATCTCAGCGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS CCA 90 bp | TGGGCAAAGACATCTGTAAAGGTGCCACCACGGTCGATGGCAAAATaGAAGCGCTCTTCTGGGCTGCCCATGATGTTGAAGCTGGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WAKTSVKVPPRSMAK*KRSSGLPMMLKLES Trigger: GGACTCCAGCTTCAACATCATGGGCAGCCCAGAAGAGCGCTTCCATTTTGCCATCGACCGTGGTGGCACCTTTACAGATGTCTTTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210024.2 |
||
| CDS CCA 90 bp | CTCAAAGCGGCGCAGGATAACTGGATACCGGCTCTCCAAAATCTCTaGGTCCGTAATGCGCGTGTTGGTCATGTGACTGTGTACACCACT | + |
|
Preference number: 5 (lower is better) Translates to: LKAAQDNWIPALQNL*VRNARVGHVTVYTT Trigger: AGTGGTGTACACAGTCACATGACCAACACGCGCATTACGGACCCAGAGATTTTGGAGAGCCGGTATCCAGTTATCCTGCGCCGCTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS CCA 90 bp | AAGCTTAGGCTATTGCCCCTGCTCCTAAGGACTAGCTTCAGCTCTTaGTTTTCCTGGATGAGCTGCACCAGGCGCCGTAGTTCCTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: KLRLLPLLLRTSFSS*FSWMSCTRRRSSSF Trigger: GAATGAGGAACTACGGCGCCTGGTGCAGCTCATCCAGGAAAACCAAGAGCTGAAGCTAGTCCTTAGGAGCAGGGGCAATAGCCTAAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210024.2 |
||
| CDS CCA 90 bp | AGAAATGCGGATGTCCCCTGTCTCAATCACCTCCGCTTGGCAACCTaGTTCTACAAGGATGGTGCTGTTGTTGTCAATGATCAGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RNADVPCLNHLRLAT*FYKDGAVVVNDQAG Trigger: CCCTGCCTGATCATTGACAACAACAGCACCATCCTTGTAGAACCAGGTTGCCAAGCGGAGGTGATTGAGACAGGGGACATCCGCATTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CCA 90 bp | GCTCCCACAGAAATGCGGATGTCCCCTGTCTCAATCACCTCCGCTTaGCAACCTGGTTCTACAAGGATGGTGCTGTTGTTGTCAATGATC | + |
|
Preference number: 5 (lower is better) Translates to: APTEMRMSPVSITSA*QPGSTRMVLLLSMI Trigger: GATCATTGACAACAACAGCACCATCCTTGTAGAACCAGGTTGCCAAGCGGAGGTGATTGAGACAGGGGACATCCGCATTTCTGTGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS TCA 90 bp | TTACTAAGCAACACATCACCAGGATGGAGGTCGGCTCCTAAGTGCTaGATCTGGAACTGTACAGTCTCTTGCATGGCACCCAGGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LLSNTSPGWRSAPKC*IWNCTVSCMAPRCT Trigger: TGTGCACCTGGGTGCCATGCAAGAGACTGTACAGTTCCAGATTCAGCACTTAGGAGCCGACCTCCATCCTGGTGATGTGTTGCTTAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CCA 90 bp | ATCTGCTCAGCAATGCTCATGAAACGGTGTGAGAAAATAGACAACTaGATGGGGTCAAGCTTGGTGTCTATCATACTGGGAGCCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ICSAMLMKRCEKIDN*MGSSLVSIILGASA Trigger: AGCCGAGGCTCCCAGTATGATAGACACCAAGCTTGACCCCATCCAGTTGTCTATTTTCTCACACCGTTTCATGAGCATTGCTGAGCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS TCA 72 bp | GTGGCCACGGTGGTACCCATGCGGATGCTGGCGATGTaGCTGGTGTCTAGCGGCCGGCCTCGGGGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VATVVPMRMLAM*LVSSGRPRGSS Trigger: GCTGCTGCCCCGAGGCCGGCCGCTAGACACCAGTCACATCGCCAGCATCCGCATGGGTACCACCGTGGCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS CCA 72 bp | CCACGGTGGTACCCATGCGGATGCTGGCGATGTGACTaGTGTCTAGCGGCCGGCCTCGGGGCAGCAGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: PRWYPCGCWRCD*CLAAGLGAAAH Trigger: GTGTGCTGCTGCCCCGAGGCCGGCCGCTAGACACCAGTCACATCGCCAGCATCCGCATGGGTACCACCGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS GCA 72 bp | TGCGTGAAGCCCAGCTCCCGGGCCAGTGTGCCCACCTaGTGCTCGTGCTGGGCCCACGTGTACGAATGCATG | + |
|
Preference number: 6 (lower is better) Translates to: CVKPSSRASVPT*CSCWAHVYECM Trigger: CATGCATTCGTACACGTGGGCCCAGCACGAGCAGCAGGTGGGCACACTGGCCCGGGAGCTGGGCTTCACGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS GCA 72 bp | CGCACCATGGGCATGACTTCCGAGGACAAGGAGACGTaGGTGAAGCCCAGCTCCCGGGCCAGTGTGCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: RTMGMTSEDKET*VKPSSRASVPT Trigger: GGTGGGCACACTGGCCCGGGAGCTGGGCTTCACGCACGTCTCCTTGTCCTCGGAAGTCATGCCCATGGTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CCA 72 bp | GAGCATTGGTGGCCACGGTGGTACCCATGCGGATGCTaGCGATGTGACTGGTGTCTAGCGGCCGGCCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: EHWWPRWYPCGC*RCDWCLAAGLG Trigger: CCCGAGGCCGGCCGCTAGACACCAGTCACATCGCCAGCATCCGCATGGGTACCACCGTGGCCACCAATGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS CCA 72 bp | GCAGGCAGATGGGAGAGCCATCGTCCATGTGATCCTTaGCAGACACCTCCAGGGGCAGGCCCCTGGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGRWESHRPCDP*QTPPGAGPWPG Trigger: GCCAGGCCAGGGGCCTGCCCCTGGAGGTGTCTGCCAAGGATCACATGGACGATGGCTCTCCCATCTGCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS GCA 72 bp | CCCAGCTCCCGGGCCAGTGTGCCCACCTGCTGCTCGTaGTGGGCCCACGTGTACGAATGCATGAGTACCACT | + |
|
