Pregenerated sensors for OOG4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047799Ensembl transcript IDs: ENSMUST00000061277.11, ENSMUST00000073641.4
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTaGTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTCAGACATTTA | + |
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Preference number: 1 (lower is better) Translates to: EKSAWHFLQMQHPFS*SEEDLAFPMCVRHL Trigger: TAAATGTCTGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| 3UTR GCA 90 bp | CAAACTACAATAGTACAAGAGAAGAAAAGAGTGCTTGGCACTTTTTaGAGATGCAACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: QTTIVQEKKRVLGTF*RCNIHSLAQRKILP Trigger: AGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTCTTCTCTTGTACTATTGTAGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| 3UTR CAA 90 bp | AGAAAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTaGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTCAGACATTT | + |
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Preference number: 2 (lower is better) Translates to: RKECLALFADATSIL*LRGRSCLSNVCQTF Trigger: AAATGTCTGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| 3UTR CAA 90 bp | TCAAACTACAATAGTACAAGAGAAGAAAAGAGTGCTTGGCACTTTTaGCAGATGCAACATCCATTCTCTTGCTCAGAGGAAGATCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: SNYNSTREEKSAWHF*QMQHPFSCSEEDLA Trigger: GGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTCTTCTCTTGTACTATTGTAGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| 3UTR GCA 72 bp | GCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTaGTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: AWHFLQMQHPFS*SEEDLAFPMCV Trigger: GACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| 3UTR GCA 72 bp | GATGCAACATCCATTCTCTTGCTCAGAGGAAGATCTTaGCTTTCCAATGTGTGTCAGACATTTAGGTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: DATSILLLRGRS*LSNVCQTFRCL Trigger: CAAGCACCTAAATGTCTGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| 3UTR TCA 72 bp | GGGGGACAATCTTCTCATAGAAGGGTGCCCCTATTATaGCACACTCAAACTACAATAGTACAAGAGAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: GGQSSHRRVPLL*HTQTTIVQEKK Trigger: TTTCTTCTCTTGTACTATTGTAGTTTGAGTGTGTCATAATAGGGGCACCCTTCTATGAGAAGATTGTCCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| 3UTR CCA 72 bp | TCAAACTACAATAGTACAAGAGAAGAAAAGAGTGCTTaGCACTTTTTGCAGATGCAACATCCATTCTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: SNYNSTREEKSA*HFLQMQHPFSC Trigger: GCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTCTTCTCTTGTACTATTGTAGTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR TCA 90 bp | AGATGCAACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGGCTGCTGCTGTGTCATaGACTCTGGCAAGCCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: RCNIHSLAQRKILPFQCVAAAVS*TLASLY Trigger: GTAGAGGCTTGCCAGAGTTCATGACACAGCAGCAGC...CACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR TCA 90 bp | ACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTCAGACAGCTGCTGCTGTGTCATaGACTCTGGCAAGCCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: TSILLLRGRSCLSNVCQTAAAVS*TLASLY Trigger: GTAGAGGCTTGCCAGAGTTCATGACACAGCAGCAGC...TGTCTGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR TCA 90 bp | CAGATGCAACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGCTGCCTATTGGCCCTaGTTATGTCCAGAAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QMQHPFSCSEEDLAFPMCAAYWP*LCPEAQ Trigger: CTGAGCTTCTGGACATAATCAGGGCCAATAGGCAGC...ACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR TCA 90 bp | AGATGCAACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGGCTGCCTATTGGCCCTaGTTATGTCCAGAAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RCNIHSLAQRKILPFQCVAAYWP*LCPEAQ Trigger: CTGAGCTTCTGGACATAATCAGGGCCAATAGGCAGC...CACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR TCA 90 bp | ACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTCAGACATCTGGGGTAGGTTCTTaGGAGCAGAAATGGCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: TSILLLRGRSCLSNVCQTSGVGS*EQKWPR Trigger: CCTTGGCCATTTCTGCTCTCAAGAACCTACCCCAGA...TGTCTGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073641.4 |
