Pregenerated sensors for OPA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052214Ensembl transcript IDs: ENSMUST00000063976.9, ENSMUST00000161711.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGATGGAGCTCAGCGCCCTCACCGGTCTTGGCTTTGCCATAACTaGTATAGACTGACCCAGGGCAAGGTGGCCAGGGCTGGCCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: PDGAQRPHRSWLCHN*YRLTQGKVARAGPG Trigger: TCCAGGGCCAGCCCTGGCCACCTTGCCCTGGGTCAGTCTATAGCAGTTATGGCAAAGCCAAGACCGGTGAGGGCGCTGAGCTCCATCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR CCA 90 bp | GGCCTCCTGCCCCAGAGGCTTCTGGAACCACACACCACACCACGGTaGCTTCCTGCACTGTCATCATGGGAGAGGCTGCCATGTCCACAT | + |
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Preference number: 1 (lower is better) Translates to: GLLPQRLLEPHTTPR*LPALSSWERLPCPH Trigger: ATGTGGACATGGCAGCCTCTCCCATGATGACAGTGCAGGAAGCCACCGTGGTGTGGTGTGTGGTTCCAGAAGCCTCTGGGGCAGGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR GCA 90 bp | CCAGTGCCTCTGGCCACTGGGAAGAGGTTGGGCCTTATCTCATCTTaGCCTGCAGCCAGAATCTTCTGGGTCCTCTGGTCCCTCCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: PVPLATGKRLGLISS*PAARIFWVLWSLLS Trigger: GCTCAGGAGGGACCAGAGGACCCAGAAGATTCTGGCTGCAGGGCAAGATGAGATAAGGCCCAACCTCTTCCCAGTGGCCAGAGGCACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR CCA 90 bp | GACACAGAGTCTAGGAGATCTGGGGCCCCTGAAGCCAGAAGAAAGTaGGGCCCAAACACCCTGACCTCTGCCGCTGGCTTCCAGAACGGT | + |
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Preference number: 1 (lower is better) Translates to: DTESRRSGAPEARRK*GPNTLTSAAGFQNG Trigger: ACCGTTCTGGAAGCCAGCGGCAGAGGTCAGGGTGTTTGGGCCCCACTTTCTTCTGGCTTCAGGGGCCCCAGATCTCCTAGACTCTGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR TCA 90 bp | TCCAATGAGGGGCTGAGGGCTCTGAGTCAGAGACTGGATGGGCTCTaGAGGCTTCTGCTGAGTGCTCCCTGGGGAAATGCCCAGAACCTG | + |
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Preference number: 1 (lower is better) Translates to: SNEGLRALSQRLDGL*RLLLSAPWGNAQNL Trigger: CAGGTTCTGGGCATTTCCCCAGGGAGCACTCAGCAGAAGCCTTCAGAGCCCATCCAGTCTCTGACTCAGAGCCCTCAGCCCCTCATTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR TCA 90 bp | TCCACTGGGTCAGGGTGGGCCCCGAGGCCTACTTTCATGCTTGGGTaGCCCAAAGGTGACATTTCCTCTTGGTGCCTGTTTCCTCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: STGSGWAPRPTFMLG*PKGDISSWCLFPPK Trigger: CTTGGGAGGAAACAGGCACCAAGAGGAAATGTCACCTTTGGGTCACCCAAGCATGAAAGTAGGCCTCGGGGCCCACCCTGACCCAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR TCA 90 bp | GGTAGATGGAGGGAGATGGGGCTCCAGAACCTAAGGCAGGGAGTATaGTGGGCCAGTAAGGTTGTTAGACGGCTCCCCAACACACTGCCC | + |
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Preference number: 1 (lower is better) Translates to: GRWREMGLQNLRQGV*WASKVVRRLPNTLP Trigger: GGGCAGTGTGTTGGGGAGCCGTCTAACAACCTTACTGGCCCATCATACTCCCTGCCTTAGGTTCTGGAGCCCCATCTCCCTCCATCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| 3UTR GCA 90 bp | GTGAAGGCTCCACTGGGTCAGGGTGGGCCCCGAGGCCTACTTTCATaGTTGGGTGACCCAAAGGTGACATTTCCTCTTGGTGCCTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: VKAPLGQGGPRGLLS*LGDPKVTFPLGACF Trigger: GAAACAGGCACCAAGAGGAAATGTCACCTTTGGGTCACCCAAGCATGAAAGTAGGCCTCGGGGCCCACCCTGACCCAGTGGAGCCTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR GCA 90 bp | ACACCACACCACGGTGGCTTCCTGCACTGTCATCATGGGAGAGGCTaGCATGTCCACATACACCAGGACCATGTGAAGGCTCCACTGGGT | + |
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Preference number: 1 (lower is better) Translates to: TPHHGGFLHCHHGRG*HVHIHQDHVKAPLG Trigger: ACCCAGTGGAGCCTTCACATGGTCCTGGTGTATGTGGACATGGCAGCCTCTCCCATGATGACAGTGCAGGAAGCCACCGTGGTGTGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR TCA 90 bp | GCCAGAGCAGTGGAGAGTCAGGTGTCTGAGACCTTGAAAGTCCAATaGGGGGCTGAGGGCTCTGAGTCAGAGACTGGATGGGCTCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: ARAVESQVSETLKVQ*GAEGSESETGWALK Trigger: CTTCAGAGCCCATCCAGTCTCTGACTCAGAGCCCTCAGCCCCTCATTGGACTTTCAAGGTCTCAGACACCTGACTCTCCACTGCTCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR TCA 90 bp | CATCTTGCCCTGCAGCCAGAATCTTCTGGGTCCTCTGGTCCCTCCTaGGCTATGGGGTCTTGGCCAAGTCACCTAGCTTCCCTTTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: HLALQPESSGSSGPS*AMGSWPSHLASLFL Trigger: CAGGAAAAGGGAAGCTAGGTGACTTGGCCAAGACCCCATAGCTCAGGAGGGACCAGAGGACCCAGAAGATTCTGGCTGCAGGGCAAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR CCA 90 bp | GGCCTTATCTCATCTTGCCCTGCAGCCAGAATCTTCTGGGTCCTCTaGTCCCTCCTGAGCTATGGGGTCTTGGCCAAGTCACCTAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: GLISSCPAARIFWVL*SLLSYGVLAKSPSF Trigger: GAAGCTAGGTGACTTGGCCAAGACCCCATAGCTCAGGAGGGACCAGAGGACCCAGAAGATTCTGGCTGCAGGGCAAGATGAGATAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR TCA 90 bp | GAACATCAATTGCACTCTGCTGCCTCCATGGGAGCTACATTGACCTaGGGCAAGGCTCAAGGTGGCCTGTGTTCACCGAAGGAAGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: EHQLHSAASMGATLT*GKAQGGLCSPKEGG Trigger: GCCTCCTTCCTTCGGTGAACACAGGCCACCTTGAGCCTTGCCTCAGGTCAATGTAGCTCCCATGGAGGCAGCAGAGTGCAATTGATGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR TCA 90 bp | AGGGTGGGCCCCGAGGCCTACTTTCATGCTTGGGTGACCCAAAGGTaGCATTTCCTCTTGGTGCCTGTTTCCTCCCAAGCAAGCAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: RVGPEAYFHAWVTQR*HFLLVPVSSQASRE Trigger: TTCTCTGCTTGCTTGGGAGGAAACAGGCACCAAGAGGAAATGTCACCTTTGGGTCACCCAAGCATGAAAGTAGGCCTCGGGGCCCACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR CCA 90 bp | AAGAGGTTGGGCCTTATCTCATCTTGCCCTGCAGCCAGAATCTTCTaGGTCCTCTGGTCCCTCCTGAGCTATGGGGTCTTGGCCAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: KRLGLISSCPAARIF*VLWSLLSYGVLAKS Trigger: TGACTTGGCCAAGACCCCATAGCTCAGGAGGGACCAGAGGACCCAGAAGATTCTGGCTGCAGGGCAAGATGAGATAAGGCCCAACCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR CCA 90 bp | CTTAGTGACTCCACAGGGGTAACCATGGCAAACAGGCAGCTTTCCTaGCTCCTCACTCTGTCCTCCCCTCATCACCTAGCCATGTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: LSDSTGVTMANRQLS*LLTLSSPHHLAMCV Trigger: GACACACATGGCTAGGTGATGAGGGGAGGACAGAGTGAGGAGCCAGGAAAGCTGCCTGTTTGCCATGGTTACCCCTGTGGAGTCACTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR TCA 90 bp | CTTTTGCCTTTGCCAGAGCAGTGGAGAGTCAGGTGTCTGAGACCTTaGAAGTCCAATGAGGGGCTGAGGGCTCTGAGTCAGAGACTGGAT | + |
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Preference number: 1 (lower is better) Translates to: LLPLPEQWRVRCLRP*KSNEGLRALSQRLD Trigger: ATCCAGTCTCTGACTCAGAGCCCTCAGCCCCTCATTGGACTTTCAAGGTCTCAGACACCTGACTCTCCACTGCTCTGGCAAAGGCAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR CCA 90 bp | GCCAGGGAGAATGAACCTGTTACCTATAGTCAGACATCTTGGGTGTaGCCTGGGGCTTTTCTGATAAGAGGGCAGAACCCAGTGCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: ARENEPVTYSQTSWV*PGAFLIRGQNPVPL Trigger: CAGAGGCACTGGGTTCTGCCCTCTTATCAGAAAAGCCCCAGGCCACACCCAAGATGTCTGACTATAGGTAACAGGTTCATTCTCCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR CCA 90 bp | TCTTGGTGCCTGTTTCCTCCCAAGCAAGCAGAGAAACCATTCCTATaGGGCTCTTCACCACCAGTGAGGCTGGTCTGTTGGAGTAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: SWCLFPPKQAEKPFL*GSSPPVRLVCWSKD Trigger: GTCCTTACTCCAACAGACCAGCCTCACTGGTGGTGAAGAGCCCCATAGGAATGGTTTCTCTGCTTGCTTGGGAGGAAACAGGCACCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR CCA 90 bp | ACACTGCCCTCCTTTCCAAGTACAGCATTCAAGCAATGGTGGTTTTaGTTAGGGGAGCTGGAAGGGTTCCTGTCATGTCCCACCAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: TLPSFPSTAFKQWWF*LGELEGFLSCPTSG Trigger: CCCACTGGTGGGACATGACAGGAACCCTTCCAGCTCCCCTAACCAAAACCACCATTGCTTGAATGCTGTACTTGGAAAGGAGGGCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| 3UTR CCA 90 bp | CCCAACACACTGCCCTCCTTTCCAAGTACAGCATTCAAGCAATGGTaGTTTTGGTTAGGGGAGCTGGAAGGGTTCCTGTCATGTCCCACC | + |
