Pregenerated sensors for OOG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096576Ensembl transcript IDs: ENSMUST00000095509.6, ENSMUST00000222112.2, ENSMUST00000222332.2
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATAGGGCAGGCAATCCAAGTCTGACTGTGAGAGGTCACAGTTACTaGTGCAAAGTGTCTCCAAGGGCTTTTTCAGGCACCTGGGTAGAG | + |
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Preference number: 1 (lower is better) Translates to: NRAGNPSLTVRGHSY*CKVSPRAFSGTWVE Trigger: CTCTACCCAGGTGCCTGAAAAAGCCCTTGGAGACACTTTGCATCAGTAACTGTGACCTCTCACAGTCAGACTTGGATTGCCTGCCCTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR GCA 90 bp | TGGCTACACTTTGAGGTCAATTCTAGGATACGGCCTTGTGTTATCTaGTCTCACAACTCACAGTATTCTAGTCTGAGGTCTGTAGTTATC | + |
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Preference number: 1 (lower is better) Translates to: WLHFEVNSRIRPCVI*SHNSQYSSLRSVVI Trigger: GATAACTACAGACCTCAGACTAGAATACTGTGAGTTGTGAGAGCAGATAACACAAGGCCGTATCCTAGAATTGACCTCAAAGTGTAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR TCA 90 bp | CTCAGAAGTTTTATTCCTCCAAAGGCCATGATCCTGTCTTCATCTTaGAACCCAGTGTTGCATATAGCTCATCTGCTAAACCTGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LRSFIPPKAMILSSS*NPVLHIAHLLNLFL Trigger: CAGAAACAGGTTTAGCAGATGAGCTATATGCAACACTGGGTTTCAAGATGAAGACAGGATCATGGCCTTTGGAGGAATAAAACTTCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR TCA 90 bp | GAGGAAGTTATTGACTTTCCTGTGTATCTCAGACTTTTAGGTGATTaGCATTTTCATGCTCCATTTAGCAGTGGACATTCACTTAGGATT | + |
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Preference number: 1 (lower is better) Translates to: EEVIDFPVYLRLLGD*HFHAPFSSGHSLRI Trigger: AATCCTAAGTGAATGTCCACTGCTAAATGGAGCATGAAAATGTCAATCACCTAAAAGTCTGAGATACACAGGAAAGTCAATAACTTCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| 3UTR CCA 90 bp | CAGATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATaGTGCTTCTATTGTAACACATTCAAACTACAAGTGCTTGATACT | + |
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Preference number: 1 (lower is better) Translates to: QIYCMQSTDWASLIK*CFYCNTFKLQVLDT Trigger: AGTATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| 3UTR GCA 90 bp | ATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTaGTTCTATTGTAACACATTCAAACTACAAGTGCTTGATACTTTC | + |
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Preference number: 1 (lower is better) Translates to: IYCMQSTDWASLIKW*FYCNTFKLQVLDTF Trigger: GAAAGTATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| 3UTR CAA 90 bp | CCGATCATAAATGTAGCACCCACCACATTTAGAGCATTTGGTTGTTaGAAAGGAGACACTATGGAGCTGTCTTTTGGCTCTCAGTATATC | + |
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Preference number: 2 (lower is better) Translates to: PIINVAPTTFRAFGC*KGDTMELSFGSQYI Trigger: GATATACTGAGAGCCAAAAGACAGCTCCATAGTGTCTCCTTTCAAACAACCAAATGCTCTAAATGTGGTGGGTGCTACATTTATGATCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR CAA 90 bp | TCTCAGAAGTTTTATTCCTCCAAAGGCCATGATCCTGTCTTCATCTaGAAACCCAGTGTTGCATATAGCTCATCTGCTAAACCTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: SQKFYSSKGHDPVFI*KPSVAYSSSAKPVS Trigger: AGAAACAGGTTTAGCAGATGAGCTATATGCAACACTGGGTTTCAAGATGAAGACAGGATCATGGCCTTTGGAGGAATAAAACTTCTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR-3UTR TCA 90 bp | TATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATTGTTCTCAGACTTTTAGGTaGTTGACATTTTCATGCTCC | + |
