Pregenerated sensors for ONECUT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045518Ensembl transcript IDs: ENSMUST00000051773.9
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCATGTTGTGAGTCTTAGTCTGCTGGCTCATAGGACATGTCACTaGACCTGCTGGGTACAGGGTGGGCAGGGTGGCTTTGGAGCTAGG | + |
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Preference number: 1 (lower is better) Translates to: AHVVSLSLLAHRTCH*TCWVQGGQGGFGAR Trigger: CCTAGCTCCAAAGCCACCCTGCCCACCCTGTACCCAGCAGGTGCAGTGACATGTCCTATGAGCCAGCAGACTAAGACTCACAACATGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR CCA 90 bp | GTGAGTCTTAGTCTGCTGGCTCATAGGACATGTCACTGCACCTGCTaGGTACAGGGTGGGCAGGGTGGCTTTGGAGCTAGGAATCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: VSLSLLAHRTCHCTC*VQGGQGGFGARNQE Trigger: TTCCTGATTCCTAGCTCCAAAGCCACCCTGCCCACCCTGTACCCAGCAGGTGCAGTGACATGTCCTATGAGCCAGCAGACTAAGACTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR TCA 90 bp | CCTTCATGGCTCCCCCAGATCTGGGAGAATCTGATGTCCCTCTCCTaGGATCTGGGGTGTCATCTTTGCTCTCTGGTGACCTTGTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: PSWLPQIWENLMSLS*DLGCHLCSLVTLFP Trigger: AGGGAACAAGGTCACCAGAGAGCAAAGATGACACCCCAGATCTCAGGAGAGGGACATCAGATTCTCCCAGATCTGGGGGAGCCATGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR TCA 90 bp | TCTGGCACTGGAGTTATGGGTGGTTGTGAGTCTCCATGTGGGTGCTaGGGACCCAAACTGGGTCCTCAACAAGACCAGCCTGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: SGTGVMGGCESPCGC*GPKLGPQQDQPVLL Trigger: TAAGAGCACAGGCTGGTCTTGTTGAGGACCCAGTTTGGGTCCTCAGCACCCACATGGAGACTCACAACCACCCATAACTCCAGTGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR TCA 90 bp | AGAAGAGGTCATTTAGTCCTCTGGCACTGGAGTTATGGGTGGTTGTaGGTCTCCATGTGGGTGCTGAGGACCCAAACTGGGTCCTCAACA | + |
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Preference number: 1 (lower is better) Translates to: RRGHLVLWHWSYGWL*VSMWVLRTQTGSST Trigger: TGTTGAGGACCCAGTTTGGGTCCTCAGCACCCACATGGAGACTCACAACCACCCATAACTCCAGTGCCAGAGGACTAAATGACCTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR CCA 90 bp | ATGTATGCGTGTGAGCTTGTATGTATCTGCCAGCATGGGTGTGTCTaGGGAGACCTGTCACTTGATGAGTGGGAACAGGGGACTCTTTTC | + |
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Preference number: 1 (lower is better) Translates to: MYACELVCICQHGCV*GDLSLDEWEQGTLF Trigger: GAAAAGAGTCCCCTGTTCCCACTCATCAAGTGACAGGTCTCCCCAGACACACCCATGCTGGCAGATACATACAAGCTCACACGCATACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR TCA 90 bp | TCACTATGTGAACTCACAAAGATCCATCTGCCAGCCTCTGCCTCCTaGGGGCTGGGATTAAGGTCACCATGTCACCATGTCAAACTTCAT | + |
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Preference number: 1 (lower is better) Translates to: SLCELTKIHLPASAS*GLGLRSPCHHVKLH Trigger: ATGAAGTTTGACATGGTGACATGGTGACCTTAATCCCAGCCCTCAGGAGGCAGAGGCTGGCAGATGGATCTTTGTGAGTTCACATAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR CCA 90 bp | GTGCCTGTGTGTGCATGTCTATGTGTGGCTGTGTGTTTGTGCCTGTaGCTGTGTGTGTATACTGCATGTGTTTTACACTTTTTAAATTTT | + |
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Preference number: 1 (lower is better) Translates to: VPVCACLCVAVCLCL*LCVYTACVLHFLNF Trigger: AAAATTTAAAAAGTGTAAAACACATGCAGTATACACACACAGCCACAGGCACAAACACACAGCCACACATAGACATGCACACACAGGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR CAA 90 bp | GGAGGGGAAGAGGCAGCCTCCTGGGACATGGCTGCCAGGCCAGTCTaGAAATGTCACCCAGACTGGAGGGCTGAGCAGAGGGGTGACCCC | + |
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Preference number: 2 (lower is better) Translates to: GGEEAASWDMAARPV*KCHPDWRAEQRGDP Trigger: GGGGTCACCCCTCTGCTCAGCCCTCCAGTCTGGGTGACATTTCAAGACTGGCCTGGCAGCCATGTCCCAGGAGGCTGCCTCTTCCCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGGCTCATAGGACATGTCACTGCACCTGCTGGGTACAGGGTGGGCAGGGTGGGGTGGGTCTTGGCTaGTGTGAGGGGCCATCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LLAHRTCHCTCWVQGGQGGVGLG*CEGPSC Trigger: GCAGGATGGCCCCTCACAGCAGCCAAGACCCACCCC...ACCCTGCCCACCCTGTACCCAGCAGGTGCAGTGACATGTCCTATGAGCCAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR CAA 90 bp | GGGTGCTGGGATGGAGGCATCCACAGGGCAGCCCTCATCTCACATTaGCCACTGTCTCCTTGGAGACAGGGGGCTCCCCACAGCTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: GCWDGGIHRAALISH*PLSPWRQGAPHSFP Trigger: AGGGAAGCTGTGGGGAGCCCCCTGTCTCCAAGGAGACAGTGGCAAATGTGAGATGAGGGCTGCCCTGTGGATGCCTCCATCCCAGCACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTCACACCCGAAGGTTCTAGAAGCATCCATCCTGGCTGCTCCTGTGGGAGGGTGGCGGCTGGGGTaGGTCTTGGCTGCTGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SASHPKVLEASILAAPVGGWRLG*VLAAVR Trigger: CCTCACAGCAGCCAAGACCCACCCCAGCCGCCACCC...TCCCACAGGAGCAGCCAGGATGGATGCTTCTAGAACCTTCGGGTGTGAGGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGGCTCATAGGACATGTCACTGCACCTGCTGGGTACAGGGTGGGCAGGGTCTCAGCCAGGGGTGCTaGGATGGAGGCATCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: LLAHRTCHCTCWVQGGQGLSQGC*DGGIHR Trigger: CCTGTGGATGCCTCCATCCCAGCACCCCTGGCTGAG...ACCCTGCCCACCCTGTACCCAGCAGGTGCAGTGACATGTCCTATGAGCCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR TCA 90 bp | GTCTTGAAATGTCACCCAGACTGGAGGGCTGAGCAGAGGGGTGACCCCGTCGTGTCTGCCTCCTGCTTTTaGGGAGGGCTGGGATCTGGA | + |
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Preference number: 2 (lower is better) Translates to: VLKCHPDWRAEQRGDPVVSASCF*GGLGSG Trigger: TCCAGATCCCAGCCCTCCTCAAAAGCAGGAGGCAGA...CACGACGGGGTCACCCCTCTGCTCAGCCCTCCAGTCTGGGTGACATTTCAAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR GCA 90 bp | CATCTTTGGTTCAGTAAAAAGGCACTCGCCGACCTCGCTGTCCTCCTGTCTCTCTGTGAGGGGCCATCCTaGGGAGTGGGCGTGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: HLWFSKKALADLAVLLSLCEGPS*GVGVGV Trigger: CACCCCCACGCCCACTCCGCAGGATGGCCCCTCACA...GAGAGACAGGAGGACAGCGAGGTCGGCGAGTGCCTTTTTACTGAACCAAAGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGGCTCATAGGACATGTCACTGCACCTGCTGGGTACAGGGTGGGCAGGGTCTGCCAGGCCAGTCTTaGAATGTCACCCAGACTGGA | + |
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Preference number: 2 (lower is better) Translates to: LLAHRTCHCTCWVQGGQGLPGQS*NVTQTG Trigger: TCCAGTCTGGGTGACATTTCAAGACTGGCCTGGCAG...ACCCTGCCCACCCTGTACCCAGCAGGTGCAGTGACATGTCCTATGAGCCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCATGGGGATGCTGTAAGGATCCAGCTTGTTTTGGCCACTTGGGATGGGTCTAGGGCTTGCTTTGGCTaGTTCAGGGACGGCCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: GHGDAVRIQLVLATWDGSRACFG*FRDGPS Trigger: CGAGGGGCCGTCCCTGAACCAGCCAAAGCAAGCCCT...AGACCCATCCCAAGTGGCCAAAACAAGCTGGATCCTTACAGCATCCCCATGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGGCTCATAGGACATGTCACTGCACCTGCTGGGTACAGGGTGGGCAGGGTAGAGACCTGGCCTGGTaGAGAAAGTGGGGGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: LLAHRTCHCTCWVQGGQGRDLAW*RKWGKT Trigger: TGTCTTCCCCCACTTTCTCCACCAGGCCAGGTCTCT...ACCCTGCCCACCCTGTACCCAGCAGGTGCAGTGACATGTCCTATGAGCCAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGGCTCATAGGACATGTCACTGCACCTGCTGGGTACAGGGTGGGCAGGGTATGTATCTGCCAGCATaGGTGTGTCTGGGGAGACCT | + |
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Preference number: 2 (lower is better) Translates to: LLAHRTCHCTCWVQGGQGMYLPA*VCLGRP Trigger: AGGTCTCCCCAGACACACCCATGCTGGCAGATACAT...ACCCTGCCCACCCTGTACCCAGCAGGTGCAGTGACATGTCCTATGAGCCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGGCTCATAGGACATGTCACTGCACCTGCTGGGTACAGGGTGGGCAGGGTATCTTTGCTCTCTGGTaGCCTTGTTCCCTGTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: LLAHRTCHCTCWVQGGQGIFALW*PCSLCS Trigger: GCTACACAGGGAACAAGGTCACCAGAGAGCAAAGAT...ACCCTGCCCACCCTGTACCCAGCAGGTGCAGTGACATGTCCTATGAGCCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CCA 90 bp | ATGCGTGTGAGCTTGTATGTATCTGCCAGCATGGGTGTGTCTGGGGAGACCTGTCCGATGGTGCCTTCATaGCTCCCCCAGATCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: MRVSLYVSASMGVSGETCPMVPS*LPQIWE Trigger: CTCCCAGATCTGGGGGAGCCATGAAGGCACCATCGG...ACAGGTCTCCCCAGACACACCCATGCTGGCAGATACATACAAGCTCACACGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR GCA 90 bp | ATGCGTGTGAGCTTGTATGTATCTGCCAGCATGGGTGTGTCTGGGGAGACCTGTAAGGGACACCGATGGTaGCTTCATGGCTCCCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: MRVSLYVSASMGVSGETCKGHRW*LHGSPR Trigger: TCTGGGGGAGCCATGAAGGCACCATCGGTGTCCCTT...ACAGGTCTCCCCAGACACACCCATGCTGGCAGATACATACAAGCTCACACGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCATGGGGATGCTGTAAGGATCCAGCTTGTTTTGGCCACTTGGGATGGGTCTGCCTGGTGGAGAAAGTaGGGGAAGACAGGCAGATGT | + |
