Pregenerated sensors for OOG3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050810Ensembl transcript IDs: ENSMUST00000050933.9
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAATCTACAATAATCCTAGAGAATAAAAGCATGCTTGACACTTCTTaGAGATGGTACATTCATTCACTAGCTCAGAGGAATATCTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: QSTIILENKSMLDTS*RWYIHSLAQRNILH Trigger: ATGCAAGATATTCCTCTGAGCTAGTGAATGAATGTACCATCTGCAAGAAGTGTCAAGCATGCTTTTATTCTCTAGGATTATTGTAGATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| 3UTR-3UTR TCA 90 bp | ATCCTAGAGAATAAAAGCATGCTTGACACTTCTTGCAGATGGTACATTCATTCATCTCAGACCTTTACATaGTTGACAAATCCATGTTCC | + |
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Preference number: 2 (lower is better) Translates to: ILENKSMLDTSCRWYIHSSQTFT*LTNPCS Trigger: GGAACATGGATTTGTCAATCATGTAAAGGTCTGAGA...TGAATGAATGTACCATCTGCAAGAAGTGTCAAGCATGCTTTTATTCTCTAGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| 3UTR-3UTR CAA 90 bp | CAATCTACAATAATCCTAGAGAATAAAAGCATGCTTGACACTTCTTGCAGATGGTCCCCAATACTAAGCTaGCATTTCTCTGTTCCACAA | + |
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Preference number: 3 (lower is better) Translates to: QSTIILENKSMLDTSCRWSPILS*HFSVPQ Trigger: TTGTGGAACAGAGAAATGCAAGCTTAGTATTGGGGA...CCATCTGCAAGAAGTGTCAAGCATGCTTTTATTCTCTAGGATTATTGTAGATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| 3UTR-3UTR CAA 90 bp | TCAACAAAGGAGAACAATATCCTCATGGAAGTTTGCCTCTATTGTAACATACTCAGAATAAAAGCATGCTaGACACTTCTTGCAGATGGT | + |
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Preference number: 3 (lower is better) Translates to: STKENNILMEVCLYCNILRIKAC*TLLADG Trigger: ACCATCTGCAAGAAGTGTCAAGCATGCTTTTATTCT...GAGTATGTTACAATAGAGGCAAACTTCCATGAGGATATTGTTCTCCTTTGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR TCA 90 bp | AGGAGAACAATATCCTCATGGAAGTTTGCCTCTATTGTAACATACTCAATCTACGCTTCTTCAGGCACCTaGGGATTTCATTCAGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: RRTISSWKFASIVTYSIYASSGT*GFHSGC Trigger: GCAACCTGAATGAAATCCTCAGGTGCCTGAAGAAGC...GTAGATTGAGTATGTTACAATAGAGGCAAACTTCCATGAGGATATTGTTCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CCA 90 bp | CAATCTACAATAATCCTAGAGAATAAAAGCATGCTTGACACTTCTTGCAGATGGTGGGAACAGCATATTTaGCAGGCCCTTGAGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: QSTIILENKSMLDTSCRWWEQHI*QALESR Trigger: TCTGCTCTCAAGGGCCTGCCAAATATGCTGTTCCCA...CCATCTGCAAGAAGTGTCAAGCATGCTTTTATTCTCTAGGATTATTGTAGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CCA 90 bp | CAACAAAGGAGAACAATATCCTCATGGAAGTTTGCCTCTATTGTAACATACTCAAAGTCTTCAGCTTCATaGGATCCAGGCCATATCCCA | + |