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Preference number: 2 (lower is better) Translates to: YCMQSTDWASLIKWCFYCSQTFR*LTFSCS Trigger: GGAGCATGAAAATGTCAATCACCTAAAAGTCTGAGA...ACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| 3UTR-3UTR TCA 90 bp | GATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATCTCAGACTTTTAGGTaGTTGACATTTTCATGCTCC | + |
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Preference number: 2 (lower is better) Translates to: DLLYAVNRLGQSHKMVLLSQTFR*LTFSCS Trigger: GGAGCATGAAAATGTCAATCACCTAAAAGTCTGAGA...TAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| 3UTR-3UTR TCA 90 bp | TCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATTGTAACACATTCAAACTCAGAGGAAGTTATTaGCTTTCCTGTGTATCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: STDWASLIKWCFYCNTFKLRGSY*LSCVSQ Trigger: CTGAGATACACAGGAAAGTCAATAACTTCCTCTGAG...TTTGAATGTGTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATTGTAACACATTCAAACTACTCAGAGGAAGTTATTaGCTTTCCTGTGTATCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TDWASLIKWCFYCNTFKLLRGSY*LSCVSQ Trigger: CTGAGATACACAGGAAAGTCAATAACTTCCTCTGAG...TAGTTTGAATGTGTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGCATGTAGGAAGAACTACCTACCTCAAACAAAGTTTAACAACTACTAGGATCCTGTCTTCATCTTaGAACCCAGTGTTGCATATA | + |
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Preference number: 2 (lower is better) Translates to: MVHVGRTTYLKQSLTTTRILSSS*NPVLHI Trigger: TATATGCAACACTGGGTTTCAAGATGAAGACAGGAT...CCTAGTAGTTGTTAAACTTTGTTTGAGGTAGGTAGTTCTTCCTACATGCACCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAAGCTCAGGACAAAAACTTTCTAATCTGTGTGTTAGTATTACACCACTGTGATACTTTCTACAGATaGAACATCCATTCACCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PEAQDKNFLICVLVLHHCDTFYR*NIHSPA Trigger: AGCTGGTGAATGGATGTTGCATCTGTAGAAAGTATC...ACAGTGGTGTAATACTAACACACAGATTAGAAAGTTTTTGTCCTGAGCTTCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCTATTGTAACACATTCAAACTACAAGTGCTTGATACTTTCTACAGATGCGTGATGTGTTTTCTCTaGTCTTACTGGACCCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: CFYCNTFKLQVLDTFYRCVMCFL*SYWTLS Trigger: TGAGAGGGTCCAGTAAGACCAGAGAAAACACATCAC...GCATCTGTAGAAAGTATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR-3UTR TCA 90 bp | TATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATTGTCAAACTACAAGTGCTTaGTACTTTCTACAGATGCAA | + |
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Preference number: 2 (lower is better) Translates to: YCMQSTDWASLIKWCFYCQTTSA*YFLQMQ Trigger: TTGCATCTGTAGAAAGTATCAAGCACTTGTAGTTTG...ACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGCTTCTATTGTAACACATTCAAACTACAAGTGCTTGATACTTTCTACAGATTCTCAGACTTTTAGGTaGTTGACATTTTCATGCTCC | + |
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Preference number: 2 (lower is better) Translates to: GASIVTHSNYKCLILSTDSQTFR*LTFSCS Trigger: GGAGCATGAAAATGTCAATCACCTAAAAGTCTGAGA...ATCTGTAGAAAGTATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGCACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATTGTAACACATTCAAACTAAACAGATTTATTGTATaGAGTCAACAGATTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: TDWASLIKWCFYCNTFKLNRFIV*SQQIGP Trigger: TGGCCCAATCTGTTGACTGCATACAATAAATCTGTT...TAGTTTGAATGTGTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCTATTGTAACACATTCAAACTACAAGTGCTTGATACTTTCTACAGATGCCAAACTACAAGTGCTTaGTACTTTCTACAGATGCAA | + |