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Preference number: 2 (lower is better) Translates to: GHGDAVRIQLVLATWDGSAWWRK*GKTGRC Trigger: ACATCTGCCTGTCTTCCCCCACTTTCTCCACCAGGC...AGACCCATCCCAAGTGGCCAAAACAAGCTGGATCCTTACAGCATCCCCATGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CCA 90 bp | CATCTTTGGTTCAGTAAAAAGGCACTCGCCGACCTCGCTGTCCTCCTGTCTCTCAAGGCAGGGGATTGTTaGCACAGGCTATCCAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: HLWFSKKALADLAVLLSLKAGDC*HRLSRP Trigger: CGGCCTGGATAGCCTGTGCCAACAATCCCCTGCCTT...GAGAGACAGGAGGACAGCGAGGTCGGCGAGTGCCTTTTTACTGAACCAAAGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCAGAGATTTCCAGAACTTTGCATCCAAGGGACACCGATGGTGCCTTCATGGGAACTCAGCCAGGGGTaGTGGGATGGAGGCATCCAC | + |
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Preference number: 2 (lower is better) Translates to: FQRFPELCIQGTPMVPSWELSQG*WDGGIH Trigger: GTGGATGCCTCCATCCCAGCACCCCTGGCTGAGTTC...CCATGAAGGCACCATCGGTGTCCCTTGGATGCAAAGTTCTGGAAATCTCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGGCTCATAGGACATGTCACTGCACCTGCTGGGTACAGGGTGGGCAGGGTCTTGTTTTGGCCACTTaGGATGGGTCTCAGTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: LLAHRTCHCTCWVQGGQGLVLAT*DGSQFL Trigger: CAAAAACTGAGACCCATCCCAAGTGGCCAAAACAAG...ACCCTGCCCACCCTGTACCCAGCAGGTGCAGTGACATGTCCTATGAGCCAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CCA 90 bp | CATCTTTGGTTCAGTAAAAAGGCACTCGCCGACCTCGCTGTCCTCCTGTCTCTCAAGGAAACAGAGACCTaGCCTGGTGGAGAAAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: HLWFSKKALADLAVLLSLKETET*PGGESG Trigger: CCCACTTTCTCCACCAGGCCAGGTCTCTGTTTCCTT...GAGAGACAGGAGGACAGCGAGGTCGGCGAGTGCCTTTTTACTGAACCAAAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTAGAAGGAATTGTGCTGGACTATGGGTTCCCTGTGTAGGAAAGATCTTTGGTGGGGGACAGCCATaGGGTGAAAGTGGGGACACC | + |
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Preference number: 2 (lower is better) Translates to: KARRNCAGLWVPCVGKIFGGGQP*GESGDT Trigger: GGTGTCCCCACTTTCACCCCATGGCTGTCCCCCACC...AAAGATCTTTCCTACACAGGGAACCCATAGTCCAGCACAATTCCTTCTAGCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCAGAGATTTCCAGAACTTTGCATCCAAGGGACACCGATGGTGCCTTCATGGAGACAGGCAGATGTCTaGCTCCTGCTTTTGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: FQRFPELCIQGTPMVPSWRQADV*LLLLRR Trigger: CCTCCTCAAAAGCAGGAGGCAGACATCTGCCTGTCT...CCATGAAGGCACCATCGGTGTCCCTTGGATGCAAAGTTCTGGAAATCTCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCATGGGGATGCTGTAAGGATCCAGCTTGTTTTGGCCACTTGGGATGGGTCTTTTGTAAGATGTGCTTaGTTCTTGACCCACTCTACC | + |
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Preference number: 2 (lower is better) Translates to: GHGDAVRIQLVLATWDGSFVRCA*FLTHST Trigger: GGTAGAGTGGGTCAAGAATCAAGCACATCTTACAAA...AGACCCATCCCAAGTGGCCAAAACAAGCTGGATCCTTACAGCATCCCCATGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CCA 90 bp | GCGCTCAGGTTTGCACCCCAATCAATTGAAAAATGGGTGATGAATTCCAGAGATGGGCAGGATTGGGCATaGGGATGCTGTAAGGATCCA | + |
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Preference number: 2 (lower is better) Translates to: ALRFAPQSIEKWVMNSRDGQDWA*GCCKDP Trigger: TGGATCCTTACAGCATCCCCATGCCCAATCCTGCCC...ATCTCTGGAATTCATCACCCATTTTTCAATTGATTGGGGTGCAAACCTGAGCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR TCA 90 bp | GCGCTCAGGTTTGCACCCCAATCAATTGAAAAATGGGTGATGAATTCCAGAGATCTGATGTCCCTCTCCTaGGATCTGGGGTGTCATCTT | + |
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Preference number: 2 (lower is better) Translates to: ALRFAPQSIEKWVMNSRDLMSLS*DLGCHL Trigger: AAGATGACACCCCAGATCTCAGGAGAGGGACATCAG...ATCTCTGGAATTCATCACCCATTTTTCAATTGATTGGGGTGCAAACCTGAGCGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR TCA 90 bp | ATGCGTGTGAGCTTGTATGTATCTGCCAGCATGGGTGTGTCTGGGGAGACCTGTTGCACCCCAATCAATTaGAAAATGGGTGATGAATTC | + |