Preference number: 6 (lower is better) Translates to: PSSRASVPTCCS*WAHVYECMSTT Trigger: AGTGGTACTCATGCATTCGTACACGTGGGCCCAGCACGAGCAGCAGGTGGGCACACTGGCCCGGGAGCTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS GCA 72 bp | GCCAGACCTGAAGAAGAGGCGGGAACCCCCGCCAGCTaGCACCGTATTGATGTCCAGCTGTGGGGCCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ARPEEEAGTPAS*HRIDVQLWGLE Trigger: CTCCAGGCCCCACAGCTGGACATCAATACGGTGGCAGCTGGCGGGGGTTCCCGCCTCTTCTTCAGGTCTGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CCA 72 bp | ACCCCCGCCAGCTGCCACCGTATTGATGTCCAGCTGTaGGGCCTGGAGGGTAACACCTGCCGTGCTAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TPASCHRIDVQL*GLEGNTCRASL Trigger: GAGGCTAGCACGGCAGGTGTTACCCTCCAGGCCCCACAGCTGGACATCAATACGGTGGCAGCTGGCGGGGGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS TCA 72 bp | GGCGGAAGCCCTGCACATAGCGCTGGATGGTGGGAGTaGGGTAAGCATCTGCACAGGCCGTATGCCCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGSPAHSAGWWE*GKHLHRPYAPE Trigger: CTCGGGGGCATACGGCCTGTGCAGATGCTTACCTCACTCCCACCATCCAGCGCTATGTGCAGGGCTTCCGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS TCA 72 bp | CGTGGAGGCCATAAGGCTGGAAGGCGCGGCGCTCCGTaGGGACAGACAGTAGCGCCTCTTCCCGAAAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: RGGHKAGRRGAP*GQTVAPLPERP Trigger: TGGTCTTTCGGGAAGAGGCGCTACTGTCTGTCCTCACGGAGCGCCGCGCCTTCCAGCCTTATGGCCTCCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS GCA 72 bp | ACAGAGCATTGGTGGCCACGGTGGTACCCATGCGGATaGTGGCGATGTGACTGGTGTCTAGCGGCCGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TEHWWPRWYPCG*WRCDWCLAAGL Trigger: GAGGCCGGCCGCTAGACACCAGTCACATCGCCAGCATCCGCATGGGTACCACCGTGGCCACCAATGCTCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
||
| CDS CCA 72 bp | GTGCCACCCGTTCTCCCTGCCGTTCCAACAGAGCATTaGTGGCCACGGTGGTACCCATGCGGATGCTGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: VPPVLPAVPTEH*WPRWYPCGCWR Trigger: TCGCCAGCATCCGCATGGGTACCACCGTGGCCACCAATGCTCTGTTGGAACGGCAGGGAGAACGGGTGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
||
| CDS CCA 72 bp | TGTTGCCCACCGGCTCCTCCAAAGCAAGCCAGTACATaGGCTGAGGGGTCGTGGCCTCGTGCCTGTGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CCPPAPPKQAST*AEGSWPRACVR Trigger: CCTCACACAGGCACGAGGCCACGACCCCTCAGCCCATGTACTGGCTTGCTTTGGAGGAGCCGGTGGGCAACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CAA 72 bp | AGTGCCACCCGTTCTCCCTGCCGTTCCAACAGAGCATaGGTGGCCACGGTGGTACCCATGCGGATGCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SATRSPCRSNRA*VATVVPMRMLA Trigger: CGCCAGCATCCGCATGGGTACCACCGTGGCCACCAATGCTCTGTTGGAACGGCAGGGAGAACGGGTGGCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS CAA 90 bp | CCAGACCTGAAGAAGAGGCGGGAACCCCCGCCAGCTGCCACCGTATaGATGTCCAGCTGTGGGGCCTGGAGGGTAACACCTGCCGTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PDLKKRREPPPAATV*MSSCGAWRVTPAVL Trigger: TAGCACGGCAGGTGTTACCCTCCAGGCCCCACAGCTGGACATCAATACGGTGGCAGCTGGCGGGGGTTCCCGCCTCTTCTTCAGGTCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS GCA 72 bp | GGTGCCAGGCCACCATCGGAGCGCATGAAGAGGACTTaGACATTCTTTAGCTGGCCCTGGAAGCCTCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GARPPSERMKRT*TFFSWPWKPRR Trigger: CCGCCGAGGCTTCCAGGGCCAGCTAAAGAATGTGCAAGTCCTCTTCATGCGCTCCGATGGTGGCCTGGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS GCA 72 bp | TCCATACCCAGGGCCCGGGCAATGGCACAAGCGTGTTaGCCACCGGCTCCTCCAAAGCAAGCCAGTACATGG | + |
|
Preference number: 6 (lower is better) Translates to: SIPRARAMAQAC*PPAPPKQASTW Trigger: CCATGTACTGGCTTGCTTTGGAGGAGCCGGTGGGCAACACGCTTGTGCCATTGCCCGGGCCCTGGGTATGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CCA 72 bp | CCACCCGTTCTCCCTGCCGTTCCAACAGAGCATTGGTaGCCACGGTGGTACCCATGCGGATGCTGGCGATGT | + |
|
Preference number: 6 (lower is better) Translates to: PPVLPAVPTEHW*PRWYPCGCWRC Trigger: ACATCGCCAGCATCCGCATGGGTACCACCGTGGCCACCAATGCTCTGTTGGAACGGCAGGGAGAACGGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
||
| CDS CCA 72 bp | CCACCTCCACGACCTCCTCATACAGTACCTCTGGCATaGGCACAGCCAGGTCAAAGAGGTCTGGGCGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PPPRPPHTVPLA*AQPGQRGLGGP Trigger: AGGCCCGCCCAGACCTCTTTGACCTGGCTGTGCCCATGCCAGAGGTACTGTATGAGGAGGTCGTGGAGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
||
| CDS CCA 72 bp | GGGCACGGAGATCCGACAGGTTGTCATGCAGGTTCCTaGTCCCACTGCAGCCAGAGATCTTGCCTGGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GHGDPTGCHAGS*SHCSQRSCLGP Trigger: AGGCCCCAGGCAAGATCTCTGGCTGCAGTGGGACCAGGAACCTGCATGACAACCTGTCGGATCTCCGTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS CAA 72 bp | AAGAAGAGGCGGGAACCCCCGCCAGCTGCCACCGTATaGATGTCCAGCTGTGGGGCCTGGAGGGTAACACCT | + |
|
