Pregenerated sensors for OPCML (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062257Ensembl transcript IDs: ENSMUST00000073822.6, ENSMUST00000115243.9
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGATTGTGAGTAGCTCTCAATCTTTCCTTCTCCACCTAGTGGTGTaGAACAACCATGTGCCTAAAGAGGGCACCACTCCGGGGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: RIVSSSQSFLLHLVV*NNHVPKEGTTPGRR Trigger: CCTCCTCCCCGGAGTGGTGCCCTCTTTAGGCACATGGTTGTTCCACACCACTAGGTGGAGAAGGAAAGATTGAGAGCTACTCACAATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR TCA 90 bp | GAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATACCAATaGATGATTACCCTACCCTTGGTAGAACCCTGCCCATCCCAACCC | + |
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Preference number: 1 (lower is better) Translates to: EDQGSRNRFRLGAYQ*MITLPLVEPCPSQP Trigger: GGGTTGGGATGGGCAGGGTTCTACCAAGGGTAGGGTAATCATTCATTGGTATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| 3UTR TCA 90 bp | GGCATGAGCCATCTTGGTGACATACAGATGTCCATTTCCATCTGTTaGACACAGCTTCGCCCACAGCAGAAGAGCCACATACCTAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: GMSHLGDIQMSISIC*TQLRPQQKSHIPSS Trigger: AGAGCTAGGTATGTGGCTCTTCTGCTGTGGGCGAAGCTGTGTTCAACAGATGGAAATGGACATCTGTATGTCACCAAGATGGCTCATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR TCA 90 bp | AGTAAGCCAGTTCCTCCAGAGCCCCTTGTGACCTTTAATGATGTTTaGACTGTAGGCTCTCTTGTTGGCTGGGCTCTTCTTTTCCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: SKPVPPEPLVTFNDV*TVGSLVGWALLFPR Trigger: TCTTGGGAAAAGAAGAGCCCAGCCAACAAGAGAGCCTACAGTTCAAACATCATTAAAGGTCACAAGGGGCTCTGGAGGAACTGGCTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR CCA 90 bp | CTTGTTGGCTGGGCTCTTCTTTTCCCAAGAGTCAATGCTGAGAGGTaGAATCAGATCTTCTTTGTACAGGAGGCCTGCTTTGAACATAGG | + |
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Preference number: 1 (lower is better) Translates to: LVGWALLFPRVNAER*NQIFFVQEACFEHR Trigger: CCTATGTTCAAAGCAGGCCTCCTGTACAAAGAAGATCTGATTCCACCTCTCAGCATTGACTCTTGGGAAAAGAAGAGCCCAGCCAACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR GCA 90 bp | TGCAGGATGACCCTGAGTCCATACTCAACTGGGGTTTTGATGATCTaGTTGCACAAGGTAGTGAAGACCAATTTGGGCTTGTCCATTTCA | + |
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Preference number: 1 (lower is better) Translates to: CRMTLSPYSTGVLMI*LHKVVKTNLGLSIS Trigger: TGAAATGGACAAGCCCAAATTGGTCTTCACTACCTTGTGCAAGCAGATCATCAAAACCCCAGTTGAGTATGGACTCAGGGTCATCCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR CCA 90 bp | GTAGGCACATCAGAGATGCAGGATGACCCTGAGTCCATACTCAACTaGGGTTTTGATGATCTGCTTGCACAAGGTAGTGAAGACCAATTT | + |
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Preference number: 1 (lower is better) Translates to: VGTSEMQDDPESILN*GFDDLLAQGSEDQF Trigger: AAATTGGTCTTCACTACCTTGTGCAAGCAGATCATCAAAACCCCAGTTGAGTATGGACTCAGGGTCATCCTGCATCTCTGATGTGCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR CCA 90 bp | TGTGATTCCTTTTTCCTAACCTTATACCTTCCTCACACCCACCCTTaGCAAGCTAAACAAATCTGTCTAGTGGGCCTGATTGTCCACCCT | + |
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Preference number: 1 (lower is better) Translates to: CDSFFLTLYLPHTHP*QAKQICLVGLIVHP Trigger: AGGGTGGACAATCAGGCCCACTAGACAGATTTGTTTAGCTTGCCAAGGGTGGGTGTGAGGAAGGTATAAGGTTAGGAAAAAGGAATCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR GCA 90 bp | GTCAATGCTGAGAGGTGGAATCAGATCTTCTTTGTACAGGAGGCCTaGTTTGAACATAGGAATTTGGGGACATTTATCCCCAAAGCTTCG | + |
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Preference number: 1 (lower is better) Translates to: VNAERWNQIFFVQEA*FEHRNLGTFIPKAS Trigger: CGAAGCTTTGGGGATAAATGTCCCCAAATTCCTATGTTCAAAGCAGGCCTCCTGTACAAAGAAGATCTGATTCCACCTCTCAGCATTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR CCA 90 bp | AGGCTTTGCCAGAGGCAGAACACTAGCACTTTCATTGGCATACTTTaGTGGAAGAACAAATTAGCATTGGTTTGGGAAGGGGAGAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: RLCQRQNTSTFIGIL*WKNKLALVWEGEKF Trigger: AAACTTCTCCCCTTCCCAAACCAATGCTAATTTGTTCTTCCACCAAAGTATGCCAATGAAAGTGCTAGTGTTCTGCCTCTGGCAAAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR GCA 90 bp | AGGACAAAGAAAATAGGACATGTAGATGCAACTCTTATTGTGTACTaGATTGTGAGCCAAGGTGTACCATCAGGGTACTTATCATGGGAC | + |
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Preference number: 1 (lower is better) Translates to: RTKKIGHVDATLIVY*IVSQGVPSGYLSWD Trigger: GTCCCATGATAAGTACCCTGATGGTACACCTTGGCTCACAATGCAGTACACAATAAGAGTTGCATCTACATGTCCTATTTTCTTTGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| 3UTR GCA 90 bp | TATTACTTACACTTCCCCTCTGTTTGCCATGTTGTGTTAATCAAGTaGTTGGAAATTAAGTCAGTAGCTCAAGTGCCCTCAGCTCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: YYLHFPSVCHVVLIK*LEIKSVAQVPSAQK Trigger: CTTCTGAGCTGAGGGCACTTGAGCTACTGACTTAATTTCCAAGCACTTGATTAACACAACATGGCAAACAGAGGGGAAGTGTAAGTAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR CCA 90 bp | TGGCATAGGAAATTGTTCTTCTGGGTAGTTAGCCTGCAAGACCACTaGCTTTCACATAAGAAGTTGCTAGGCAATTTTGAAGGTGGAAAT | + |
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Preference number: 1 (lower is better) Translates to: WHRKLFFWVVSLQDH*LSHKKLLGNFEGGN Trigger: ATTTCCACCTTCAAAATTGCCTAGCAACTTCTTATGTGAAAGCCAGTGGTCTTGCAGGCTAACTACCCAGAAGAACAATTTCCTATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR CCA 90 bp | ATTGCTACTTTGGTCCATCTGTTCACAAGGTCTAATTTGGGTGGATaGGTTACTGCATTCTCAAGGATCCATGGCATAGGAAATTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: IATLVHLFTRSNLGG*VTAFSRIHGIGNCS Trigger: AGAACAATTTCCTATGCCATGGATCCTTGAGAATGCAGTAACCCATCCACCCAAATTAGACCTTGTGAACAGATGGACCAAAGTAGCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR CCA 90 bp | ATCACATGGAGTCATCCTTACCAAAGTCACTCAAATAACAAGAGCTaGGGCACATTTGCTGTGAGGAAGTCACTTTTATATCTGGTACTC | + |
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Preference number: 1 (lower is better) Translates to: ITWSHPYQSHSNNKS*GTFAVRKSLLYLVL Trigger: GAGTACCAGATATAAAAGTGACTTCCTCACAGCAAATGTGCCCCAGCTCTTGTTATTTGAGTGACTTTGGTAAGGATGACTCCATGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR TCA 90 bp | CTTACCAAAGTCACTCAAATAACAAGAGCTGGGGCACATTTGCTGTaGGGAAGTCACTTTTATATCTGGTACTCAGTTGCCTTTAGTCAT | + |
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Preference number: 1 (lower is better) Translates to: LTKVTQITRAGAHLL*GSHFYIWYSVAFSH Trigger: ATGACTAAAGGCAACTGAGTACCAGATATAAAAGTGACTTCCTCACAGCAAATGTGCCCCAGCTCTTGTTATTTGAGTGACTTTGGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR TCA 90 bp | TCCTATTGTAGGCAGGTTTGCTATTCCTTCTTGCTGAGGACAATGTaGCCAGATGGATATAGAAAGAGATCATTAAAATGCAGCCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: SYCRQVCYSFLLRTM*PDGYRKRSLKCSLS Trigger: ACTGAGGCTGCATTTTAATGATCTCTTTCTATATCCATCTGGTCACATTGTCCTCAGCAAGAAGGAATAGCAAACCTGCCTACAATAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR GCA 90 bp | TCATTTATGCTCCCAGAGTCTCATTCTTGGCAGCTCACTAGGAAATaGAGATGTCTGTTTACAGCTGGCAAGAAGAGTATTAATTTTGCT | + |
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Preference number: 1 (lower is better) Translates to: SFMLPESHSWQLTRK*RCLFTAGKKSINFA Trigger: AGCAAAATTAATACTCTTCTTGCCAGCTGTAAACAGACATCTGCATTTCCTAGTGAGCTGCCAAGAATGAGACTCTGGGAGCATAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR GCA 90 bp | CTTCTGGAAGTTGGAATAAATAGACTGTTTTTGGCACATCATTTATaGTCCCAGAGTCTCATTCTTGGCAGCTCACTAGGAAATGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: LLEVGINRLFLAHHL*SQSLILGSSLGNAD Trigger: ATCTGCATTTCCTAGTGAGCTGCCAAGAATGAGACTCTGGGAGCATAAATGATGTGCCAAAAACAGTCTATTTATTCCAACTTCCAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR CCA 90 bp | TTTCTGAAACAAATACCAGAGTTGTCAACACACACGCCACGTAATTaGCCTCCATCAGCCCTTGGCTGGATAATTTTCAAACAATTCAAA | + |
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Preference number: 1 (lower is better) Translates to: FLKQIPELSTHTPRN*PPSALGWIIFKQFK Trigger: TTTGAATTGTTTGAAAATTATCCAGCCAAGGGCTGATGGAGGCCAATTACGTGGCGTGTGTGTTGACAACTCTGGTATTTGTTTCAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR TCA 90 bp | CTCTTCACTAACACAAGGGCAGCTATTACTTACCACTGTTATTATTaGGATTCTTATGCTCTGCCAAATAACCTAGAATGGAGCTCCACA | + |
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Preference number: 1 (lower is better) Translates to: LFTNTRAAITYHCYY*DSYALPNNLEWSST Trigger: TGTGGAGCTCCATTCTAGGTTATTTGGCAGAGCATAAGAATCTCAATAATAACAGTGGTAAGTAATAGCTGCCCTTGTGTTAGTGAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR GCA 90 bp | AGAAACAGCCCAGGAAAACAGTATTACTTACACTTCCCCTCTGTTTaGCATGTTGTGTTAATCAAGTGCTTGGAAATTAAGTCAGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: RNSPGKQYYLHFPSV*HVVLIKCLEIKSVA Trigger: AGCTACTGACTTAATTTCCAAGCACTTGATTAACACAACATGGCAAACAGAGGGGAAGTGTAAGTAATACTGTTTTCCTGGGCTGTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR GCA 90 bp | TGTCTTATTGAAAGCTTAAAGGACAAAGAAAATAGGACATGTAGATaGAACTCTTATTGTGTACTGCATTGTGAGCCAAGGTGTACCATC | + |