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Preference number: 2 (lower is better) Translates to: CFYCNTFKLQVLDTFYRCQTTSA*YFLQMQ Trigger: TTGCATCTGTAGAAAGTATCAAGCACTTGTAGTTTG...GCATCTGTAGAAAGTATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| 3UTR CCA 72 bp | ACAGCTAAGCAGACGGCACTTCTCCCAAACTCATTGTaGCTACACTTTGAGGTCAATTCTAGGATACGGCCT | + |
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Preference number: 3 (lower is better) Translates to: TAKQTALLPNSL*LHFEVNSRIRP Trigger: AGGCCGTATCCTAGAATTGACCTCAAAGTGTAGCCACAATGAGTTTGGGAGAAGTGCCGTCTGCTTAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR CCA 72 bp | AGGTATGATTCAGGGCATGGCTGGAAAACACAGCAATaGATATATCAGGCCAACATGGTGCATGTAGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: RYDSGHGWKTQQ*IYQANMVHVGR Trigger: TCTTCCTACATGCACCATGTTGGCCTGATATATCCATTGCTGTGTTTTCCAGCCATGCCCTGAATCATACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR TCA 72 bp | CAGCAAGGCACTGAACTGAAAGTCCACTATACAACATaGATCCAATTCCAGGGTTTTCAGGGTATCTCCAAC | + |
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Preference number: 3 (lower is better) Translates to: QQGTELKVHYTT*IQFQGFQGISN Trigger: GTTGGAGATACCCTGAAAACCCTGGAATTGGATTCATGTTGTATAGTGGACTTTCAGTTCAGTGCCTTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR CCA 72 bp | TGGTTGTTTGAAAGGAGACACTATGGAGCTGTCTTTTaGCTCTCAGTATATCCAGAAGCTCAGGACAAAAAC | + |
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Preference number: 3 (lower is better) Translates to: WLFERRHYGAVF*LSVYPEAQDKN Trigger: GTTTTTGTCCTGAGCTTCTGGATATACTGAGAGCCAAAAGACAGCTCCATAGTGTCTCCTTTCAAACAACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR TCA 72 bp | GCTAAACCTGTTTCTGAACTCAAAACCTTTCACACATaGGCGATAAGAGGCATGCTTATGCCTCATCATACA | + |
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Preference number: 3 (lower is better) Translates to: AKPVSELKTFHT*AIRGMLMPHHT Trigger: TGTATGATGAGGCATAAGCATGCCTCTTATCGCTCATGTGTGAAAGGTTTTGAGTTCAGAAACAGGTTTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR TCA 72 bp | TTTATTCCTCCAAAGGCCATGATCCTGTCTTCATCTTaGAACCCAGTGTTGCATATAGCTCATCTGCTAAAC | + |
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Preference number: 3 (lower is better) Translates to: FIPPKAMILSSS*NPVLHIAHLLN Trigger: GTTTAGCAGATGAGCTATATGCAACACTGGGTTTCAAGATGAAGACAGGATCATGGCCTTTGGAGGAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR-3UTR CAA 90 bp | CAGATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCGCTCAGAGGAAGTTATaGACTTTCCTGTGTATCTCA | + |
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Preference number: 3 (lower is better) Translates to: QIYCMQSTDWASLIKWCFAQRKL*TFLCIS Trigger: TGAGATACACAGGAAAGTCAATAACTTCCTCTGAGC...GAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATTGTAACACATTCAAACTAGCTCAGAGGAAGTTATaGACTTTCCTGTGTATCTCA | + |
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Preference number: 3 (lower is better) Translates to: TDWASLIKWCFYCNTFKLAQRKL*TFLCIS Trigger: TGAGATACACAGGAAAGTCAATAACTTCCTCTGAGC...TAGTTTGAATGTGTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| 3UTR TCA 72 bp | TTTTTGACAAATGTTGTTGAAAAGGGTCGATATAATTaGCAGCTAAGCAGACGGCACTTCTCCCAAACTCAT | + |
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Preference number: 3 (lower is better) Translates to: FLTNVVEKGRYN*QLSRRHFSQTH Trigger: ATGAGTTTGGGAGAAGTGCCGTCTGCTTAGCTGTCAATTATATCGACCCTTTTCAACAACATTTGTCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR CCA 72 bp | AAAAGTCAACAGATTTATTGTATGCAGTCAACAGATTaGGCCAGTCTCATAAAATGGTGCTTCTATTGTAAC | + |