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Preference number: 2 (lower is better) Translates to: MRVSLYVSASMGVSGETCCTPIN*KMGDEF Trigger: GAATTCATCACCCATTTTTCAATTGATTGGGGTGCA...ACAGGTCTCCCCAGACACACCCATGCTGGCAGATACATACAAGCTCACACGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTAGAAGGAATTGTGCTGGACTATGGGTTCCCTGTGTAGGAAAGATCTTTGGACTCTTTTCACTCTaGGCATTCTGCCTCACACCC | + |
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Preference number: 2 (lower is better) Translates to: KARRNCAGLWVPCVGKIFGLFSL*AFCLTP Trigger: GGGTGTGAGGCAGAATGCTCAGAGTGAAAAGAGTCC...AAAGATCTTTCCTACACAGGGAACCCATAGTCCAGCACAATTCCTTCTAGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTAGAAGGAATTGTGCTGGACTATGGGTTCCCTGTGTAGGAAAGATCTTTGGATCCAGCTTGTTTTaGCCACTTGGGATGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: KARRNCAGLWVPCVGKIFGSSLF*PLGMGL Trigger: GAGACCCATCCCAAGTGGCCAAAACAAGCTGGATCC...AAAGATCTTTCCTACACAGGGAACCCATAGTCCAGCACAATTCCTTCTAGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTAGAAGGAATTGTGCTGGACTATGGGTTCCCTGTGTAGGAAAGATCTTTCCCTCTCCTGAGATCTaGGGTGTCATCTTTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: KARRNCAGLWVPCVGKIFPSPEI*GVIFAL Trigger: GAGAGCAAAGATGACACCCCAGATCTCAGGAGAGGG...AAAGATCTTTCCTACACAGGGAACCCATAGTCCAGCACAATTCCTTCTAGCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR GCA 90 bp | GCGCTCAGGTTTGCACCCCAATCAATTGAAAAATGGGTGATGAATTCCAGAGATCCCTCATCTCACATTTaGCACTGTCTCCTTGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: ALRFAPQSIEKWVMNSRDPSSHI*HCLLGD Trigger: GTCTCCAAGGAGACAGTGGCAAATGTGAGATGAGGG...ATCTCTGGAATTCATCACCCATTTTTCAATTGATTGGGGTGCAAACCTGAGCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTAGAAGGAATTGTGCTGGACTATGGGTTCCCTGTGTAGGAAAGATCTTTAGGAGGGCTGGGATCTaGAAAGAAGGGTTCTCTATT | + |
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Preference number: 2 (lower is better) Translates to: KARRNCAGLWVPCVGKIFRRAGI*KEGFSI Trigger: AATAGAGAACCCTTCTTTCCAGATCCCAGCCCTCCT...AAAGATCTTTCCTACACAGGGAACCCATAGTCCAGCACAATTCCTTCTAGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGCTAGAAGGAATTGTGCTGGACTATGGGTTCCCTGTGTAGGAAAGATCTTTAGATTTCCAGAACTTTaGATCCAAGGGACACCGATG | + |
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Preference number: 2 (lower is better) Translates to: KARRNCAGLWVPCVGKIFRFPEL*IQGTPM Trigger: CATCGGTGTCCCTTGGATGCAAAGTTCTGGAAATCT...AAAGATCTTTCCTACACAGGGAACCCATAGTCCAGCACAATTCCTTCTAGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTAGAAGGAATTGTGCTGGACTATGGGTTCCCTGTGTAGGAAAGATCTTTAAAAGCTTTTATTGGTaGCTCAGAAATGGAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: KARRNCAGLWVPCVGKIFKSFYW*LRNGAQ Trigger: CTGGGCTCCATTTCTGAGTCACCAATAAAAGCTTTT...AAAGATCTTTCCTACACAGGGAACCCATAGTCCAGCACAATTCCTTCTAGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR CAA 90 bp | ACAAGTGAGGCATATGTGTTTGTGTGTGTAGATTCTAACTTGTCATaGAGTCATAGAACTTTTGAGGCAGGCCCTCACTATGTGAACTCA | + |
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Preference number: 2 (lower is better) Translates to: TSEAYVFVCVDSNLS*SHRTFEAGPHYVNS Trigger: TGAGTTCACATAGTGAGGGCCTGCCTCAAAAGTTCTATGACTCAATGACAAGTTAGAATCTACACACACAAACACATATGCCTCACTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR CAA 90 bp | TATCTCACAAGTGAGGCATATGTGTTTGTGTGTGTAGATTCTAACTaGTCATTGAGTCATAGAACTTTTGAGGCAGGCCCTCACTATGTG | + |
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Preference number: 2 (lower is better) Translates to: YLTSEAYVFVCVDSN*SLSHRTFEAGPHYV Trigger: CACATAGTGAGGGCCTGCCTCAAAAGTTCTATGACTCAATGACAAGTTAGAATCTACACACACAAACACATATGCCTCACTTGTGAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR CCA 72 bp | GCTGTGAGGGGCCATCCTGCGGAGTGGGCGTGGGGGTaGGGCCGCGGCTCGGAGGGCAGGATTGGGCATGGG | + |