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Preference number: 1 (lower is better) Translates to: PNTLPSFPSTAFKQW*FWLGELEGFLSCPT Trigger: GGTGGGACATGACAGGAACCCTTCCAGCTCCCCTAACCAAAACCACCATTGCTTGAATGCTGTACTTGGAAAGGAGGGCAGTGTGTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| 3UTR TCA 90 bp | ATTTATTGTCCTCCTTCTCCCTTTGTGGGGATATGTAACATTGCATaGGTAGGGAGTCAGAGCCATGAAAGCTGCTCTGGCCTCCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: IYCPPSPFVGICNIA*VGSQSHESCSGLLP Trigger: GGGCAGGAGGCCAGAGCAGCTTTCATGGCTCTGACTCCCTACTCATGCAATGTTACATATCCCCACAAAGGGAGAAGGAGGACAATAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR GCA 90 bp | ACCCACCCAACTGAAAAATACCACAGAAGGACAGGAGGAAATATGTaGCACCCGAAACAAGGTTCAGGGACATTTCAGGATAGGGCAGCG | + |
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Preference number: 1 (lower is better) Translates to: THPTEKYHRRTGGNM*HPKQGSGTFQDRAA Trigger: CGCTGCCCTATCCTGAAATGTCCCTGAACCTTGTTTCGGGTGGCACATATTTCCTCCTGTCCTTCTGTGGTATTTTTCAGTTGGGTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR CCA 90 bp | AGATGTAATAAAGGCTCTTTCAATATGGTCATCCTAAATTTAGGGTaGGTCTTGTATTCAGGGCAGGTGTCCTTGCAAGAGACAGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: RCNKGSFNMVILNLG*VLYSGQVSLQETGG Trigger: CCCACCTGTCTCTTGCAAGGACACCTGCCCTGAATACAAGACCCACCCTAAATTTAGGATGACCATATTGAAAGAGCCTTTATTACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR CCA 90 bp | AAAGAGTGGGTAAGGGAGTTATTTGGTTTTCTGGAATGTCCCATTTaGACAGAAGGTGAGGCTGCTGTTCGCCATATTTTAAGTGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: KEWVRELFGFLECPI*TEGEAAVRHILSGF Trigger: AAAGCCACTTAAAATATGGCGAACAGCAGCCTCACCTTCTGTCCAAATGGGACATTCCAGAAAACCAAATAACTCCCTTACCCACTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| 3UTR TCA 90 bp | CTCCTAAATTTAAAGACACCAACTTCAGCTTCTTCTAGAAGAAACTaGGGTACAGTTTCAGTATTGGTTTCAGTCTGGGGAATCCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: LLNLKTPTSASSRRN*GTVSVLVSVWGILG Trigger: CCCCAGGATTCCCCAGACTGAAACCAATACTGAAACTGTACCTCAGTTTCTTCTAGAAGAAGCTGAAGTTGGTGTCTTTAAATTTAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR CAA 90 bp | GGACCCATCTGTCCCCAGAGACCAGGGCACGTTAGCTGGCACCATTaGGGGGTGGGCCCATGCAGAGAGGTCAGTCATGTGACAAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: GPICPQRPGHVSWHH*GVGPCREVSHVTSP Trigger: TGGGCTTGTCACATGACTGACCTCTCTGCATGGGCCCACCCCCAAATGGTGCCAGCTAACGTGCCCTGGTCTCTGGGGACAGATGGGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| 3UTR CAA 90 bp | CCCAGTGCCTCTGGCCACTGGGAAGAGGTTGGGCCTTATCTCATCTaGCCCTGCAGCCAGAATCTTCTGGGTCCTCTGGTCCCTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: PSASGHWEEVGPYLI*PCSQNLLGPLVPPE Trigger: CTCAGGAGGGACCAGAGGACCCAGAAGATTCTGGCTGCAGGGCAAGATGAGATAAGGCCCAACCTCTTCCCAGTGGCCAGAGGCACTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR-3UTR TCA 90 bp | CCCAAACACCCTGACCTCTGCCGCTGGCTTCCAGAACGGTGGGAGAACAGGTTACCGGGCCAGGAGGTGTaGGGAGAAGGCTCTATTGGA | + |
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Preference number: 2 (lower is better) Translates to: PKHPDLCRWLPERWENRLPGQEV*GEGSIG Trigger: TCCAATAGAGCCTTCTCCTCACACCTCCTGGCCCGG...TAACCTGTTCTCCCACCGTTCTGGAAGCCAGCGGCAGAGGTCAGGGTGTTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR-3UTR CCA 90 bp | CCCAAACACCCTGACCTCTGCCGCTGGCTTCCAGAACGGTGGGAGAACAGGTTACTGCTGAGTGCTCCCTaGGGAAATGCCCAGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: PKHPDLCRWLPERWENRLLLSAP*GNAQNL Trigger: CAGGTTCTGGGCATTTCCCCAGGGAGCACTCAGCAG...TAACCTGTTCTCCCACCGTTCTGGAAGCCAGCGGCAGAGGTCAGGGTGTTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR CAA 90 bp | AAGGCTCCACTGGGTCAGGGTGGGCCCCGAGGCCTACTTTCATGCTaGGGTGACCCAAAGGTGACATTTCCTCTTGGTGCCTGTTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: KAPLGQGGPRGLLSC*GDPKVTFPLGACFL Trigger: GAGGAAACAGGCACCAAGAGGAAATGTCACCTTTGGGTCACCCAAGCATGAAAGTAGGCCTCGGGGCCCACCCTGACCCAGTGGAGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGGTGTGGCCTGGGGCTTTTCTGATAAGAGGGCAGAACCCAGTGCCTCTGGCACCTTGAAAGTCCAATaGGGGGCTGAGGGCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LGVAWGFSDKRAEPSASGTLKVQ*GAEGSE Trigger: CTCAGAGCCCTCAGCCCCTCATTGGACTTTCAAGGT...GCCAGAGGCACTGGGTTCTGCCCTCTTATCAGAAAAGCCCCAGGCCACACCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGGTGTGGCCTGGGGCTTTTCTGATAAGAGGGCAGAACCCAGTGCCTCTGGCACCTCAGAGGGAGAATaGGGAGAGAGAACGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: LGVAWGFSDKRAEPSASGTSEGE*GERTGT Trigger: TGTTCCCGTTCTCTCTCCTCATTCTCCCTCTGAGGT...GCCAGAGGCACTGGGTTCTGCCCTCTTATCAGAAAAGCCCCAGGCCACACCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR-3UTR GCA 90 bp | GATCCTGAGAATACCGTGAAACAAACAGGTGGGTGGTGGCACTGGCCCACATGGTTGGGGGTGGGCCCATaGAGAGAGGTCAGTCATGTG | + |
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Preference number: 2 (lower is better) Translates to: DPENTVKQTGGWWHWPTWLGVGP*REVSHV Trigger: CACATGACTGACCTCTCTGCATGGGCCCACCCCCAA...CCATGTGGGCCAGTGCCACCACCCACCTGTTTGTTTCACGGTATTCTCAGGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAAACACCCTGACCTCTGCCGCTGGCTTCCAGAACGGTGGGAGAACAGGTTAAACGGGAACATCAATTaGACTCTGCTGCCTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: PKHPDLCRWLPERWENRLNGNIN*TLLPPW Trigger: CCATGGAGGCAGCAGAGTGCAATTGATGTTCCCGTT...TAACCTGTTCTCCCACCGTTCTGGAAGCCAGCGGCAGAGGTCAGGGTGTTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR-3UTR CCA 90 bp | CCCAAACACCCTGACCTCTGCCGCTGGCTTCCAGAACGGTGGGAGAACAGGTTAATCGAGCAAGGAAGGTaGGGCAACAGAAAGGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: PKHPDLCRWLPERWENRLIEQGR*GNRKGR Trigger: TCTACCCTTTCTGTTGCCCCACCTTCCTTGCTCGAT...TAACCTGTTCTCCCACCGTTCTGGAAGCCAGCGGCAGAGGTCAGGGTGTTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTGGAACCACACACCACACCACGGTGGCTTCCTGCACTGTCATCATGGGACCACTGGGAAGAGGTTaGGCCTTATCTCATCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: ASGTTHHTTVASCTVIMGPLGRG*ALSHLA Trigger: GGCAAGATGAGATAAGGCCCAACCTCTTCCCAGTGG...TCCCATGATGACAGTGCAGGAAGCCACCGTGGTGTGGTGTGTGGTTCCAGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCTTCTGGAACCACACACCACACCACGGTGGCTTCCTGCACTGTCATCATGGCGCCCTCACCGGTCTTaGCTTTGCCATAACTGCTAT | + |
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Preference number: 2 (lower is better) Translates to: RLLEPHTTPRWLPALSSWRPHRS*LCHNCY Trigger: ATAGCAGTTATGGCAAAGCCAAGACCGGTGAGGGCG...CCATGATGACAGTGCAGGAAGCCACCGTGGTGTGGTGTGTGGTTCCAGAAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR-3UTR TCA 90 bp | GCTTCTGGAACCACACACCACACCACGGTGGCTTCCTGCACTGTCATCATGGGAAGACAGGTGTGTGTGTaGCATCTAACCCACCCAACT | + |
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Preference number: 2 (lower is better) Translates to: ASGTTHHTTVASCTVIMGRQVCV*HLTHPT Trigger: AGTTGGGTGGGTTAGATGTCACACACACACCTGTCT...TCCCATGATGACAGTGCAGGAAGCCACCGTGGTGTGGTGTGTGGTTCCAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCTTCTGGAACCACACACCACACCACGGTGGCTTCCTGCACTGTCATCATGGCTTGCAAGAGACAGGTaGGGGAAGAGAAAGCCACAT | + |