Preference number: 6 (lower is better) Translates to: KKRREPPPAATV*MSSCGAWRVTP Trigger: AGGTGTTACCCTCCAGGCCCCACAGCTGGACATCAATACGGTGGCAGCTGGCGGGGGTTCCCGCCTCTTCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CAA 72 bp | TGTGTGAGGGCACGGATAGGCCGGCACATGGCTTCGTaGGCAACACGCACAAACCCCATGGCCACCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CVRARIGRHMAS*ATRTNPMATSS Trigger: GGAGGAGGTGGCCATGGGGTTTGTGCGTGTTGCCAACGAAGCCATGTGCCGGCCTATCCGTGCCCTCACACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CAA 72 bp | TGCATGGCACCCAGGTGCACAGGAATGTGGGGAGCATaGGAGACGAGGCCCCCATCTGGCCCAAAGAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CMAPRCTGMWGA*ETRPPSGPKRA Trigger: TGCCCTCTTTGGGCCAGATGGGGGCCTCGTCTCCAATGCTCCCCACATTCCTGTGCACCTGGGTGCCATGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS TCA 72 bp | ATGGGCACAGCCAGGTCAAAGAGGTCTGGGCGGGCCTaGGTGCCAATATGCAGCAGGTCTCGGAAACCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: MGTARSKRSGRA*VPICSRSRKPR Trigger: TCGCGGTTTCCGAGACCTGCTGCATATTGGCACTCAGGCCCGCCCAGACCTCTTTGACCTGGCTGTGCCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
||
| CDS TCA 72 bp | CCTGCTGCTCGTGCTGGGCCCACGTGTACGAATGCATaGGTACCACTGCCAGGCTGTGAATGCCCCGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PAARAGPTCTNA*VPLPGCECPES Trigger: TGACTCGGGGCATTCACAGCCTGGCAGTGGTACTCATGCATTCGTACACGTGGGCCCAGCACGAGCAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS TCA 72 bp | GGGAAGCTGGGCAGGGTCCACTGGCCAAGAAACTGTTaGCCTCCATGGCCACAGCCTCTAGAGCCTTTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GKLGRVHWPRNC*PPWPQPLEPFG Trigger: CCCGAAAGGCTCTAGAGGCTGTGGCCATGGAGGTCAACAGTTTCTTGGCCAGTGGACCCTGCCCAGCTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS GCA 72 bp | GTTCCAACAGAGCATTGGTGGCCACGGTGGTACCCATaGGGATGCTGGCGATGTGACTGGTGTCTAGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VPTEHWWPRWYP*GCWRCDWCLAA Trigger: GGCCGCTAGACACCAGTCACATCGCCAGCATCCGCATGGGTACCACCGTGGCCACCAATGCTCTGTTGGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
||
| CDS GCA 72 bp | AAACCGCGAGTCACCAGCAGTGCCACCCGTTCTCCCTaGCGTTCCAACAGAGCATTGGTGGCCACGGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: KPRVTSSATRSP*RSNRALVATVV Trigger: TACCACCGTGGCCACCAATGCTCTGTTGGAACGGCAGGGAGAACGGGTGGCACTGCTGGTGACTCGCGGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
||
| CDS GCA 72 bp | CATGCAGGTTCCTGGTCCCACTGCAGCCAGAGATCTTaGCTGGGGCCTGTAAGGCCTCTGTCACCGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: HAGSWSHCSQRS*LGPVRPLSPPL Trigger: AAGAGGCGGTGACAGAGGCCTTACAGGCCCCAGGCAAGATCTCTGGCTGCAGTGGGACCAGGAACCTGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS CCA 72 bp | CTCCCTGCCGTTCCAACAGAGCATTGGTGGCCACGGTaGTACCCATGCGGATGCTGGCGATGTGACTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LPAVPTEHWWPR*YPCGCWRCDWC Trigger: ACACCAGTCACATCGCCAGCATCCGCATGGGTACCACCGTGGCCACCAATGCTCTGTTGGAACGGCAGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
||
| CDS CCA 72 bp | TACCTCTGGCATGGGCACAGCCAGGTCAAAGAGGTCTaGGCGGGCCTGAGTGCCAATATGCAGCAGGTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: YLWHGHSQVKEV*AGLSANMQQVS Trigger: CGAGACCTGCTGCATATTGGCACTCAGGCCCGCCCAGACCTCTTTGACCTGGCTGTGCCCATGCCAGAGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
||
| CDS CCA 72 bp | CTCGTCCACCTCCACGACCTCCTCATACAGTACCTCTaGCATGGGCACAGCCAGGTCAAAGAGGTCTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LVHLHDLLIQYL*HGHSQVKEVWA Trigger: CGCCCAGACCTCTTTGACCTGGCTGTGCCCATGCCAGAGGTACTGTATGAGGAGGTCGTGGAGGTGGACGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
||
| CDS CCA 72 bp | CCAGCTGCCACCGTATTGATGTCCAGCTGTGGGGCCTaGAGGGTAACACCTGCCGTGCTAGCCTCAAAGACG | + |
|
Preference number: 6 (lower is better) Translates to: PAATVLMSSCGA*RVTPAVLASKT Trigger: CGTCTTTGAGGCTAGCACGGCAGGTGTTACCCTCCAGGCCCCACAGCTGGACATCAATACGGTGGCAGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CCA 72 bp | GGCACATGGCTTCGTTGGCAACACGCACAAACCCCATaGCCACCTCCTCCAGACTTAGCTGGGAAGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTWLRWQHAQTP*PPPPDLAGKLG Trigger: GCCCAGCTTCCCAGCTAAGTCTGGAGGAGGTGGCCATGGGGTTTGTGCGTGTTGCCAACGAAGCCATGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CCA 72 bp | GAATATGCACAGTGTCCATACCCAGGGCCCGGGCAATaGCACAAGCGTGTTGCCCACCGGCTCCTCCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: EYAQCPYPGPGQ*HKRVAHRLLQS Trigger: GCTTTGGAGGAGCCGGTGGGCAACACGCTTGTGCCATTGCCCGGGCCCTGGGTATGGACACTGTGCATATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CCA 72 bp | AGGAATGTGGGGAGCATTGGAGACGAGGCCCCCATCTaGCCCAAAGAGGGCACAGGAGAAGTCGAGGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RNVGSIGDEAPI*PKEGTGEVEAF Trigger: GAACGCCTCGACTTCTCCTGTGCCCTCTTTGGGCCAGATGGGGGCCTCGTCTCCAATGCTCCCCACATTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CCA 72 bp | TGTCCGATCAGCTCTCCCACCAGCTGGATGCCTTTCTaGTTAGCTGCCACCTGGGCACGGAGATCCGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: CPISSPTSWMPF*LAATWARRSDR Trigger: CCTGTCGGATCTCCGTGCCCAGGTGGCAGCTAACCAGAAAGGCATCCAGCTGGTGGGAGAGCTGATCGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS CAA 72 bp | GGCTGCTGTATCTCTAGCAGGTCCCCTGTACAGCCTTaGACGGGAGAGCCGGCACCGGGTTCTCCACGATAC | + |