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Preference number: 1 (lower is better) Translates to: CLIESLKDKENRTCR*NSYCVLHCEPRCTI Trigger: GATGGTACACCTTGGCTCACAATGCAGTACACAATAAGAGTTGCATCTACATGTCCTATTTTCTTTGTCCTTTAAGCTTTCAATAAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCCTAAAGAGGGCACCACTCCGGGGAGGAGGGGCAGGAAGTCTCTTCCAATCCATTTCCATCTGTTaGACACAGCTTCGCCCACAG | + |
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Preference number: 2 (lower is better) Translates to: MCLKRAPLRGGGAGSLFQSISIC*TQLRPQ Trigger: CTGTGGGCGAAGCTGTGTTCAACAGATGGAAATGGA...TTGGAAGAGACTTCCTGCCCCTCCTCCCCGGAGTGGTGCCCTCTTTAGGCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCCTAAAGAGGGCACCACTCCGGGGAGGAGGGGCAGGAAGTCTCTTCCAACCAGAGTCTCATTCTTaGCAGCTCACTAGGAAATGC | + |
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Preference number: 2 (lower is better) Translates to: MCLKRAPLRGGGAGSLFQPESHS*QLTRKC Trigger: GCATTTCCTAGTGAGCTGCCAAGAATGAGACTCTGG...TTGGAAGAGACTTCCTGCCCCTCCTCCCCGGAGTGGTGCCCTCTTTAGGCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR CCA 90 bp | CCAACCCAATCCCAGGTGCTGAGCGTGGTGACAGATCTGAAATTCATATATCCGCACACGCCACGTAATTaGCCTCCATCAGCCCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: PTQSQVLSVVTDLKFIYPHTPRN*PPSALG Trigger: GCCAAGGGCTGATGGAGGCCAATTACGTGGCGTGTG...CGGATATATGAATTTCAGATCTGTCACCACGCTCAGCACCTGGGATTGGGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCCTAAAGAGGGCACCACTCCGGGGAGGAGGGGCAGGAAGTCTCTTCCAATTTCTACTTGGCTTTTaGTTTTTCTCCCAGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: MCLKRAPLRGGGAGSLFQFLLGF*FFSQTE Trigger: CTCTGTCTGGGAGAAAAATCAAAAGCCAAGTAGAAA...TTGGAAGAGACTTCCTGCCCCTCCTCCCCGGAGTGGTGCCCTCTTTAGGCACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCCTAAAGAGGGCACCACTCCGGGGAGGAGGGGCAGGAAGTCTCTTCCAACCTATGACCATATTTTaGAAACTAACTTCCCAACCT | + |
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Preference number: 2 (lower is better) Translates to: MCLKRAPLRGGGAGSLFQPMTIF*KLTSQP Trigger: AGGTTGGGAAGTTAGTTTTCAAAATATGGTCATAGG...TTGGAAGAGACTTCCTGCCCCTCCTCCCCGGAGTGGTGCCCTCTTTAGGCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR GCA 90 bp | ATGTGCCTAAAGAGGGCACCACTCCGGGGAGGAGGGGCAGGAAGTCTCTTCCAATGCCACATTTGTAATTaGAAATCTAGTTCTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: MCLKRAPLRGGGAGSLFQCHICN*KSSSPS Trigger: GGAAGGAGAACTAGATTTGCAATTACAAATGTGGCA...TTGGAAGAGACTTCCTGCCCCTCCTCCCCGGAGTGGTGCCCTCTTTAGGCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR GCA 90 bp | GTAGAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATACCTGGAGAAGCAGGCGATaGTCAGAGGACCTATGGTTT | + |
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Preference number: 2 (lower is better) Translates to: VEKRKTKVAGIDSVWGHTWRSRR*SEDLWF Trigger: AAACCATAGGTCCTCTGAGCATCGCCTGCTTCTCCA...GGTATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| 3UTR CAA 90 bp | CATCAGAGATGCAGGATGACCCTGAGTCCATACTCAACTGGGGTTTaGATGATCTGCTTGCACAAGGTAGTGAAGACCAATTTGGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: HQRCRMTLSPYSTGV*MICLHKVVKTNLGL Trigger: CAAGCCCAAATTGGTCTTCACTACCTTGTGCAAGCAGATCATCAAAACCCCAGTTGAGTATGGACTCAGGGTCATCCTGCATCTCTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGTAGTTAGCCTGCAAGACCACTGGCTTTCACATAAGAAGTTGCTAGGCAATTGGAGAAGCAGGCGATaGTCAGAGGACCTATGGTTT | + |
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Preference number: 2 (lower is better) Translates to: WVVSLQDHWLSHKKLLGNWRSRR*SEDLWF Trigger: AAACCATAGGTCCTCTGAGCATCGCCTGCTTCTCCA...ATTGCCTAGCAACTTCTTATGTGAAAGCCAGTGGTCTTGCAGGCTAACTACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAGGAAGCAGCTGCTGTCCTGTCAGCTCCCATCACATGGAGTCATCCTTACCAGGAAATTGTTCTTCTaGGTAGTTAGCCTGCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: FRKQLLSCQLPSHGVILTRKLFF*VVSLQD Trigger: GTCTTGCAGGCTAACTACCCAGAAGAACAATTTCCT...GGTAAGGATGACTCCATGTGATGGGAGCTGACAGGACAGCAGCTGCTTCCTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCTGTCAGCTCCCATCACATGGAGTCATCCTTACCAAAGTCACTCAAATAGGCTCTCTTGTTGGCTaGGCTCTTCTTTTCCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: LSCQLPSHGVILTKVTQIGSLVG*ALLFPR Trigger: TCTTGGGAAAAGAAGAGCCCAGCCAACAAGAGAGCC...TATTTGAGTGACTTTGGTAAGGATGACTCCATGTGATGGGAGCTGACAGGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCTCACTAGGAAATGCAGATGTCTGTTTACAGCTGGCAAGAAGAGTATTACTTTTCTTGAAAGGCTaGGAGAAGCACGGGGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: GSSLGNADVCLQLARRVLLFLKG*EKHGVG Trigger: ACCAACCCCGTGCTTCTCTCAGCCTTTCAAGAAAAG...TAATACTCTTCTTGCCAGCTGTAAACAGACATCTGCATTTCCTAGTGAGCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCTGTCAGCTCCCATCACATGGAGTCATCCTTACCAAAGTCACTCAAATAAAGCCCAAACTGGTTTaGCCTCCGCAGTGTAGATTA | + |
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Preference number: 2 (lower is better) Translates to: LSCQLPSHGVILTKVTQIKPKLV*PPQCRL Trigger: TAATCTACACTGCGGAGGGCAAACCAGTTTGGGCTT...TATTTGAGTGACTTTGGTAAGGATGACTCCATGTGATGGGAGCTGACAGGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR CAA 90 bp | ATGCTGAGAGGTGGAATCAGATCTTCTTTGTACAGGAGGCCTGCTTaGAACATAGGAATTTGGGGACATTTATCCCCAAAGCTTCGAGAG | + |
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Preference number: 2 (lower is better) Translates to: MLRGGIRSSLYRRPA*NIGIWGHLSPKLRE Trigger: CTCTCGAAGCTTTGGGGATAAATGTCCCCAAATTCCTATGTTCAAAGCAGGCCTCCTGTACAAAGAAGATCTGATTCCACCTCTCAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR CAA 90 bp | GTCATTTCTACTTGGCTTTTGATTTTTCTCCCAGACAGAGGAGGATaGACTGCAGCATGTGTTTCCTTCGGAAGTTTGGCTGGAGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: VISTWLLIFLPDRGG*TAACVSFGSLAGVG Trigger: ACCTACTCCAGCCAAACTTCCGAAGGAAACACATGCTGCAGTCAATCCTCCTCTGTCTGGGAGAAAAATCAAAAGCCAAGTAGAAATGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR TCA 90 bp | CCAACCCAATCCCAGGTGCTGAGCGTGGTGACAGATCTGAAATTCATATATCCGGTTTCCCCAAGTTCCTaGCATGTACTTTTCTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: PTQSQVLSVVTDLKFIYPVSPSS*HVLFLK Trigger: TTTCAAGAAAAGTACATGTCAGGAACTTGGGGAAAC...CGGATATATGAATTTCAGATCTGTCACCACGCTCAGCACCTGGGATTGGGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGCACATCACCCAACACTTTTCAGTTTCCATGGCATCCACATTTCCTTTTCTAAAAGAAGCCCAAACTaGTTTGCCCTCCGCAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: AAHHPTLFSFHGIHISFSKRSPN*FALRSV Trigger: TACACTGCGGAGGGCAAACCAGTTTGGGCTTCTTTT...AGAAAAGGAAATGTGGATGCCATGGAAACTGAAAAGTGTTGGGTGATGTGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGCACATCACCCAACACTTTTCAGTTTCCATGGCATCCACATTTCCTTTTCTGACATGTACTTTTCTTaGAAGGCTGAGAGAAGCACG | + |
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Preference number: 2 (lower is better) Translates to: AAHHPTLFSFHGIHISFSDMYFS*KAERST Trigger: CGTGCTTCTCTCAGCCTTTCAAGAAAAGTACATGTC...AGAAAAGGAAATGTGGATGCCATGGAAACTGAAAAGTGTTGGGTGATGTGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR GCA 90 bp | GCTCTAAGGGAAATGAACTCTAATGGAGCCCACAGTCATTTAGTTTTTAGAGGTGGGTGGATGGGTTACTaGATTCTCAAGGATCCATGG | + |
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Preference number: 2 (lower is better) Translates to: ALREMNSNGAHSHLVFRGGWMGY*ILKDPW Trigger: CCATGGATCCTTGAGAATGCAGTAACCCATCCACCC...ACCTCTAAAAACTAAATGACTGTGGGCTCCATTAGAGTTCATTTCCCTTAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR GCA 90 bp | TGTAGCGTTGGGTACATATATAGTCTCAATTCTGTAAGTCTTACAGCTAGTGGCAAGCCCAAACTGGTTTaGCCTCCGCAGTGTAGATTA | + |
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Preference number: 2 (lower is better) Translates to: CSVGYIYSLNSVSLTASGKPKLV*PPQCRL Trigger: TAATCTACACTGCGGAGGGCAAACCAGTTTGGGCTT...GCCACTAGCTGTAAGACTTACAGAATTGAGACTATATATGTACCCAACGCTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| 3UTR-3UTR GCA 90 bp | GGCAGCTCACTAGGAAATGCAGATGTCTGTTTACAGCTGGCAAGAAGAGTATTAGCTGAGCTTTTTGTATaGCAAAGAAGCCTGCATTTG | + |
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Preference number: 2 (lower is better) Translates to: GSSLGNADVCLQLARRVLAELFV*QRSLHL Trigger: CAAATGCAGGCTTCTTTGGCATACAAAAAGCTCAGC...TAATACTCTTCTTGCCAGCTGTAAACAGACATCTGCATTTCCTAGTGAGCTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR CCA 90 bp | TATGAGGCTGGTATTAGCCATATAGGCTACGAAGAGCATGTGTTCTTTGTCCCTTTAAAGTCTGTGATATaGAGAAGCAGGCGATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: YEAGISHIGYEEHVFFVPLKSVI*RSRRCS Trigger: TGAGCATCGCCTGCTTCTCCATATCACAGACTTTAA...AGGGACAAAGAACACATGCTCTTCGTAGCCTATATGGCTAATACCAGCCTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| 3UTR-3UTR CCA 90 bp | TGTAGCGTTGGGTACATATATAGTCTCAATTCTGTAAGTCTTACAGCTAGTGGCAAAAGAAGCCCAAACTaGTTTGCCCTCCGCAGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: CSVGYIYSLNSVSLTASGKRSPN*FALRSV Trigger: TACACTGCGGAGGGCAAACCAGTTTGGGCTTCTTTT...GCCACTAGCTGTAAGACTTACAGAATTGAGACTATATATGTACCCAACGCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCTCAATCTTTCCTTCTCCACCTAGTGGTGTGGAACAACCATGTGCCTAAACCATCAGCCCTTGGCTaGATAATTTTCAAACAATTC | + |