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| CDS-3UTR CCA 90 bp | GAAAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGCTCAGAGGTTCTGGAGGGCGGGTaGGGGGTTGATATTCACAAT | + |
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Preference number: 4 (lower is better) Translates to: EKSAWHFLQMQHPFSCSEVLEGG*GVDIHN Trigger: ATTGTGAATATCAACCCCCCACCCGCCCTCCAGAAC...CTCTGAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000073641.4 |
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| CDS-3UTR GCA 90 bp | GCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGCTCAGAGGAAGATCTTCAGTTCTCCATTGGCTaGTGCTGTGTCATGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AWHFLQMQHPFSCSEEDLQFSIG*CCVMNS Trigger: AGAGTTCATGACACAGCAGCAGCCAATGGAGAACTG...AAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR GCA 90 bp | AACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTCAGACGGCTGCTTCAAAAATTaGTGGGAACAGATTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: NIHSLAQRKILPFQCVSDGCFKN*WEQILG Trigger: CCCCAGAATCTGTTCCCAGCAATTTTTGAAGCAGCC...GTCTGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073641.4 |
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| CDS-3UTR CCA 90 bp | TGCAACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTCAAGGACAGTTCTCCATTaGCTGCTGCTGTGTCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: CNIHSLAQRKILPFQCVSRTVLH*LLLCHE Trigger: TTCATGACACAGCAGCAGCCAATGGAGAACTGTCCT...TGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR TCA 90 bp | AAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGCTCAGAGGAATAAGTCACAAGAAGTaGGGCAAAGAGTCTCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: KECLALFADATSILLLRGISHKK*GKESPR Trigger: CCTTGGAGACTCTTTGCCTCACTTCTTGTGACTTAT...TCCTCTGAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR GCA 90 bp | CAAGAGAAGAAAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTTTCTCCATTGGCTGCTaGTGTGTCATGAACTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: QEKKRVLGTFCRCNIHSLFSIGC*CVMNSG Trigger: GCCAGAGTTCATGACACAGCAGCAGCCAATGGAGAA...AAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTCTTCTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CCA 90 bp | AACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTCAGACAGATTCTGCAGACAGTaGAATTTGGGAAGGCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: NIHSLAQRKILPFQCVSDRFCRQ*NLGRRE Trigger: TTCTCGCCTTCCCAAATTCCACTGTCTGCAGAATCT...GTCTGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CCA 90 bp | AAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGCTCAGAGGATTGACCTTTGTGAGATaGGAACATTGGCTTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KECLALFADATSILLLRGLTFVR*EHWLRA Trigger: TGCCCTAAGCCAATGTTCCCATCTCACAAAGGTCAA...TCCTCTGAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CCA 90 bp | AACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTCAGACTTGACCTTTGTGAGATaGGAACATTGGCTTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: NIHSLAQRKILPFQCVSDLTFVR*EHWLRA Trigger: TGCCCTAAGCCAATGTTCCCATCTCACAAAGGTCAA...GTCTGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CCA 90 bp | AAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGCTCAGAGGAAGATACATTTTGAGGTaGACACTCTTCACAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: KECLALFADATSILLLRGRYILR*TLFTAR Trigger: GCGAGCTGTGAAGAGTGTCCACCTCAAAATGTATCT...TCCTCTGAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073641.4 |