|
Preference number: 6 (lower is better) Translates to: GCCISSRSPVQP*TGEPAPGSPRY Trigger: GTATCGTGGAGAACCCGGTGCCGGCTCTCCCGTCAAAGGCTGTACAGGGGACCTGCTAGAGATACAGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CAA 72 bp | TGGTTAGCTGCCACCTGGGCACGGAGATCCGACAGGTaGTCATGCAGGTTCCTGGTCCCACTGCAGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WLAATWARRSDR*SCRFLVPLQPE Trigger: CTCTGGCTGCAGTGGGACCAGGAACCTGCATGACAACCTGTCGGATCTCCGTGCCCAGGTGGCAGCTAACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS CAA 90 bp | CCCCCATCTGGCCCAAAGAGGGCACAGGAGAAGTCGAGGCGTTCCTaGATGTTGGTAGAGATGGCTGTGCGCTGTAGGATGCGGCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: PPSGPKRAQEKSRRS*MLVEMAVRCRMRPI Trigger: GATGGGCCGCATCCTACAGCGCACAGCCATCTCTACCAACATCAAGGAACGCCTCGACTTCTCCTGTGCCCTCTTTGGGCCAGATGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CAA 90 bp | ACAGTCTCTTGCATGGCACCCAGGTGCACAGGAATGTGGGGAGCATaGGAGACGAGGCCCCCATCTGGCCCAAAGAGGGCACAGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TVSCMAPRCTGMWGA*ETRPPSGPKRAQEK Trigger: CTTCTCCTGTGCCCTCTTTGGGCCAGATGGGGGCCTCGTCTCCAATGCTCCCCACATTCCTGTGCACCTGGGTGCCATGCAAGAGACTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS TCA 72 bp | TTTGCGGTAGCAGGCAGGACCTGGGTGGGCACCTGCTaGCTCTGGACCAACCACAAAGAGGCCAGACCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: FAVAGRTWVGTC*LWTNHKEARPE Trigger: TTCAGGTCTGGCCTCTTTGTGGTTGGTCCAGAGTCAGCAGGTGCCCACCCAGGTCCTGCCTGCTACCGCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS TCA 72 bp | TCACCAGCACGGGGTGAGCAGGTTGTGGCCGGATGCTaGTTGGCAGACACCATTAGGGCACAGTCAGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPARGEQVVAGC*LADTIRAQSVP Trigger: AGGCACTGACTGTGCCCTAATGGTGTCTGCCAATCAGCATCCGGCCACAACCTGCTCACCCCGTGCTGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS TCA 72 bp | CTCGACAAACGCTGCTCCAAAGTCACCAGCACGGGGTaGGCAGGTTGTGGCCGGATGCTGATTGGCAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: LDKRCSKVTSTG*AGCGRMLIGRH Trigger: GTGTCTGCCAATCAGCATCCGGCCACAACCTGCTCACCCCGTGCTGGTGACTTTGGAGCAGCGTTTGTCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS GCA 72 bp | ATGCAGCAGGTCTCGGAAACCGCGAGTCACCAGCAGTaGCACCCGTTCTCCCTGCCGTTCCAACAGAGCATT | + |
|
Preference number: 6 (lower is better) Translates to: MQQVSETASHQQ*HPFSLPFQQSI Trigger: AATGCTCTGTTGGAACGGCAGGGAGAACGGGTGGCACTGCTGGTGACTCGCGGTTTCCGAGACCTGCTGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS GCA 72 bp | GATCCGACAGGTTGTCATGCAGGTTCCTGGTCCCACTaGAGCCAGAGATCTTGCCTGGGGCCTGTAAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: DPTGCHAGSWSH*SQRSCLGPVRP Trigger: AGGCCTTACAGGCCCCAGGCAAGATCTCTGGCTGCAGTGGGACCAGGAACCTGCATGACAACCTGTCGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS CCA 72 bp | CAGCACGGGGTGAGCAGGTTGTGGCCGGATGCTGATTaGCAGACACCATTAGGGCACAGTCAGTGCCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QHGVSRLWPDAD*QTPLGHSQCLG Trigger: ACCAAGGCACTGACTGTGCCCTAATGGTGTCTGCCAATCAGCATCCGGCCACAACCTGCTCACCCCGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CCA 72 bp | CTGCTCCAAAGTCACCAGCACGGGGTGAGCAGGTTGTaGCCGGATGCTGATTGGCAGACACCATTAGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLQSHQHGVSRL*PDADWQTPLGH Trigger: GTGCCCTAATGGTGTCTGCCAATCAGCATCCGGCCACAACCTGCTCACCCCGTGCTGGTGACTTTGGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CCA 72 bp | CCCACCAGCTGGATGCCTTTCTGGTTAGCTGCCACCTaGGCACGGAGATCCGACAGGTTGTCATGCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PTSWMPFWLAAT*ARRSDRLSCRF Trigger: GAACCTGCATGACAACCTGTCGGATCTCCGTGCCCAGGTGGCAGCTAACCAGAAAGGCATCCAGCTGGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS CAA 72 bp | TGGGAAGCTGGGCAGGGTCCACTGGCCAAGAAACTGTaGACCTCCATGGCCACAGCCTCTAGAGCCTTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: WEAGQGPLAKKL*TSMATASRAFR Trigger: CCGAAAGGCTCTAGAGGCTGTGGCCATGGAGGTCAACAGTTTCTTGGCCAGTGGACCCTGCCCAGCTTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CAA 72 bp | ACGCTGCTCCAAAGTCACCAGCACGGGGTGAGCAGGTaGTGGCCGGATGCTGATTGGCAGACACCATTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TLLQSHQHGVSR*WPDADWQTPLG Trigger: CCCTAATGGTGTCTGCCAATCAGCATCCGGCCACAACCTGCTCACCCCGTGCTGGTGACTTTGGAGCAGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CAA 90 bp | AGATCCACAGGCTGCTGTATCTCTAGCAGGTCCCCTGTACAGCCTTaGACGGGAGAGCCGGCACCGGGTTCTCCACGATACAGCAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: RSTGCCISSRSPVQP*TGEPAPGSPRYSST Trigger: AGTGCTGCTGTATCGTGGAGAACCCGGTGCCGGCTCTCCCGTCAAAGGCTGTACAGGGGACCTGCTAGAGATACAGCAGCCTGTGGATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CAA 90 bp | AGACTTAGCTGGGAAGCTGGGCAGGGTCCACTGGCCAAGAAACTGTaGACCTCCATGGCCACAGCCTCTAGAGCCTTTCGGGAAGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RLSWEAGQGPLAKKL*TSMATASRAFREAS Trigger: CGAGGCTTCCCGAAAGGCTCTAGAGGCTGTGGCCATGGAGGTCAACAGTTTCTTGGCCAGTGGACCCTGCCCAGCTTCCCAGCTAAGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CAA 90 bp | GTGTGGAGGCAGAACGCGTCCCCGGGATACACAGTCACGGATGTCTaGCCGCCCAGATTCACTGTGCGCCCATCTTTTCTGATCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VWRQNASPGYTVTDV*PPRFTVRPSFLIRR Trigger: CCTCCTGATCAGAAAAGATGGGCGCACAGTGAATCTGGGCGGCAAGACATCCGTGACTGTGTATCCCGGGGACGCGTTCTGCCTCCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS CAA 90 bp | GGCATCCACACACTGCTCCTCCAGGCGGCTCAGTCTCTGGTCCAGTaGTGCAAAGGTTTCAGGTGTGTAAGACAGGGAACAGGGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GIHTLLLQAAQSLVQ*CKGFRCVRQGTGLL Trigger: CAGGAGCCCTGTTCCCTGTCTTACACACCTGAAACCTTTGCACAACTGGACCAGAGACTGAGCCGCCTGGAGGAGCAGTGTGTGGATGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CAA 90 bp | TCTCGACAAACGCTGCTCCAAAGTCACCAGCACGGGGTGAGCAGGTaGTGGCCGGATGCTGATTGGCAGACACCATTAGGGCACAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRQTLLQSHQHGVSR*WPDADWQTPLGHSQ Trigger: CTGACTGTGCCCTAATGGTGTCTGCCAATCAGCATCCGGCCACAACCTGCTCACCCCGTGCTGGTGACTTTGGAGCAGCGTTTGTCGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CAA 90 bp | TCTGGCCCAAAGAGGGCACAGGAGAAGTCGAGGCGTTCCTTGATGTaGGTAGAGATGGCTGTGCGCTGTAGGATGCGGCCCATCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGPKRAQEKSRRSLM*VEMAVRCRMRPICS Trigger: TGAGCAGATGGGCCGCATCCTACAGCGCACAGCCATCTCTACCAACATCAAGGAACGCCTCGACTTCTCCTGTGCCCTCTTTGGGCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS CAA 90 bp | ATGCCTTTCTGGTTAGCTGCCACCTGGGCACGGAGATCCGACAGGTaGTCATGCAGGTTCCTGGTCCCACTGCAGCCAGAGATCTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: MPFWLAATWARRSDR*SCRFLVPLQPEILP Trigger: AGGCAAGATCTCTGGCTGCAGTGGGACCAGGAACCTGCATGACAACCTGTCGGATCTCCGTGCCCAGGTGGCAGCTAACCAGAAAGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS TCA 72 bp | CTCTGTGGGTGCGTCTGCATAGTTGGCAGGATCCTCTaGGAGCAGCTTCAGGACACGTACATGCCCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LCGCVCIVGRIL*EQLQDTYMPSW Trigger: CCAGGAGGGCATGTACGTGTCCTGAAGCTGCTCTCAGAGGATCCTGCCAACTATGCAGACGCACCCACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000165279.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
||
| CDS TCA 72 bp | CACGTGTACGAATGCATGAGTACCACTGCCAGGCTGTaGATGCCCCGAGTCAAGAGCCCCTCCAGCTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HVYECMSTTARL*MPRVKSPSSFP Trigger: TGGGAAGCTGGAGGGGCTCTTGACTCGGGGCATTCACAGCCTGGCAGTGGTACTCATGCATTCGTACACGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS TCA 72 bp | AGGCATCCATGGGTGCCAGGCCACCATCGGAGCGCATaGAGAGGACTTGCACATTCTTTAGCTGGCCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RHPWVPGHHRSA*RGLAHSLAGPG Trigger: TCCAGGGCCAGCTAAAGAATGTGCAAGTCCTCTTCATGCGCTCCGATGGTGGCCTGGCACCCATGGATGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS GCA 72 bp | GGTTTCAGGTGTGTAAGACAGGGAACAGGGCTCCTGTaGTTCGTGAACCACATCGGCCAAGGCCAGTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GFRCVRQGTGLL*FVNHIGQGQSQ Trigger: CTGGGACTGGCCTTGGCCGATGTGGTTCACGAAGCACAGGAGCCCTGTTCCCTGTCTTACACACCTGAAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
||
| CDS GCA 72 bp | TCGCTGAGATGTGAGCACGTTGCCTCCGACCACTGCTaGCTCTGGGGATGGATCCAATATGGAGCCTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLRCEHVASDHC*LWGWIQYGAFG Trigger: CCCAAAGGCTCCATATTGGATCCATCCCCAGAGGCAGCAGTGGTCGGAGGCAACGTGCTCACATCTCAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
||
| CDS CCA 72 bp | AGCAGCTTCAGGACACGTACATGCCCTCCTGGGCACTaGGCAAAGACATCTGTAAAGGTGCCACCACGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SSFRTRTCPPGH*AKTSVKVPPRS Trigger: CGACCGTGGTGGCACCTTTACAGATGTCTTTGCCCAGTGCCCAGGAGGGCATGTACGTGTCCTGAAGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000165279.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
||
| CDS CCA 72 bp | CCCTCTCCTGCTCTAGAATTCGGCGGATGCCCTCTGTaGGTGCGTCTGCATAGTTGGCAGGATCCTCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PSPALEFGGCPL*VRLHSWQDPLR Trigger: TCTCAGAGGATCCTGCCAACTATGCAGACGCACCCACAGAGGGCATCCGCCGAATTCTAGAGCAGGAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 ENSMUST00000210024.2 |