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Preference number: 3 (lower is better) Translates to: KSQQIYCMQSTD*ASLIKWCFYCN Trigger: GTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATCTGTTGACTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR CAA 72 bp | TTGACAGCTAAGCAGACGGCACTTCTCCCAAACTCATaGTGGCTACACTTTGAGGTCAATTCTAGGATACGG | + |
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Preference number: 4 (lower is better) Translates to: LTAKQTALLPNS*WLHFEVNSRIR Trigger: CCGTATCCTAGAATTGACCTCAAAGTGTAGCCACAATGAGTTTGGGAGAAGTGCCGTCTGCTTAGCTGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR CAA 72 bp | AGACGGCACTTCTCCCAAACTCATTGTGGCTACACTTaGAGGTCAATTCTAGGATACGGCCTTGTGTTATCT | + |
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Preference number: 4 (lower is better) Translates to: RRHFSQTHCGYT*RSILGYGLVLS Trigger: AGATAACACAAGGCCGTATCCTAGAATTGACCTCAAAGTGTAGCCACAATGAGTTTGGGAGAAGTGCCGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| CDS-3UTR CCA 90 bp | TTTCATGCTCCATTTAGCAGTGGACATTCACTTAGGATTTCATCAGTCCCCAATAGCACTGTTCTCAATTaGCTGCTTCTCTGTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: FHAPFSSGHSLRISSVPNSTVLN*LLLCPE Trigger: TTCAGGACAGAGAAGCAGCCAATTGAGAACAGTGCT...ATTGGGGACTGATGAAATCCTAAGTGAATGTCCACTGCTAAATGGAGCATGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 |
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| CDS-3UTR TCA 90 bp | CTCCATTTAGCAGTGGACATTCACTTAGGATTTCATCAGTCCCCAATACTAAGTGTCCACTATACAACATaGATCCAATTCCAGGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: LHLAVDIHLGFHQSPILSVHYTT*IQFQGF Trigger: AAAACCCTGGAATTGGATTCATGTTGTATAGTGGAC...ACTTAGTATTGGGGACTGATGAAATCCTAAGTGAATGTCCACTGCTAAATGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222332.2 |
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| CDS-3UTR CCA 90 bp | TACTTTCTACAGATGCAACATCCATTCACCAGCTCAGAGGAAGTTATTGACTTTAGAATCATCCTGATCTaGACAATGGAGACAGATCAC | + |
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Preference number: 4 (lower is better) Translates to: YFLQMQHPFTSSEEVIDFRIILI*TMETDH Trigger: GTGATCTGTCTCCATTGTCCAGATCAGGATGATTCT...AAAGTCAATAACTTCCTCTGAGCTGGTGAATGGATGTTGCATCTGTAGAAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 |
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| CDS-3UTR CCA 90 bp | TTGAAACCCAGTGTTGCATATAGCTCATCTGCTAAACCTGTTTCTGAACTCAAAAGAATCATCCTGATCTaGACAATGGAGACAGATCAC | + |
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Preference number: 4 (lower is better) Translates to: LKPSVAYSSSAKPVSELKRIILI*TMETDH Trigger: GTGATCTGTCTCCATTGTCCAGATCAGGATGATTCT...TTTGAGTTCAGAAACAGGTTTAGCAGATGAGCTATATGCAACACTGGGTTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| CDS-3UTR CCA 90 bp | AGAACTACCTACCTCAAACAAAGTTTAACAACTACTAGGGCTGTTGTTAAGAGTAGCACTGTTCTCAATTaGCTGCTTCTCTGTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: RTTYLKQSLTTTRAVVKSSTVLN*LLLCPE Trigger: TTCAGGACAGAGAAGCAGCCAATTGAGAACAGTGCT...ACTCTTAACAACAGCCCTAGTAGTTGTTAAACTTTGTTTGAGGTAGGTAGTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| 3UTR CAA 72 bp | GGTGCTTCTATTGTAACACATTCAAACTACAAGTGCTaGATACTTTCTACAGATGCAACATCCATTCACCAG | + |
