Pregenerated sensors for OOSP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041857Ensembl transcript IDs: ENSMUST00000048214.9, ENSMUST00000139158.2, ENSMUST00000186557.2
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAGACCTGCTCGTTTCAGAGGCCCAAGGCTCCGTGGAGACATGGTaGTCTTCGCTTGATGTTGAAAGGTTTGGTTGCACCATCGGAACA | + |
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Preference number: 1 (lower is better) Translates to: SDLLVSEAQGSVETW*SSLDVERFGCTIGT Trigger: TGTTCCGATGGTGCAACCAAACCTTTCAACATCAAGCGAAGATCACCATGTCTCCACGGAGCCTTGGGCCTCTGAAACGAGCAGGTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139158.2 ENSMUST00000186557.2 |
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| 3UTR GCA 90 bp | TCTTCGCTTGATGTTGAAAGGTTTGGTTGCACCATCGGAACAGTTTaGTCATCTCTTCTTGCCCTCATATCTTCTGTCCATCCAGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: SSLDVERFGCTIGTV*SSLLALISSVHPGG Trigger: TCCTCCTGGATGGACAGAAGATATGAGGGCAAGAAGAGATGAGCAAACTGTTCCGATGGTGCAACCAAACCTTTCAACATCAAGCGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139158.2 |
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| 3UTR CAA 90 bp | TCACCAGACCATCTACATTCTGGAGAAATGGAAAACCGAGAAGTTTaGATCCATGAAGCTAGGTACTTCAGCAGCCTCAGACCTGCTCGT | + |
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Preference number: 2 (lower is better) Translates to: SPDHLHSGEMENREV*IHEARYFSSLRPAR Trigger: ACGAGCAGGTCTGAGGCTGCTGAAGTACCTAGCTTCATGGATCAAAACTTCTCGGTTTTCCATTTCTCCAGAATGTAGATGGTCTGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139158.2 ENSMUST00000186557.2 |
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| 3UTR TCA 72 bp | CTCGTTTCAGAGGCCCAAGGCTCCGTGGAGACATGGTaGTCTTCGCTTGATGTTGAAAGGTTTGGTTGCACC | + |
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Preference number: 3 (lower is better) Translates to: LVSEAQGSVETW*SSLDVERFGCT Trigger: GGTGCAACCAAACCTTTCAACATCAAGCGAAGATCACCATGTCTCCACGGAGCCTTGGGCCTCTGAAACGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139158.2 ENSMUST00000186557.2 |
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| 3UTR GCA 72 bp | TGGTTGCACCATCGGAACAGTTTGCTCATCTCTTCTTaGCCTCATATCTTCTGTCCATCCAGGAGGATCACC | + |
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Preference number: 3 (lower is better) Translates to: WLHHRNSLLISS*PHIFCPSRRIT Trigger: GGTGATCCTCCTGGATGGACAGAAGATATGAGGGCAAGAAGAGATGAGCAAACTGTTCCGATGGTGCAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139158.2 |
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| 3UTR GCA 72 bp | GATGTTGAAAGGTTTGGTTGCACCATCGGAACAGTTTaGTCATCTCTTCTTGCCCTCATATCTTCTGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: DVERFGCTIGTV*SSLLALISSVH Trigger: ATGGACAGAAGATATGAGGGCAAGAAGAGATGAGCAAACTGTTCCGATGGTGCAACCAAACCTTTCAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139158.2 |
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| 3UTR TCA 72 bp | ATCTACATTCTGGAGAAATGGAAAACCGAGAAGTTTTaGTCCATGAAGCTAGGTACTTCAGCAGCCTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: IYILEKWKTEKF*SMKLGTSAASD Trigger: GTCTGAGGCTGCTGAAGTACCTAGCTTCATGGATCAAAACTTCTCGGTTTTCCATTTCTCCAGAATGTAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139158.2 ENSMUST00000186557.2 |