|
Preference number: 2 (lower is better) Translates to: SSQSFLLHLVVWNNHVPKPSALG*IIFKQF Trigger: GAATTGTTTGAAAATTATCCAGCCAAGGGCTGATGG...TTTAGGCACATGGTTGTTCCACACCACTAGGTGGAGAAGGAAAGATTGAGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CCA 90 bp | AATAATTGTGAAAATGGGTACACCCATTGTCCAACACATCTATTAACGGCACCATGTAGGCTCTCTTGTTaGCTGGGCTCTTCTTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: NNCENGYTHCPTHLLTAPCRLSC*LGSSFP Trigger: GGGAAAAGAAGAGCCCAGCCAACAAGAGAGCCTACA...TGGTGCCGTTAATAGATGTGTTGGACAATGGGTGTACCCATTTTCACAATTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTAATTCCAACAAGAGTAGCTCTGGAGGGGAAAAGGGTATTCTGGGTATTGTCTATATGTCCCTACTGTaGGTTTTGTACTTCTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: SNSNKSSSGGEKGILGIVYMSLL*VLYFCG Trigger: GCCACAGAAGTACAAAACCCACAGTAGGGACATATA...GACAATACCCAGAATACCCTTTTCCCCTCCAGAGCTACTCTTGTTGGAATTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CAA 90 bp | TTCTTTTCCCAAGAGTCAATGCTGAGAGGTGGAATCAGATCTTCTTaGTACAGGAGGCCTGCTTTGAACATAGGAATTTGGGGACATTTA | + |
|
Preference number: 2 (lower is better) Translates to: FFSQESMLRGGIRSS*YRRPALNIGIWGHL Trigger: TAAATGTCCCCAAATTCCTATGTTCAAAGCAGGCCTCCTGTACAAAGAAGATCTGATTCCACCTCTCAGCATTGACTCTTGGGAAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAGCTAAACAAATCTGTCTAGTGGGCCTGATTGTCCACCCTTCATGTATATGGAATTCAAATCAAAACTaGAGCAGTAGGGAGATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: QAKQICLVGLIVHPSCIWNSNQN*SSREML Trigger: CAGCATCTCCCTACTGCTCCAGTTTTGATTTGAATT...CCATATACATGAAGGGTGGACAATCAGGCCCACTAGACAGATTTGTTTAGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCACATCACCCAACACTTTTCAGTTTCCATGGCATCCACATTTCCTTTTCTGTCAATGCTGAGAGGTaGAATCAGATCTTCTTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: AAHHPTLFSFHGIHISFSVNAER*NQIFFV Trigger: TACAAAGAAGATCTGATTCCACCTCTCAGCATTGAC...AGAAAAGGAAATGTGGATGCCATGGAAACTGAAAAGTGTTGGGTGATGTGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAGCTAAACAAATCTGTCTAGTGGGCCTGATTGTCCACCCTTCATGTATATGGTTGAACATAGGAATTTaGGGACATTTATCCCCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QAKQICLVGLIVHPSCIWLNIGI*GHLSPK Trigger: CTTTGGGGATAAATGTCCCCAAATTCCTATGTTCAA...CCATATACATGAAGGGTGGACAATCAGGCCCACTAGACAGATTTGTTTAGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCTCAATCTTTCCTTCTCCACCTAGTGGTGTGGAACAACCATGTGCCTAAAATTGGCATACTTTGGTaGAAGAACAAATTAGCATTG | + |
|
Preference number: 2 (lower is better) Translates to: SSQSFLLHLVVWNNHVPKIGILW*KNKLAL Trigger: CAATGCTAATTTGTTCTTCCACCAAAGTATGCCAAT...TTTAGGCACATGGTTGTTCCACACCACTAGGTGGAGAAGGAAAGATTGAGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CAA 90 bp | AGTTATGAAGGTCCTAGAATTCCAAACCAAACCTATGACCATATTTaGAAAACTAACTTCCCAACCTGTGAACAACAGCCCAAAGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SYEGPRIPNQTYDHI*KTNFPTCEQQPKAV Trigger: CACTGCTTTGGGCTGTTGTTCACAGGTTGGGAAGTTAGTTTTCAAAATATGGTCATAGGTTTGGTTTGGAATTCTAGGACCTTCATAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTCTAAGGGAAATGAACTCTAATGGAGCCCACAGTCATTTAGTTTTTAGAGGTCTCAGAAGAGCTTTCTaGAACAAATACCAGAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: ALREMNSNGAHSHLVFRGLRRAF*NKYQSC Trigger: ACAACTCTGGTATTTGTTTCAGAAAGCTCTTCTGAG...ACCTCTAAAAACTAAATGACTGTGGGCTCCATTAGAGTTCATTTCCCTTAGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CCA 90 bp | AATGGGTACACCCATTGTCCAACACATCTATTAACGGCACCATTGATAATCTTAACTTTTCAGTTTCCATaGCATCCACATTTCCTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: NGYTHCPTHLLTAPLIILTFQFP*HPHFLF Trigger: GAAAAGGAAATGTGGATGCCATGGAAACTGAAAAGT...TAAGATTATCAATGGTGCCGTTAATAGATGTGTTGGACAATGGGTGTACCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR GCA 90 bp | AATAATTGTGAAAATGGGTACACCCATTGTCCAACACATCTATTAACGGCACCAAGTAGAAAACGCAAATaGCATGTTTATGTCTCATAC | + |
|
Preference number: 2 (lower is better) Translates to: NNCENGYTHCPTHLLTAPSRKRK*HVYVSY Trigger: GTATGAGACATAAACATGGCATTTGCGTTTTCTACT...TGGTGCCGTTAATAGATGTGTTGGACAATGGGTGTACCCATTTTCACAATTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGAAAAAGACAGGTTATGTAGAACTAGATGGAGCCACAAATCAATTGAGTAAAAATAGGACATGTAGATaGAACTCTTATTGTGTACTG | + |
|
Preference number: 2 (lower is better) Translates to: EKKTGYVELDGATNQLSKNRTCR*NSYCVL Trigger: CAGTACACAATAAGAGTTGCATCTACATGTCCTATT...TTTACTCAATTGATTTGTGGCTCCATCTAGTTCTACATAACCTGTCTTTTTCTC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR GCA 72 bp | AAATGCAGCATAATCAAGGCTTTCCCAGGGCTGACCTaGCTCCTGAGAAGGTGGCTTAGGGAACAGCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: KCSIIKAFPGLT*LLRRWLREQPL Trigger: GAGAGGCTGTTCCCTAAGCCACCTTCTCAGGAGGCAGGTCAGCCCTGGGAAAGCCTTGATTATGCTGCATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAACCCAATCCCAGGTGCTGAGCGTGGTGACAGATCTGAAATTCATATATCCGATGATTACCCTACCCTaGGTAGAACCCTGCCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: PTQSQVLSVVTDLKFIYPMITLP*VEPCPS Trigger: GGATGGGCAGGGTTCTACCAAGGGTAGGGTAATCAT...CGGATATATGAATTTCAGATCTGTCACCACGCTCAGCACCTGGGATTGGGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CCA 72 bp | AGTAGCTCTCAATCTTTCCTTCTCCACCTAGTGGTGTaGAACAACCATGTGCCTAAAGAGGGCACCACTCCG | + |
|
Preference number: 3 (lower is better) Translates to: SSSQSFLLHLVV*NNHVPKEGTTP Trigger: CGGAGTGGTGCCCTCTTTAGGCACATGGTTGTTCCACACCACTAGGTGGAGAAGGAAAGATTGAGAGCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CAA 90 bp | GTAGAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATACCATGATTACCCTACCCTaGGTAGAACCCTGCCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: VEKRKTKVAGIDSVWGHTMITLP*VEPCPS Trigger: GGATGGGCAGGGTTCTACCAAGGGTAGGGTAATCAT...GGTATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| 3UTR TCA 72 bp | GGTAGCAGGAATAGATTCCGTTTGGGGGCATACCAATaGATGATTACCCTACCCTTGGTAGAACCCTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GSRNRFRLGAYQ*MITLPLVEPCP Trigger: TGGGCAGGGTTCTACCAAGGGTAGGGTAATCATTCATTGGTATGCCCCCAAACGGAATCTATTCCTGCTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGGAAGCAGCTGCTGTCCTGTCAGCTCCCATCACATGGAGTCATCCTTACCTACTCAACTGGGGTTTaGATGATCTGCTTGCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: FRKQLLSCQLPSHGVILTYSTGV*MICLHK Trigger: CTTGTGCAAGCAGATCATCAAAACCCCAGTTGAGTA...GGTAAGGATGACTCCATGTGATGGGAGCTGACAGGACAGCAGCTGCTTCCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR TCA 72 bp | TGTTGGCTGGGCTCTTCTTTTCCCAAGAGTCAATGCTaGGAGGTGGAATCAGATCTTCTTTGTACAGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CWLGSSFPKSQC*EVESDLLCTGG Trigger: GCCTCCTGTACAAAGAAGATCTGATTCCACCTCTCAGCATTGACTCTTGGGAAAAGAAGAGCCCAGCCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR TCA 72 bp | GTTCCTCCAGAGCCCCTTGTGACCTTTAATGATGTTTaGACTGTAGGCTCTCTTGTTGGCTGGGCTCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VPPEPLVTFNDV*TVGSLVGWALL Trigger: AAGAAGAGCCCAGCCAACAAGAGAGCCTACAGTTCAAACATCATTAAAGGTCACAAGGGGCTCTGGAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CCA 72 bp | GTTTGCCCTCCGCAGTGTAGATTAAAGTCTGTGATATaGAGAAGCAGGCGATGCTCAGAGGACCTATGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VCPPQCRLKSVI*RSRRCSEDLWF Trigger: AAACCATAGGTCCTCTGAGCATCGCCTGCTTCTCCATATCACAGACTTTAATCTACACTGCGGAGGGCAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCTCAATCTTTCCTTCTCCACCTAGTGGTGTGGAACAACCATGTGCCTAAATACAGGAGGCCTGCTTaGAACATAGGAATTTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSQSFLLHLVVWNNHVPKYRRPA*NIGIWG Trigger: TCCCCAAATTCCTATGTTCAAAGCAGGCCTCCTGTA...TTTAGGCACATGGTTGTTCCACACCACTAGGTGGAGAAGGAAAGATTGAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CCA 72 bp | TGGGCTCTTCTTTTCCCAAGAGTCAATGCTGAGAGGTaGAATCAGATCTTCTTTGTACAGGAGGCCTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: WALLFPRVNAER*NQIFFVQEACF Trigger: AAAGCAGGCCTCCTGTACAAAGAAGATCTGATTCCACCTCTCAGCATTGACTCTTGGGAAAAGAAGAGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CCA 72 bp | TCAGAGATGCAGGATGACCCTGAGTCCATACTCAACTaGGGTTTTGATGATCTGCTTGCACAAGGTAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SEMQDDPESILN*GFDDLLAQGSE Trigger: TTCACTACCTTGTGCAAGCAGATCATCAAAACCCCAGTTGAGTATGGACTCAGGGTCATCCTGCATCTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR TCA 72 bp | CCACTCCACATTCTTTTGGCCTCCATATTCTGCACCTaGAGGCTAAATTGCACCGGTTCTGCTGTATCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PLHILLASIFCT*RLNCTGSAVSF Trigger: AAAAGATACAGCAGAACCGGTGCAATTTAGCCTTCAGGTGCAGAATATGGAGGCCAAAAGAATGTGGAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CCA 