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| CDS CCA 72 bp | TCTAAGCCATACTGTCCGATCAGCTCTCCCACCAGCTaGATGCCTTTCTGGTTAGCTGCCACCTGGGCACGG | + |
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Preference number: 6 (lower is better) Translates to: SKPYCPISSPTS*MPFWLAATWAR Trigger: CCGTGCCCAGGTGGCAGCTAACCAGAAAGGCATCCAGCTGGTGGGAGAGCTGATCGGACAGTATGGCTTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS CAA 72 bp | AAGAGGGCACAGGAGAAGTCGAGGCGTTCCTTGATGTaGGTAGAGATGGCTGTGCGCTGTAGGATGCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: KRAQEKSRRSLM*VEMAVRCRMRP Trigger: GGGCCGCATCCTACAGCGCACAGCCATCTCTACCAACATCAAGGAACGCCTCGACTTCTCCTGTGCCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CAA 72 bp | CAGAACGCGTCCCCGGGATACACAGTCACGGATGTCTaGCCGCCCAGATTCACTGTGCGCCCATCTTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: QNASPGYTVTDV*PPRFTVRPSFL Trigger: CAGAAAAGATGGGCGCACAGTGAATCTGGGCGGCAAGACATCCGTGACTGTGTATCCCGGGGACGCGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS TCA 72 bp | AAAATCTCTGGGTCCGTAATGCGCGTGTTGGTCATGTaGCTGTGTACACCACTGCGCCCATGCCAGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: KISGSVMRVLVM*LCTPLRPCQPG Trigger: CCCTGGCTGGCATGGGCGCAGTGGTGTACACAGTCACATGACCAACACGCGCATTACGGACCCAGAGATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS GCA 72 bp | ATTGATGTCCAGCTGTGGGGCCTGGAGGGTAACACCTaGCGTGCTAGCCTCAAAGACGTGCTCAAACTCTCC | + |
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Preference number: 6 (lower is better) Translates to: IDVQLWGLEGNT*RASLKDVLKLS Trigger: GGAGAGTTTGAGCACGTCTTTGAGGCTAGCACGGCAGGTGTTACCCTCCAGGCCCCACAGCTGGACATCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS GCA 72 bp | GATGCTGATTGGCAGACACCATTAGGGCACAGTCAGTaGCTTGGTAGCGAAGGTGCAGGAAGCTCTCGGTGC | + |
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Preference number: 6 (lower is better) Translates to: DADWQTPLGHSQ*LGSEGAGSSRC Trigger: GCACCGAGAGCTTCCTGCACCTTCGCTACCAAGGCACTGACTGTGCCCTAATGGTGTCTGCCAATCAGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS GCA 72 bp | TGTCTATCATACTGGGAGCCTCGGCTCCCACAGAAATaGGGATGTCCCCTGTCTCAATCACCTCCGCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: CLSYWEPRLPQK*GCPLSQSPPLG Trigger: GCCAAGCGGAGGTGATTGAGACAGGGGACATCCGCATTTCTGTGGGAGCCGAGGCTCCCAGTATGATAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS GCA 72 bp | ATCTGGAACTGTACAGTCTCTTGCATGGCACCCAGGTaGACAGGAATGTGGGGAGCATTGGAGACGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: IWNCTVSCMAPR*TGMWGALETRP Trigger: GGGCCTCGTCTCCAATGCTCCCCACATTCCTGTGCACCTGGGTGCCATGCAAGAGACTGTACAGTTCCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS GCA 72 bp | GACTCGCTGAGATGTGAGCACGTTGCCTCCGACCACTaGTGCCTCTGGGGATGGATCCAATATGGAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: DSLRCEHVASDH*CLWGWIQYGAF Trigger: AAAGGCTCCATATTGGATCCATCCCCAGAGGCAGCAGTGGTCGGAGGCAACGTGCTCACATCTCAGCGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS GCA 72 bp | CACCAGCTACTGTCTCATAGTAGCCCATACGGGCATTaGCCAGGGTCACATTGTTCATGCAGCCCTGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: HQLLSHSSPYGH*PGSHCSCSPGR Trigger: CCTCCCAGGGCTGCATGAACAATGTGACCCTGGGCAATGCCCGTATGGGCTACTATGAGACAGTAGCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS CCA 72 bp | GTCAGGTCAGGAAGATGGCTGCCCCCTGCACTGGGATaGTTACTAAGCAACACATCACCAGGATGGAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: VRSGRWLPPALG*LLSNTSPGWRS Trigger: CGACCTCCATCCTGGTGATGTGTTGCTTAGTAACCATCCCAGTGCAGGGGGCAGCCATCTTCCTGACCTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CAA 72 bp | GGCCCAAAGAGGGCACAGGAGAAGTCGAGGCGTTCCTaGATGTTGGTAGAGATGGCTGTGCGCTGTAGGATG | + |
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Preference number: 6 (lower is better) Translates to: GPKRAQEKSRRS*MLVEMAVRCRM Trigger: CATCCTACAGCGCACAGCCATCTCTACCAACATCAAGGAACGCCTCGACTTCTCCTGTGCCCTCTTTGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CAA 90 bp | AGTGGCTCTTCGGCTGGTAGCCCTGGGAGAACTCTCTCGACATCCTaGAATCTGATCGTTTTCCGCTTTGGCAGCCTGGGAGTGGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SGSSAGSPGRTLSTS*NLIVFRFGSLGVAV Trigger: AACTGCCACTCCCAGGCTGCCAAAGCGGAAAACGATCAGATTCAAGGATGTCGAGAGAGTTCTCCCAGGGCTACCAGCCGAAGAGCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210024.2 |
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| CDS TCA 72 bp | AGAAAAACGGCACCCTCCTGCTGCAGTGTGGTAGAGTaGGGAGGCATAGAACCCGGGGTGATACCTCCAATG | + |