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Preference number: 3 (lower is better) Translates to: AVRGHPAEWAWG*GRGSEGRIGHG Trigger: CCCATGCCCAATCCTGCCCTCCGAGCCGCGGCCCCACCCCCACGCCCACTCCGCAGGATGGCCCCTCACAGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR-3UTR CAA 90 bp | GTCTTGAAATGTCACCCAGACTGGAGGGCTGAGCAGAGGGGTGACCCCGTCGTGCGGCTGGGGTGGGTCTaGGCTGCTGTGAGGGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: VLKCHPDWRAEQRGDPVVRLGWV*AAVRGH Trigger: ATGGCCCCTCACAGCAGCCAAGACCCACCCCAGCCG...CACGACGGGGTCACCCCTCTGCTCAGCCCTCCAGTCTGGGTGACATTTCAAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR TCA 72 bp | AGGCAGCCTCCTGGGACATGGCTGCCAGGCCAGTCTTaGAATGTCACCCAGACTGGAGGGCTGAGCAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: RQPPGTWLPGQS*NVTQTGGLSRG Trigger: CCCTCTGCTCAGCCCTCCAGTCTGGGTGACATTTCAAGACTGGCCTGGCAGCCATGTCCCAGGAGGCTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR GCA 72 bp | GGGCCGCGGCTCGGAGGGCAGGATTGGGCATGGGGATaGTGTAAGGATCCAGCTTGTTTTGGCCACTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: GPRLGGQDWAWG*CKDPACFGHLG Trigger: TCCCAAGTGGCCAAAACAAGCTGGATCCTTACAGCATCCCCATGCCCAATCCTGCCCTCCGAGCCGCGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR TCA 72 bp | GGAGGGATGGGGGTCCACCTGGGCTTAGAGGGGCACTaGTATCTGTGTGTGTGCGTGCGTGCATGTGTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: GGMGVHLGLEGH*YLCVCVRACVR Trigger: ACGCACACATGCACGCACGCACACACACAGATATCAGTGCCCCTCTAAGCCCAGGTGGACCCCCATCCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR CCA 72 bp | ATGGCTGCCAGGCCAGTCTTGAAATGTCACCCAGACTaGAGGGCTGAGCAGAGGGGTGACCCCGTCGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: MAARPVLKCHPD*RAEQRGDPVVS Trigger: AGACACGACGGGGTCACCCCTCTGCTCAGCCCTCCAGTCTGGGTGACATTTCAAGACTGGCCTGGCAGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR CCA 72 bp | AGTCTGCTGGCTCATAGGACATGTCACTGCACCTGCTaGGTACAGGGTGGGCAGGGTGGCTTTGGAGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLLAHRTCHCTC*VQGGQGGFGAR Trigger: CCTAGCTCCAAAGCCACCCTGCCCACCCTGTACCCAGCAGGTGCAGTGACATGTCCTATGAGCCAGCAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR-3UTR CAA 90 bp | CATCTTTGGTTCAGTAAAAAGGCACTCGCCGACCTCGCTGTCCTCCTGTCTCTCGGGATTCCCAGGATCTaGAACCCCAGAGGGGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HLWFSKKALADLAVLLSLGIPRI*NPRGGG Trigger: CCCTCCCCCTCTGGGGTTCAAGATCCTGGGAATCCC...GAGAGACAGGAGGACAGCGAGGTCGGCGAGTGCCTTTTTACTGAACCAAAGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGCGTGTGAGCTTGTATGTATCTGCCAGCATGGGTGTGTCTGGGGAGACCTGTGTCTGCCTCCTGCTTTaGAGGAGGGCTGGGATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: MRVSLYVSASMGVSGETCVCLLL*RRAGIW Trigger: CCAGATCCCAGCCCTCCTCAAAAGCAGGAGGCAGAC...ACAGGTCTCCCCAGACACACCCATGCTGGCAGATACATACAAGCTCACACGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR GCA 72 bp | GTGAGTCTTAGTCTGCTGGCTCATAGGACATGTCACTaGACCTGCTGGGTACAGGGTGGGCAGGGTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSLSLLAHRTCH*TCWVQGGQGGF Trigger: AAAGCCACCCTGCCCACCCTGTACCCAGCAGGTGCAGTGACATGTCCTATGAGCCAGCAGACTAAGACTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR TCA 72 bp | GTGGGGGAAGACAGGCAGATGTCTGCCTCCTGCTTTTaGGGAGGGCTGGGATCTGGAAAGAAGGGTTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VGEDRQMSASCF*GGLGSGKKGSL Trigger: TAGAGAACCCTTCTTTCCAGATCCCAGCCCTCCTCAAAAGCAGGAGGCAGACATCTGCCTGTCTTCCCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR TCA 72 bp | CTCCCCCAGATCTGGGAGAATCTGATGTCCCTCTCCTaGGATCTGGGGTGTCATCTTTGCTCTCTGGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: LPQIWENLMSLS*DLGCHLCSLVT Trigger: GGTCACCAGAGAGCAAAGATGACACCCCAGATCTCAGGAGAGGGACATCAGATTCTCCCAGATCTGGGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR TCA 72 bp | GGAGTTATGGGTGGTTGTGAGTCTCCATGTGGGTGCTaGGGACCCAAACTGGGTCCTCAACAAGACCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GVMGGCESPCGC*GPKLGPQQDQP Trigger: AGGCTGGTCTTGTTGAGGACCCAGTTTGGGTCCTCAGCACCCACATGGAGACTCACAACCACCCATAACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTGGGGAAATCTTTGGTATCAAACGTGATCTTTCGAATCACAGCGTGGGCTTTTGCCACTGTCTCCTaGGAGACAGGGGGCTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GVGKSLVSNVIFRITAWAFATVS*ETGGSP Trigger: TGGGGAGCCCCCTGTCTCCAAGGAGACAGTGGCAAA...AGCCCACGCTGTGATTCGAAAGATCACGTTTGATACCAAAGATTTCCCCACCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCTCACACCCGAAGGTTCTAGAAGCATCCATCCTGGCTGCTCCTGTGGGATCTGGGGTGTCATCTTaGCTCTCTGGTGACCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SASHPKVLEASILAAPVGSGVSS*LSGDLV Trigger: AACAAGGTCACCAGAGAGCAAAGATGACACCCCAGA...TCCCACAGGAGCAGCCAGGATGGATGCTTCTAGAACCTTCGGGTGTGAGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR TCA 72 bp | CATTTAGTCCTCTGGCACTGGAGTTATGGGTGGTTGTaGGTCTCCATGTGGGTGCTGAGGACCCAAACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HLVLWHWSYGWL*VSMWVLRTQTG Trigger: CCCAGTTTGGGTCCTCAGCACCCACATGGAGACTCACAACCACCCATAACTCCAGTGCCAGAGGACTAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACATAGCAAGGTGCTTATAGTGAACTCAGCCAGGGGTGCTGGGATGGAGGCAGCCCTCATCTCACATTaGCCACTGTCTCCTTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SHSKVLIVNSARGAGMEAALISH*PLSPWR Trigger: TCTCCAAGGAGACAGTGGCAAATGTGAGATGAGGGC...TGCCTCCATCCCAGCACCCCTGGCTGAGTTCACTATAAGCACCTTGCTATGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR TCA 72 bp | CATCCTGGCTGCTCCTGTGGGAGAGCAGCAAATCACTaGGGACAGAGGACACTCTACACACATCTTTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: HPGCSCGRAANH*GQRTLYTHLWF Trigger: GAACCAAAGATGTGTGTAGAGTGTCCTCTGTCCTCAGTGATTTGCTGCTCTCCCACAGGAGCAGCCAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR CCA 72 bp | AGAGATTTCCAGAACTTTGCATCCAAGGGACACCGATaGTGCCTTCATGGCTCCCCCAGATCTGGGAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: RDFQNFASKGHR*CLHGSPRSGRI Trigger: GATTCTCCCAGATCTGGGGGAGCCATGAAGGCACCATCGGTGTCCCTTGGATGCAAAGTTCTGGAAATCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR CCA 72 bp | TGCTGGACTATGGGTTCCCTGTGTAGGAAAGATCTTTaGTGGGTAAGGACCAGAAGGGCAGATGGAGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: CWTMGSLCRKDL*WVRTRRADGGM Trigger: CATCCCTCCATCTGCCCTTCTGGTCCTTACCCACCAAAGATCTTTCCTACACAGGGAACCCATAGTCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTGGGGAAATCTTTGGTATCAAACGTGATCTTTCGAATCACAGCGTGGGCTAGGATCCAGCTTGTTTaGGCCACTTGGGATGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GVGKSLVSNVIFRITAWARIQLV*ATWDGS Trigger: AGACCCATCCCAAGTGGCCAAAACAAGCTGGATCCT...AGCCCACGCTGTGATTCGAAAGATCACGTTTGATACCAAAGATTTCCCCACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCTAGAAGGAATTGTGCTGGACTATGGGTTCCCTGTGTAGGAAAGATCTTTGCTGCCAGGCCAGTCTaGAAATGTCACCCAGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: KARRNCAGLWVPCVGKIFAARPV*KCHPDW Trigger: CCAGTCTGGGTGACATTTCAAGACTGGCCTGGCAGC...AAAGATCTTTCCTACACAGGGAACCCATAGTCCAGCACAATTCCTTCTAGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR TCA 72 bp | TCTCCTGAGATCTGGGGTGTCATCTTTGCTCTCTGGTaGCCTTGTTCCCTGTGTAGCATTCTTCACATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SPEIWGVIFALW*PCSLCSILHIA Trigger: TGCTATGTGAAGAATGCTACACAGGGAACAAGGTCACCAGAGAGCAAAGATGACACCCCAGATCTCAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR TCA 72 bp | TTTTTAAATACCCGGGTTCTGTTTGTAAGATGTGCTTaGTTCTTGACCCACTCTACCCTCAGGGTCCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FLNTRVLFVRCA*FLTHSTLRVPL Trigger: CAAAGGGACCCTGAGGGTAGAGTGGGTCAAGAATCAAGCACATCTTACAAACAGAACCCGGGTATTTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR TCA 72 bp | TGTGTGTGTGTGTGTAATTTGAAAAGCTTTTATTGGTaGCTCAGAAATGGAGCCCAGCCTAGAATCCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCNLKSFYW*LRNGAQPRILQ Trigger: CTGGAGGATTCTAGGCTGGGCTCCATTTCTGAGTCACCAATAAAAGCTTTTCAAATTACACACACACACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR GCA 90 bp | GTCTTGAAATGTCACCCAGACTGGAGGGCTGAGCAGAGGGGTGACCCCGTCGTGAGCGGCGGCAGGTGCTaGAAGGGCGTGAGCGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLKCHPDWRAEQRGDPVVSGGRC*KGVSVV Trigger: CACCACGCTCACGCCCTTGCAGCACCTGCCGCCGCT...CACGACGGGGTCACCCCTCTGCTCAGCCCTCCAGTCTGGGTGACATTTCAAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTCACACCCGAAGGTTCTAGAAGCATCCATCCTGGCTGCTCCTGTGGGAGTGAGGGTGAGCGTGTaGATGGCCTCCGTGCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SASHPKVLEASILAAPVGVRVSV*MASVRP Trigger: GGGGCGCACGGAGGCCATCCACACGCTCACCCTCAC...TCCCACAGGAGCAGCCAGGATGGATGCTTCTAGAACCTTCGGGTGTGAGGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| 3UTR CAA 72 bp | GAGGCAGCCTCCTGGGACATGGCTGCCAGGCCAGTCTaGAAATGTCACCCAGACTGGAGGGCTGAGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EAASWDMAARPV*KCHPDWRAEQR Trigger: CCTCTGCTCAGCCCTCCAGTCTGGGTGACATTTCAAGACTGGCCTGGCAGCCATGTCCCAGGAGGCTGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR TCA 90 bp | TCTGCCTCACACCCGAAGGTTCTAGAAGCATCCATCCTGGCTGCTCCTGTGGGAGGTGCTGCAAGGGCGTaGGCGTGGTGTAGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SASHPKVLEASILAAPVGGAARA*AWCRCH Trigger: GTGGCACCTACACCACGCTCACGCCCTTGCAGCACC...TCCCACAGGAGCAGCCAGGATGGATGCTTCTAGAACCTTCGGGTGTGAGGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGCTCATAGGACATGTCACTGCACCTGCTGGGTACAGGGTGGGCAGGGTGGCGCTGCAGGTCTGTaGACACGAGGCGTTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLAHRTCHCTCWVQGGQGGAAGL*TRGVAS Trigger: AGAAGCAACGCCTCGTGTTCACAGACCTGCAGCGCC...ACCCTGCCCACCCTGTACCCAGCAGGTGCAGTGACATGTCCTATGAGCCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR GCA 90 bp | ATGCGTGTGAGCTTGTATGTATCTGCCAGCATGGGTGTGTCTGGGGAGACCTGTGCCAGCGGCGGCAGGTaGTGCAAGGGCGTGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: MRVSLYVSASMGVSGETCASGGR*CKGVSV Trigger: CACGCTCACGCCCTTGCAGCACCTGCCGCCGCTGGC...ACAGGTCTCCCCAGACACACCCATGCTGGCAGATACATACAAGCTCACACGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR CCA 90 bp | TCACATAGCAAGGTGCTTATAGTGAACTCAGCCAGGGGTGCTGGGATGGAGGCAGGGCAGCGGCGACAGTaGCGACCCCATGGTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHSKVLIVNSARGAGMEAGQRRQ*RPHGGQ Trigger: CTGCCCACCATGGGGTCGCCACTGTCGCCGCTGCCC...TGCCTCCATCCCAGCACCCCTGGCTGAGTTCACTATAAGCACCTTGCTATGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR GCA 90 bp | CATCTTTGGTTCAGTAAAAAGGCACTCGCCGACCTCGCTGTCCTCCTGTCTCTCGTTGATCTCTTCGGCTaGAGCGCCGGCTCCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLWFSKKALADLAVLLSLVDLFG*SAGSRA Trigger: GGCCCGGGAGCCGGCGCTGCAGCCGAAGAGATCAAC...GAGAGACAGGAGGACAGCGAGGTCGGCGAGTGCCTTTTTACTGAACCAAAGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR GCA 90 bp | ATGCGTGTGAGCTTGTATGTATCTGCCAGCATGGGTGTGTCTGGGGAGACCTGTTCCAGGGCTTCGGGTTaGGCAGCAGGTCGGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: MRVSLYVSASMGVSGETCSRASG*AAGRRA Trigger: CGCTCTCCGACCTGCTGCGCAACCCGAAGCCCTGGA...ACAGGTCTCCCCAGACACACCCATGCTGGCAGATACATACAAGCTCACACGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR GCA 90 bp | TCTGCCTCACACCCGAAGGTTCTAGAAGCATCCATCCTGGCTGCTCCTGTGGGAATCAGCGTGCGGCGCTaGAGGTCTGTGAACACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SASHPKVLEASILAAPVGISVRR*RSVNTR Trigger: CCTCGTGTTCACAGACCTGCAGCGCCGCACGCTGAT...TCCCACAGGAGCAGCCAGGATGGATGCTTCTAGAACCTTCGGGTGTGAGGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR CCA 90 bp | TTCCAGAGATTTCCAGAACTTTGCATCCAAGGGACACCGATGGTGCCTTCATGGCGCACGCCATACCCATaGCCGGGTGCAGGGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQRFPELCIQGTPMVPSWRTPYP*PGAGGQ Trigger: CTGGCCCCCTGCACCCGGCCATGGGTATGGCGTGCG...CCATGAAGGCACCATCGGTGTCCCTTGGATGCAAAGTTCTGGAAATCTCTGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR CCA 90 bp | CAGGATTGGGCATGGGGATGCTGTAAGGATCCAGCTTGTTTTGGCCACTTGGGAGCCACCGCGTGCTGGTaGAACTTATCGGCCACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QDWAWGCCKDPACFGHLGATACW*NLSATA Trigger: CGCCGTGGCCGATAAGTTCCACCAGCACGCGGTGGC...TCCCAAGTGGCCAAAACAAGCTGGATCCTTACAGCATCCCCATGCCCAATCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR GCA 90 bp | TTCCAGAGATTTCCAGAACTTTGCATCCAAGGGACACCGATGGTGCCTTCATGGTCGGAGAGCGTGCCCTaGGAGCGGCACAGGATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FQRFPELCIQGTPMVPSWSESVP*ERHRMR Trigger: GCGCATCCTGTGCCGCTCGCAGGGCACGCTCTCCGA...CCATGAAGGCACCATCGGTGTCCCTTGGATGCAAAGTTCTGGAAATCTCTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR CCA 90 bp | GGGCATGGGGATGCTGTAAGGATCCAGCTTGTTTTGGCCACTTGGGATGGGTCTACAGTGGCGACCCCATaGTGGGCAGCTCCTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GHGDAVRIQLVLATWDGSTVATP*WAAPCH