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Preference number: 2 (lower is better) Translates to: RLLEPHTTPRWLPALSSWLARDR*GKRKPH Trigger: ATGTGGCTTTCTCTTCCCCCACCTGTCTCTTGCAAG...CCATGATGACAGTGCAGGAAGCCACCGTGGTGTGGTGTGTGGTTCCAGAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTGGAACCACACACCACACCACGGTGGCTTCCTGCACTGTCATCATGGGAGGTGACATTTCCTCTTaGTGCCTGTTTCCTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: ASGTTHHTTVASCTVIMGGDISS*CLFPPK Trigger: CTTGGGAGGAAACAGGCACCAAGAGGAAATGTCACC...TCCCATGATGACAGTGCAGGAAGCCACCGTGGTGTGGTGTGTGGTTCCAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR CAA 90 bp | CACACTGCCCTCCTTTCCAAGTACAGCATTCAAGCAATGGTGGTTTaGGTTAGGGGAGCTGGAAGGGTTCCTGTCATGTCCCACCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: HTALLSKYSIQAMVV*VRGAGRVPVMSHQW Trigger: CCACTGGTGGGACATGACAGGAACCCTTCCAGCTCCCCTAACCAAAACCACCATTGCTTGAATGCTGTACTTGGAAAGGAGGGCAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGGTTACTCTGTTTCCTCCATCACATTCCCAGCAGTAAGTCATGTCTGGGGGAAGGAGGCGCTCCAATaGTGGGCAGGTGACCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: TGYSVSSITFPAVSHVWGKEALQ*WAGDLV Trigger: GACAAGGTCACCTGCCCATCATTGGAGCGCCTCCTT...CCCCCAGACATGACTTACTGCTGGGAATGTGATGGAGGAAACAGAGTAACCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR-3UTR GCA 90 bp | GTGCCTGTTTCCTCCCAAGCAAGCAGAGAAACCATTCCTATGGGGCTCTTCACCCGATCAGAATCCACCTaGCTCTGCTTCCCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: VPVSSQASRETIPMGLFTRSEST*LCFPSA Trigger: AGCACTTGGGAAGCAGAGGCAGGTGGATTCTGATCG...GGTGAAGAGCCCCATAGGAATGGTTTCTCTGCTTGCTTGGGAGGAAACAGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTGGAACCACACACCACACCACGGTGGCTTCCTGCACTGTCATCATGGGACACCGGTCTTGGCTTTaGCATAACTGCTATAGACTG | + |
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Preference number: 2 (lower is better) Translates to: ASGTTHHTTVASCTVIMGHRSWL*HNCYRL Trigger: CAGTCTATAGCAGTTATGGCAAAGCCAAGACCGGTG...TCCCATGATGACAGTGCAGGAAGCCACCGTGGTGTGGTGTGTGGTTCCAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR-3UTR CCA 90 bp | TCACCTAGCCATGTGTGTCCTCTGTCCCTAGTTCAGCTTTCACCTAACTCAGCTACAGGCGTGATCCCCTaGGGACCTCAGAGGGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: SPSHVCPLSLVQLSPNSATGVIP*GPQREN Trigger: ATTCTCCCTCTGAGGTCCCCAGGGGATCACGCCTGT...AGCTGAGTTAGGTGAAAGCTGAACTAGGGACAGAGGACACACATGGCTAGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| 3UTR-3UTR CCA 90 bp | CCACCTCTAGGGACAAGGGCCAGGGAGAATGAACCTGTTACCTATAGTCAGACAGAAGCCAGAAGAAAGTaGGGCCCAAACACCCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: PPLGTRARENEPVTYSQTEARRK*GPNTLT Trigger: GGTCAGGGTGTTTGGGCCCCACTTTCTTCTGGCTTC...TGTCTGACTATAGGTAACAGGTTCATTCTCCCTGGCCCTTGTCCCTAGAGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR CCA 90 bp | ACTGAGGTACAGTTTCAGTATTGGTTTCAGTCTGGGGAATCCTGGGGATGGGTCGCAGCCAGAATCTTCTaGGTCCTCTGGTCCCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: TEVQFQYWFQSGESWGWVAARIF*VLWSLL Trigger: CAGGAGGGACCAGAGGACCCAGAAGATTCTGGCTGC...GACCCATCCCCAGGATTCCCCAGACTGAAACCAATACTGAAACTGTACCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTTCCAGAACGGTGGGAGAACAGGTTACTCTGTTTCCTCCATCACATTCCCTGCTCCCTGGGGAAATaGCCAGAACCTGTCAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: WLPERWENRLLCFLHHIPCSLGK*PEPVSK Trigger: CTTACTGACAGGTTCTGGGCATTTCCCCAGGGAGCA...GGGAATGTGATGGAGGAAACAGAGTAACCTGTTCTCCCACCGTTCTGGAAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR GCA 90 bp | AAACCATTCCTATGGGGCTCTTCACCACCAGTGAGGCTGGTCTGTTGGAGTAAGGAATCCACCTGCCTCTaGTTCCCAAGTGCTGGGATT | + |
|
Preference number: 2 (lower is better) Translates to: KPFLWGSSPPVRLVCWSKESTCL*FPSAGI Trigger: AATCCCAGCACTTGGGAAGCAGAGGCAGGTGGATTC...CTTACTCCAACAGACCAGCCTCACTGGTGGTGAAGAGCCCCATAGGAATGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR CCA 90 bp | CCACCTCTAGGGACAAGGGCCAGGGAGAATGAACCTGTTACCTATAGTCAGACAACATCAAGGTCCTCGTaGTTTCTGCTAGGCCAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PPLGTRARENEPVTYSQTTSRSS*FLLGQS Trigger: GCTCTGGCCTAGCAGAAACCACGAGGACCTTGATGT...TGTCTGACTATAGGTAACAGGTTCATTCTCCCTGGCCCTTGTCCCTAGAGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR CCA 90 bp | AAACCATTCCTATGGGGCTCTTCACCACCAGTGAGGCTGGTCTGTTGGAGTAAGCCTTTGCCAGAGCAGTaGAGAGTCAGGTGTCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KPFLWGSSPPVRLVCWSKPLPEQ*RVRCLR Trigger: TCTCAGACACCTGACTCTCCACTGCTCTGGCAAAGG...CTTACTCCAACAGACCAGCCTCACTGGTGGTGAAGAGCCCCATAGGAATGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR CCA 90 bp | TCACCTAGCCATGTGTGTCCTCTGTCCCTAGTTCAGCTTTCACCTAACTCAGCTATCTTCTGGGTCCTCTaGTCCCTCCTGAGCTATGGG | + |
|
Preference number: 2 (lower is better) Translates to: SPSHVCPLSLVQLSPNSAIFWVL*SLLSYG Trigger: CCCATAGCTCAGGAGGGACCAGAGGACCCAGAAGAT...AGCTGAGTTAGGTGAAAGCTGAACTAGGGACAGAGGACACACATGGCTAGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGAACAGGTTACTCTGTTTCCTCCATCACATTCCCAGCAGTAAGTCATGTCTCTGAAGGCTTCTGCTaGGTGCTCCCTGGGGAAATG | + |
|
Preference number: 2 (lower is better) Translates to: GRTGYSVSSITFPAVSHVSEGFC*VLPGEM Trigger: CATTTCCCCAGGGAGCACTCAGCAGAAGCCTTCAGA...GACATGACTTACTGCTGGGAATGTGATGGAGGAAACAGAGTAACCTGTTCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR TCA 90 bp | TCACCTAGCCATGTGTGTCCTCTGTCCCTAGTTCAGCTTTCACCTAACTCAGCTAGGTGTCTGAGACCTTaGAAGTCCAATGAGGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SPSHVCPLSLVQLSPNSARCLRP*KSNEGL Trigger: CAGCCCCTCATTGGACTTTCAAGGTCTCAGACACCT...AGCTGAGTTAGGTGAAAGCTGAACTAGGGACAGAGGACACACATGGCTAGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR CCA 90 bp | CCACCTCTAGGGACAAGGGCCAGGGAGAATGAACCTGTTACCTATAGTCAGACATCCATGTCTGAATCCTaGGGCCTGTGTGTCTCCATT | + |
|
Preference number: 2 (lower is better) Translates to: PPLGTRARENEPVTYSQTSMSES*GLCVSI Trigger: AATGGAGACACACAGGCCCCAGGATTCAGACATGGA...TGTCTGACTATAGGTAACAGGTTCATTCTCCCTGGCCCTTGTCCCTAGAGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR TCA 90 bp | TCACCTAGCCATGTGTGTCCTCTGTCCCTAGTTCAGCTTTCACCTAACTCAGCTGGAGAGTCAGGTGTCTaGGACCTTGAAAGTCCAATG | + |
|
Preference number: 2 (lower is better) Translates to: SPSHVCPLSLVQLSPNSAGESGV*DLESPM Trigger: CATTGGACTTTCAAGGTCTCAGACACCTGACTCTCC...AGCTGAGTTAGGTGAAAGCTGAACTAGGGACAGAGGACACACATGGCTAGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR GCA 90 bp | TCACCTAGCCATGTGTGTCCTCTGTCCCTAGTTCAGCTTTCACCTAACTCAGCTCAGAGCCAAAACCTCTaGCTTTCCTCCAAGGTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: SPSHVCPLSLVQLSPNSAQSQNL*LSSKVV Trigger: GACAACCTTGGAGGAAAGGCAGAGGTTTTGGCTCTG...AGCTGAGTTAGGTGAAAGCTGAACTAGGGACAGAGGACACACATGGCTAGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAGGTACAGTTTCAGTATTGGTTTCAGTCTGGGGAATCCTGGGGATGGGTCTCAATTGCACTCTGCTaGCTCCATGGGAGCTACATT | + |
|