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| 3UTR CAA 72 bp | TGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTaGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: CLALFADATSIL*LRGRSCLSNVC Trigger: ACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR TCA 90 bp | CAACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTCAGATACAATTCCTTCAAGTaGAGCTCCTGTATACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: QHPFSCSEEDLAFPMCVRYNSFK*SSCIQP Trigger: AGGCTGTATACAGGAGCTTCACTTGAAGGAATTGTA...TCTGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR TCA 90 bp | AGATGCAACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTACAATTCCTTCAAGTaGAGCTCCTGTATACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RCNIHSLAQRKILPFQCVYNSFK*SSCIQP Trigger: AGGCTGTATACAGGAGCTTCACTTGAAGGAATTGTA...CACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR TCA 90 bp | CGACTTACAATTTTGTCCATTTCTAATACTCAGCTTCCATTTCTTTGTTCCACAGCTTCCCCAGGCACCTaGGGAAGTCTTTCAGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: RLTILSISNTQLPFLCSTASPGT*GSLSGC Trigger: ACAACCTGAAAGACTTCCTCAGGTGCCTGGGGAAGC...TGTGGAACAAAGAAATGGAAGCTGAGTATTAGAAATGGACAAAATTGTAAGTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR TCA 90 bp | TGCAACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTCAAGAACTCCAAGAGGATaGAAGACTAAACCACGCAAA | + |
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Preference number: 4 (lower is better) Translates to: CNIHSLAQRKILPFQCVSRTPRG*KTKPRK Trigger: TTTGCGTGGTTTAGTCTTTCATCCTCTTGGAGTTCT...TGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR TCA 90 bp | AACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTCAGACTCGAAAGATACATTTTaGGGTGGACACTCTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: NIHSLAQRKILPFQCVSDSKDTF*GGHSSQ Trigger: CTGTGAAGAGTGTCCACCTCAAAATGTATCTTTCGA...GTCTGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073641.4 |
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| CDS-3UTR GCA 90 bp | GAGAAGAAAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGCTGGAGCGATCATTTTGTaGAAGCAGTATATCCACTCC | + |
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Preference number: 4 (lower is better) Translates to: EKKRVLGTFCRCNIHSLAGAIIL*KQYIHS Trigger: GGAGTGGATATACTGCTTGCACAAAATGATCGCTCC...AGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTCTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CCA 90 bp | GAAAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGCTCAGAGACTGCAACAAGTATGTaGCAGATTCATCAAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: EKSAWHFLQMQHPFSCSETATSM*QIHQVH Trigger: GTGGACTTGATGAATCTGCCACATACTTGTTGCAGT...CTCTGAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CCA 90 bp | CAAGAGAAGAAAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGTGAGATGGGAACATTaGCTTAGGGCAGGCAAAATG | + |
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Preference number: 4 (lower is better) Translates to: QEKKRVLGTFCRCNIHSLVRWEH*LRAGKM Trigger: CATTTTGCCTGCCCTAAGCCAATGTTCCCATCTCAC...AAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTCTTCTCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR TCA 90 bp | CAAGAGAAGAAAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTATAAGTCACAAGAAGTaGGGCAAAGAGTCTCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: QEKKRVLGTFCRCNIHSLISHKK*GKESPR Trigger: CCTTGGAGACTCTTTGCCTCACTTCTTGTGACTTAT...AAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTCTTCTCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR TCA 90 bp | AGAAGAAAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGCTCAGAACTCCAAGAGGATaGAAGACTAAACCACGCAAA | + |