72 bp | TTTGGGTGGATGGGTTACTGCATTCTCAAGGATCCATaGCATAGGAAATTGTTCTTCTGGGTAGTTAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FGWMGYCILKDP*HRKLFFWVVSL Trigger: CAGGCTAACTACCCAGAAGAACAATTTCCTATGCCATGGATCCTTGAGAATGCAGTAACCCATCCACCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CCA 72 bp | CAAATACCAGAGTTGTCAACACACACGCCACGTAATTaGCCTCCATCAGCCCTTGGCTGGATAATTTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: QIPELSTHTPRN*PPSALGWIIFK Trigger: TTTGAAAATTATCCAGCCAAGGGCTGATGGAGGCCAATTACGTGGCGTGTGTGTTGACAACTCTGGTATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR TCA 72 bp | GGTGGCTTAGGGAACAGCCTCTCTGAAAATCATGAGTaGCTGATCTTTAGATTGCTACTTTGGTCCATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GGLGNSLSENHE*LIFRLLLWSIC Trigger: ACAGATGGACCAAAGTAGCAATCTAAAGATCAGTCACTCATGATTTTCAGAGAGGCTGTTCCCTAAGCCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR TCA 72 bp | GTCACTCAAATAACAAGAGCTGGGGCACATTTGCTGTaGGGAAGTCACTTTTATATCTGGTACTCAGTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: VTQITRAGAHLL*GSHFYIWYSVA Trigger: GGCAACTGAGTACCAGATATAAAAGTGACTTCCTCACAGCAAATGTGCCCCAGCTCTTGTTATTTGAGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR GCA 72 bp | CACTTCCCCTCTGTTTGCCATGTTGTGTTAATCAAGTaGTTGGAAATTAAGTCAGTAGCTCAAGTGCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HFPSVCHVVLIK*LEIKSVAQVPS Trigger: TGAGGGCACTTGAGCTACTGACTTAATTTCCAAGCACTTGATTAACACAACATGGCAAACAGAGGGGAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CCA 72 bp | ATTCTCAAGGATCCATGGCATAGGAAATTGTTCTTCTaGGTAGTTAGCCTGCAAGACCACTGGCTTTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: ILKDPWHRKLFF*VVSLQDHWLSH Trigger: ATGTGAAAGCCAGTGGTCTTGCAGGCTAACTACCCAGAAGAACAATTTCCTATGCCATGGATCCTTGAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CCA 72 bp | TCTTTGTACAGGAGGCCTGCTTTGAACATAGGAATTTaGGGACATTTATCCCCAAAGCTTCGAGAGAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: SLYRRPALNIGI*GHLSPKLREKQ Trigger: CTGTTTCTCTCGAAGCTTTGGGGATAAATGTCCCCAAATTCCTATGTTCAAAGCAGGCCTCCTGTACAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CCA 72 bp | TTTTTCCTAACCTTATACCTTCCTCACACCCACCCTTaGCAAGCTAAACAAATCTGTCTAGTGGGCCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: FFLTLYLPHTHP*QAKQICLVGLI Trigger: AATCAGGCCCACTAGACAGATTTGTTTAGCTTGCCAAGGGTGGGTGTGAGGAAGGTATAAGGTTAGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CCA 72 bp | AGGCAGAACACTAGCACTTTCATTGGCATACTTTGGTaGAAGAACAAATTAGCATTGGTTTGGGAAGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RQNTSTFIGILW*KNKLALVWEGE Trigger: CTCCCCTTCCCAAACCAATGCTAATTTGTTCTTCCACCAAAGTATGCCAATGAAAGTGCTAGTGTTCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCTCAATCTTTCCTTCTCCACCTAGTGGTGTGGAACAACCATGTGCCTAAAAGGTGGAAATGTCTATaGATGGTAGTAGAGATATGG | + |
|
Preference number: 3 (lower is better) Translates to: SSQSFLLHLVVWNNHVPKRWKCL*MVVEIW Trigger: CCATATCTCTACTACCATCAATAGACATTTCCACCT...TTTAGGCACATGGTTGTTCCACACCACTAGGTGGAGAAGGAAAGATTGAGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CCA 72 bp | GTGAATATGTATACACAGGTATATATGTCCCTACTGTaGGTTTTGTACTTCTGTGGCCATAGTGCCACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VNMYTQVYMSLL*VLYFCGHSATE Trigger: CTCTGTGGCACTATGGCCACAGAAGTACAAAACCCACAGTAGGGACATATATACCTGTGTATACATATTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CCA 72 bp | TTTGGCACATCATTTATGCTCCCAGAGTCTCATTCTTaGCAGCTCACTAGGAAATGCAGATGTCTGTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: FGTSFMLPESHS*QLTRKCRCLFT Trigger: TGTAAACAGACATCTGCATTTCCTAGTGAGCTGCCAAGAATGAGACTCTGGGAGCATAAATGATGTGCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTAAGGGAAATGAACTCTAATGGAGCCCACAGTCATTTAGTTTTTAGAGGTCCATGGCATAGGAAATaGTTCTTCTGGGTAGTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ALREMNSNGAHSHLVFRGPWHRK*FFWVVS Trigger: GCTAACTACCCAGAAGAACAATTTCCTATGCCATGG...ACCTCTAAAAACTAAATGACTGTGGGCTCCATTAGAGTTCATTTCCCTTAGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAGCTAAACAAATCTGTCTAGTGGGCCTGATTGTCCACCCTTCATGTATATGGAGAAGAGTATTAATTTaGCTCACCCCAGCTCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: QAKQICLVGLIVHPSCIWRRVLI*LTPALS Trigger: AGATAGAGCTGGGGTGAGCAAAATTAATACTCTTCT...CCATATACATGAAGGGTGGACAATCAGGCCCACTAGACAGATTTGTTTAGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCCTGTCAGCTCCCATCACATGGAGTCATCCTTACCAAAGTCACTCAAATAATTTCTACTTGGCTTTaGATTTTTCTCCCAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LSCQLPSHGVILTKVTQIISTWL*IFLPDR Trigger: TCTGTCTGGGAGAAAAATCAAAAGCCAAGTAGAAAT...TATTTGAGTGACTTTGGTAAGGATGACTCCATGTGATGGGAGCTGACAGGACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCTCAATCTTTCCTTCTCCACCTAGTGGTGTGGAACAACCATGTGCCTAAAACCTATGACCATATTTaGAAAACTAACTTCCCAACC | + |
|
Preference number: 3 (lower is better) Translates to: SSQSFLLHLVVWNNHVPKTYDHI*KTNFPT Trigger: GGTTGGGAAGTTAGTTTTCAAAATATGGTCATAGGT...TTTAGGCACATGGTTGTTCCACACCACTAGGTGGAGAAGGAAAGATTGAGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR GCA 72 bp | GTTGGAATAAATAGACTGTTTTTGGCACATCATTTATaGTCCCAGAGTCTCATTCTTGGCAGCTCACTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VGINRLFLAHHL*SQSLILGSSLG Trigger: TCCTAGTGAGCTGCCAAGAATGAGACTCTGGGAGCATAAATGATGTGCCAAAAACAGTCTATTTATTCCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGCTCACTAGGAAATGCAGATGTCTGTTTACAGCTGGCAAGAAGAGTATTAGTGTTAATCAAGTGCTaGGAAATTAAGTCAGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GSSLGNADVCLQLARRVLVLIKC*EIKSVA Trigger: AGCTACTGACTTAATTTCCAAGCACTTGATTAACAC...TAATACTCTTCTTGCCAGCTGTAAACAGACATCTGCATTTCCTAGTGAGCTGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CAA 90 bp | TATGAGGCTGGTATTAGCCATATAGGCTACGAAGAGCATGTGTTCTTTGTCCCTATATCTGGTACTCAGTaGCCTTTAGTCATTTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: YEAGISHIGYEEHVFFVPISGTQ*PLVIST Trigger: AGTAGAAATGACTAAAGGCAACTGAGTACCAGATAT...AGGGACAAAGAACACATGCTCTTCGTAGCCTATATGGCTAATACCAGCCTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR TCA 72 bp | GTCCTAGAATTCCAAACCAAACCTATGACCATATTTTaGAAACTAACTTCCCAACCTGTGAACAACAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VLEFQTKPMTIF*KLTSQPVNNSP Trigger: TGGGCTGTTGTTCACAGGTTGGGAAGTTAGTTTTCAAAATATGGTCATAGGTTTGGTTTGGAATTCTAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR TCA 72 bp | TTTCCTATTGTAGGCAGGTTTGCTATTCCTTCTTGCTaGGGACAATGTGACCAGATGGATATAGAAAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: FPIVGRFAIPSC*GQCDQMDIERD Trigger: ATCTCTTTCTATATCCATCTGGTCACATTGTCCTCAGCAAGAAGGAATAGCAAACCTGCCTACAATAGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR GCA 72 bp | AAAATAGGACATGTAGATGCAACTCTTATTGTGTACTaGATTGTGAGCCAAGGTGTACCATCAGGGTACTTA | + |
|
Preference number: 3 (lower is better) Translates to: KIGHVDATLIVY*IVSQGVPSGYL Trigger: TAAGTACCCTGATGGTACACCTTGGCTCACAATGCAGTACACAATAAGAGTTGCATCTACATGTCCTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| 3UTR CCA 72 bp | ATATCTGGTACTCAGTTGCCTTTAGTCATTTCTACTTaGCTTTTGATTTTTCTCCCAGACAGAGGAGGATTG | + |
|
Preference number: 3 (lower is better) Translates to: ISGTQLPLVIST*LLIFLPDRGGL Trigger: CAATCCTCCTCTGTCTGGGAGAAAAATCAAAAGCCAAGTAGAAATGACTAAAGGCAACTGAGTACCAGATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CAA 90 bp | AATAATTGTGAAAATGGGTACACCCATTGTCCAACACATCTATTAACGGCACCAACACATTCCTCACAATaGCACTTTACATGTCACGAA | + |
|
Preference number: 3 (lower is better) Translates to: NNCENGYTHCPTHLLTAPTHSSQ*HFTCHE Trigger: TTCGTGACATGTAAAGTGCAATTGTGAGGAATGTGT...TGGTGCCGTTAATAGATGTGTTGGACAATGGGTGTACCCATTTTCACAATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CAA 90 bp | AATAATTGTGAAAATGGGTACACCCATTGTCCAACACATCTATTAACGGCACCACCTAAATTTGTAGCGTaGGGTACATATATAGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: NNCENGYTHCPTHLLTAPPKFVA*GTYIVS Trigger: TGAGACTATATATGTACCCAACGCTACAAATTTAGG...TGGTGCCGTTAATAGATGTGTTGGACAATGGGTGTACCCATTTTCACAATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR-3UTR CAA 90 bp | AATGGGTACACCCATTGTCCAACACATCTATTAACGGCACCATTGATAATCTTAATGAGGGAAATGAGCTaGGCATTTTTATTTGTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: NGYTHCPTHLLTAPLIILMREMS*AFLFVC Trigger: GCAAACAAATAAAAATGCCAAGCTCATTTCCCTCAT...TAAGATTATCAATGGTGCCGTTAATAGATGTGTTGGACAATGGGTGTACCCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR TCA 72 bp | AAACCCACAACATTTTACCAGCTACTTAGACTAATGTaGTTCCTTTTTCCTAACCTTATACCTTCCTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: KPTTFYQLLRLM*FLFPNLIPSSH Trigger: GTGTGAGGAAGGTATAAGGTTAGGAAAAAGGAATCACATTAGTCTAAGTAGCTGGTAAAATGTTGTGGGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR TCA 72 bp | AACACAAGGGCAGCTATTACTTACCACTGTTATTATTaGGATTCTTATGCTCTGCCAAATAACCTAGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: NTRAAITYHCYY*DSYALPNNLEW Trigger: CCATTCTAGGTTATTTGGCAGAGCATAAGAATCTCAATAATAACAGTGGTAAGTAATAGCTGCCCTTGTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR TCA 72 bp | ATACACTGCACAATCACAACCATCTTGTATTCATCCTaGATTAGAAAAGGTTACAACTACAATGTAACATGC | + |