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Preference number: 4 (lower is better) Translates to: QQRRTISSWKFASIVTYSKSSAS*DPGHIP Trigger: TGGGATATGGCCTGGATCCCATGAAGCTGAAGACTT...TGAGTATGTTACAATAGAGGCAAACTTCCATGAGGATATTGTTCTCCTTTGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR TCA 90 bp | CAGTCAACAAAGGAGAACAATATCCTCATGGAAGTTTGCCTCTATTGTAACATACAAGTCTGCCCTTCATaGCAGAGAGTTCAGTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: QSTKENNILMEVCLYCNIQVCPS*QRVQLL Trigger: TAACAACTGAACTCTCTGTCATGAAGGGCAGACTTG...TATGTTACAATAGAGGCAAACTTCCATGAGGATATTGTTCTCCTTTGTTGACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR TCA 90 bp | ATCCTAGAGAATAAAAGCATGCTTGACACTTCTTGCAGATGGTACATTCATTCAAGGGAATCTGTGACGTaGTCAAGTGTGAGTTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: ILENKSMLDTSCRWYIHSRESVT*SSVSSR Trigger: TCTTGAACTCACACTTGATCACGTCACAGATTCCCT...TGAATGAATGTACCATCTGCAAGAAGTGTCAAGCATGCTTTTATTCTCTAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CCA 90 bp | CAACAAAGGAGAACAATATCCTCATGGAAGTTTGCCTCTATTGTAACATACTCATCCTACAGAAAGGTATaGGAAGGGCCACATAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: QQRRTISSWKFASIVTYSSYRKV*EGPHRY Trigger: ATACCTATGTGGCCCTTCCCATACCTTTCTGTAGGA...TGAGTATGTTACAATAGAGGCAAACTTCCATGAGGATATTGTTCTCCTTTGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CCA 90 bp | CAGTCAACAAAGGAGAACAATATCCTCATGGAAGTTTGCCTCTATTGTAACATATGCAGAGTAGGTGAATaGAATCTTTTCTCTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QSTKENNILMEVCLYCNICRVGE*NLFSAG Trigger: CCCAGCAGAGAAAAGATTCCATTCACCTACTCTGCA...TATGTTACAATAGAGGCAAACTTCCATGAGGATATTGTTCTCCTTTGTTGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CCA 90 bp | CAATCTACAATAATCCTAGAGAATAAAAGCATGCTTGACACTTCTTGCAGATGGGGAGACAGGGAAATGTaGGAAGTTGAGAAACCAATG | + |
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Preference number: 4 (lower is better) Translates to: QSTIILENKSMLDTSCRWGDREM*EVEKPM Trigger: CATTGGTTTCTCAACTTCCCACATTTCCCTGTCTCC...CCATCTGCAAGAAGTGTCAAGCATGCTTTTATTCTCTAGGATTATTGTAGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CCA 90 bp | CAATCTACAATAATCCTAGAGAATAAAAGCATGCTTGACACTTCTTGCAGATGGTCAGCTGAGTCAGCTTaGATGTGTGCTGTAGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: QSTIILENKSMLDTSCRWSAESA*MCAVEV Trigger: AACTTCTACAGCACACATCCAAGCTGACTCAGCTGA...CCATCTGCAAGAAGTGTCAAGCATGCTTTTATTCTCTAGGATTATTGTAGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR TCA 90 bp | AGTCAACAAAGGAGAACAATATCCTCATGGAAGTTTGCCTCTATTGTAACATACTTTCTGCAGAGTAGGTaGATGGAATCTTTTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SQQRRTISSWKFASIVTYFLQSR*MESFLC Trigger: GCAGAGAAAAGATTCCATTCACCTACTCTGCAGAAA...GTATGTTACAATAGAGGCAAACTTCCATGAGGATATTGTTCTCCTTTGTTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CCA 90 bp | ATCCTAGAGAATAAAAGCATGCTTGACACTTCTTGCAGATGGTACATTCATTCAACTCCAACAAGTATGTaGCAGAATCATCAAGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: ILENKSMLDTSCRWYIHSTPTSM*QNHQVC Trigger: GCAGACTTGATGATTCTGCCACATACTTGTTGGAGT...TGAATGAATGTACCATCTGCAAGAAGTGTCAAGCATGCTTTTATTCTCTAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CCA 90 bp | CATTTATTATATGCAGTCAACAAAGGAGAACAATATCCTCATGGAAGTTTGCCTGAATCTTTTCTCTGCTaGGCCCACTCCAACAAGTAT | + |