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Preference number: 4 (lower is better) Translates to: GASIVTHSNYKC*ILSTDATSIHQ Trigger: CTGGTGAATGGATGTTGCATCTGTAGAAAGTATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGCACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| CDS-3UTR TCA 90 bp | GGACATTCACTTAGGATTTCATCAGTCCCCAATACTAAGTTTCTATTTCTCAGTGTCCACTATACAACATaGATCCAATTCCAGGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: GHSLRISSVPNTKFLFLSVHYTT*IQFQGF Trigger: AAAACCCTGGAATTGGATTCATGTTGTATAGTGGAC...ACTGAGAAATAGAAACTTAGTATTGGGGACTGATGAAATCCTAAGTGAATGTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222332.2 |
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| CDS-3UTR TCA 90 bp | TCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATTGTAACACATTCAAACTATATATCCATCAGTaGAGGCCTCCTCAAAAATTA | + |
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Preference number: 4 (lower is better) Translates to: STDWASLIKWCFYCNTFKLYIHQ*RPPQKL Trigger: TAATTTTTGAGGAGGCCTTCACTGATGGATATATAG...TTTGAATGTGTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 |
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| CDS-3UTR TCA 90 bp | GGTGCTTCTATTGTAACACATTCAAACTACAAGTGCTTGATACTTTCTACAGATCTATATATCCATCAGTaGAGGCCTCCTCAAAAATTA | + |
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Preference number: 4 (lower is better) Translates to: GASIVTHSNYKCLILSTDLYIHQ*RPPQKL Trigger: TAATTTTTGAGGAGGCCTTCACTGATGGATATATAG...ATCTGTAGAAAGTATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGCACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 |
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| CDS TCA 90 bp | TCACCTCACAGCCAGCACTGTTCTCAATTGGCTGCTTCTCTGTCCTaGAATCTGGTAAGCCTTCACCTTCATGGGATCCAGCCCATATCT | + |
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Preference number: 5 (lower is better) Translates to: SPHSQHCSQLAASLS*NLVSLHLHGIQPIS Trigger: AGATATGGGCTGGATCCCATGAAGGTGAAGGCTTACCAGATTTCAGGACAGAGAAGCAGCCAATTGAGAACAGTGCTGGCTGTGAGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 |
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| CDS-3UTR CAA 90 bp | AGCAGACGGCACTTCTCCCAAACTCATTGTGGCTACACTTTGAGGTCAATTCTATCAGTAGACTCTGAATaGCCAGGTTCTGGAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: SRRHFSQTHCGYTLRSILSVDSE*PGSGGW Trigger: CCACCCTCCAGAACCTGGCAATTCAGAGTCTACTGA...TAGAATTGACCTCAAAGTGTAGCCACAATGAGTTTGGGAGAAGTGCCGTCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| CDS TCA 90 bp | GAATTGCCAGGTTCTGGAGGGTGGGTGGGGAATAGCATTCCTCTGTaGCTTCTTCTAAAGAATCATCCTGATCTGGACAATGGAGACAGA | + |
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Preference number: 5 (lower is better) Translates to: ELPGSGGWVGNSIPL*LLLKNHPDLDNGDR Trigger: TCTGTCTCCATTGTCCAGATCAGGATGATTCTTTAGAAGAAGTCACAGAGGAATGCTATTCCCCACCCACCCTCCAGAACCTGGCAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 |
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| CDS-3UTR CAA 90 bp | TCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATTGTAACACATTCAAATCAGTAGACTCTGAATaGCCAGGTTCTGGAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: STDWASLIKWCFYCNTFKSVDSE*PGSGGW Trigger: CCACCCTCCAGAACCTGGCAATTCAGAGTCTACTGA...TTTGAATGTGTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 |
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| CDS-3UTR CAA 90 bp | CAGATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCCTATGGAGCTGTCTTTaGGCTCTCAGTATATCCAGA | + |