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Preference number: 6 (lower is better) Translates to: RKTAPSCCSVVE*GGIEPGVIPPM Trigger: CATTGGAGGTATCACCCCGGGTTCTATGCCTCCTCACTCTACCACACTGCAGCAGGAGGGTGCCGTTTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS GCA 72 bp | AGGACTAGCTTCAGCTCTTGGTTTTCCTGGATGAGCTaGACCAGGCGCCGTAGTTCCTCATTCTCTTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RTSFSSWFSWMS*TRRRSSSFSWA Trigger: GGCCCAAGAGAATGAGGAACTACGGCGCCTGGTGCAGCTCATCCAGGAAAACCAAGAGCTGAAGCTAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210024.2 |
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| CDS CCA 72 bp | TTGGGAATTATGACTTGCACAGGAGCCAGGCAACCCTaGTTAAGTGGGATGTCACGGCCCACTAGACAGCGC | + |
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Preference number: 6 (lower is better) Translates to: LGIMTCTGARQP*LSGMSRPTRQR Trigger: GCGCTGTCTAGTGGGCCGTGACATCCCACTTAACCAGGGTTGCCTGGCTCCTGTGCAAGTCATAATTCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS CCA 72 bp | AGAGCCTGGCCTCAGCTCAAAGCGGCGCAGGATAACTaGATACCGGCTCTCCAAAATCTCTGGGTCCGTAAT | + |
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Preference number: 6 (lower is better) Translates to: RAWPQLKAAQDN*IPALQNLWVRN Trigger: ATTACGGACCCAGAGATTTTGGAGAGCCGGTATCCAGTTATCCTGCGCCGCTTTGAGCTGAGGCCAGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS CCA 72 bp | CTATTGCCCCTGCTCCTAAGGACTAGCTTCAGCTCTTaGTTTTCCTGGATGAGCTGCACCAGGCGCCGTAGT | + |
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Preference number: 6 (lower is better) Translates to: LLPLLLRTSFSS*FSWMSCTRRRS Trigger: ACTACGGCGCCTGGTGCAGCTCATCCAGGAAAACCAAGAGCTGAAGCTAGTCCTTAGGAGCAGGGGCAATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210024.2 |
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| CDS CAA 72 bp | TCGGCTGGTAGCCCTGGGAGAACTCTCTCGACATCCTaGAATCTGATCGTTTTCCGCTTTGGCAGCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SAGSPGRTLSTS*NLIVFRFGSLG Trigger: TCCCAGGCTGCCAAAGCGGAAAACGATCAGATTCAAGGATGTCGAGAGAGTTCTCCCAGGGCTACCAGCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210024.2 |
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| CDS TCA 72 bp | TCTTGCCGCCCAGATTCACTGTGCGCCCATCTTTTCTaGTCAGGAGGTTTAAGCCACGTGTACCAGGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SCRPDSLCAHLF*SGGLSHVYQAL Trigger: GAGAGCCTGGTACACGTGGCTTAAACCTCCTGATCAGAAAAGATGGGCGCACAGTGAATCTGGGCGGCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS GCA 72 bp | TGTGATGACAGTCAGGTCAGGAAGATGGCTGCCCCCTaGACTGGGATGGTTACTAAGCAACACATCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: CDDSQVRKMAAP*TGMVTKQHITR Trigger: CCTGGTGATGTGTTGCTTAGTAACCATCCCAGTGCAGGGGGCAGCCATCTTCCTGACCTGACTGTCATCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CCA 72 bp | GAGCACGTTGCCTCCGACCACTGCTGCCTCTGGGGATaGATCCAATATGGAGCCTTTGGGAATTATGACTTG | + |
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Preference number: 6 (lower is better) Translates to: EHVASDHCCLWG*IQYGAFGNYDL Trigger: CAAGTCATAATTCCCAAAGGCTCCATATTGGATCCATCCCCAGAGGCAGCAGTGGTCGGAGGCAACGTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS CCA 72 bp | GCGCAGGATAACTGGATACCGGCTCTCCAAAATCTCTaGGTCCGTAATGCGCGTGTTGGTCATGTGACTGTG | + |
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Preference number: 6 (lower is better) Translates to: AQDNWIPALQNL*VRNARVGHVTV Trigger: CACAGTCACATGACCAACACGCGCATTACGGACCCAGAGATTTTGGAGAGCCGGTATCCAGTTATCCTGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS TCA 72 bp | AACACATCACCAGGATGGAGGTCGGCTCCTAAGTGCTaGATCTGGAACTGTACAGTCTCTTGCATGGCACCC | + |
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Preference number: 6 (lower is better) Translates to: NTSPGWRSAPKC*IWNCTVSCMAP Trigger: GGGTGCCATGCAAGAGACTGTACAGTTCCAGATTCAGCACTTAGGAGCCGACCTCCATCCTGGTGATGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CCA 72 bp | GAAATGCGGATGTCCCCTGTCTCAATCACCTCCGCTTaGCAACCTGGTTCTACAAGGATGGTGCTGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: EMRMSPVSITSA*QPGSTRMVLLL Trigger: CAACAACAGCACCATCCTTGTAGAACCAGGTTGCCAAGCGGAGGTGATTGAGACAGGGGACATCCGCATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CCA 72 bp | CTAAGTGCTGAATCTGGAACTGTACAGTCTCTTGCATaGCACCCAGGTGCACAGGAATGTGGGGAGCATTGG | + |
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Preference number: 6 (lower is better) Translates to: LSAESGTVQSLA*HPGAQECGEHW Trigger: CCAATGCTCCCCACATTCCTGTGCACCTGGGTGCCATGCAAGAGACTGTACAGTTCCAGATTCAGCACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CCA 72 bp | AGATGTGAGCACGTTGCCTCCGACCACTGCTGCCTCTaGGGATGGATCCAATATGGAGCCTTTGGGAATTAT | + |