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Preference number: 4 (lower is better) Translates to: HLLYAVNKGEQYPHGSLPESFLC*AHSNKY Trigger: ATACTTGTTGGAGTGGGCCCAGCAGAGAAAAGATTC...AGGCAAACTTCCATGAGGATATTGTTCTCCTTTGTTGACTGCATATAATAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CCA 90 bp | CAATCTACAATAATCCTAGAGAATAAAAGCATGCTTGACACTTCTTGCAGATGGTTTACACAGAGTTTCTaGAGACAGGGAAATGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSTIILENKSMLDTSCRWFTQSF*RQGNVG Trigger: TCCCACATTTCCCTGTCTCCAGAAACTCTGTGTAAA...CCATCTGCAAGAAGTGTCAAGCATGCTTTTATTCTCTAGGATTATTGTAGATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR GCA 90 bp | CAATCTACAATAATCCTAGAGAATAAAAGCATGCTTGACACTTCTTGCAGATGGCAATTACCAGCTTTCTaGAGAGTAGGTGAATGGAAT | + |
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Preference number: 4 (lower is better) Translates to: QSTIILENKSMLDTSCRWQLPAF*RVGEWN Trigger: ATTCCATTCACCTACTCTGCAGAAAGCTGGTAATTG...CCATCTGCAAGAAGTGTCAAGCATGCTTTTATTCTCTAGGATTATTGTAGATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CCA 90 bp | CAATCTACAATAATCCTAGAGAATAAAAGCATGCTTGACACTTCTTGCAGATGGACCACATTTAGAACATaGGTTTGTAACAAAGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: QSTIILENKSMLDTSCRWTTFRT*VCNKGN Trigger: ATTGCCTTTGTTACAAACCCATGTTCTAAATGTGGT...CCATCTGCAAGAAGTGTCAAGCATGCTTTTATTCTCTAGGATTATTGTAGATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CCA 90 bp | CATTTATTATATGCAGTCAACAAAGGAGAACAATATCCTCATGGAAGTTTGCCTCTATCACTGTGTCTTTaGTTAAGGTTTCAATTACCA | + |
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Preference number: 4 (lower is better) Translates to: HLLYAVNKGEQYPHGSLPLSLCL*LRFQLP Trigger: TGGTAATTGAAACCTTAACCAAAGACACAGTGATAG...AGGCAAACTTCCATGAGGATATTGTTCTCCTTTGTTGACTGCATATAATAAATG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CCA 90 bp | ACTCAAGAGGGGCAGGGTACAGCTCATAGCTCAGCTGAGTCAGCTTaGATGTGTGCTGTAGAAGTTGTTTCAGGAACAGCAGAGAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: TQEGQGTAHSSAESA*MCAVEVVSGTAERV Trigger: AACTCTCTCTGCTGTTCCTGAAACAACTTCTACAGCACACATCCAAGCTGACTCAGCTGAGCTATGAGCTGTACCCTGCCCCTCTTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CCA 90 bp | ACCATTAATGAAGGCCTCCTCAAATATCACTGGGAACAGCATATTTaGCAGGCCCTTGAGAGCAGAAATGACCAAAGCCTCCTCCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: TINEGLLKYHWEQHI*QALESRNDQSLLPQ Trigger: CTGAGGGAGGAGGCTTTGGTCATTTCTGCTCTCAAGGGCCTGCCAAATATGCTGTTCCCAGTGATATTTGAGGAGGCCTTCATTAATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS GCA 90 bp | ATCAAGAACAGCCTTCAAAGTCTTCAGGTTGCAGTTGTTTGTCAGTaGTCCTACAGAAAGGTATGGGAAGGGCCACATAGGTATCATGGC | + |
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Preference number: 5 (lower is better) Translates to: IKNSLQSLQVAVVCQ*SYRKVWEGPHRYHG Trigger: GCCATGATACCTATGTGGCCCTTCCCATACCTTTCTGTAGGAGCACTGACAAACAACTGCAACCTGAAGACTTTGAAGGCTGTTCTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CCA 90 bp | ACGGGATGCTTCTGTGTCATTAACTCTGGTAAGTCTTCAGCTTCATaGGATCCAGGCCATATCCCACAAAAGTCATGCTGTTCATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: TGCFCVINSGKSSAS*DPGHIPQKSCCSSL Trigger: GAGAGATGAACAGCATGACTTTTGTGGGATATGGCCTGGATCCCATGAAGCTGAAGACTTACCAGAGTTAATGACACAGAAGCATCCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS TCA 90 bp | CCCACTCCAACAAGTATGTGGCAGAATCATCAAGTCTGCCCTTCATaGCAGAGAGTTCAGTTGTTACCCTCAATTCTTTCTTTACCCCAC | + |