|
Preference number: 3 (lower is better) Translates to: IHCTITTILYSS*IRKGYNYNVTC Trigger: GCATGTTACATTGTAGTTGTAACCTTTTCTAATTCAGGATGAATACAAGATGGTTGTGATTGTGCAGTGTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR CCA 90 bp | AGCATAATCAAGGCTTTCCCAGGGCTGACCTGCCTCCTGAGAAGGTGGCTTAGGAGAGCAGGGCAGTGGTaGCCGAGAAGACGATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SIIKAFPGLTCLLRRWLRRAGQW*PRRRSS Trigger: ACTGGATCGTCTTCTCGGCCACCACTGCCCTGCTCT...CCTAAGCCACCTTCTCAGGAGGCAGGTCAGCCCTGGGAAAGCCTTGATTATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | ATGATTACCCTACCCTTGGTAGAACCCTGCCCATCCCAACCCCACTCATTCAAACATCTATGGTACACCTaGGGGTGGCGCTCTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: MITLPLVEPCPSQPHSFKHLWYT*GWRSPP Trigger: AGGGGGAGAGCGCCACCCTCAGGTGTACCATAGATG...TTTGAATGAGTGGGGTTGGGATGGGCAGGGTTCTACCAAGGGTAGGGTAATCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | ATGATTACCCTACCCTTGGTAGAACCCTGCCCATCCCAACCCCACTCATTCAAACTGGCCTTCCTTGACTaGCAGGTGCCTCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MITLPLVEPCPSQPHSFKLAFLD*QVPPCH Trigger: GTGACATGGAGGCACCTGTCAGTCAAGGAAGGCCAG...TTTGAATGAGTGGGGTTGGGATGGGCAGGGTTCTACCAAGGGTAGGGTAATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073822.6 |
||
| CDS-3UTR TCA 90 bp | CAAGCTAAACAAATCTGTCTAGTGGGCCTGATTGTCCACCCTTCATGTATATGGCCGGCACTCCTGGGATaGAGAGCAGGGCAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QAKQICLVGLIVHPSCIWPALLG*RAGQWW Trigger: CCACCACTGCCCTGCTCTTCATCCCAGGAGTGCCGG...CCATATACATGAAGGGTGGACAATCAGGCCCACTAGACAGATTTGTTTAGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR GCA 90 bp | TTTAGGAAGCAGCTGCTGTCCTGTCAGCTCCCATCACATGGAGTCATCCTTACCCGTCATTCAAGGCGCTaGACTCGTACTCCCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FRKQLLSCQLPSHGVILTRHSRR*TRTPQT Trigger: AGTCTGGGGAGTACGAGTGCAGCGCCTTGAATGACG...GGTAAGGATGACTCCATGTGATGGGAGCTGACAGGACAGCAGCTGCTTCCTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR CCA 90 bp | AGCTCTCAATCTTTCCTTCTCCACCTAGTGGTGTGGAACAACCATGTGCCTAAAGCGCACCGGCACTCCTaGGATGAAGAGCAGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSQSFLLHLVVWNNHVPKAHRHS*DEEQGS Trigger: ACTGCCCTGCTCTTCATCCCAGGAGTGCCGGTGCGC...TTTAGGCACATGGTTGTTCCACACCACTAGGTGGAGAAGGAAAGATTGAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTAGTTAGCCTGCAAGACCACTGGCTTTCACATAAGAAGTTGCTAGGCAATCATCTATGGTACACCTaGGGGTGGCGCTCTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WVVSLQDHWLSHKKLLGNHLWYT*GWRSPP Trigger: AGGGGGAGAGCGCCACCCTCAGGTGTACCATAGATG...ATTGCCTAGCAACTTCTTATGTGAAAGCCAGTGGTCTTGCAGGCTAACTACCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | GAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATACCAATGCCAGGCTACCCGGGTaGCCCGATCATCTATGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EKRKTKVAGIDSVWGHTNARLPG*PDHLWY Trigger: GTACCATAGATGATCGGGTCACCCGGGTAGCCTGGC...ATTGGTATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | AGCTCTCAATCTTTCCTTCTCCACCTAGTGGTGTGGAACAACCATGTGCCTAAAGCCAGGCTACCCGGGTaGCCCGATCATCTATGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSQSFLLHLVVWNNHVPKARLPG*PDHLWY Trigger: GTACCATAGATGATCGGGTCACCCGGGTAGCCTGGC...TTTAGGCACATGGTTGTTCCACACCACTAGGTGGAGAAGGAAAGATTGAGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | GAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATACCAATTCCCTGGCCCTTGACTaGCAGGTGCCTCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EKRKTKVAGIDSVWGHTNSLALD*QVPPCH Trigger: GTGACATGGAGGCACCTGTCAGTCAAGGGCCAGGGA...ATTGGTATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR GCA 90 bp | ATGATTACCCTACCCTTGGTAGAACCCTGCCCATCCCAACCCCACTCATTCAAACCAGAGACAAGCCAGTaGTCTGGAGGCCGAGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: MITLPLVEPCPSQPHSFKPETSQ*SGGRVY Trigger: GTAAACTCGGCCTCCAGAGCACTGGCTTGTCTCTGG...TTTGAATGAGTGGGGTTGGGATGGGCAGGGTTCTACCAAGGGTAGGGTAATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | GAAGTAGAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATATCCCTGGCCTTCCTTaGCTGACAGGTGCCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EVEKRKTKVAGIDSVWGHIPGLP*LTGASM Trigger: CATGGAGGCACCTGTCAGTCAAGGAAGGCCAGGGAT...ATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTCTACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073822.6 |
||
| CDS-3UTR TCA 90 bp | AGCATAATCAAGGCTTTCCCAGGGCTGACCTGCCTCCTGAGAAGGTGGCTTAGGACCTGGTATCTTCTTTaGACCACTGGAATTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIIKAFPGLTCLLRRWLRTWYLL*TTGIQP Trigger: TGGCTGAATTCCAGTGGTTCAAAGAAGATACCAGGT...CCTAAGCCACCTTCTCAGGAGGCAGGTCAGCCCTGGGAAAGCCTTGATTATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | AGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAATGGTGGTAAGAAGAGGCAAAGAAGGTCCCTaGGAGCCAGAGACAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVCVCVCVCVCVLMVVRRGKEGP*EPETSQ Trigger: CTGGCTTGTCTCTGGCTCTCAGGGACCTTCTTTGCC...TCTTCTTACCACCATTAACACACACACACACACACACACACACACACACACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | AAGCCCAAACTGGTTTGCCCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAGGCAAAGAAGGTCCCTaGGAGCCAGAGACAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPKLVCPPQCRLKSVIWRGKEGP*EPETSQ Trigger: CTGGCTTGTCTCTGGCTCTCAGGGACCTTCTTTGCC...TCTCCATATCACAGACTTTAATCTACACTGCGGAGGGCAAACCAGTTTGGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | GAAGTAGAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATGCCCTTCTGACCCACTaGAACACCAGTGTTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVEKRKTKVAGIDSVWGHALLTH*NTSVLG Trigger: GCCAAGAACACTGGTGTTTCAGTGGGTCAGAAGGGC...ATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTCTACTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR GCA 90 bp | GTAGAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATACCTCCTTGACTGACAGGTaGCTCCATGTCACCGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VEKRKTKVAGIDSVWGHTSLTDR*LHVTVG Trigger: ACCAACGGTGACATGGAGGCACCTGTCAGTCAAGGA...GGTATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073822.6 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATACCAATCCAGAGACAAGCCAGTaGTCTGGAGGCCGAGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: EKRKTKVAGIDSVWGHTNPETSQ*SGGRVY Trigger: GTAAACTCGGCCTCCAGAGCACTGGCTTGTCTCTGG...ATTGGTATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CCA 90 bp | ATGATTACCCTACCCTTGGTAGAACCCTGCCCATCCCAACCCCACTCATTCAAATCACTCACAAATCCCTaGCCTTCCTTGACTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: MITLPLVEPCPSQPHSFKSLTNP*PSLTDR Trigger: CCTGTCAGTCAAGGAAGGCCAGGGATTTGTGAGTGA...TTTGAATGAGTGGGGTTGGGATGGGCAGGGTTCTACCAAGGGTAGGGTAATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073822.6 |
||
| CDS-3UTR TCA 90 bp | TGGGTAGTTAGCCTGCAAGACCACTGGCTTTCACATAAGAAGTTGCTAGGCAATCTCAAGATGCCCTTCTaGCCCACTGAAACACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WVVSLQDHWLSHKKLLGNLKMPF*PTETPV Trigger: CACTGGTGTTTCAGTGGGTCAGAAGGGCATCTTGAG...ATTGCCTAGCAACTTCTTATGTGAAAGCCAGTGGTCTTGCAGGCTAACTACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | AGCATAATCAAGGCTTTCCCAGGGCTGACCTGCCTCCTGAGAAGGTGGCTTAGGCCTTCTCTGAGACATTaGAGAAAGTCAAAGTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: SIIKAFPGLTCLLRRWLRPSLRH*RKSKWI Trigger: TATCCACTTTGACTTTCTTCAATGTCTCAGAGAAGG...CCTAAGCCACCTTCTCAGGAGGCAGGTCAGCCCTGGGAAAGCCTTGATTATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | AAGCAGCACATCACCCAACACTTTTCAGTTTCCATGGCATCCACATTTCCTTTTCAAATCCCTGGCCCTTaGCTGACAGGTGCCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: KQHITQHFSVSMASTFPFQIPGP*LTGASM Trigger: CATGGAGGCACCTGTCAGTCAAGGGCCAGGGATTTG...AAAAGGAAATGTGGATGCCATGGAAACTGAAAAGTGTTGGGTGATGTGCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR GCA 90 bp | GAAGTAGAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATATCTGGGGAGGAACTTaGACTATGAGATGGACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EVEKRKTKVAGIDSVWGHIWGGT*TMRWTR Trigger: CCGGGTCCATCTCATAGTGCAAGTTCCTCCCCAGAT...ATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTCTACTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CCA 90 bp | AAGCCCAAACTGGTTTGCCCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGACCTCCATGTCACCGTTaGTTCTGGTCTGCCAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: KPKLVCPPQCRLKSVIWRPPCHR*FWSANC Trigger: GCAATTGGCAGACCAGAACCAACGGTGACATGGAGG...TCTCCATATCACAGACTTTAATCTACACTGCGGAGGGCAAACCAGTTTGGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CCA 90 bp | AAGCCCAAACTGGTTTGCCCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAGACAAGCCAGTGCTCTaGAGGCCGAGTTTACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KPKLVCPPQCRLKSVIWRDKPVL*RPSLHH Trigger: ATGGTGTAAACTCGGCCTCCAGAGCACTGGCTTGTC...TCTCCATATCACAGACTTTAATCTACACTGCGGAGGGCAAACCAGTTTGGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR GCA 90 bp | TCTAATTCCAACAAGAGTAGCTCTGGAGGGGAAAAGGGTATTCTGGGTATTGTCATCTGGGGAGGAACTTaGACTATGAGATGGACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SNSNKSSSGGEKGILGIVIWGGT*TMRWTR Trigger: CCGGGTCCATCTCATAGTGCAAGTTCCTCCCCAGAT...GACAATACCCAGAATACCCTTTTCCCCTCCAGAGCTACTCTTGTTGGAATTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR GCA 90 bp | AAGCCCAAACTGGTTTGCCCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGACTTCGCAGCTCAAGATaGCCTTCTGACCCACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KPKLVCPPQCRLKSVIWRLRSSR*PSDPLK Trigger: TTTCAGTGGGTCAGAAGGGCATCTTGAGCTGCGAAG...TCTCCATATCACAGACTTTAATCTACACTGCGGAGGGCAAACCAGTTTGGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR GCA 90 bp | AGCTCTCAATCTTTCCTTCTCCACCTAGTGGTGTGGAACAACCATGTGCCTAAATACACCATCAATCACTaGTCCAGGCCCATACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSQSFLLHLVVWNNHVPKYTINH*SRPIQG Trigger: ACCCTGTATGGGCCTGGAGCAGTGATTGATGGTGTA...TTTAGGCACATGGTTGTTCCACACCACTAGGTGGAGAAGGAAAGATTGAGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR CCA 90 bp | ATGATTACCCTACCCTTGGTAGAACCCTGCCCATCCCAACCCCACTCATTCAAACACAGAGCAGGTGTATaGACCTTCATCGTATACATC | + |
|
Preference number: 4 (lower is better) Translates to: MITLPLVEPCPSQPHSFKHRAGV*TFIVYI Trigger: GATGTATACGATGAAGGTCCATACACCTGCTCTGTG...TTTGAATGAGTGGGGTTGGGATGGGCAGGGTTCTACCAAGGGTAGGGTAATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CCA 90 bp | CAAGCTAAACAAATCTGTCTAGTGGGCCTGATTGTCCACCCTTCATGTATATGGGACAAGCCAGTGCTCTaGAGGCCGAGTTTACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QAKQICLVGLIVHPSCIWDKPVL*RPSLHH Trigger: ATGGTGTAAACTCGGCCTCCAGAGCACTGGCTTGTC...CCATATACATGAAGGGTGGACAATCAGGCCCACTAGACAGATTTGTTTAGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR CCA 90 bp | TCTAATTCCAACAAGAGTAGCTCTGGAGGGGAAAAGGGTATTCTGGGTATTGTCTCACTCACAAATCCCTaGCCCTTGACTGACAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNSNKSSSGGEKGILGIVSLTNP*PLTDRC Trigger: GCACCTGTCAGTCAAGGGCCAGGGATTTGTGAGTGA...GACAATACCCAGAATACCCTTTTCCCCTCCAGAGCTACTCTTGTTGGAATTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR GCA 90 bp | TCTAATTCCAACAAGAGTAGCTCTGGAGGGGAAAAGGGTATTCTGGGTATTGTCCTTCGCAGCTCAAGATaGCCTTCTGACCCACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SNSNKSSSGGEKGILGIVLRSSR*PSDPLK Trigger: TTTCAGTGGGTCAGAAGGGCATCTTGAGCTGCGAAG...GACAATACCCAGAATACCCTTTTCCCCTCCAGAGCTACTCTTGTTGGAATTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR GCA 90 bp | GCTCTAAGGGAAATGAACTCTAATGGAGCCCACAGTCATTTAGTTTTTAGAGGTCCCTTGACTGACAGGTaGCTCCATGTCACCGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALREMNSNGAHSHLVFRGPLTDR*LHVTVG Trigger: ACCAACGGTGACATGGAGGCACCTGTCAGTCAAGGG...ACCTCTAAAAACTAAATGACTGTGGGCTCCATTAGAGTTCATTTCCCTTAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR CCA 90 bp | GTAGAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATACCCACAGAGCAGGTGTATaGACCTTCATCGTATACATC | + |
|
Preference number: 4 (lower is better) Translates to: VEKRKTKVAGIDSVWGHTHRAGV*TFIVYI Trigger: GATGTATACGATGAAGGTCCATACACCTGCTCTGTG...GGTATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| 3UTR CAA 72 bp | AAAACGCAAATGCCATGTTTATGTCTCATACAATGCTaGACACCAACCCAATCCCAGGTGCTGAGCGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KTQMPCLCLIQC*TPTQSQVLSVV Trigger: CACCACGCTCAGCACCTGGGATTGGGTTGGTGTCAAGCATTGTATGAGACATAAACATGGCATTTGCGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CAA 72 bp | TGCAGGATGACCCTGAGTCCATACTCAACTGGGGTTTaGATGATCTGCTTGCACAAGGTAGTGAAGACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CRMTLSPYSTGV*MICLHKVVKTN Trigger: ATTGGTCTTCACTACCTTGTGCAAGCAGATCATCAAAACCCCAGTTGAGTATGGACTCAGGGTCATCCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | GTAGAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATACCGTCACGTTTGATGTCTaGGATTTCCAGGTATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VEKRKTKVAGIDSVWGHTVTFDV*DFQVFI Trigger: GATGAATACCTGGAAATCTCAGACATCAAACGTGAC...GGTATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | AATGGGTACACCCATTGTCCAACACATCTATTAACGGCACCATTGATAATCTTAGCCCTTCTGACCCACTaGAACACCAGTGTTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NGYTHCPTHLLTAPLIILALLTH*NTSVLG Trigger: GCCAAGAACACTGGTGTTTCAGTGGGTCAGAAGGGC...TAAGATTATCAATGGTGCCGTTAATAGATGTGTTGGACAATGGGTGTACCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | TGTAGCGTTGGGTACATATATAGTCTCAATTCTGTAAGTCTTACAGCTAGTGGCCTCAAGATGCCCTTCTaGCCCACTGAAACACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSVGYIYSLNSVSLTASGLKMPF*PTETPV Trigger: CACTGGTGTTTCAGTGGGTCAGAAGGGCATCTTGAG...GCCACTAGCTGTAAGACTTACAGAATTGAGACTATATATGTACCCAACGCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | AAGCCCAAACTGGTTTGCCCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAACCTGGTATCTTCTTTaGACCACTGGAATTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPKLVCPPQCRLKSVIWRTWYLL*TTGIQP Trigger: TGGCTGAATTCCAGTGGTTCAAAGAAGATACCAGGT...TCTCCATATCACAGACTTTAATCTACACTGCGGAGGGCAAACCAGTTTGGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | ATGATTACCCTACCCTTGGTAGAACCCTGCCCATCCCAACCCCACTCATTCAAACCCATAATCCTTCTCTaGGACATTGAAGAAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MITLPLVEPCPSQPHSFKPIILL*DIEESQ Trigger: TTGACTTTCTTCAATGTCTCAGAGAAGGATTATGGG...TTTGAATGAGTGGGGTTGGGATGGGCAGGGTTCTACCAAGGGTAGGGTAATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR GCA 90 bp | AAAATAGGACATGTAGATGCAACTCTTATTGTGTACTGCATTGTGAGCCAAGGTCGTCATTCAAGGCGCTaGACTCGTACTCCCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: KIGHVDATLIVYCIVSQGRHSRR*TRTPQT Trigger: AGTCTGGGGAGTACGAGTGCAGCGCCTTGAATGACG...ACCTTGGCTCACAATGCAGTACACAATAAGAGTTGCATCTACATGTCCTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAATGGTGGTAAGAAGATCTTCTTTGAACCACTaGAATTCAGCCATCGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RVCVCVCVCVCVLMVVRRSSLNH*NSAIGT Trigger: TGTCCCGATGGCTGAATTCCAGTGGTTCAAAGAAGA...TCTTCTTACCACCATTAACACACACACACACACACACACACACACACACACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| 3UTR CAA 72 bp | ATGTATACACAGGTATATATGTCCCTACTGTGGGTTTaGTACTTCTGTGGCCATAGTGCCACAGAGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MYTQVYMSLLWV*YFCGHSATEWA Trigger: TGCCCACTCTGTGGCACTATGGCCACAGAAGTACAAAACCCACAGTAGGGACATATATACCTGTGTATACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | GAAGTAGAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATGTCACGTTTGATGTCTaGGATTTCCAGGTATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: EVEKRKTKVAGIDSVWGHVTFDV*DFQVFI Trigger: GATGAATACCTGGAAATCTCAGACATCAAACGTGAC...ATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTCTACTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | GTAGAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATACCCCTTCTCTGAGACATTaGAGAAAGTCAAAGTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: VEKRKTKVAGIDSVWGHTPSLRH*RKSKWI Trigger: TATCCACTTTGACTTTCTTCAATGTCTCAGAGAAGG...GGTATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR GCA 90 bp | GGCAGCTCACTAGGAAATGCAGATGTCTGTTTACAGCTGGCAAGAAGAGTATTACCGTTGGTTCTGGTCTaGCAATTGCAAGACATAACA | + |
|