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Preference number: 4 (lower is better) Translates to: RRKECLALFADATSILLLRTPRG*KTKPRK Trigger: TTTGCGTGGTTTAGTCTTTCATCCTCTTGGAGTTCT...GAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR GCA 90 bp | CTCCTATCAGCAATTGACATCGACTTACAATTTTGTCCATTTCTAATACTCAGCTTCTGCTGGGCCCACTaGAACAAGTATGTGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: LLSAIDIDLQFCPFLILSFCWAH*NKYVAD Trigger: ATCTGCCACATACTTGTTGCAGTGGGCCCAGCAGAA...GCTGAGTATTAGAAATGGACAAAATTGTAAGTCGATGTCAATTGCTGATAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR GCA 90 bp | CAACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTCAGATCAAAGTCTCCAGGTTaGAATTCTTTATCAGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: QHPFSCSEEDLAFPMCVRSKSPG*NSLSAF Trigger: GAAAGCTGATAAAGAATTGCAACCTGGAGACTTTGA...TCTGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR GCA 90 bp | ACCATGCTCCTATCAGCAATTGACATCGACTTACAATTTTGTCCATTTCTAATATTCTGCTGGGCCCACTaGAACAAGTATGTGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: TMLLSAIDIDLQFCPFLIFCWAH*NKYVAD Trigger: ATCTGCCACATACTTGTTGCAGTGGGCCCAGCAGAA...TATTAGAAATGGACAAAATTGTAAGTCGATGTCAATTGCTGATAGGAGCATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CCA 90 bp | CTCCTATCAGCAATTGACATCGACTTACAATTTTGTCCATTTCTAATACTCAGCAGGACAGTTCTCCATTaGCTGCTGCTGTGTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: LLSAIDIDLQFCPFLILSRTVLH*LLLCHE Trigger: TTCATGACACAGCAGCAGCCAATGGAGAACTGTCCT...GCTGAGTATTAGAAATGGACAAAATTGTAAGTCGATGTCAATTGCTGATAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CCA 90 bp | CTCCTATCAGCAATTGACATCGACTTACAATTTTGTCCATTTCTAATACTCAGCGTGAGATGGGAACATTaGCTTAGGGCAGGCAAAATG | + |
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Preference number: 4 (lower is better) Translates to: LLSAIDIDLQFCPFLILSVRWEH*LRAGKM Trigger: CATTTTGCCTGCCCTAAGCCAATGTTCCCATCTCAC...GCTGAGTATTAGAAATGGACAAAATTGTAAGTCGATGTCAATTGCTGATAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CCA 90 bp | CAAGAGAAGAAAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGCCATACAGGTATCATaGCCTTCAAGATCTCTATAC | + |
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Preference number: 4 (lower is better) Translates to: QEKKRVLGTFCRCNIHSLAIQVS*PSRSLY Trigger: GTATAGAGATCTTGAAGGCCATGATACCTGTATGGC...AAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTCTTCTCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073641.4 |
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| CDS-3UTR GCA 90 bp | GAGAAGAAAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGCTTCAAAGTCTCCAGGTTaGAATTCTTTATCAGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: EKKRVLGTFCRCNIHSLASKSPG*NSLSAF Trigger: GAAAGCTGATAAAGAATTGCAACCTGGAGACTTTGA...AGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTCTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR GCA 90 bp | CATCGACTTACAATTTTGTCCATTTCTAATACTCAGCTTCCATTTCTTTGTTCCCAGTTCTCCATTGGCTaGTGCTGTGTCATGAACTCT | + |
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Preference number: 4 (lower is better) Translates to: HRLTILSISNTQLPFLCSQFSIG*CCVMNS Trigger: AGAGTTCATGACACAGCAGCAGCCAATGGAGAACTG...GGAACAAAGAAATGGAAGCTGAGTATTAGAAATGGACAAAATTGTAAGTCGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR GCA 90 bp | CGACTTACAATTTTGTCCATTTCTAATACTCAGCTTCCATTTCTTTGTTCCACAGGAGCGATCATTTTGTaGAAGCAGTATATCCACTCC | + |
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Preference number: 4 (lower is better) Translates to: RLTILSISNTQLPFLCSTGAIIL*KQYIHS Trigger: GGAGTGGATATACTGCTTGCACAAAATGATCGCTCC...TGTGGAACAAAGAAATGGAAGCTGAGTATTAGAAATGGACAAAATTGTAAGTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CCA 90 bp | CTCCTATCAGCAATTGACATCGACTTACAATTTTGTCCATTTCTAATACTCAGCACTGCAACAAGTATGTaGCAGATTCATCAAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LLSAIDIDLQFCPFLILSTATSM*QIHQVH Trigger: GTGGACTTGATGAATCTGCCACATACTTGTTGCAGT...GCTGAGTATTAGAAATGGACAAAATTGTAAGTCGATGTCAATTGCTGATAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS TCA 90 bp | TCACCCCACAGTCAGGACAGTTCTCCATTGGCTGCTGCTGTGTCATaGACTCTGGCAAGCCTCTACCTTCATAGGATCCACCCCATATTC | + |