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Preference number: 5 (lower is better) Translates to: PTPTSMWQNHQVCPS*QRVQLLPSILSLPH Trigger: GTGGGGTAAAGAAAGAATTGAGGGTAACAACTGAACTCTCTGTCATGAAGGGCAGACTTGATGATTCTGCCACATACTTGTTGGAGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS GCA 90 bp | GAAGTATATCTAGTCCATCAAGAACAGCCTTCAAAGTCTTCAGGTTaGAGTTGTTTGTCAGTGCTCCTACAGAAAGGTATGGGAAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: EVYLVHQEQPSKSSG*SCLSVLLQKGMGRA Trigger: GGCCCTTCCCATACCTTTCTGTAGGAGCACTGACAAACAACTGCAACCTGAAGACTTTGAAGGCTGTTCTTGATGGACTAGATATACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS GCA 90 bp | AAGTCTTCAGCTTCATGGGATCCAGGCCATATCCCACAAAAGTCATaGTGTTCATCTCTCCATTTGAGTACTCTGAGTTTGCACCTACTG | + |
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Preference number: 5 (lower is better) Translates to: KSSASWDPGHIPQKS*CSSLHLSTLSLHLL Trigger: CAGTAGGTGCAAACTCAGAGTACTCAAATGGAGAGATGAACAGCATGACTTTTGTGGGATATGGCCTGGATCCCATGAAGCTGAAGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS GCA 90 bp | CTCAATTCTTTCTTTACCCCACAGTCAGGGTTGTTCTGCACGGGATaGTTCTGTGTCATTAACTCTGGTAAGTCTTCAGCTTCATGGGAT | + |
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Preference number: 5 (lower is better) Translates to: LNSFFTPQSGLFCTG*FCVINSGKSSASWD Trigger: ATCCCATGAAGCTGAAGACTTACCAGAGTTAATGACACAGAAGCATCCCGTGCAGAACAACCCTGACTGTGGGGTAAAGAAAGAATTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS GCA 90 bp | GTTGTTACCCTCAATTCTTTCTTTACCCCACAGTCAGGGTTGTTCTaGACGGGATGCTTCTGTGTCATTAACTCTGGTAAGTCTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: VVTLNSFFTPQSGLF*TGCFCVINSGKSSA Trigger: AGCTGAAGACTTACCAGAGTTAATGACACAGAAGCATCCCGTGCAGAACAACCCTGACTGTGGGGTAAAGAAAGAATTGAGGGTAACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CCA 90 bp | AGTCTTCAGGTTGCAGTTGTTTGTCAGTGCTCCTACAGAAAGGTATaGGAAGGGCCACATAGGTATCATGGCCTTCAAGATCTTTGTATG | + |
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Preference number: 5 (lower is better) Translates to: SLQVAVVCQCSYRKV*EGPHRYHGLQDLCM Trigger: CATACAAAGATCTTGAAGGCCATGATACCTATGTGGCCCTTCCCATACCTTTCTGTAGGAGCACTGACAAACAACTGCAACCTGAAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CAA 90 bp | CAGTCAACAAAGGAGAACAATATCCTCATGGAAGTTTGCCTCTATTGTAACATATCAGTAGCCTCTGTCTaGCCAGTTTCACCAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: QSTKENNILMEVCLYCNISVASV*PVSPGW Trigger: CCACCCTGGTGAAACTGGCAAGACAGAGGCTACTGA...TATGTTACAATAGAGGCAAACTTCCATGAGGATATTGTTCTCCTTTGTTGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS TCA 90 bp | TATGGGAAGGGCCACATAGGTATCATGGCCTTCAAGATCTTTGTATaGCCATTAATGAAGGCCTCCTCAAATATCACTGGGAACAGCATA | + |