Preference number: 2 (lower is better) Translates to: TEVQFQYWFQSGESWGWVSIALC*LHGSYI Trigger: AATGTAGCTCCCATGGAGGCAGCAGAGTGCAATTGA...GACCCATCCCCAGGATTCCCCAGACTGAAACCAATACTGAAACTGTACCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR CCA 90 bp | CCACCTCTAGGGACAAGGGCCAGGGAGAATGAACCTGTTACCTATAGTCAGACAATCAGACTTGAGCCCTaGTTCCATCTTTTGCCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: PPLGTRARENEPVTYSQTIRLEP*FHLLPL Trigger: CAAAGGCAAAAGATGGAACCAGGGCTCAAGTCTGAT...TGTCTGACTATAGGTAACAGGTTCATTCTCCCTGGCCCTTGTCCCTAGAGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGAGAACAGGTTACTCTGTTTCCTCCATCACATTCCCAGCAGTAAGTCATGTCTCCATCTTTTGCCTTTaGCAGAGCAGTGGAGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: GRTGYSVSSITFPAVSHVSIFCL*QSSGES Trigger: TGACTCTCCACTGCTCTGGCAAAGGCAAAAGATGGA...GACATGACTTACTGCTGGGAATGTGATGGAGGAAACAGAGTAACCTGTTCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTCAGCTTCTTCTAGAAGAAACTGAGGTACAGTTTCAGTATTGGTTTCAGTCTGAGGGCAGAACCCAGTaGCTCTGGCCACTGGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LQLLLEETEVQFQYWFQSEGRTQ*LWPLGR Trigger: TCTTCCCAGTGGCCAGAGGCACTGGGTTCTGCCCTC...AGACTGAAACCAATACTGAAACTGTACCTCAGTTTCTTCTAGAAGAAGCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR TCA 90 bp | CACCAACTTCAGCTTCTTCTAGAAGAAACTGAGGTACAGTTTCAGTATTGGTTTGGAGCTACATTGACCTaGGGCAAGGCTCAAGGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: HQLQLLLEETEVQFQYWFGATLT*GKAQGG Trigger: GCCACCTTGAGCCTTGCCTCAGGTCAATGTAGCTCC...AAACCAATACTGAAACTGTACCTCAGTTTCTTCTAGAAGAAGCTGAAGTTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR CCA 90 bp | TCACCTAGCCATGTGTGTCCTCTGTCCCTAGTTCAGCTTTCACCTAACTCAGCTATCCTAAATTTAGGGTaGGTCTTGTATTCAGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SPSHVCPLSLVQLSPNSAILNLG*VLYSGQ Trigger: CTGCCCTGAATACAAGACCCACCCTAAATTTAGGAT...AGCTGAGTTAGGTGAAAGCTGAACTAGGGACAGAGGACACACATGGCTAGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR TCA 90 bp | TCACCTAGCCATGTGTGTCCTCTGTCCCTAGTTCAGCTTTCACCTAACTCAGCTTCTTCTAGAAGAAACTaGGGTACAGTTTCAGTATTG | + |
|
Preference number: 2 (lower is better) Translates to: SPSHVCPLSLVQLSPNSASSRRN*GTVSVL Trigger: CAATACTGAAACTGTACCTCAGTTTCTTCTAGAAGA...AGCTGAGTTAGGTGAAAGCTGAACTAGGGACAGAGGACACACATGGCTAGGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGTTATTTGGTTTTCTGGAATGTCCCATTTGGACAGAAGGTGAGGCTGCTGTCGCCATATTTTAAGTaGCTTTTTACCCGGAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: GSYLVFWNVPFGQKVRLLSPYFK*LFTRKI Trigger: GATCTTCCGGGTAAAAAGCCACTTAAAATATGGCGA...CAGCAGCCTCACCTTCTGTCCAAATGGGACATTCCAGAAAACCAAATAACTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| 3UTR-3UTR TCA 90 bp | CACCAACTTCAGCTTCTTCTAGAAGAAACTGAGGTACAGTTTCAGTATTGGTTTCAGAAGGCAGCAAGCTaGATAGAGGGCCTTCAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: HQLQLLLEETEVQFQYWFQKAAS*IEGLQK Trigger: CTTTTGAAGGCCCTCTATTCAGCTTGCTGCCTTCTG...AAACCAATACTGAAACTGTACCTCAGTTTCTTCTAGAAGAAGCTGAAGTTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR GCA 90 bp | CACCAACTTCAGCTTCTTCTAGAAGAAACTGAGGTACAGTTTCAGTATTGGTTTCCTGGTTCCATCTTTTaGCTTTGCCAGAGCAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: HQLQLLLEETEVQFQYWFPGSIF*LCQSSG Trigger: TCCACTGCTCTGGCAAAGGCAAAAGATGGAACCAGG...AAACCAATACTGAAACTGTACCTCAGTTTCTTCTAGAAGAAGCTGAAGTTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR TCA 72 bp | GGAGAGGCTGCCATGTCCACATACACCAGGACCATGTaGAGGCTCCACTGGGTCAGGGTGGGCCCCGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GEAAMSTYTRTM*RLHWVRVGPEA Trigger: GGCCTCGGGGCCCACCCTGACCCAGTGGAGCCTTCACATGGTCCTGGTGTATGTGGACATGGCAGCCTCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CCA 72 bp | GGACCCATCTGTCCCCAGAGACCAGGGCACGTTAGCTaGCACCATTTGGGGGTGGGCCCATGCAGAGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GPICPQRPGHVS*HHLGVGPCREV Trigger: GACCTCTCTGCATGGGCCCACCCCCAAATGGTGCCAGCTAACGTGCCCTGGTCTCTGGGGACAGATGGGTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| 3UTR TCA 72 bp | GGGCTGAGGGCTCTGAGTCAGAGACTGGATGGGCTCTaGAGGCTTCTGCTGAGTGCTCCCTGGGGAAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: GLRALSQRLDGL*RLLLSAPWGNA Trigger: GGCATTTCCCCAGGGAGCACTCAGCAGAAGCCTTCAGAGCCCATCCAGTCTCTGACTCAGAGCCCTCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CCA 72 bp | CCCCAGAGGCTTCTGGAACCACACACCACACCACGGTaGCTTCCTGCACTGTCATCATGGGAGAGGCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PQRLLEPHTTPR*LPALSSWERLP Trigger: TGGCAGCCTCTCCCATGATGACAGTGCAGGAAGCCACCGTGGTGTGGTGTGTGGTTCCAGAAGCCTCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR TCA 72 bp | CTCACCGGTCTTGGCTTTGCCATAACTGCTATAGACTaGCCCAGGGCAAGGTGGCCAGGGCTGGCCCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LTGLGFAITAID*PRARWPGLALE Trigger: TTCCAGGGCCAGCCCTGGCCACCTTGCCCTGGGTCAGTCTATAGCAGTTATGGCAAAGCCAAGACCGGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR TCA 72 bp | TTTCTGCTAGGCCAGAGCATCCCGGGCCAGGAGGTGTaGGGAGAAGGCTCTATTGGAGGCCACATGGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: FLLGQSIPGQEV*GEGSIGGHMVT Trigger: TGTGACCATGTGGCCTCCAATAGAGCCTTCTCCTCACACCTCCTGGCCCGGGATGCTCTGGCCTAGCAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR GCA 72 bp | CTGGCCACTGGGAAGAGGTTGGGCCTTATCTCATCTTaGCCTGCAGCCAGAATCTTCTGGGTCCTCTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LATGKRLGLISS*PAARIFWVLWS Trigger: GGACCAGAGGACCCAGAAGATTCTGGCTGCAGGGCAAGATGAGATAAGGCCCAACCTCTTCCCAGTGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR GCA 72 bp | CCTGATGGAGCTCAGCGCCCTCACCGGTCTTGGCTTTaGCATAACTGCTATAGACTGACCCAGGGCAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PDGAQRPHRSWL*HNCYRLTQGKV Trigger: CACCTTGCCCTGGGTCAGTCTATAGCAGTTATGGCAAAGCCAAGACCGGTGAGGGCGCTGAGCTCCATCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR GCA 72 bp | CCACTGGGTCAGGGTGGGCCCCGAGGCCTACTTTCATaGTTGGGTGACCCAAAGGTGACATTTCCTCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PLGQGGPRGLLS*LGDPKVTFPLG Trigger: ACCAAGAGGAAATGTCACCTTTGGGTCACCCAAGCATGAAAGTAGGCCTCGGGGCCCACCCTGACCCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR GCA 72 bp | GCTTCTGGAACCACACACCACACCACGGTGGCTTCCTaGACTGTCATCATGGGAGAGGCTGCCATGTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: ASGTTHHTTVAS*TVIMGEAAMST Trigger: TGTGGACATGGCAGCCTCTCCCATGATGACAGTGCAGGAAGCCACCGTGGTGTGGTGTGTGGTTCCAGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCCAGAATCTTCTGGGTCCTCTGGTCCCTCCTGAGCTATGGGGTCTTGGCCAACCCTGGTTCCATCTTTaGCCTTTGCCAGAGCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SQNLLGPLVPPELWGLGQPWFHL*PLPEQW Trigger: CCACTGCTCTGGCAAAGGCAAAAGATGGAACCAGGG...TTGGCCAAGACCCCATAGCTCAGGAGGGACCAGAGGACCCAGAAGATTCTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR TCA 72 bp | TTGCACTCTGCTGCCTCCATGGGAGCTACATTGACCTaGGGCAAGGCTCAAGGTGGCCTGTGTTCACCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LHSAASMGATLT*GKAQGGLCSPK Trigger: CTTCGGTGAACACAGGCCACCTTGAGCCTTGCCTCAGGTCAATGTAGCTCCCATGGAGGCAGCAGAGTGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR TCA 72 bp | AGGGAGATGGGGCTCCAGAACCTAAGGCAGGGAGTATaGTGGGCCAGTAAGGTTGTTAGACGGCTCCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: REMGLQNLRQGV*WASKVVRRLPN Trigger: GTTGGGGAGCCGTCTAACAACCTTACTGGCCCATCATACTCCCTGCCTTAGGTTCTGGAGCCCCATCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| 3UTR GCA 72 bp | CACTGGGAAGAGGTTGGGCCTTATCTCATCTTGCCCTaGAGCCAGAATCTTCTGGGTCCTCTGGTCCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HWEEVGPYLILP*SQNLLGPLVPP Trigger: AGGAGGGACCAGAGGACCCAGAAGATTCTGGCTGCAGGGCAAGATGAGATAAGGCCCAACCTCTTCCCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR GCA 72 bp | CACGGTGGCTTCCTGCACTGTCATCATGGGAGAGGCTaGCATGTCCACATACACCAGGACCATGTGAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: HGGFLHCHHGRG*HVHIHQDHVKA Trigger: AGCCTTCACATGGTCCTGGTGTATGTGGACATGGCAGCCTCTCCCATGATGACAGTGCAGGAAGCCACCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CCA 72 bp | CTGAGGAGTAAGGGGATCTATACAGGCGTGATCCCCTaGGGACCTCAGAGGGAGAATGAGGAGAGAGAACGG | + |
|