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Preference number: 5 (lower is better) Translates to: SPHSQDSSPLAAAVS*TLASLYLHRIHPIF Trigger: GAATATGGGGTGGATCCTATGAAGGTAGAGGCTTGCCAGAGTTCATGACACAGCAGCAGCCAATGGAGAACTGTCCTGACTGTGGGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CAA 90 bp | AACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTCAGACTCAGTAGACTCTGAATaGCCAGGTTCTGGAGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: NIHSLAQRKILPFQCVSDSVDSE*PGSGGR Trigger: CCGCCCTCCAGAACCTGGCAATTCAGAGTCTACTGA...GTCTGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073641.4 |
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| CDS CCA 90 bp | CACCTTCAATTCTTTATTCACCCCACAGTCAGGACAGTTCTCCATTaGCTGCTGCTGTGTCATGAACTCTGGCAAGCCTCTACCTTCATA | + |
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Preference number: 5 (lower is better) Translates to: HLQFFIHPTVRTVLH*LLLCHELWQASTFI Trigger: TATGAAGGTAGAGGCTTGCCAGAGTTCATGACACAGCAGCAGCCAATGGAGAACTGTCCTGACTGTGGGGTGAATAAAGAATTGAAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CAA 90 bp | AAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGCTCAGAGGAGTCAGCTGGCTCAGGTaGGCTGTGTGGTATAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: KECLALFADATSILLLRGVSWLR*AVWYRS Trigger: ACTTCTATACCACACAGCCAACCTGAGCCAGCTGAC...TCCTCTGAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS TCA 90 bp | GCAACAAGTATGTGGCAGATTCATCAAGTCCACCATCCACGAGGTTaGGGTCAGTTGTCACCTTCAATTCTTTATTCACCCCACAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ATSMWQIHQVHHPRG*GQLSPSILYSPHSQ Trigger: CTGACTGTGGGGTGAATAAAGAATTGAAGGTGACAACTGACCTCAACCTCGTGGATGGTGGACTTGATGAATCTGCCACATACTTGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS TCA 90 bp | GTGAGATGGGAACATTGGCTTAGGGCAGGCAAAATGGCACTGATCTaGGAGTCCTCCATAAAACACAACTCTAATTCCAGGGATTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VRWEHWLRAGKMALI*ESSIKHNSNSRDCS Trigger: ACTGCAATCCCTGGAATTAGAGTTGTGTTTTATGGAGGACTCTCAGATCAGTGCCATTTTGCCTGCCCTAAGCCAATGTTCCCATCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CAA 90 bp | AGAAGAAAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGCTCGTCAGCTGGCTCAGGTaGGCTGTGTGGTATAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RRKECLALFADATSILLLVSWLR*AVWYRS Trigger: ACTTCTATACCACACAGCCAACCTGAGCCAGCTGAC...GAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CAA 90 bp | GCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGCTCAGAGGAAGATCTTCGGCTGCTTCAAAAATaGCTGGGAACAGATTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AWHFLQMQHPFSCSEEDLRLLQK*LGTDSG Trigger: CCCAGAATCTGTTCCCAGCAATTTTTGAAGCAGCCG...AAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000073641.4 |
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| CDS TCA 90 bp | GATTGCAGTGTACCTCTAACACTCTCAAGGAGAACTCCAAGAGGATaGAAGACTAAACCACGCAAACTTGTAGCAGTCAGGTTCAGACGT | + |
|
Preference number: 5 (lower is better) Translates to: DCSVPLTLSRRTPRG*KTKPRKLVAVRFRR Trigger: ACGTCTGAACCTGACTGCTACAAGTTTGCGTGGTTTAGTCTTTCATCCTCTTGGAGTTCTCCTTGAGAGTGTTAGAGGTACACTGCAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CAA 90 bp | GAGAAGAAAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGCTTTCTGGGGTAGGTTCTaGAGAGCAGAAATGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: EKKRVLGTFCRCNIHSLAFWGRF*RAEMAK Trigger: CTTGGCCATTTCTGCTCTCAAGAACCTACCCCAGAA...AGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTCTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073641.4 |