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Preference number: 5 (lower is better) Translates to: YGKGHIGIMAFKIFV*PLMKASSNITGNSI Trigger: TATGCTGTTCCCAGTGATATTTGAGGAGGCCTTCATTAATGGTCATACAAAGATCTTGAAGGCCATGATACCTATGTGGCCCTTCCCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CAA 90 bp | CAACAAAGGAGAACAATATCCTCATGGAAGTTTGCCTCTATTGTAACATACTCATCCTTGGGCTGTCTTTaGGCCCTGAGTATATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: QQRRTISSWKFASIVTYSSLGCL*ALSISR Trigger: CCTGGATATACTCAGGGCCAAAAGACAGCCCAAGGA...TGAGTATGTTACAATAGAGGCAAACTTCCATGAGGATATTGTTCTCCTTTGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CAA 90 bp | AGGAGAACAATATCCTCATGGAAGTTTGCCTCTATTGTAACATACTCAATCTACATATTTGGCAGGCCCTaGAGAGCAGAAATGACCAAA | + |
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Preference number: 5 (lower is better) Translates to: RRTISSWKFASIVTYSIYIFGRP*RAEMTK Trigger: TTTGGTCATTTCTGCTCTCAAGGGCCTGCCAAATAT...GTAGATTGAGTATGTTACAATAGAGGCAAACTTCCATGAGGATATTGTTCTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS TCA 90 bp | ACATCATTTACACAGAGTTTCTGGAGACAGGGAAATGTGGGAAGTTaGGAAACCAATGTGATCATTTCTTCCTCACACATTTCAGAATCA | + |
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Preference number: 5 (lower is better) Translates to: TSFTQSFWRQGNVGS*ETNVIISSSHISES Trigger: TGATTCTGAAATGTGTGAGGAAGAAATGATCACATTGGTTTCTCAACTTCCCACATTTCCCTGTCTCCAGAAACTCTGTGTAAATGATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CAA 90 bp | ATCCTAGAGAATAAAAGCATGCTTGACACTTCTTGCAGATGGTACATTCATTCATTCAAAGTCTTCAGGTaGCAGTTGTTTGTCAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: ILENKSMLDTSCRWYIHSFKVFR*QLFVSA Trigger: AGCACTGACAAACAACTGCAACCTGAAGACTTTGAA...TGAATGAATGTACCATCTGCAAGAAGTGTCAAGCATGCTTTTATTCTCTAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CAA 90 bp | TCAACAAAGGAGAACAATATCCTCATGGAAGTTTGCCTCTATTGTAACATACTCTGTTCATCTCTCCATTaGAGTACTCTGAGTTTGCAC | + |
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Preference number: 5 (lower is better) Translates to: STKENNILMEVCLYCNILCSSLH*STLSLH Trigger: GTGCAAACTCAGAGTACTCAAATGGAGAGATGAACA...GAGTATGTTACAATAGAGGCAAACTTCCATGAGGATATTGTTCTCCTTTGTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS-3UTR CAA 90 bp | AGGAGAACAATATCCTCATGGAAGTTTGCCTCTATTGTAACATACTCAATCTACTTCCAAAGAGAAACGTaGGGTCTTTGGATCATAAAC | + |
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Preference number: 5 (lower is better) Translates to: RRTISSWKFASIVTYSIYFQRET*GLWIIN Trigger: GTTTATGATCCAAAGACCCAACGTTTCTCTTTGGAA...GTAGATTGAGTATGTTACAATAGAGGCAAACTTCCATGAGGATATTGTTCTCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS TCA 90 bp | GAGAATACAGCTCCAGCTCCTGTATACAATCTGCATTTACAATTTTaGAGATTTCTATCACTGTGTCTTTGGTTAAGGTTTCAATTACCA | + |
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Preference number: 5 (lower is better) Translates to: ENTAPAPVYNLHLQF*RFLSLCLWLRFQLP Trigger: TGGTAATTGAAACCTTAACCAAAGACACAGTGATAGAAATCTTCAAAATTGTAAATGCAGATTGTATACAGGAGCTGGAGCTGTATTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CAA 90 bp | AAGGCCTCCTCAAATATCACTGGGAACAGCATATTTGGCAGGCCCTaGAGAGCAGAAATGACCAAAGCCTCCTCCCTCAGTAGCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: KASSNITGNSIFGRP*RAEMTKASSLSSLC Trigger: ACAGAGGCTACTGAGGGAGGAGGCTTTGGTCATTTCTGCTCTCAAGGGCCTGCCAAATATGCTGTTCCCAGTGATATTTGAGGAGGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CCA 72 bp | GAAGGCCTCCTCAAATATCACTGGGAACAGCATATTTaGCAGGCCCTTGAGAGCAGAAATGACCAAAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: EGLLKYHWEQHI*QALESRNDQSL Trigger: GAGGCTTTGGTCATTTCTGCTCTCAAGGGCCTGCCAAATATGCTGTTCCCAGTGATATTTGAGGAGGCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS GCA 72 bp | AGCCTTCAAAGTCTTCAGGTTGCAGTTGTTTGTCAGTaGTCCTACAGAAAGGTATGGGAAGGGCCACATAGG | + |
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Preference number: 6 (lower is better) Translates to: SLQSLQVAVVCQ*SYRKVWEGPHR Trigger: CCTATGTGGCCCTTCCCATACCTTTCTGTAGGAGCACTGACAAACAACTGCAACCTGAAGACTTTGAAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CAA 72 bp | TCAAATATCACTGGGAACAGCATATTTGGCAGGCCCTaGAGAGCAGAAATGACCAAAGCCTCCTCCCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SNITGNSIFGRP*RAEMTKASSLS Trigger: ACTGAGGGAGGAGGCTTTGGTCATTTCTGCTCTCAAGGGCCTGCCAAATATGCTGTTCCCAGTGATATTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CAA 72 bp | CAAGAACAGCCTTCAAAGTCTTCAGGTTGCAGTTGTTaGTCAGTGCTCCTACAGAAAGGTATGGGAAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: QEQPSKSSGCSC*SVLLQKGMGRA Trigger: GGCCCTTCCCATACCTTTCTGTAGGAGCACTGACAAACAACTGCAACCTGAAGACTTTGAAGGCTGTTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CCA 72 bp | GTTGCAGTTGTTTGTCAGTGCTCCTACAGAAAGGTATaGGAAGGGCCACATAGGTATCATGGCCTTCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: VAVVCQCSYRKV*EGPHRYHGLQD Trigger: ATCTTGAAGGCCATGATACCTATGTGGCCCTTCCCATACCTTTCTGTAGGAGCACTGACAAACAACTGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS TCA 72 bp | GTTAAGGTTTCAATTACCAGCTTTCTGCAGAGTAGGTaGATGGAATCTTTTCTCTGCTGGGCCCACTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: VKVSITSFLQSR*MESFLCWAHSN Trigger: GTTGGAGTGGGCCCAGCAGAGAAAAGATTCCATTCACCTACTCTGCAGAAAGCTGGTAATTGAAACCTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS GCA 72 bp | GCTTCATGGGATCCAGGCCATATCCCACAAAAGTCATaGTGTTCATCTCTCCATTTGAGTACTCTGAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: ASWDPGHIPQKS*CSSLHLSTLSL Trigger: CAAACTCAGAGTACTCAAATGGAGAGATGAACAGCATGACTTTTGTGGGATATGGCCTGGATCCCATGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS GCA 72 bp | CTCAATTCTTTCTTTACCCCACAGTCAGGGTTGTTCTaGACGGGATGCTTCTGTGTCATTAACTCTGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: LNSFFTPQSGLF*TGCFCVINSGK Trigger: CTTACCAGAGTTAATGACACAGAAGCATCCCGTGCAGAACAACCCTGACTGTGGGGTAAAGAAAGAATTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CCA 72 bp | TGTATGACCATTAATGAAGGCCTCCTCAAATATCACTaGGAACAGCATATTTGGCAGGCCCTTGAGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: CMTINEGLLKYH*EQHIWQALESR Trigger: TCTGCTCTCAAGGGCCTGCCAAATATGCTGTTCCCAGTGATATTTGAGGAGGCCTTCATTAATGGTCATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CCA 72 bp | AGGTTTCAATTACCAGCTTTCTGCAGAGTAGGTGAATaGAATCTTTTCTCTGCTGGGCCCACTCCAACAAGT | + |