Preference number: 3 (lower is better) Translates to: LRSKGIYTGVIP*GPQRENEERER Trigger: CCGTTCTCTCTCCTCATTCTCCCTCTGAGGTCCCCAGGGGATCACGCCTGTATAGATCCCCTTACTCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CCA 72 bp | AAGAAAGTGGGGCCCAAACACCCTGACCTCTGCCGCTaGCTTCCAGAACGGTGGGAGAACAGGTTACTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KKVGPKHPDLCR*LPERWENRLLC Trigger: ACAGAGTAACCTGTTCTCCCACCGTTCTGGAAGCCAGCGGCAGAGGTCAGGGTGTTTGGGCCCCACTTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CCA 72 bp | TCATCTTGCCCTGCAGCCAGAATCTTCTGGGTCCTCTaGTCCCTCCTGAGCTATGGGGTCTTGGCCAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSCPAARIFWVL*SLLSYGVLAKS Trigger: TGACTTGGCCAAGACCCCATAGCTCAGGAGGGACCAGAGGACCCAGAAGATTCTGGCTGCAGGGCAAGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CCA 72 bp | GGCCTTATCTCATCTTGCCCTGCAGCCAGAATCTTCTaGGTCCTCTGGTCCCTCCTGAGCTATGGGGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GLISSCPAARIF*VLWSLLSYGVL Trigger: CAAGACCCCATAGCTCAGGAGGGACCAGAGGACCCAGAAGATTCTGGCTGCAGGGCAAGATGAGATAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR CAA 90 bp | CCACCTCTAGGGACAAGGGCCAGGGAGAATGAACCTGTTACCTATAGTCAGACATCAGGGCAGGTGTCCTaGCAAGAGACAGGTGGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PPLGTRARENEPVTYSQTSGQVS*QETGGG Trigger: TCCCCCACCTGTCTCTTGCAAGGACACCTGCCCTGA...TGTCTGACTATAGGTAACAGGTTCATTCTCCCTGGCCCTTGTCCCTAGAGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTTCTGGAACCACACACCACACCACGGTGGCTTCCTGCACTGTCATCATGGGGGCCTTATCTCATCTaGCCCTGCAGCCAGAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: RLLEPHTTPRWLPALSSWGPYLI*PCSQNL Trigger: AAGATTCTGGCTGCAGGGCAAGATGAGATAAGGCCC...CCATGATGACAGTGCAGGAAGCCACCGTGGTGTGGTGTGTGGTTCCAGAAGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR TCA 72 bp | GTGGAGAGTCAGGTGTCTGAGACCTTGAAAGTCCAATaGGGGGCTGAGGGCTCTGAGTCAGAGACTGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: VESQVSETLKVQ*GAEGSESETGW Trigger: CCATCCAGTCTCTGACTCAGAGCCCTCAGCCCCTCATTGGACTTTCAAGGTCTCAGACACCTGACTCTCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR TCA 72 bp | TTGCCAGAGCAGTGGAGAGTCAGGTGTCTGAGACCTTaGAAGTCCAATGAGGGGCTGAGGGCTCTGAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LPEQWRVRCLRP*KSNEGLRALSQ Trigger: CTGACTCAGAGCCCTCAGCCCCTCATTGGACTTTCAAGGTCTCAGACACCTGACTCTCCACTGCTCTGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR TCA 72 bp | TACAGGCGTGATCCCCTGGGGACCTCAGAGGGAGAATaGGGAGAGAGAACGGGAACATCAATTGCACTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: YRRDPLGTSEGE*GERTGTSIALC Trigger: GCAGAGTGCAATTGATGTTCCCGTTCTCTCTCCTCATTCTCCCTCTGAGGTCCCCAGGGGATCACGCCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR TCA 72 bp | TCAGGGTGGGCCCCGAGGCCTACTTTCATGCTTGGGTaGCCCAAAGGTGACATTTCCTCTTGGTGCCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SGWAPRPTFMLG*PKGDISSWCLF Trigger: AAACAGGCACCAAGAGGAAATGTCACCTTTGGGTCACCCAAGCATGAAAGTAGGCCTCGGGGCCCACCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR TCA 72 bp | ATCAATTGCACTCTGCTGCCTCCATGGGAGCTACATTaGCCTGAGGCAAGGCTCAAGGTGGCCTGTGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: INCTLLPPWELH*PEARLKVACVH Trigger: GTGAACACAGGCCACCTTGAGCCTTGCCTCAGGTCAATGTAGCTCCCATGGAGGCAGCAGAGTGCAATTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CCA 72 bp | CTGTTTCCTCCCAAGCAAGCAGAGAAACCATTCCTATaGGGCTCTTCACCACCAGTGAGGCTGGTCTGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LFPPKQAEKPFL*GSSPPVRLVCW Trigger: CCAACAGACCAGCCTCACTGGTGGTGAAGAGCCCCATAGGAATGGTTTCTCTGCTTGCTTGGGAGGAAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR TCA 72 bp | CAGAGAAACCATTCCTATGGGGCTCTTCACCACCAGTaGGGCTGGTCTGTTGGAGTAAGGACTGACCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: QRNHSYGALHHQ*GWSVGVRTDLM Trigger: CATCAGGTCAGTCCTTACTCCAACAGACCAGCCTCACTGGTGGTGAAGAGCCCCATAGGAATGGTTTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR GCA 72 bp | GGGCCAGTAAGGTTGTTAGACGGCTCCCCAACACACTaGCCTCCTTTCCAAGTACAGCATTCAAGCAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: GPVRLLDGSPTH*PPFQVQHSSNG Trigger: ACCATTGCTTGAATGCTGTACTTGGAAAGGAGGGCAGTGTGTTGGGGAGCCGTCTAACAACCTTACTGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| 3UTR CCA 72 bp | GTTTCCTCCATCACATTCCCAGCAGTAAGTCATGTCTaGGGGGATCGAGCAAGGAAGGTGGGGCAACAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSSITFPAVSHV*GDRARKVGQQK Trigger: TTTCTGTTGCCCCACCTTCCTTGCTCGATCCCCCCAGACATGACTTACTGCTGGGAATGTGATGGAGGAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CCA 72 bp | AAACACCCTGACCTCTGCCGCTGGCTTCCAGAACGGTaGGAGAACAGGTTACTCTGTTTCCTCCATCACATT | + |
|
Preference number: 3 (lower is better) Translates to: KHPDLCRWLPER*ENRLLCFLHHI Trigger: AATGTGATGGAGGAAACAGAGTAACCTGTTCTCCCACCGTTCTGGAAGCCAGCGGCAGAGGTCAGGGTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTCCAGAACGGTGGGAGAACAGGTTACTCTGTTTCCTCCATCACATTCCCGAGGAGAAGGCTCTATaGGAGGCCACATGGTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: WLPERWENRLLCFLHHIPEEKAL*EATWSQ Trigger: TTGTGACCATGTGGCCTCCAATAGAGCCTTCTCCTC...GGGAATGTGATGGAGGAAACAGAGTAACCTGTTCTCCCACCGTTCTGGAAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR GCA 72 bp | CAGCTCCATCAGGAACTGGACAACCATGACAGTGACTaGTGCACCCACAATCCTTCTGGAGCTATAGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: QLHQELDNHDSD*CTHNPSGAIVV Trigger: AACCACTATAGCTCCAGAAGGATTGTGGGTGCAGCAGTCACTGTCATGGTTGTCCAGTTCCTGATGGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CCA 72 bp | CTGCCCTCCTTTCCAAGTACAGCATTCAAGCAATGGTaGTTTTGGTTAGGGGAGCTGGAAGGGTTCCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPSFPSTAFKQW*FWLGELEGFLS Trigger: TGACAGGAACCCTTCCAGCTCCCCTAACCAAAACCACCATTGCTTGAATGCTGTACTTGGAAAGGAGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| 3UTR CCA 72 bp | GGTGACCTTGTCTATGTCATGATCAGACTTGAGCCCTaGTTCCATCTTTTGCCTTTGCCAGAGCAGTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GDLVYVMIRLEP*FHLLPLPEQWR Trigger: TCTCCACTGCTCTGGCAAAGGCAAAAGATGGAACCAGGGCTCAAGTCTGATCATGACATAGACAAGGTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CCA 72 bp | AGGGAGAATGAACCTGTTACCTATAGTCAGACATCTTaGGTGTGGCCTGGGGCTTTTCTGATAAGAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RENEPVTYSQTS*VWPGAFLIRGQ Trigger: CTGCCCTCTTATCAGAAAAGCCCCAGGCCACACCCAAGATGTCTGACTATAGGTAACAGGTTCATTCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CCA 72 bp | TCCTTTCCAAGTACAGCATTCAAGCAATGGTGGTTTTaGTTAGGGGAGCTGGAAGGGTTCCTGTCATGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SFPSTAFKQWWF*LGELEGFLSCP Trigger: GGGACATGACAGGAACCCTTCCAGCTCCCCTAACCAAAACCACCATTGCTTGAATGCTGTACTTGGAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| 3UTR CCA 72 bp | AATGAACCTGTTACCTATAGTCAGACATCTTGGGTGTaGCCTGGGGCTTTTCTGATAAGAGGGCAGAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: NEPVTYSQTSWV*PGAFLIRGQNP Trigger: TGGGTTCTGCCCTCTTATCAGAAAAGCCCCAGGCCACACCCAAGATGTCTGACTATAGGTAACAGGTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR TCA 72 bp | CAGACAGGTGTGTGTGTGACATCTAACCCACCCAACTaGAAAATACCACAGAAGGACAGGAGGAAATATGTG | + |
|