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| 3UTR-3UTR CAA 90 bp | GACCATCTACATTCTGGAGAAATGGAAAACCGAGAAGTTTTGATCCATGAAGCTTTTGCTCATCTCTTCTaGCCCTCATATCTTCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: DHLHSGEMENREVLIHEAFAHLF*PSYLLS Trigger: GGACAGAAGATATGAGGGCAAGAAGAGATGAGCAAA...AGCTTCATGGATCAAAACTTCTCGGTTTTCCATTTCTCCAGAATGTAGATGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139158.2 |
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| 3UTR-3UTR CAA 90 bp | GACCATCTACATTCTGGAGAAATGGAAAACCGAGAAGTTTTGATCCATGAAGCTTTGATGTTGAAAGGTTaGGTTGCACCATCGGAACAG | + |
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Preference number: 3 (lower is better) Translates to: DHLHSGEMENREVLIHEALMLKG*VAPSEQ Trigger: CTGTTCCGATGGTGCAACCAAACCTTTCAACATCAA...AGCTTCATGGATCAAAACTTCTCGGTTTTCCATTTCTCCAGAATGTAGATGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139158.2 ENSMUST00000186557.2 |
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| 3UTR-3UTR CAA 90 bp | GAAATCACCAGACCATCTACATTCTGGAGAAATGGAAAACCGAGAAGTTTTGATTTGATGTTGAAAGGTTaGGTTGCACCATCGGAACAG | + |
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Preference number: 3 (lower is better) Translates to: EITRPSTFWRNGKPRSFDLMLKG*VAPSEQ Trigger: CTGTTCCGATGGTGCAACCAAACCTTTCAACATCAA...ATCAAAACTTCTCGGTTTTCCATTTCTCCAGAATGTAGATGGTCTGGTGATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139158.2 ENSMUST00000186557.2 |
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| 3UTR CAA 72 bp | AGGCCCAAGGCTCCGTGGAGACATGGTGATCTTCGCTaGATGTTGAAAGGTTTGGTTGCACCATCGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: RPKAPWRHGDLR*MLKGLVAPSEQ Trigger: CTGTTCCGATGGTGCAACCAAACCTTTCAACATCAAGCGAAGATCACCATGTCTCCACGGAGCCTTGGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139158.2 ENSMUST00000186557.2 |
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| CDS-3UTR CCA 90 bp | TGCTCATCTCTTCTTGCCCTCATATCTTCTGTCCATCCAGGAGGATCACCAGTGCTTAGATGGAACCAGTaGTCGGCACATTGCAGACTA | + |
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Preference number: 4 (lower is better) Translates to: CSSLLALISSVHPGGSPVLRWNQ*SAHCRL Trigger: TAGTCTGCAATGTGCCGACCACTGGTTCCATCTAAG...CACTGGTGATCCTCCTGGATGGACAGAAGATATGAGGGCAAGAAGAGATGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139158.2 |
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| CDS-3UTR GCA 90 bp | CATATCTTCTGTCCATCCAGGAGGATCACCAGTGAAATCTCCTCTACTTTCTGCCAGTGGTCGGCACATTaGAGACTAATGGCTGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: HIFCPSRRITSEISSTFCQWSAH*RLMAVQ Trigger: TTGGACAGCCATTAGTCTGCAATGTGCCGACCACTG...GCAGAAAGTAGAGGAGATTTCACTGGTGATCCTCCTGGATGGACAGAAGATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139158.2 |
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| CDS-3UTR CCA 90 bp | GATGTTGAAAGGTTTGGTTGCACCATCGGAACAGTTTGCTCATCTCTTCTTGCCTTCATAGGTATCATTTaGCCAGGTAGTGGTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: DVERFGCTIGTVCSSLLAFIGII*PGSGHR Trigger: CCTGTGACCACTACCTGGCCAAATGATACCTATGAA...GGCAAGAAGAGATGAGCAAACTGTTCCGATGGTGCAACCAAACCTTTCAACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139158.2 |
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| 3UTR CAA 72 bp | TGGAGACATGGTGATCTTCGCTTGATGTTGAAAGGTTaGGTTGCACCATCGGAACAGTTTGCTCATCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: WRHGDLRLMLKG*VAPSEQFAHLF Trigger: GAAGAGATGAGCAAACTGTTCCGATGGTGCAACCAAACCTTTCAACATCAAGCGAAGATCACCATGTCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139158.2 ENSMUST00000186557.2 |
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| CDS-3UTR TCA 90 bp | GTTGAAAGGTTTGGTTGCACCATCGGAACAGTTTGCTCATCTCTTCTTGCCCTCTCCATAAAAATGTTGTaGAATATCGTAGGCCTGATC | + |