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Preference number: 6 (lower is better) Translates to: RFQLPAFCRVGE*NLFSAGPTPTS Trigger: ACTTGTTGGAGTGGGCCCAGCAGAGAAAAGATTCCATTCACCTACTCTGCAGAAAGCTGGTAATTGAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CAA 72 bp | CCATCAAGAACAGCCTTCAAAGTCTTCAGGTTGCAGTaGTTTGTCAGTGCTCCTACAGAAAGGTATGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PSRTAFKVFRLQ*FVSAPTERYGK Trigger: CTTCCCATACCTTTCTGTAGGAGCACTGACAAACAACTGCAACCTGAAGACTTTGAAGGCTGTTCTTGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CAA 72 bp | CATATCCCACAAAAGTCATGCTGTTCATCTCTCCATTaGAGTACTCTGAGTTTGCACCTACTGGAGCGAACC | + |
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Preference number: 6 (lower is better) Translates to: HIPQKSCCSSLH*STLSLHLLERT Trigger: GGTTCGCTCCAGTAGGTGCAAACTCAGAGTACTCAAATGGAGAGATGAACAGCATGACTTTTGTGGGATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CAA 90 bp | ATATCTAGTCCATCAAGAACAGCCTTCAAAGTCTTCAGGTTGCAGTaGTTTGTCAGTGCTCCTACAGAAAGGTATGGGAAGGGCCACATA | + |
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Preference number: 6 (lower is better) Translates to: ISSPSRTAFKVFRLQ*FVSAPTERYGKGHI Trigger: TATGTGGCCCTTCCCATACCTTTCTGTAGGAGCACTGACAAACAACTGCAACCTGAAGACTTTGAAGGCTGTTCTTGATGGACTAGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CAA 90 bp | AGAAGTATATCTAGTCCATCAAGAACAGCCTTCAAAGTCTTCAGGTaGCAGTTGTTTGTCAGTGCTCCTACAGAAAGGTATGGGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: RSISSPSRTAFKVFR*QLFVSAPTERYGKG Trigger: GCCCTTCCCATACCTTTCTGTAGGAGCACTGACAAACAACTGCAACCTGAAGACTTTGAAGGCTGTTCTTGATGGACTAGATATACTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CCA 72 bp | TTCTGTGTCATTAACTCTGGTAAGTCTTCAGCTTCATaGGATCCAGGCCATATCCCACAAAAGTCATGCTGT | + |
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Preference number: 6 (lower is better) Translates to: FCVINSGKSSAS*DPGHIPQKSCC Trigger: ACAGCATGACTTTTGTGGGATATGGCCTGGATCCCATGAAGCTGAAGACTTACCAGAGTTAATGACACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CAA 90 bp | TATCTACCACATTTAGAACATGGGTTTGTAACAAAGGCAATATCCTaGGGCTGTCTTTTGGCCCTGAGTATATCCAGGAGTTCGGGACAA | + |
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Preference number: 6 (lower is better) Translates to: YLPHLEHGFVTKAIS*GCLLALSISRSSGQ Trigger: TTGTCCCGAACTCCTGGATATACTCAGGGCCAAAAGACAGCCCAAGGATATTGCCTTTGTTACAAACCCATGTTCTAAATGTGGTAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS GCA 72 bp | CTGTGTCTTTGGTTAAGGTTTCAATTACCAGCTTTCTaGAGAGTAGGTGAATGGAATCTTTTCTCTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LCLWLRFQLPAF*RVGEWNLFSAG Trigger: CCCAGCAGAGAAAAGATTCCATTCACCTACTCTGCAGAAAGCTGGTAATTGAAACCTTAACCAAAGACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CAA 72 bp | TCTAGTCCATCAAGAACAGCCTTCAAAGTCTTCAGGTaGCAGTTGTTTGTCAGTGCTCCTACAGAAAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: SSPSRTAFKVFR*QLFVSAPTERY Trigger: ATACCTTTCTGTAGGAGCACTGACAAACAACTGCAACCTGAAGACTTTGAAGGCTGTTCTTGATGGACTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CAA 72 bp | CATTTAGAACATGGGTTTGTAACAAAGGCAATATCCTaGGGCTGTCTTTTGGCCCTGAGTATATCCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: HLEHGFVTKAIS*GCLLALSISRS Trigger: ACTCCTGGATATACTCAGGGCCAAAAGACAGCCCAAGGATATTGCCTTTGTTACAAACCCATGTTCTAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS TCA 72 bp | ACAAGTATGTGGCAGAATCATCAAGTCTGCCCTTCATaGCAGAGAGTTCAGTTGTTACCCTCAATTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: TSMWQNHQVCPS*QRVQLLPSILS Trigger: AGAAAGAATTGAGGGTAACAACTGAACTCTCTGTCATGAAGGGCAGACTTGATGATTCTGCCACATACTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS TCA 72 bp | ATTTCAGAATCACCCATACTGAGGGAATCTGTGACGTaGTCAAGTGTGAGTTCAAGAAGATTGTCCATCTGT | + |
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Preference number: 6 (lower is better) Translates to: ISESPILRESVT*SSVSSRRLSIC Trigger: ACAGATGGACAATCTTCTTGAACTCACACTTGATCACGTCACAGATTCCCTCAGTATGGGTGATTCTGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CAA 90 bp | TTAGAACATGGGTTTGTAACAAAGGCAATATCCTTGGGCTGTCTTTaGGCCCTGAGTATATCCAGGAGTTCGGGACAAAATTGTTCTAAT | + |
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Preference number: 6 (lower is better) Translates to: LEHGFVTKAISLGCL*ALSISRSSGQNCSN Trigger: ATTAGAACAATTTTGTCCCGAACTCCTGGATATACTCAGGGCCAAAAGACAGCCCAAGGATATTGCCTTTGTTACAAACCCATGTTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CCA 72 bp | CAGGGTTGTGTCTTCCAAAGAGAAACGTTGGGTCTTTaGATCATAAACATAGTATCTACCACATTTAGAACA | + |
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Preference number: 6 (lower is better) Translates to: QGCVFQRETLGL*IINIVSTTFRT Trigger: TGTTCTAAATGTGGTAGATACTATGTTTATGATCCAAAGACCCAACGTTTCTCTTTGGAAGACACAACCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS GCA 72 bp | GCAAAGAGAATACAGCTCCAGCTCCTGTATACAATCTaGATTTACAATTTTGAAGATTTCTATCACTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: AKRIQLQLLYTI*IYNFEDFYHCV Trigger: GACACAGTGATAGAAATCTTCAAAATTGTAAATGCAGATTGTATACAGGAGCTGGAGCTGTATTCTCTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CCA 72 bp | TGGATCATAAACATAGTATCTACCACATTTAGAACATaGGTTTGTAACAAAGGCAATATCCTTGGGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: WIINIVSTTFRT*VCNKGNILGLS Trigger: AGACAGCCCAAGGATATTGCCTTTGTTACAAACCCATGTTCTAAATGTGGTAGATACTATGTTTATGATCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS CAA 72 bp | AGCTCCAGCTCCTGTATACAATCTGCATTTACAATTTaGAAGATTTCTATCACTGTGTCTTTGGTTAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: SSSSCIQSAFTI*KISITVSLVKV Trigger: AACCTTAACCAAAGACACAGTGATAGAAATCTTCAAAATTGTAAATGCAGATTGTATACAGGAGCTGGAGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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| CDS TCA 72 bp | CTCTCAAGGAGAAACCCGAGAGGATCAAGGCATAAATaGTTTAAAGGTATATCAATAAGGTACAAACATTTT | + |
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Preference number: 6 (lower is better) Translates to: LSRRNPRGSRHK*FKGISIRYKHF Trigger: AAAATGTTTGTACCTTATTGATATACCTTTAAATCATTTATGCCTTGATCCTCTCGGGTTTCTCCTTGAGAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050933.9 |
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