Preference number: 3 (lower is better) Translates to: QTGVCVTSNPPN*KIPQKDRRKYV Trigger: CACATATTTCCTCCTGTCCTTCTGTGGTATTTTTCAGTTGGGTGGGTTAGATGTCACACACACACCTGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR GCA 72 bp | ACTGAAAAATACCACAGAAGGACAGGAGGAAATATGTaGCACCCGAAACAAGGTTCAGGGACATTTCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: TEKYHRRTGGNM*HPKQGSGTFQD Trigger: ATCCTGAAATGTCCCTGAACCTTGTTTCGGGTGGCACATATTTCCTCCTGTCCTTCTGTGGTATTTTTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CCA 72 bp | AAAGGCTCTTTCAATATGGTCATCCTAAATTTAGGGTaGGTCTTGTATTCAGGGCAGGTGTCCTTGCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KGSFNMVILNLG*VLYSGQVSLQE Trigger: CTCTTGCAAGGACACCTGCCCTGAATACAAGACCCACCCTAAATTTAGGATGACCATATTGAAAGAGCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CCA 72 bp | GTAAGGGAGTTATTTGGTTTTCTGGAATGTCCCATTTaGACAGAAGGTGAGGCTGCTGTTCGCCATATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: VRELFGFLECPI*TEGEAAVRHIL Trigger: TAAAATATGGCGAACAGCAGCCTCACCTTCTGTCCAAATGGGACATTCCAGAAAACCAAATAACTCCCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| 3UTR CCA 72 bp | CATTTTAAATTCATAAACCACTCCTTCGTGGCCCAGTaGGTTAGCAAAGAGTGGGTAAGGGAGTTATTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: HFKFINHSFVAQ*VSKEWVRELFG Trigger: ACCAAATAACTCCCTTACCCACTCTTTGCTAACCCACTGGGCCACGAAGGAGTGGTTTATGAATTTAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| 3UTR TCA 72 bp | ATTTGGTTTTCTGGAATGTCCCATTTGGACAGAAGGTaGGGCTGCTGTTCGCCATATTTTAAGTGGCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: IWFSGMSHLDRR*GCCSPYFKWLF Trigger: AAAAAGCCACTTAAAATATGGCGAACAGCAGCCTCACCTTCTGTCCAAATGGGACATTCCAGAAAACCAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| 3UTR TCA 72 bp | TTAAAGACACCAACTTCAGCTTCTTCTAGAAGAAACTaGGGTACAGTTTCAGTATTGGTTTCAGTCTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LKTPTSASSRRN*GTVSVLVSVWG Trigger: TCCCCAGACTGAAACCAATACTGAAACTGTACCTCAGTTTCTTCTAGAAGAAGCTGAAGTTGGTGTCTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| CDS-3UTR GCA 90 bp | GGTGATCCTGAGAATACCGTGAAACAAACAGGTGGGTGGTGGCACTGGCCCACACTCCGCCCGCAGCTCTaGCCGCAGCTCTGCCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDPENTVKQTGGWWHWPTLRPQL*PQLCPQ Trigger: CTGCGGGCAGAGCTGCGGGCAGAGCTGCGGGCGGAG...TGTGGGCCAGTGCCACCACCCACCTGTTTGTTTCACGGTATTCTCAGGATCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGTGTGGCCTGGGGCTTTTCTGATAAGAGGGCAGAACCCAGTGCCTCTGGCCGCATCTCCACCCAGTaGTACAGCTGGGCTGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGVAWGFSDKRAEPSASGRISTQ*YSWAGG Trigger: ACCGCCAGCCCAGCTGTACCACTGGGTGGAGATGCG...GCCAGAGGCACTGGGTTCTGCCCTCTTATCAGAAAAGCCCCAGGCCACACCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTAGGACCCATCTGTCCCCAGAGACCAGGGCACGTTAGCTGGCACCATTTGAGCCAGTGGTACAGCTaGGCTGGCGGTAGGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLGPICPQRPGHVSWHHLSQWYS*AGGRQM Trigger: CATCTGCCTACCGCCAGCCCAGCTGTACCACTGGCT...CAAATGGTGCCAGCTAACGTGCCCTGGTCTCTGGGGACAGATGGGTCCTAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| 3UTR CAA 72 bp | CTGGGTCAGGGTGGGCCCCGAGGCCTACTTTCATGCTaGGGTGACCCAAAGGTGACATTTCCTCTTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGQGGPRGLLSC*GDPKVTFPLGA Trigger: GGCACCAAGAGGAAATGTCACCTTTGGGTCACCCAAGCATGAAAGTAGGCCTCGGGGCCCACCCTGACCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGGAACCACACACCACACCACGGTGGCTTCCTGCACTGTCATCATGGGACAGAGCGTTCCAGGCTaGCCGCTGTTCCTCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASGTTHHTTVASCTVIMGQSVPG*PLFLLL Trigger: AAGGAGGAGGAACAGCGGGCAGCCTGGAACGCTCTG...TCCCATGATGACAGTGCAGGAAGCCACCGTGGTGTGGTGTGTGGTTCCAGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| CDS-3UTR CCA 90 bp | AGAGACCAGGGCACGTTAGCTGGCACCATTTGGGGGTGGGCCCATGCAGAGAGGTGTTTCGATGACTTCTaGCGCCAGAACTCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RDQGTLAGTIWGWAHAERCFDDF*RQNSSS Trigger: GCTGCTGGAGTTCTGGCGCCAGAAGTCATCGAAACA...CCTCTCTGCATGGGCCCACCCCCAAATGGTGCCAGCTAACGTGCCCTGGTCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| CDS-3UTR CCA 90 bp | GATCCTGAGAATACCGTGAAACAAACAGGTGGGTGGTGGCACTGGCCCACATGGAGAACAGCTTCGCCATaGGGAACGCGCCCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: DPENTVKQTGGWWHWPTWRTASP*GTRPPP Trigger: TGGTGGTGGGCGCGTTCCCCATGGCGAAGCTGTTCT...CCATGTGGGCCAGTGCCACCACCCACCTGTTTGTTTCACGGTATTCTCAGGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| 3UTR CAA 72 bp | GCATCCCGGGCCAGGAGGTGTGAGGAGAAGGCTCTATaGGAGGCCACATGGTCACAAACAAGTCCAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASRARRCEEKAL*EATWSQTSPGL Trigger: AAGGCCTGGACTTGTTTGTGACCATGTGGCCTCCAATAGAGCCTTCTCCTCACACCTCCTGGCCCGGGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| CDS-3UTR GCA 90 bp | GCCCTCCTTTCCAAGTACAGCATTCAAGCAATGGTGGTTTTGGTTAGGGGAGCTAGCACCGTGGCCACCTaGGCCACTTCCCTGCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLSKYSIQAMVVLVRGASTVAT*ATSLRC Trigger: ACACCGCAGGGAAGTGGCGCAGGTGGCCACGGTGCT...AGCTCCCCTAACCAAAACCACCATTGCTTGAATGCTGTACTTGGAAAGGAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCTGTTTCCTCCCAAGCAAGCAGAGAAACCATTCCTATGGGGCTCTTCACCAGAACAGCTTCGCCATaGGGAACGCGCCCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VPVSSQASRETIPMGLFTRTASP*GTRPPP Trigger: TGGTGGTGGGCGCGTTCCCCATGGCGAAGCTGTTCT...GGTGAAGAGCCCCATAGGAATGGTTTCTCTGCTTGCTTGGGAGGAAACAGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CAA 72 bp | TTCTGGGTCCTCTGGTCCCTCCTGAGCTATGGGGTCTaGGCCAAGTCACCTAGCTTCCCTTTTCCTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FWVLWSLLSYGV*AKSPSFPFPEP Trigger: AGGCTCAGGAAAAGGGAAGCTAGGTGACTTGGCCAAGACCCCATAGCTCAGGAGGGACCAGAGGACCCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| CDS-3UTR TCA 90 bp | GGTGATCCTGAGAATACCGTGAAACAAACAGGTGGGTGGTGGCACTGGCCCACACCTCATTCAGTGGCTTaGTGGCCTCAGCATGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GDPENTVKQTGGWWHWPTPHSVA*WPQHGS Trigger: GCTTCCATGCTGAGGCCATCAAGCCACTGAATGAGG...TGTGGGCCAGTGCCACCACCCACCTGTTTGTTTCACGGTATTCTCAGGATCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| CDS-3UTR TCA 90 bp | TTCATAAACCACTCCTTCGTGGCCCAGTGGGTTAGCAAAGAGTGGGTAAGGGAGCCGCAGCTCATCCAGTaGGTTCCTGGGCAATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FINHSFVAQWVSKEWVREPQLIQ*VPGQCC Trigger: GCAGCATTGCCCAGGAACTCACTGGATGAGCTGCGG...CTCCCTTACCCACTCTTTGCTAACCCACTGGGCCACGAAGGAGTGGTTTATGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| CDS-3UTR TCA 90 bp | GTCCCCAGAGACCAGGGCACGTTAGCTGGCACCATTTGGGGGTGGGCCCATGCATACAGATCTGGGTTCTaGACTTCTGTAGCTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VPRDQGTLAGTIWGWAHAYRSGF*TSVAHL Trigger: AAGATGAGCTACAGAAGTTCAGAACCCAGATCTGTA...TGCATGGGCCCACCCCCAAATGGTGCCAGCTAACGTGCCCTGGTCTCTGGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| CDS-3UTR GCA 90 bp | GATCCTGAGAATACCGTGAAACAAACAGGTGGGTGGTGGCACTGGCCCACATGGCCTGCGCCACTTCCCTaGGGTGTTTCGATGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DPENTVKQTGGWWHWPTWPAPLP*GVSMTS Trigger: AGAAGTCATCGAAACACCGCAGGGAAGTGGCGCAGG...CCATGTGGGCCAGTGCCACCACCCACCTGTTTGTTTCACGGTATTCTCAGGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| CDS-3UTR TCA 90 bp | AAACCATTCCTATGGGGCTCTTCACCACCAGTGAGGCTGGTCTGTTGGAGTAAGTCCTTATTGCGCTGCTaGGTCTGGTGGCGCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KPFLWGSSPPVRLVCWSKSLLRC*VWWRQY Trigger: GTACTGGCGCCACCAGACTCAGCAGCGCAATAAGGA...CTTACTCCAACAGACCAGCCTCACTGGTGGTGAAGAGCCCCATAGGAATGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| CDS-3UTR GCA 90 bp | GCCCTCCTTTCCAAGTACAGCATTCAAGCAATGGTGGTTTTGGTTAGGGGAGCTGTTCCTGGGCAATGCTaGCTGCACCTGCACCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALLSKYSIQAMVVLVRGAVPGQC*LHLHLH Trigger: GTGCAGGTGCAGGTGCAGGCAGCATTGCCCAGGAAC...AGCTCCCCTAACCAAAACCACCATTGCTTGAATGCTGTACTTGGAAAGGAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| CDS-3UTR TCA 90 bp | GCCCTCCTTTCCAAGTACAGCATTCAAGCAATGGTGGTTTTGGTTAGGGGAGCTCAGCATGGAAGCCCATaGTGCGCATCTTGGTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLSKYSIQAMVVLVRGAQHGSP*CASWSA Trigger: TGCGGACCAAGATGCGCATCATGGGCTTCCATGCTG...AGCTCCCCTAACCAAAACCACCATTGCTTGAATGCTGTACTTGGAAAGGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| CDS-3UTR GCA 90 bp | TCACCTAGCCATGTGTGTCCTCTGTCCCTAGTTCAGCTTTCACCTAACTCAGCTAGCACCCAGCTCTGCTaGTGCCTCCTCATTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSHVCPLSLVQLSPNSASTQLC*CLLIQW Trigger: CCACTGAATGAGGAGGCAGCAGCAGAGCTGGGTGCT...AGCTGAGTTAGGTGAAAGCTGAACTAGGGACAGAGGACACACATGGCTAGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| CDS-3UTR CCA 90 bp | GGTGATCCTGAGAATACCGTGAAACAAACAGGTGGGTGGTGGCACTGGCCCACATGCATCCTCATTCAGTaGCTTGATGGCCTCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GDPENTVKQTGGWWHWPTCILIQ*LDGLSM Trigger: CATGCTGAGGCCATCAAGCCACTGAATGAGGATGCA...TGTGGGCCAGTGCCACCACCCACCTGTTTGTTTCACGGTATTCTCAGGATCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGTTACTCTGTTTCCTCCATCACATTCCCAGCAGTAAGTCATGTCTGGGGGACCCAGCTCTGCTGCTaGCTCCTCATTCAGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGYSVSSITFPAVSHVWGTQLCC*LLIQWL Trigger: AAGCCACTGAATGAGGAGGCAGCAGCAGAGCTGGGT...CCCCCAGACATGACTTACTGCTGGGAATGTGATGGAGGAAACAGAGTAACCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGTACAGTTTCAGTATTGGTTTCAGTCTGGGGAATCCTGGGGATGGGTCGTTCCTCCTCCTTATTaGGCTGCTGAGTCTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TEVQFQYWFQSGESWGWVVPPPY*AAESGG Trigger: GCCACCAGACTCAGCAGCGCAATAAGGAGGAGGAAC...GACCCATCCCCAGGATTCCCCAGACTGAAACCAATACTGAAACTGTACCTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| CDS-3UTR CCA 90 bp | GCCCTCCTTTCCAAGTACAGCATTCAAGCAATGGTGGTTTTGGTTAGGGGAGCTCATCCAGTGAGTTCCTaGGCAATGCTGCCTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLSKYSIQAMVVLVRGAHPVSS*AMLPAP Trigger: AGGTGCAGGCAGCATTGCCCAGGAACTCACTGGATG...AGCTCCCCTAACCAAAACCACCATTGCTTGAATGCTGTACTTGGAAAGGAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTTCCAGAACGGTGGGAGAACAGGTTACTCTGTTTCCTCCATCACATTCCCATGCTGCCTGGCACTTaGAAGTACAGTGAGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLPERWENRLLCFLHHIPMLPGT*KYSEHC Trigger: GCAATGCTCACTGTACTTCCAAGTGCCAGGCAGCAT...GGGAATGTGATGGAGGAAACAGAGTAACCTGTTCTCCCACCGTTCTGGAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGAAGGGTTCCTGTCATGTCCCACCAGTGGGTTAAAGAGACCCCGTGGGCAATCTTTACAGATCTaGGTTCTGAACTTCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELEGFLSCPTSGLKRPRGQSLQI*VLNFCS Trigger: GCTACAGAAGTTCAGAACCCAGATCTGTAAAGATTG...CCCACGGGGTCTCTTTAACCCACTGGTGGGACATGACAGGAACCCTTCCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| CDS-3UTR GCA 90 bp | CACCAACTTCAGCTTCTTCTAGAAGAAACTGAGGTACAGTTTCAGTATTGGTTTCGGCCCACCTCATCCTaGAGAGCGTTCCAGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HQLQLLLEETEVQFQYWFRPTSS*RAFQAA Trigger: GGCAGCCTGGAACGCTCTGCAGGATGAGGTGGGCCG...AAACCAATACTGAAACTGTACCTCAGTTTCTTCTAGAAGAAGCTGAAGTTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CAA 72 bp | TATGTCATGATCAGACTTGAGCCCTGGTTCCATCTTTaGCCTTTGCCAGAGCAGTGGAGAGTCAGGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YVMIRLEPWFHL*PLPEQWRVRCL Trigger: CAGACACCTGACTCTCCACTGCTCTGGCAAAGGCAAAAGATGGAACCAGGGCTCAAGTCTGATCATGACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| 3UTR CAA 72 bp | CTCCTTTCCAAGTACAGCATTCAAGCAATGGTGGTTTaGGTTAGGGGAGCTGGAAGGGTTCCTGTCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSKYSIQAMVV*VRGAGRVPVMS Trigger: GGACATGACAGGAACCCTTCCAGCTCCCCTAACCAAAACCACCATTGCTTGAATGCTGTACTTGGAAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAACGGGAACATCAATTGCACTCTGCTGCCTCCATGGGAGCTACATTGACCCTATTTCTTGGAAGATaGTGCCTGGCACTTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: REREHQLHSAASMGATLTLFLGR*CLALGS Trigger: ACTTCCAAGTGCCAGGCAGCATCTTCCAAGAAATAG...GGTCAATGTAGCTCCCATGGAGGCAGCAGAGTGCAATTGATGTTCCCGTTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAGTTATTTGGTTTTCTGGAATGTCCCATTTGGACAGAAGGTGAGGCTGCTTTGATGGCCTCAGCATaGAAGCCCATGATGCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RELFGFLECPIWTEGEAALMASA*KPMMRI Trigger: GATGCGCATCATGGGCTTCCATGCTGAGGCCATCAA...AGCAGCCTCACCTTCTGTCCAAATGGGACATTCCAGAAAACCAAATAACTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| CDS-3UTR CCA 90 bp | CTTCAGCTTCTTCTAGAAGAAACTGAGGTACAGTTTCAGTATTGGTTTCAGTCTACCCAGTGGTACAGCTaGGCTGGCGGTAGGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: LQLLLEETEVQFQYWFQSTQWYS*AGGRQM Trigger: CATCTGCCTACCGCCAGCCCAGCTGTACCACTGGGT...AGACTGAAACCAATACTGAAACTGTACCTCAGTTTCTTCTAGAAGAAGCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| CDS-3UTR GCA 90 bp | CACCAACTTCAGCTTCTTCTAGAAGAAACTGAGGTACAGTTTCAGTATTGGTTTCTCAGCACCCAGCTCTaGTGCTGCCTCCTCATTCAG | + |
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Preference number: 4 (lower is better) Translates to: HQLQLLLEETEVQFQYWFLSTQL*CCLLIQ Trigger: CTGAATGAGGAGGCAGCAGCAGAGCTGGGTGCTGAG...AAACCAATACTGAAACTGTACCTCAGTTTCTTCTAGAAGAAGCTGAAGTTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| CDS-3UTR CCA 90 bp | CCCAACACACTGCCCTCCTTTCCAAGTACAGCATTCAAGCAATGGTGGTTTTGGTTCAGGCTTAAGCTCTaGCTCATAGCAATCTTTACA | + |
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Preference number: 4 (lower is better) Translates to: PNTLPSFPSTAFKQWWFWFRLKL*LIAIFT Trigger: TGTAAAGATTGCTATGAGCCAGAGCTTAAGCCTGAA...CCAAAACCACCATTGCTTGAATGCTGTACTTGGAAAGGAGGGCAGTGTGTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| 3UTR CAA 72 bp | TCTTTCAATATGGTCATCCTAAATTTAGGGTGGGTCTaGTATTCAGGGCAGGTGTCCTTGCAAGAGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: SFNMVILNLGWV*YSGQVSLQETG Trigger: ACCTGTCTCTTGCAAGGACACCTGCCCTGAATACAAGACCCACCCTAAATTTAGGATGACCATATTGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| CDS GCA 90 bp | GGCCAGTGCCAGGCGGCCCACCTCATCCTGCAGAGCGTTCCAGGCTaGCCGCTGTTCCTCCTCCTTATTGCGCTGCTGAGTCTGGTGGCG | + |
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Preference number: 5 (lower is better) Translates to: GQCQAAHLILQSVPG*PLFLLLIALLSLVA Trigger: CGCCACCAGACTCAGCAGCGCAATAAGGAGGAGGAACAGCGGGCAGCCTGGAACGCTCTGCAGGATGAGGTGGGCCGCCTGGCACTGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| CDS GCA 90 bp | GCCTGCAGCGCCTCTAAGGCCAGTGCCAGGCGGCCCACCTCATCCTaGAGAGCGTTCCAGGCTGCCCGCTGTTCCTCCTCCTTATTGCGC | + |
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Preference number: 5 (lower is better) Translates to: ACSASKASARRPTSS*RAFQAARCSSSLLR Trigger: GCGCAATAAGGAGGAGGAACAGCGGGCAGCCTGGAACGCTCTGCAGGATGAGGTGGGCCGCCTGGCACTGGCCTTAGAGGCGCTGCAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| CDS TCA 90 bp | CGACAGCACCGTGGCCACCTGCGCCACTTCCCTGCGGTGTTTCGATaGCTTCTGGCGCCAGAACTCCAGCAGCAGACAGCTGCCCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RQHRGHLRHFPAVFR*LLAPELQQQTAARS Trigger: GCTGCGGGCAGCTGTCTGCTGCTGGAGTTCTGGCGCCAGAAGTCATCGAAACACCGCAGGGAAGTGGCGCAGGTGGCCACGGTGCTGTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| CDS GCA 90 bp | CATCCTCCCGCAGCGACAGCACCGTGGCCACCTGCGCCACTTCCCTaGGGTGTTTCGATGACTTCTGGCGCCAGAACTCCAGCAGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: HPPAATAPWPPAPLP*GVSMTSGARTPAAD Trigger: GTCTGCTGCTGGAGTTCTGGCGCCAGAAGTCATCGAAACACCGCAGGGAAGTGGCGCAGGTGGCCACGGTGCTGTCGCTGCGGGAGGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| CDS TCA 90 bp | GGCGCCAGAACTCCAGCAGCAGACAGCTGCCCGCAGCAGCAAAGATaGTGGCTTCACCCAGCAGGTTCGCACCCAGCTCAGCCGCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: GARTPAADSCPQQQR*WLHPAGSHPAQPLH Trigger: ATGCAGCGGCTGAGCTGGGTGCGAACCTGCTGGGTGAAGCCATCATCTTTGCTGCTGCGGGCAGCTGTCTGCTGCTGGAGTTCTGGCGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| CDS-3UTR CAA 90 bp | CCCATCTGTCCCCAGAGACCAGGGCACGTTAGCTGGCACCATTTGGGGGTGGGCTGCCCGCAACTCTGCTaGCAACTCTGTCCGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: PICPQRPGHVSWHHLGVGCPQLC*QLCPQL Trigger: GAGCTGCGGACAGAGTTGCAAGCAGAGTTGCGGGCA...GCCCACCCCCAAATGGTGCCAGCTAACGTGCCCTGGTCTCTGGGGACAGATGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| CDS GCA 90 bp | GCCCGCAGCTCATCCAGTGAGTTCCTGGGCAATGCTGCCTGCACCTaGACCTGCACCTCGTCCAGCATGTTCTCCAGGTATTCCACATCC | + |