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Preference number: 6 (lower is better) Translates to: RCEHVASDHCCL*GWIQYGAFGNY Trigger: ATAATTCCCAAAGGCTCCATATTGGATCCATCCCCAGAGGCAGCAGTGGTCGGAGGCAACGTGCTCACATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS CCA 72 bp | ACATCTGTAAAGGTGCCACCACGGTCGATGGCAAAATaGAAGCGCTCTTCTGGGCTGCCCATGATGTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TSVKVPPRSMAK*KRSSGLPMMLK Trigger: CTTCAACATCATGGGCAGCCCAGAAGAGCGCTTCCATTTTGCCATCGACCGTGGTGGCACCTTTACAGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210024.2 |
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| CDS CAA 72 bp | CGGTGTGAGAAAATAGACAACTGGATGGGGTCAAGCTaGGTGTCTATCATACTGGGAGCCTCGGCTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RCEKIDNWMGSS*VSIILGASAPT Trigger: TGTGGGAGCCGAGGCTCCCAGTATGATAGACACCAAGCTTGACCCCATCCAGTTGTCTATTTTCTCACACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CAA 72 bp | TCTGACAGGATGTTGGCGCTACAGAAGCTTAGGCTATaGCCCCTGCTCCTAAGGACTAGCTTCAGCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SDRMLALQKLRL*PLLLRTSFSSW Trigger: CCAAGAGCTGAAGCTAGTCCTTAGGAGCAGGGGCAATAGCCTAAGCTTCTGTAGCGCCAACATCCTGTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210024.2 |
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| CDS CAA 90 bp | GGCTCCCACAGAAATGCGGATGTCCCCTGTCTCAATCACCTCCGCTaGGCAACCTGGTTCTACAAGGATGGTGCTGTTGTTGTCAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: GSHRNADVPCLNHLR*ATWFYKDGAVVVND Trigger: ATCATTGACAACAACAGCACCATCCTTGTAGAACCAGGTTGCCAAGCGGAGGTGATTGAGACAGGGGACATCCGCATTTCTGTGGGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CAA 90 bp | CTCATGAAACGGTGTGAGAAAATAGACAACTGGATGGGGTCAAGCTaGGTGTCTATCATACTGGGAGCCTCGGCTCCCACAGAAATGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LMKRCEKIDNWMGSS*VSIILGASAPTEMR Trigger: CCGCATTTCTGTGGGAGCCGAGGCTCCCAGTATGATAGACACCAAGCTTGACCCCATCCAGTTGTCTATTTTCTCACACCGTTTCATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CAA 90 bp | GCAGTTGTTTCTGACAGGATGTTGGCGCTACAGAAGCTTAGGCTATaGCCCCTGCTCCTAAGGACTAGCTTCAGCTCTTGGTTTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AVVSDRMLALQKLRL*PLLLRTSFSSWFSW Trigger: CCAGGAAAACCAAGAGCTGAAGCTAGTCCTTAGGAGCAGGGGCAATAGCCTAAGCTTCTGTAGCGCCAACATCCTGTCAGAAACAACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210024.2 |
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| CDS TCA 72 bp | GCGGCCCATCTGCTCAGCAATGCTCATGAAACGGTGTaGGAAAATAGACAACTGGATGGGGTCAAGCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: AAHLLSNAHETV*ENRQLDGVKLG Trigger: ACCAAGCTTGACCCCATCCAGTTGTCTATTTTCTCACACCGTTTCATGAGCATTGCTGAGCAGATGGGCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CAA 72 bp | AGAAATGCGGATGTCCCCTGTCTCAATCACCTCCGCTaGGCAACCTGGTTCTACAAGGATGGTGCTGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RNADVPCLNHLR*ATWFYKDGAVV Trigger: AACAACAGCACCATCCTTGTAGAACCAGGTTGCCAAGCGGAGGTGATTGAGACAGGGGACATCCGCATTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CAA 72 bp | AGAGCAGACAGTGTTATGGCTCGAGGGGCATTGAGATaGCCAAACACCTCAGACCCAGAACCACTGAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RADSVMARGALR*PNTSDPEPLKS Trigger: TGACTTCAGTGGTTCTGGGTCTGAGGTGTTTGGCAATCTCAATGCCCCTCGAGCCATAACACTGTCTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS GCA 72 bp | GATGGATCCAATATGGAGCCTTTGGGAATTATGACTTaGACAGGAGCCAGGCAACCCTGGTTAAGTGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: DGSNMEPLGIMT*TGARQPWLSGM Trigger: CATCCCACTTAACCAGGGTTGCCTGGCTCCTGTGCAAGTCATAATTCCCAAAGGCTCCATATTGGATCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS CCA 72 bp | GATGTCCCCTGTCTCAATCACCTCCGCTTGGCAACCTaGTTCTACAAGGATGGTGCTGTTGTTGTCAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: DVPCLNHLRLAT*FYKDGAVVVND Trigger: ATCATTGACAACAACAGCACCATCCTTGTAGAACCAGGTTGCCAAGCGGAGGTGATTGAGACAGGGGACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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| CDS CAA 72 bp | GGATGGATCCAATATGGAGCCTTTGGGAATTATGACTaGCACAGGAGCCAGGCAACCCTGGTTAAGTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GWIQYGAFGNYD*HRSQATLVKWD Trigger: ATCCCACTTAACCAGGGTTGCCTGGCTCCTGTGCAAGTCATAATTCCCAAAGGCTCCATATTGGATCCATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023222.13 ENSMUST00000171340.9 |
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| CDS CCA 72 bp | GCAATGCTCATGAAACGGTGTGAGAAAATAGACAACTaGATGGGGTCAAGCTTGGTGTCTATCATACTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AMLMKRCEKIDN*MGSSLVSIILG Trigger: TCCCAGTATGATAGACACCAAGCTTGACCCCATCCAGTTGTCTATTTTCTCACACCGTTTCATGAGCATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023222.13 ENSMUST00000164189.2 ENSMUST00000171340.9 |
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