Preference number: 4 (lower is better) Translates to: GSSLGNADVCLQLARRVLPLVLV*QLQDIT Trigger: TGTTATGTCTTGCAATTGGCAGACCAGAACCAACGG...TAATACTCTTCTTGCCAGCTGTAAACAGACATCTGCATTTCCTAGTGAGCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR GCA 90 bp | TGTAGCGTTGGGTACATATATAGTCTCAATTCTGTAAGTCTTACAGCTAGTGGCTACACCATCAATCACTaGTCCAGGCCCATACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSVGYIYSLNSVSLTASGYTINH*SRPIQG Trigger: ACCCTGTATGGGCCTGGAGCAGTGATTGATGGTGTA...GCCACTAGCTGTAAGACTTACAGAATTGAGACTATATATGTACCCAACGCTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CCA 90 bp | TGTAGCGTTGGGTACATATATAGTCTCAATTCTGTAAGTCTTACAGCTAGTGGCTCGTACTCCCCAGACTaGTCACGTTTGATGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSVGYIYSLNSVSLTASGSYSPD*SRLMSE Trigger: CTCAGACATCAAACGTGACCAGTCTGGGGAGTACGA...GCCACTAGCTGTAAGACTTACAGAATTGAGACTATATATGTACCCAACGCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| 3UTR CAA 72 bp | GGTGGAATCAGATCTTCTTTGTACAGGAGGCCTGCTTaGAACATAGGAATTTGGGGACATTTATCCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGIRSSLYRRPA*NIGIWGHLSPK Trigger: CTTTGGGGATAAATGTCCCCAAATTCCTATGTTCAAAGCAGGCCTCCTGTACAAAGAAGATCTGATTCCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CAA 72 bp | CAAGAGTCAATGCTGAGAGGTGGAATCAGATCTTCTTaGTACAGGAGGCCTGCTTTGAACATAGGAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QESMLRGGIRSS*YRRPALNIGIW Trigger: CCAAATTCCTATGTTCAAAGCAGGCCTCCTGTACAAAGAAGATCTGATTCCACCTCTCAGCATTGACTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CAA 72 bp | TCTTTTGGCCTCCATATTCTGCACCTGAAGGCTAAATaGCACCGGTTCTGCTGTATCTTTTTGCCACATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFGLHILHLKAK*HRFCCIFLPHL Trigger: CAAATGTGGCAAAAAGATACAGCAGAACCGGTGCAATTTAGCCTTCAGGTGCAGAATATGGAGGCCAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CAA 72 bp | AGGAGGGGCAGGAAGTCTCTTCCAAAATGCTGGAGATaGGGTTTAGCTGACTACTTTCACTATGAAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: RRGRKSLPKCWR*GLADYFHYEDN Trigger: ATTGTCTTCATAGTGAAAGTAGTCAGCTAAACCCAATCTCCAGCATTTTGGAAGAGACTTCCTGCCCCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR CCA 90 bp | AATAATTGTGAAAATGGGTACACCCATTGTCCAACACATCTATTAACGGCACCATCGTACTCCCCAGACTaGTCACGTTTGATGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NNCENGYTHCPTHLLTAPSYSPD*SRLMSE Trigger: CTCAGACATCAAACGTGACCAGTCTGGGGAGTACGA...TGGTGCCGTTAATAGATGTGTTGGACAATGGGTGTACCCATTTTCACAATTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | AGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAATGGTGGTAAGAAGAGAGGGTAGTTTACAGTaGTTTTTACTTTCCGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: RVCVCVCVCVCVLMVVRREGSLQ*FLLSEH Trigger: ATGTTCGGAAAGTAAAAATCACTGTAAACTACCCTC...TCTTCTTACCACCATTAACACACACACACACACACACACACACACACACACCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | CAAGCTAAACAAATCTGTCTAGTGGGCCTGATTGTCCACCCTTCATGTATATGGCCCATAATCCTTCTCTaGGACATTGAAGAAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QAKQICLVGLIVHPSCIWPIILL*DIEESQ Trigger: TTGACTTTCTTCAATGTCTCAGAGAAGGATTATGGG...CCATATACATGAAGGGTGGACAATCAGGCCCACTAGACAGATTTGTTTAGCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR GCA 90 bp | TGTAGCGTTGGGTACATATATAGTCTCAATTCTGTAAGTCTTACAGCTAGTGGCCCGTTGGTTCTGGTCTaGCAATTGCAAGACATAACA | + |
|
Preference number: 4 (lower is better) Translates to: CSVGYIYSLNSVSLTASGPLVLV*QLQDIT Trigger: TGTTATGTCTTGCAATTGGCAGACCAGAACCAACGG...GCCACTAGCTGTAAGACTTACAGAATTGAGACTATATATGTACCCAACGCTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| 3UTR CAA 72 bp | GGTCCTAGAATTCCAAACCAAACCTATGACCATATTTaGAAAACTAACTTCCCAACCTGTGAACAACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPRIPNQTYDHI*KTNFPTCEQQP Trigger: GGGCTGTTGTTCACAGGTTGGGAAGTTAGTTTTCAAAATATGGTCATAGGTTTGGTTTGGAATTCTAGGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAATGGTGGTAAGAAGATATACATCCACATTCTaGATCATGATACTGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVCVCVCVCVCVLMVVRRYTSTF*IMILYW Trigger: CCAATACAGTATCATGATCCAGAATGTGGATGTATA...TCTTCTTACCACCATTAACACACACACACACACACACACACACACACACACCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CCA 90 bp | AAAATAGGACATGTAGATGCAACTCTTATTGTGTACTGCATTGTGAGCCAAGGTTCTTCTTTGAACCACTaGAATTCAGCCATCGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KIGHVDATLIVYCIVSQGSSLNH*NSAIGT Trigger: TGTCCCGATGGCTGAATTCCAGTGGTTCAAAGAAGA...ACCTTGGCTCACAATGCAGTACACAATAAGAGTTGCATCTACATGTCCTATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR TCA 90 bp | AAGCAGCACATCACCCAACACTTTTCAGTTTCCATGGCATCCACATTTCCTTTTGAGGGTAGTTTACAGTaGTTTTTACTTTCCGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: KQHITQHFSVSMASTFPFEGSLQ*FLLSEH Trigger: ATGTTCGGAAAGTAAAAATCACTGTAAACTACCCTC...AAAAGGAAATGTGGATGCCATGGAAACTGAAAAGTGTTGGGTGATGTGCTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCACATCACCCAACACTTTTCAGTTTCCATGGCATCCACATTTCCTTTTTATACATCCACATTCTaGATCATGATACTGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQHITQHFSVSMASTFPFYTSTF*IMILYW Trigger: CCAATACAGTATCATGATCCAGAATGTGGATGTATA...AAAAGGAAATGTGGATGCCATGGAAACTGAAAAGTGTTGGGTGATGTGCTGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CAA 72 bp | TATATCTGGTACTCAGTTGCCTTTAGTCATTTCTACTaGGCTTTTGATTTTTCTCCCAGACAGAGGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: YIWYSVAFSHFY*AFDFSPRQRRI Trigger: AATCCTCCTCTGTCTGGGAGAAAAATCAAAAGCCAAGTAGAAATGACTAAAGGCAACTGAGTACCAGATATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| 3UTR CAA 72 bp | AGAAATGAGGGAAATGAGCTTGGCATTTTTATTTGTTaGCCTTCTGTGTGGTCATTAGAAGCTCTAATCATA | + |
|
Preference number: 4 (lower is better) Translates to: RNEGNELGIFIC*PSVWSLEALII Trigger: TATGATTAGAGCTTCTAATGACCACACAGAAGGCAAACAAATAAAAATGCCAAGCTCATTTCCCTCATTTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS CCA 90 bp | AGTGGGCAAAGAAGGTCCCTGAGAGCCAGAGACAAGCCAGTGCTCTaGAGGCCGAGTTTACACCATCAATCACTGCTCCAGGCCCATACA | + |
|
Preference number: 5 (lower is better) Translates to: SGQRRSLRARDKPVL*RPSLHHQSLLQAHT Trigger: TGTATGGGCCTGGAGCAGTGATTGATGGTGTAAACTCGGCCTCCAGAGCACTGGCTTGTCTCTGGCTCTCAGGGACCTTCTTTGCCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CAA 90 bp | AGCATAATCAAGGCTTTCCCAGGGCTGACCTGCCTCCTGAGAAGGTGGCTTAGGGCCTCCATGTCACCGTaGGTTCTGGTCTGCCAATTG | + |
|
Preference number: 5 (lower is better) Translates to: SIIKAFPGLTCLLRRWLRASMSP*VLVCQL Trigger: CAATTGGCAGACCAGAACCAACGGTGACATGGAGGC...CCTAAGCCACCTTCTCAGGAGGCAGGTCAGCCCTGGGAAAGCCTTGATTATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS CCA 90 bp | ACCCCATCCAGGCCAGTGGCTAACCTGGTATCTTCTTTGAACCACTaGAATTCAGCCATCGGGACAGCAGAGGCTTCGCAGCTCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: TPSRPVANLVSSLNH*NSAIGTAEASQLKM Trigger: CATCTTGAGCTGCGAAGCCTCTGCTGTCCCGATGGCTGAATTCCAGTGGTTCAAAGAAGATACCAGGTTAGCCACTGGCCTGGATGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS TCA 90 bp | CGGGACAGCAGAGGCTTCGCAGCTCAAGATGCCCTTCTGACCCACTaGAACACCAGTGTTCTTGGCTTTAGATATATAGGGAGGGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RDSRGFAAQDALLTH*NTSVLGFRYIGRVV Trigger: AACTACCCTCCCTATATATCTAAAGCCAAGAACACTGGTGTTTCAGTGGGTCAGAAGGGCATCTTGAGCTGCGAAGCCTCTGCTGTCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS GCA 90 bp | AGGTATTCATCTTCACTCACAAATCCCTGGCCCTTGACTGACAGGTaGCTCCATGTCACCGTTGGTTCTGGTCTGCCAATTGCAAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: RYSSSLTNPWPLTDR*LHVTVGSGLPIARH Trigger: ATGTCTTGCAATTGGCAGACCAGAACCAACGGTGACATGGAGGCACCTGTCAGTCAAGGGCCAGGGATTTGTGAGTGAAGATGAATACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR CAA 90 bp | GAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATACCAATTATCTGGGGAGGAACTaGCACTATGAGATGGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: EKRKTKVAGIDSVWGHTNYLGRN*HYEMDP Trigger: CGGGTCCATCTCATAGTGCAAGTTCCTCCCCAGATA...ATTGGTATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CAA 90 bp | GAAGTAGAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATGTGGATATGCGGCCTTaGTTCTCAATTCTCACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EVEKRKTKVAGIDSVWGHVDMRP*FSILTP Trigger: TGGGGTGAGAATTGAGAACAAAGGCCGCATATCCAC...ATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTCTACTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CAA 90 bp | AAGCCCAAACTGGTTTGCCCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAGTGGATATGCGGCCTTaGTTCTCAATTCTCACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KPKLVCPPQCRLKSVIWRVDMRP*FSILTP Trigger: TGGGGTGAGAATTGAGAACAAAGGCCGCATATCCAC...TCTCCATATCACAGACTTTAATCTACACTGCGGAGGGCAAACCAGTTTGGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAATGGTGGTAAGAAGATTGGTGTTCCCAAGCTaGTTTGTGGCCACACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RVCVCVCVCVCVLMVVRRLVFPS*FVATQV Trigger: TACCTGTGTGGCCACAAACAAGCTTGGGAACACCAA...TCTTCTTACCACCATTAACACACACACACACACACACACACACACACACACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CAA 90 bp | GAAGTAGAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATGTTCTGGTCTGCCAATaGCAAGACATAACAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EVEKRKTKVAGIDSVWGHVLVCQ*QDITGS Trigger: TGACCCTGTTATGTCTTGCAATTGGCAGACCAGAAC...ATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTCTACTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CAA 90 bp | TCTAATTCCAACAAGAGTAGCTCTGGAGGGGAAAAGGGTATTCTGGGTATTGTCTTGGTGTTCCCAAGCTaGTTTGTGGCCACACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SNSNKSSSGGEKGILGIVLVFPS*FVATQV Trigger: TACCTGTGTGGCCACAAACAAGCTTGGGAACACCAA...GACAATACCCAGAATACCCTTTTCCCCTCCAGAGCTACTCTTGTTGGAATTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS CCA 90 bp | GGACCTTCATCGTATACATCCACATTCTGGATCATGATACTGTATTaGGTAGGCGTGTTGACCAAAATGATCACTCGAGGGTCTATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GPSSYTSTFWIMILY*VGVLTKMITRGSMD Trigger: GTCCATAGACCCTCGAGTGATCATTTTGGTCAACACGCCTACCCAATACAGTATCATGATCCAGAATGTGGATGTATACGATGAAGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAATGGTGGTAAGAAGATATTGGGTAGGCGTGTaGACCAAAATGATCACTCGA | + |