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Preference number: 5 (lower is better) Translates to: QIYCMQSTDWASLIKWCFLWSCL*ALSISR Trigger: TCTGGATATACTGAGAGCCAAAAGACAGCTCCATAG...GAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222332.2 |
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| CDS-3UTR CAA 90 bp | CAAAACCTTTCACACATGAGCGATAAGAGGCATGCTTATGCCTCATCATACATAGTGGAGTGTGGGAAGTaGAGAAATCAAGCTGAATAT | + |
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Preference number: 5 (lower is better) Translates to: QNLSHMSDKRHAYASSYIVECGK*RNQAEY Trigger: ATATTCAGCTTGATTTCTCAACTTCCCACACTCCAC...TATGTATGATGAGGCATAAGCATGCCTCTTATCGCTCATGTGTGAAAGGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222112.2 |
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| CDS-3UTR CAA 90 bp | CAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATTGTAACACATTCGTGGAGTGTGGGAAGTaGAGAAATCAAGCTGAATAT | + |
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Preference number: 5 (lower is better) Translates to: QSTDWASLIKWCFYCNTFVECGK*RNQAEY Trigger: ATATTCAGCTTGATTTCTCAACTTCCCACACTCCAC...GAATGTGTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| CDS-3UTR CAA 90 bp | GATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTACTATGGAGCTGTCTTTaGGCTCTCAGTATATCCAGA | + |
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Preference number: 5 (lower is better) Translates to: DLLYAVNRLGQSHKMVLLLWSCL*ALSISR Trigger: TCTGGATATACTGAGAGCCAAAAGACAGCTCCATAG...TAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222332.2 |
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| CDS-3UTR CAA 90 bp | CAGATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCAGAGCATTTGGTTGTTaGAAAGGAGACACTATGGAG | + |
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Preference number: 5 (lower is better) Translates to: QIYCMQSTDWASLIKWCFRAFGC*KGDTME Trigger: CTCCATAGTGTCTCCTTTCAAACAACCAAATGCTCT...GAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222332.2 |
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| CDS-3UTR CAA 90 bp | CAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATTGTAACACATTCTCTGCGTGTACAGTTTaGAAGATTTCTATCACTGAG | + |
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Preference number: 5 (lower is better) Translates to: QSTDWASLIKWCFYCNTFSACTV*KISITE Trigger: CTCAGTGATAGAAATCTTCAAAACTGTACACGCAGA...GAATGTGTTACAATAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| CDS-3UTR CAA 90 bp | GATTTATTGTATGCAGTCAACAGATTGGGCCAGTCTCATAAAATGGTGCTTCTATCTGCGTGTACAGTTTaGAAGATTTCTATCACTGAG | + |
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Preference number: 5 (lower is better) Translates to: DLLYAVNRLGQSHKMVLLSACTV*KISITE Trigger: CTCAGTGATAGAAATCTTCAAAACTGTACACGCAGA...TAGAAGCACCATTTTATGAGACTGGCCCAATCTGTTGACTGCATACAATAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| CDS-3UTR CAA 90 bp | TGGTGCTTCTATTGTAACACATTCAAACTACAAGTGCTTGATACTTTCTACAGAGTGGAGTGTGGGAAGTaGAGAAATCAAGCTGAATAT | + |
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Preference number: 5 (lower is better) Translates to: WCFYCNTFKLQVLDTFYRVECGK*RNQAEY Trigger: ATATTCAGCTTGATTTCTCAACTTCCCACACTCCAC...TCTGTAGAAAGTATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGCACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| CDS-3UTR CAA 90 bp | TGGTGCTTCTATTGTAACACATTCAAACTACAAGTGCTTGATACTTTCTACAGAAGAGCATTTGGTTGTTaGAAAGGAGACACTATGGAG | + |