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Preference number: 5 (lower is better) Translates to: ARSSSSEFLGNAACT*TCTSSSMFSRYSTS Trigger: GGATGTGGAATACCTGGAGAACATGCTGGACGAGGTGCAGGTGCAGGTGCAGGCAGCATTGCCCAGGAACTCACTGGATGAGCTGCGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| CDS GCA 90 bp | AGCTCATCCAGTGAGTTCCTGGGCAATGCTGCCTGCACCTGCACCTaGACCTCGTCCAGCATGTTCTCCAGGTATTCCACATCCTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: SSSSEFLGNAACTCT*TSSSMFSRYSTSSR Trigger: GCGGGAGGATGTGGAATACCTGGAGAACATGCTGGACGAGGTGCAGGTGCAGGTGCAGGCAGCATTGCCCAGGAACTCACTGGATGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| CDS-3UTR CAA 90 bp | TTCATAAACCACTCCTTCGTGGCCCAGTGGGTTAGCAAAGAGTGGGTAAGGGAGCGGTTGGCCAGCGGCTaGCTAACCTGCCGGATGCCC | + |
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Preference number: 5 (lower is better) Translates to: FINHSFVAQWVSKEWVRERLASG*LTCRMP Trigger: GGGCATCCGGCAGGTTAGCAAGCCGCTGGCCAACCG...CTCCCTTACCCACTCTTTGCTAACCCACTGGGCCACGAAGGAGTGGTTTATGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| CDS-3UTR CAA 90 bp | CCTGCCCCAGAGGCTTCTGGAACCACACACCACACCACGGTGGCTTCCTGCACTTCCTCATTCAGTGGCTaGATGGTAGTGCCCCGGAAA | + |
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Preference number: 5 (lower is better) Translates to: PAPEASGTTHHTTVASCTSSFSG*MVVPRK Trigger: TTTCCGGGGCACTACCATCAAGCCACTGAATGAGGA...AGTGCAGGAAGCCACCGTGGTGTGGTGTGTGGTTCCAGAAGCCTCTGGGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| CDS-3UTR CAA 90 bp | ACAGGTTACTCTGTTTCCTCCATCACATTCCCAGCAGTAAGTCATGTCTGGGGGCGGTTGGCCAGCGGCTaGCTAACCTGCCGGATGCCC | + |
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Preference number: 5 (lower is better) Translates to: TGYSVSSITFPAVSHVWGRLASG*LTCRMP Trigger: GGGCATCCGGCAGGTTAGCAAGCCGCTGGCCAACCG...CCCCCAGACATGACTTACTGCTGGGAATGTGATGGAGGAAACAGAGTAACCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| CDS-3UTR CAA 90 bp | TGGCTTCCAGAACGGTGGGAGAACAGGTTACTCTGTTTCCTCCATCACATTCCCCAAGGAGGGCATCGCTaGTGCCTGAGCCTGCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: WLPERWENRLLCFLHHIPQGGHR*CLSLQR Trigger: GCGCTGCAGGCTCAGGCACAAGCGATGCCCTCCTTG...GGGAATGTGATGGAGGAAACAGAGTAACCTGTTCTCCCACCGTTCTGGAAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| CDS-3UTR CAA 90 bp | GGGAAGGGGTACTCACACCTCTCTCAGCCTAGGACCCATCTGTCCCCAGAGACCTCCTCATTCAGTGGCTaGATGGCCTCAGCATGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GKGYSHLSQPRTHLSPETSSFSG*MASAWK Trigger: CTTCCATGCTGAGGCCATCAAGCCACTGAATGAGGA...GGTCTCTGGGGACAGATGGGTCCTAGGCTGAGAGAGGTGTGAGTACCCCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| CDS-3UTR CAA 90 bp | TGGCTTCCAGAACGGTGGGAGAACAGGTTACTCTGTTTCCTCCATCACATTCCCGCATCCTTGATACGGTaGGCCAGCGGCTTGCTAACC | + |
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Preference number: 5 (lower is better) Translates to: WLPERWENRLLCFLHHIPASLIR*ASGLLT Trigger: GGTTAGCAAGCCGCTGGCCAACCGTATCAAGGATGC...GGGAATGTGATGGAGGAAACAGAGTAACCTGTTCTCCCACCGTTCTGGAAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| CDS-3UTR CAA 90 bp | GGGAGTTATTTGGTTTTCTGGAATGTCCCATTTGGACAGAAGGTGAGGCTGCTGGCATCCTTGATACGGTaGGCCAGCGGCTTGCTAACC | + |
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Preference number: 5 (lower is better) Translates to: GSYLVFWNVPFGQKVRLLASLIR*ASGLLT Trigger: GGTTAGCAAGCCGCTGGCCAACCGTATCAAGGATGC...CAGCAGCCTCACCTTCTGTCCAAATGGGACATTCCAGAAAACCAAATAACTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| CDS-3UTR CAA 90 bp | CTTCAGCTTCTTCTAGAAGAAACTGAGGTACAGTTTCAGTATTGGTTTCAGTCTCGGCGGGCAGCATCCTaGATACGGTTGGCCAGCGGC | + |
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Preference number: 5 (lower is better) Translates to: LQLLLEETEVQFQYWFQSRRAAS*IRLASG Trigger: GCCGCTGGCCAACCGTATCAAGGATGCTGCCCGCCG...AGACTGAAACCAATACTGAAACTGTACCTCAGTTTCTTCTAGAAGAAGCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| CDS GCA 72 bp | GCCTCTAAGGCCAGTGCCAGGCGGCCCACCTCATCCTaGAGAGCGTTCCAGGCTGCCCGCTGTTCCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: ASKASARRPTSS*RAFQAARCSSS Trigger: GGAGGAGGAACAGCGGGCAGCCTGGAACGCTCTGCAGGATGAGGTGGGCCGCCTGGCACTGGCCTTAGAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| CDS TCA 72 bp | CAGCTCTGCCCGCAGCTCTGCCCGCAGCTCATCCAGTaGGTTCCTGGGCAATGCTGCCTGCACCTGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: QLCPQLCPQLIQ*VPGQCCLHLHL Trigger: CAGGTGCAGGTGCAGGCAGCATTGCCCAGGAACTCACTGGATGAGCTGCGGGCAGAGCTGCGGGCAGAGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| CDS GCA 72 bp | CAGGCGGCCCACCTCATCCTGCAGAGCGTTCCAGGCTaGCCGCTGTTCCTCCTCCTTATTGCGCTGCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: QAAHLILQSVPG*PLFLLLIALLS Trigger: ACTCAGCAGCGCAATAAGGAGGAGGAACAGCGGGCAGCCTGGAACGCTCTGCAGGATGAGGTGGGCCGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| CDS GCA 72 bp | TCCACATCCTCCCGCAGCGACAGCACCGTGGCCACCTaGGCCACTTCCCTGCGGTGTTTCGATGACTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: STSSRSDSTVAT*ATSLRCFDDFW Trigger: CCAGAAGTCATCGAAACACCGCAGGGAAGTGGCGCAGGTGGCCACGGTGCTGTCGCTGCGGGAGGATGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| CDS CAA 72 bp | AAGAACTCGCTGCGGCGGGCAGCATCCTTGATACGGTaGGCCAGCGGCTTGCTAACCTGCCGGATGCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: KNSLRRAASLIR*ASGLLTCRMPK Trigger: CTTGGGCATCCGGCAGGTTAGCAAGCCGCTGGCCAACCGTATCAAGGATGCTGCCCGCCGCAGCGAGTTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063976.9 ENSMUST00000161711.2 |
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| CDS GCA 72 bp | AAGATGCTGCCTGGCACTTGGAAGTACAGTGAGCATTaGAGACCTGACCACGCACCTCCTGCAGCTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: KMLPGTWKYSEH*RPDHAPPAAPP Trigger: GGGAGGAGCTGCAGGAGGTGCGTGGTCAGGTCTGCAATGCTCACTGTACTTCCAAGTGCCAGGCAGCATCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063976.9 |
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| CDS GCA 72 bp | AGTGAGTTCCTGGGCAATGCTGCCTGCACCTGCACCTaGACCTCGTCCAGCATGTTCTCCAGGTATTCCACA | + |
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Preference number: 6 (lower is better) Translates to: SEFLGNAACTCT*TSSSMFSRYST Trigger: TGTGGAATACCTGGAGAACATGCTGGACGAGGTGCAGGTGCAGGTGCAGGCAGCATTGCCCAGGAACTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| CDS GCA 72 bp | TCATCCAGTGAGTTCCTGGGCAATGCTGCCTGCACCTaGACCTGCACCTCGTCCAGCATGTTCTCCAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: SSSEFLGNAACT*TCTSSSMFSRY Trigger: ATACCTGGAGAACATGCTGGACGAGGTGCAGGTGCAGGTGCAGGCAGCATTGCCCAGGAACTCACTGGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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| CDS TCA 72 bp | GCTCTGGCTCATAGCAATCTTTACAGATCTGGGTTCTaGACTTCTGTAGCTCATCTTGAAGCTCTGCCCGCA | + |
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Preference number: 6 (lower is better) Translates to: ALAHSNLYRSGF*TSVAHLEALPA Trigger: TGCGGGCAGAGCTTCAAGATGAGCTACAGAAGTTCAGAACCCAGATCTGTAAAGATTGCTATGAGCCAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161711.2 |
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