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Preference number: 4 (lower is better) Translates to: VERFGCTIGTVCSSLLALSIKML*NIVGLI Trigger: GATCAGGCCTACGATATTTCACAACATTTTTATGGA...GAGGGCAAGAAGAGATGAGCAAACTGTTCCGATGGTGCAACCAAACCTTTCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139158.2 |
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| 3UTR CAA 72 bp | CATCTACATTCTGGAGAAATGGAAAACCGAGAAGTTTaGATCCATGAAGCTAGGTACTTCAGCAGCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: HLHSGEMENREV*IHEARYFSSLR Trigger: TCTGAGGCTGCTGAAGTACCTAGCTTCATGGATCAAAACTTCTCGGTTTTCCATTTCTCCAGAATGTAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139158.2 ENSMUST00000186557.2 |
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| CDS-3UTR CCA 90 bp | CCAGACCATCTACATTCTGGAGAAATGGAAAACCGAGAAGTTTTGATCCATGAAAGGACTCTGATTTATTaGCAATGCCGCAGGAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: PDHLHSGEMENREVLIHERTLIY*QCRRSK Trigger: CTTACTCCTGCGGCATTGCCAATAAATCAGAGTCCT...TTCATGGATCAAAACTTCTCGGTTTTCCATTTCTCCAGAATGTAGATGGTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139158.2 |
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| CDS-3UTR GCA 90 bp | CCAGACCATCTACATTCTGGAGAAATGGAAAACCGAGAAGTTTTGATCCATGAAATCTCCTCTACTTTCTaGTTCACAGAAATGAGGACT | + |
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Preference number: 4 (lower is better) Translates to: PDHLHSGEMENREVLIHEISSTF*FTEMRT Trigger: AGTCCTCATTTCTGTGAAGCAGAAAGTAGAGGAGAT...TTCATGGATCAAAACTTCTCGGTTTTCCATTTCTCCAGAATGTAGATGGTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186557.2 |
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| CDS GCA 72 bp | GGCCTGATCCTTAGATGGAACCAGTGGTCGGCACATTaGAGACTAATGGCTGTCCAATCATCAGCACAAGTC | + |
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Preference number: 6 (lower is better) Translates to: GLILRWNQWSAH*RLMAVQSSAQV Trigger: GACTTGTGCTGATGATTGGACAGCCATTAGTCTGCAATGTGCCGACCACTGGTTCCATCTAAGGATCAGGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048214.9 ENSMUST00000139158.2 |
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| CDS TCA 72 bp | CCCTCATATCTTCTGTCCATCCAGGAGGATCACCAGTaGAATCTCCTCTACTTTCTGCTTCACAGAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: PSYLLSIQEDHQ*NLLYFLLHRNE Trigger: CTCATTTCTGTGAAGCAGAAAGTAGAGGAGATTTCACTGGTGATCCTCCTGGATGGACAGAAGATATGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048214.9 |
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| CDS GCA 72 bp | TCCAGGAGGATCACCAGTGAAATCTCCTCTACTTTCTaGTTCACAGAAATGAGGACTCTGACTGTCCAATCA | + |
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Preference number: 6 (lower is better) Translates to: SRRITSEISSTF*FTEMRTLTVQS Trigger: TGATTGGACAGTCAGAGTCCTCATTTCTGTGAAGCAGAAAGTAGAGGAGATTTCACTGGTGATCCTCCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186557.2 |
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| CDS GCA 72 bp | TCCAGGAGGATCACCAGTGAAATCTCCTCTACTTTCTaGTTCACAGAAATGAGGACTCTGATTGTGCATAAC | + |
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Preference number: 6 (lower is better) Translates to: SRRITSEISSTF*FTEMRTLIVHN Trigger: GTTATGCACAATCAGAGTCCTCATTTCTGTGAAGCAGAAAGTAGAGGAGATTTCACTGGTGATCCTCCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048214.9 |
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