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| CDS-3UTR CAA 90 bp | AGATGCAACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGACTGGAGCGATCATTTaGTGCAAGCAGTATATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RCNIHSLAQRKILPFQCVTGAII*CKQYIH Trigger: GTGGATATACTGCTTGCACAAAATGATCGCTCCAGT...CACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CAA 90 bp | AGAAGAAAAGAGTGCTTGGCACTTTTTGCAGATGCAACATCCATTCTCTTGCTCACTGGAGCGATCATTTaGTGCAAGCAGTATATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RRKECLALFADATSILLLTGAII*CKQYIH Trigger: GTGGATATACTGCTTGCACAAAATGATCGCTCCAGT...GAGCAAGAGAATGGATGTTGCATCTGCAAAAAGTGCCAAGCACTCTTTTCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CAA 90 bp | AACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTCAGACAGGAAGTCTTTCAGGTaGTTTCCTAGAAGGGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: NIHSLAQRKILPFQCVSDRKSFR*FPRRVI Trigger: TATCACCCTTCTAGGAAACAACCTGAAAGACTTCCT...GTCTGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CAA 90 bp | ACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTCAGACATTCGAAAGATACATTTaGAGGTGGACACTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: TSILLLRGRSCLSNVCQTFERYI*RWTLFT Trigger: TGTGAAGAGTGTCCACCTCAAAATGTATCTTTCGAA...TGTCTGACACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073641.4 |
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| CDS-3UTR CAA 90 bp | AGATGCAACATCCATTCTCTTGCTCAGAGGAAGATCTTGCCTTTCCAATGTGTGTTCAAAGTCTCCAGGTaGCAATTCTTTATCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RCNIHSLAQRKILPFQCVFKVSR*QFFISF Trigger: AAAGCTGATAAAGAATTGCAACCTGGAGACTTTGAA...CACACATTGGAAAGGCAAGATCTTCCTCTGAGCAAGAGAATGGATGTTGCATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS-3UTR CAA 90 bp | CATCGACTTACAATTTTGTCCATTTCTAATACTCAGCTTCCATTTCTTTGTTCCTTCAAAGTCTCCAGGTaGCAATTCTTTATCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HRLTILSISNTQLPFLCSFKVSR*QFFISF Trigger: AAAGCTGATAAAGAATTGCAACCTGGAGACTTTGAA...GGAACAAAGAAATGGAAGCTGAGTATTAGAAATGGACAAAATTGTAAGTCGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS GCA 72 bp | TTCACCCCACAGTCAGGACAGTTCTCCATTGGCTGCTaGTGTGTCATGAACTCTGGCAAGCCTCTACCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FTPQSGQFSIGC*CVMNSGKPLPS Trigger: TGAAGGTAGAGGCTTGCCAGAGTTCATGACACAGCAGCAGCCAATGGAGAACTGTCCTGACTGTGGGGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS TCA 72 bp | AGTCAGGACAGTTCTCCATTGGCTGCTGCTGTGTCATaGACTCTGGCAAGCCTCTACCTTCATAGGATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SQDSSPLAAAVS*TLASLYLHRIH Trigger: GTGGATCCTATGAAGGTAGAGGCTTGCCAGAGTTCATGACACAGCAGCAGCCAATGGAGAACTGTCCTGACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS TCA 72 bp | GGTAATCCAAGTCTGACTGTGATAAGTCACAAGAAGTaGGGCAAAGAGTCTCCAAGGGCTTCCCCAGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: GNPSLTVISHKK*GKESPRASPGT Trigger: GGTGCCTGGGGAAGCCCTTGGAGACTCTTTGCCTCACTTCTTGTGACTTATCACAGTCAGACTTGGATTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS GCA 72 bp | TTATTCACCCCACAGTCAGGACAGTTCTCCATTGGCTaGTGCTGTGTCATGAACTCTGGCAAGCCTCTACCT | + |
|
Preference number: 6 (lower is better) Translates to: LFTPQSGQFSIG*CCVMNSGKPLP Trigger: AGGTAGAGGCTTGCCAGAGTTCATGACACAGCAGCAGCCAATGGAGAACTGTCCTGACTGTGGGGTGAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS CCA 72 bp | ACAGTTCTCCATTGGCTGCTGCTGTGTCATGAACTCTaGCAAGCCTCTACCTTCATAGGATCCACCCCATAT | + |
|