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Preference number: 5 (lower is better) Translates to: WCFYCNTFKLQVLDTFYRRAFGC*KGDTME Trigger: CTCCATAGTGTCTCCTTTCAAACAACCAAATGCTCT...TCTGTAGAAAGTATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGCACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222332.2 |
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| CDS-3UTR CAA 90 bp | GGTGCTTCTATTGTAACACATTCAAACTACAAGTGCTTGATACTTTCTACAGATTCTGCGTGTACAGTTTaGAAGATTTCTATCACTGAG | + |
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Preference number: 5 (lower is better) Translates to: GASIVTHSNYKCLILSTDSACTV*KISITE Trigger: CTCAGTGATAGAAATCTTCAAAACTGTACACGCAGA...ATCTGTAGAAAGTATCAAGCACTTGTAGTTTGAATGTGTTACAATAGAAGCACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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| CDS CCA 72 bp | GTGAAGGCCTCCTCAAAAATTACTGGGAACAGACTCTaGGGCAGGTCCGTGAGAGCAGAAATGGCCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VKASSKITGNRL*GRSVRAEMAKA Trigger: GGCCTTGGCCATTTCTGCTCTCACGGACCTGCCCCAGAGTCTGTTCCCAGTAATTTTTGAGGAGGCCTTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 |
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| CDS TCA 72 bp | AGCCAGCACTGTTCTCAATTGGCTGCTTCTCTGTCCTaGAATCTGGTAAGCCTTCACCTTCATGGGATCCAG | + |
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Preference number: 6 (lower is better) Translates to: SQHCSQLAASLS*NLVSLHLHGIQ Trigger: CTGGATCCCATGAAGGTGAAGGCTTACCAGATTTCAGGACAGAGAAGCAGCCAATTGAGAACAGTGCTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 |
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| CDS GCA 72 bp | TTCTTCACCTCACAGCCAGCACTGTTCTCAATTGGCTaGTTCTCTGTCCTGAAATCTGGTAAGCCTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: FFTSQPALFSIG*FSVLKSGKPSP Trigger: AGGTGAAGGCTTACCAGATTTCAGGACAGAGAAGCAGCCAATTGAGAACAGTGCTGGCTGTGAGGTGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 |
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| CDS CCA 72 bp | TATATATCCATCAGTGAAGGCCTCCTCAAAAATTACTaGGAACAGACTCTGGGGCAGGTCCGTGAGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: YISISEGLLKNY*EQTLGQVRESR Trigger: TCTGCTCTCACGGACCTGCCCCAGAGTCTGTTCCCAGTAATTTTTGAGGAGGCCTTCACTGATGGATATATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 |
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| CDS TCA 72 bp | GTATCATGGCCTTCAAGATCCCTATATATCCATCAGTaGAGGCCTCCTCAAAAATTACTGGGAACAGACTCT | + |
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Preference number: 6 (lower is better) Translates to: VSWPSRSLYIHQ*RPPQKLLGTDS Trigger: AGAGTCTGTTCCCAGTAATTTTTGAGGAGGCCTTCACTGATGGATATATAGGGATCTTGAAGGCCATGATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 |
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| CDS CAA 90 bp | GACATCATTTACATAGAGTTTCTGGAGACAGTGGAGTGTGGGAAGTaGAGAAATCAAGCTGAATATTGTCTCCTCATCAAGCTTTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: DIIYIEFLETVECGK*RNQAEYCLLIKLFR Trigger: TCTGAAAAGCTTGATGAGGAGACAATATTCAGCTTGATTTCTCAACTTCCCACACTCCACTGTCTCCAGAAACTCTATGTAAATGATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095509.6 ENSMUST00000222112.2 ENSMUST00000222332.2 |
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