|
Preference number: 5 (lower is better) Translates to: RVCVCVCVCVCVLMVVRRYWVGV*TKMITR Trigger: TCGAGTGATCATTTTGGTCAACACGCCTACCCAATA...TCTTCTTACCACCATTAACACACACACACACACACACACACACACACACACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CAA 90 bp | AAAATAGGACATGTAGATGCAACTCTTATTGTGTACTGCATTGTGAGCCAAGGTGCCTCCATGTCACCGTaGGTTCTGGTCTGCCAATTG | + |
|
Preference number: 5 (lower is better) Translates to: KIGHVDATLIVYCIVSQGASMSP*VLVCQL Trigger: CAATTGGCAGACCAGAACCAACGGTGACATGGAGGC...ACCTTGGCTCACAATGCAGTACACAATAAGAGTTGCATCTACATGTCCTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CAA 90 bp | GAAGTAGAGAAAAGGAAGACCAAGGTAGCAGGAATAGATTCCGTTTGGGGGCATAACCTGGTATCTTCTTaGAACCACTGGAATTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EVEKRKTKVAGIDSVWGHNLVSS*NHWNSA Trigger: GGCTGAATTCCAGTGGTTCAAAGAAGATACCAGGTT...ATGCCCCCAAACGGAATCTATTCCTGCTACCTTGGTCTTCCTTTTCTCTACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CAA 90 bp | AAGCCCAAACTGGTTTGCCCTCCGCAGTGTAGATTAAAGTCTGTGATATGGAGAAACCTGGTATCTTCTTaGAACCACTGGAATTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KPKLVCPPQCRLKSVIWRNLVSS*NHWNSA Trigger: GGCTGAATTCCAGTGGTTCAAAGAAGATACCAGGTT...TCTCCATATCACAGACTTTAATCTACACTGCGGAGGGCAAACCAGTTTGGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
||
| CDS-3UTR CAA 90 bp | AATGGGTACACCCATTGTCCAACACATCTATTAACGGCACCATTGATAATCTTAACAAATCCCTGGCCCTaGACTGACAGGTGCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NGYTHCPTHLLTAPLIILTNPWP*TDRCLH Trigger: ATGGAGGCACCTGTCAGTCAAGGGCCAGGGATTTGT...TAAGATTATCAATGGTGCCGTTAATAGATGTGTTGGACAATGGGTGTACCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCACATCACCCAACACTTTTCAGTTTCCATGGCATCCACATTTCCTTTTGTTCTGGTCTGCCAATaGCAAGACATAACAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KQHITQHFSVSMASTFPFVLVCQ*QDITGS Trigger: TGACCCTGTTATGTCTTGCAATTGGCAGACCAGAAC...AAAAGGAAATGTGGATGCCATGGAAACTGAAAAGTGTTGGGTGATGTGCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
||
| CDS-3UTR CAA 90 bp | AGCTCTCAATCTTTCCTTCTCCACCTAGTGGTGTGGAACAACCATGTGCCTAAATCCTTCTCTGAGACATaGAAGAAAGTCAAAGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: SSQSFLLHLVVWNNHVPKSFSET*KKVKVD Trigger: ATCCACTTTGACTTTCTTCAATGTCTCAGAGAAGGA...TTTAGGCACATGGTTGTTCCACACCACTAGGTGGAGAAGGAAAGATTGAGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| CDS-3UTR CAA 90 bp | AAAATAGGACATGTAGATGCAACTCTTATTGTGTACTGCATTGTGAGCCAAGGTTATTGGGTAGGCGTGTaGACCAAAATGATCACTCGA | + |
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Preference number: 5 (lower is better) Translates to: KIGHVDATLIVYCIVSQGYWVGV*TKMITR Trigger: TCGAGTGATCATTTTGGTCAACACGCCTACCCAATA...ACCTTGGCTCACAATGCAGTACACAATAAGAGTTGCATCTACATGTCCTATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| CDS-3UTR CAA 90 bp | TGTAGCGTTGGGTACATATATAGTCTCAATTCTGTAAGTCTTACAGCTAGTGGCTCCTTCTCTGAGACATaGAAGAAAGTCAAAGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: CSVGYIYSLNSVSLTASGSFSET*KKVKVD Trigger: ATCCACTTTGACTTTCTTCAATGTCTCAGAGAAGGA...GCCACTAGCTGTAAGACTTACAGAATTGAGACTATATATGTACCCAACGCTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| CDS GCA 72 bp | CAGTGCTCTGGAGGCCGAGTTTACACCATCAATCACTaGTCCAGGCCCATACAGGGTGATGCTGGCATTGGT | + |
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Preference number: 6 (lower is better) Translates to: QCSGGRVYTINH*SRPIQGDAGIG Trigger: ACCAATGCCAGCATCACCCTGTATGGGCCTGGAGCAGTGATTGATGGTGTAAACTCGGCCTCCAGAGCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| CDS CCA 72 bp | AGGCCAGTGGCTAACCTGGTATCTTCTTTGAACCACTaGAATTCAGCCATCGGGACAGCAGAGGCTTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: RPVANLVSSLNH*NSAIGTAEASQ Trigger: CTGCGAAGCCTCTGCTGTCCCGATGGCTGAATTCCAGTGGTTCAAAGAAGATACCAGGTTAGCCACTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| CDS CAA 72 bp | ACCCCATCCAGGCCAGTGGCTAACCTGGTATCTTCTTaGAACCACTGGAATTCAGCCATCGGGACAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: TPSRPVANLVSS*NHWNSAIGTAE Trigger: CTCTGCTGTCCCGATGGCTGAATTCCAGTGGTTCAAAGAAGATACCAGGTTAGCCACTGGCCTGGATGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| CDS TCA 72 bp | GGGACAGCAGAGGCTTCGCAGCTCAAGATGCCCTTCTaGCCCACTGAAACACCAGTGTTCTTGGCTTTAGAT | + |
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Preference number: 6 (lower is better) Translates to: GTAEASQLKMPF*PTETPVFLALD Trigger: ATCTAAAGCCAAGAACACTGGTGTTTCAGTGGGTCAGAAGGGCATCTTGAGCTGCGAAGCCTCTGCTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| CDS GCA 72 bp | CTGACAGGTGCCTCCATGTCACCGTTGGTTCTGGTCTaGCAATTGCAAGACATAACAGGGTCACACTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LTGASMSPLVLV*QLQDITGSHCF Trigger: GAAGCAGTGTGACCCTGTTATGTCTTGCAATTGGCAGACCAGAACCAACGGTGACATGGAGGCACCTGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| CDS GCA 72 bp | TCTTCACTCACAAATCCCTGGCCCTTGACTGACAGGTaGCTCCATGTCACCGTTGGTTCTGGTCTGCCAATT | + |
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Preference number: 6 (lower is better) Translates to: SSLTNPWPLTDR*LHVTVGSGLPI Trigger: AATTGGCAGACCAGAACCAACGGTGACATGGAGGCACCTGTCAGTCAAGGGCCAGGGATTTGTGAGTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| CDS TCA 72 bp | GTATTCATCTTCACTCACAAATCCCTGGCCCTTGACTaGCAGGTGCCTCCATGTCACCGTTGGTTCTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: VFIFTHKSLALD*QVPPCHRWFWS Trigger: AGACCAGAACCAACGGTGACATGGAGGCACCTGTCAGTCAAGGGCCAGGGATTTGTGAGTGAAGATGAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115243.9 |
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| CDS TCA 72 bp | CAGGGTCACACTGCTTCCTTCATTCACGGTAATGTCTaGCGAGATGTTCATTATCTGGGGAGGAACTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: QGHTASFIHGNV*RDVHYLGRNLH Trigger: GTGCAAGTTCCTCCCCAGATAATGAACATCTCGTCAGACATTACCGTGAATGAAGGAAGCAGTGTGACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| CDS CAA 72 bp | GAGACATTGAAGAAAGTCAAAGTGGATATGCGGCCTTaGTTCTCAATTCTCACCCCATCCAGGCCAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: ETLKKVKVDMRP*FSILTPSRPVA Trigger: AGCCACTGGCCTGGATGGGGTGAGAATTGAGAACAAAGGCCGCATATCCACTTTGACTTTCTTCAATGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| CDS CAA 90 bp | TCCTTCTCTGAGACATTGAAGAAAGTCAAAGTGGATATGCGGCCTTaGTTCTCAATTCTCACCCCATCCAGGCCAGTGGCTAACCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: SFSETLKKVKVDMRP*FSILTPSRPVANLV Trigger: TACCAGGTTAGCCACTGGCCTGGATGGGGTGAGAATTGAGAACAAAGGCCGCATATCCACTTTGACTTTCTTCAATGTCTCAGAGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| CDS CCA 72 bp | CAGGTGTATGGACCTTCATCGTATACATCCACATTCTaGATCATGATACTGTATTGGGTAGGCGTGTTGACC | + |
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Preference number: 6 (lower is better) Translates to: QVYGPSSYTSTF*IMILYWVGVLT Trigger: GGTCAACACGCCTACCCAATACAGTATCATGATCCAGAATGTGGATGTATACGATGAAGGTCCATACACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| CDS CAA 72 bp | ACATTCTGGATCATGATACTGTATTGGGTAGGCGTGTaGACCAAAATGATCACTCGAGGGTCTATGGACCAC | + |
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Preference number: 6 (lower is better) Translates to: TFWIMILYWVGV*TKMITRGSMDH Trigger: GTGGTCCATAGACCCTCGAGTGATCATTTTGGTCAACACGCCTACCCAATACAGTATCATGATCCAGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| CDS CAA 90 bp | TGGACCTTCATCGTATACATCCACATTCTGGATCATGATACTGTATaGGGTAGGCGTGTTGACCAAAATGATCACTCGAGGGTCTATGGA | + |
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Preference number: 6 (lower is better) Translates to: WTFIVYIHILDHDTV*GRRVDQNDHSRVYG Trigger: TCCATAGACCCTCGAGTGATCATTTTGGTCAACACGCCTACCCAATACAGTATCATGATCCAGAATGTGGATGTATACGATGAAGGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| CDS CCA 72 bp | TCGTATACATCCACATTCTGGATCATGATACTGTATTaGGTAGGCGTGTTGACCAAAATGATCACTCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: SYTSTFWIMILY*VGVLTKMITRG Trigger: CCCTCGAGTGATCATTTTGGTCAACACGCCTACCCAATACAGTATCATGATCCAGAATGTGGATGTATACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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| CDS CAA 72 bp | ATCGTATACATCCACATTCTGGATCATGATACTGTATaGGGTAGGCGTGTTGACCAAAATGATCACTCGAGG | + |
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Preference number: 6 (lower is better) Translates to: IVYIHILDHDTV*GRRVDQNDHSR Trigger: CCTCGAGTGATCATTTTGGTCAACACGCCTACCCAATACAGTATCATGATCCAGAATGTGGATGTATACGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073822.6 ENSMUST00000115243.9 |
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