Preference number: 6 (lower is better) Translates to: TVLHWLLLCHEL*QASTFIGSTPY Trigger: ATATGGGGTGGATCCTATGAAGGTAGAGGCTTGCCAGAGTTCATGACACAGCAGCAGCCAATGGAGAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS CCA 72 bp | TTCTTTATTCACCCCACAGTCAGGACAGTTCTCCATTaGCTGCTGCTGTGTCATGAACTCTGGCAAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FFIHPTVRTVLH*LLLCHELWQAS Trigger: AGAGGCTTGCCAGAGTTCATGACACAGCAGCAGCCAATGGAGAACTGTCCTGACTGTGGGGTGAATAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS TCA 72 bp | CAAAAATTGCTGGGAACAGATTCTGGGGTAGGTTCTTaGGAGCAGAAATGGCCAAGGCCTCATCCCTCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: QKLLGTDSGVGS*EQKWPRPHPSV Trigger: TACTGAGGGATGAGGCCTTGGCCATTTCTGCTCTCAAGAACCTACCCCAGAATCTGTTCCCAGCAATTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073641.4 |
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| CDS CCA 72 bp | ATTACGGCTGCTTCAAAAATTGCTGGGAACAGATTCTaGGGTAGGTTCTTGAGAGCAGAAATGGCCAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ITAASKIAGNRF*GRFLRAEMAKA Trigger: GGCCTTGGCCATTTCTGCTCTCAAGAACCTACCCCAGAATCTGTTCCCAGCAATTTTTGAAGCAGCCGTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073641.4 |
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| CDS CAA 90 bp | TGCAACAAGTATGTGGCAGATTCATCAAGTCCACCATCCACGAGGTaGAGGTCAGTTGTCACCTTCAATTCTTTATTCACCCCACAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CNKYVADSSSPPSTR*RSVVTFNSLFTPQS Trigger: TGACTGTGGGGTGAATAAAGAATTGAAGGTGACAACTGACCTCAACCTCGTGGATGGTGGACTTGATGAATCTGCCACATACTTGTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS TCA 72 bp | ATGTGGCAGATTCATCAAGTCCACCATCCACGAGGTTaGGGTCAGTTGTCACCTTCAATTCTTTATTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: MWQIHQVHHPRG*GQLSPSILYSP Trigger: GGGTGAATAAAGAATTGAAGGTGACAACTGACCTCAACCTCGTGGATGGTGGACTTGATGAATCTGCCACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS TCA 72 bp | GTACCTCTAACACTCTCAAGGAGAACTCCAAGAGGATaGAAGACTAAACCACGCAAACTTGTAGCAGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VPLTLSRRTPRG*KTKPRKLVAVR Trigger: CCTGACTGCTACAAGTTTGCGTGGTTTAGTCTTTCATCCTCTTGGAGTTCTCCTTGAGAGTGTTAGAGGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS TCA 72 bp | GAACATTGGCTTAGGGCAGGCAAAATGGCACTGATCTaGGAGTCCTCCATAAAACACAACTCTAATTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: EHWLRAGKMALI*ESSIKHNSNSR Trigger: CCTGGAATTAGAGTTGTGTTTTATGGAGGACTCTCAGATCAGTGCCATTTTGCCTGCCCTAAGCCAATGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS GCA 72 bp | GAGTCCTCCATAAAACACAACTCTAATTCCAGGGATTaGAGTGTACCTCTAACACTCTCAAGGAGAACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ESSIKHNSNSRD*SVPLTLSRRTP Trigger: TGGAGTTCTCCTTGAGAGTGTTAGAGGTACACTGCAATCCCTGGAATTAGAGTTGTGTTTTATGGAGGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS CAA 72 bp | TATGTGGCAGATTCATCAAGTCCACCATCCACGAGGTaGAGGTCAGTTGTCACCTTCAATTCTTTATTCACC | + |
|
Preference number: 6 (lower is better) Translates to: YVADSSSPPSTR*RSVVTFNSLFT Trigger: GGTGAATAAAGAATTGAAGGTGACAACTGACCTCAACCTCGTGGATGGTGGACTTGATGAATCTGCCACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS CAA 72 bp | CAGATTAAACATTTGGATGTAGCAAATGTGACTCTGTaGGGCTGCCTATTGGCCCTGATTATGTCCAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: QIKHLDVANVTL*GCLLALIMSRS Trigger: GCTTCTGGACATAATCAGGGCCAATAGGCAGCCCAACAGAGTCACATTTGCTACATCCAAATGTTTAATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS CAA 72 bp | TCCACTCCCTCAAGCATAGCCTTCAAAGTCTCCAGGTaGCAATTCTTTATCAGCTTTCCTAAAGAAAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: STPSSIAFKVSR*QFFISFPKERY Trigger: ATACCTTTCTTTAGGAAAGCTGATAAAGAATTGCAACCTGGAGACTTTGAAGGCTATGCTTGAGGGAGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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| CDS TCA 72 bp | AGAAAAACCAACTCTTCTGTGTACAATTCCTTCAAGTaGAGCTCCTGTATACAGCCTGTATTTACAATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RKTNSSVYNSFK*SSCIQPVFTIL Trigger: CAAAATTGTAAATACAGGCTGTATACAGGAGCTTCACTTGAAGGAATTGTACACAGAAGAGTTGGTTTTTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061277.11 ENSMUST00000073641.4 |
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