Trigger: ATGGCAAGGAGCTGCCCACCATGGGGTCGCCACTGT...AGACCCATCCCAAGTGGCCAAAACAAGCTGGATCCTTACAGCATCCCCATGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR CCA 90 bp | GGTTCTGTTTGTAAGATGTGCTTGATTCTTGACCCACTCTACCCTCAGGGTCCCCAGAAGCGCCGCGTGTaGCTCGAAGGCGGCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSVCKMCLILDPLYPQGPQKRRV*LEGGRW Trigger: CCACCTGCCGCCTTCGAGCCACACGCGGCGCTTCTG...GGGACCCTGAGGGTAGAGTGGGTCAAGAATCAAGCACATCTTACAAACAGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR GCA 90 bp | TCACATAGCAAGGTGCTTATAGTGAACTCAGCCAGGGGTGCTGGGATGGAGGCATGCGAGATGGTGGCTTaGATCTCCTTGGACGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SHSKVLIVNSARGAGMEACEMVA*ISLDGR Trigger: GCGGCCGTCCAAGGAGATGCAAGCCACCATCTCGCA...TGCCTCCATCCCAGCACCCCTGGCTGAGTTCACTATAAGCACCTTGCTATGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR TCA 90 bp | ATGCGTGTGAGCTTGTATGTATCTGCCAGCATGGGTGTGTCTGGGGAGACCTGTCCACCTCTTTGGTGTTaGTCTCTTCGGCTGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: MRVSLYVSASMGVSGETCPPLWC*SLRLQR Trigger: GCGCTGCAGCCGAAGAGATCAACACCAAAGAGGTGG...ACAGGTCTCCCCAGACACACCCATGCTGGCAGATACATACAAGCTCACACGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR CCA 90 bp | TCACATAGCAAGGTGCTTATAGTGAACTCAGCCAGGGGTGCTGGGATGGAGGCAGCTGCTGCGAGATGGTaGCTTGCATCTCCTTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SHSKVLIVNSARGAGMEAAAARW*LASPWT Trigger: CGTCCAAGGAGATGCAAGCCACCATCTCGCAGCAGC...TGCCTCCATCCCAGCACCCCTGGCTGAGTTCACTATAAGCACCTTGCTATGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR TCA 90 bp | CAGGATTGGGCATGGGGATGCTGTAAGGATCCAGCTTGTTTTGGCCACTTGGGAGCCCTCTCCTTCTGCTaGTCCTGCTCTTTACGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QDWAWGCCKDPACFGHLGALSFC*SCSLRL Trigger: CAAGCGTAAAGAGCAGGATCAGCAGAAGGAGAGGGC...TCCCAAGTGGCCAAAACAAGCTGGATCCTTACAGCATCCCCATGCCCAATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR TCA 90 bp | ATGCGTGTGAGCTTGTATGTATCTGCCAGCATGGGTGTGTCTGGGGAGACCTGTGCCGCTTGTTCTCCTTaGAGATGGCAATCAGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MRVSLYVSASMGVSGETCAACSP*RWQSAC Trigger: GCACGCTGATTGCCATCTTCAAGGAGAACAAGCGGC...ACAGGTCTCCCCAGACACACCCATGCTGGCAGATACATACAAGCTCACACGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR GCA 90 bp | GCGCTCAGGTTTGCACCCCAATCAATTGAAAAATGGGTGATGAATTCCAGAGATATACCCATGGCCGGGTaGAGGGGGCCAGCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALRFAPQSIEKWVMNSRDIPMAG*RGPASS Trigger: GGAGCTGGCTGGCCCCCTGCACCCGGCCATGGGTAT...ATCTCTGGAATTCATCACCCATTTTTCAATTGATTGGGGTGCAAACCTGAGCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGGAAATCTTTGGTATCAAACGTGATCTTTCGAATCACAGCGTGGGCTTCCAGGCCCAGCTGCTaGGAGATGGTGGCTTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GVGKSLVSNVIFRITAWASRPSC*EMVACI Trigger: GATGCAAGCCACCATCTCGCAGCAGCTGGGCCTGGA...AGCCCACGCTGTGATTCGAAAGATCACGTTTGATACCAAAGATTTCCCCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR CCA 90 bp | TTCCAGAGATTTCCAGAACTTTGCATCCAAGGGACACCGATGGTGCCTTCATGGGTGGCGACCCCATGGTaGGCAGCTCCTTGCCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: FQRFPELCIQGTPMVPSWVATPW*AAPCHK Trigger: CTTATGGCAAGGAGCTGCCCACCATGGGGTCGCCAC...CCATGAAGGCACCATCGGTGTCCCTTGGATGCAAAGTTCTGGAAATCTCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR TCA 90 bp | AAGGCTAGAAGGAATTGTGCTGGACTATGGGTTCCCTGTGTAGGAAAGATCTTTGCTTCAGCTCGGCGGTaGTGCGCTGGGCCACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KARRNCAGLWVPCVGKIFASARR*CAGPPL Trigger: AAGAGGTGGCCCAGCGCATCACCGCCGAGCTGAAGC...AAAGATCTTTCCTACACAGGGAACCCATAGTCCAGCACAATTCCTTCTAGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR GCA 90 bp | AAGGCTAGAAGGAATTGTGCTGGACTATGGGTTCCCTGTGTAGGAAAGATCTTTGCCCCAGCCACCGCGTaGTGGTGGAACTTATCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KARRNCAGLWVPCVGKIFAPATA*WWNLSA Trigger: GGCCGATAAGTTCCACCAGCACGCGGTGGCTGGGGC...AAAGATCTTTCCTACACAGGGAACCCATAGTCCAGCACAATTCCTTCTAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
||
| CDS-3UTR GCA 90 bp | GCGCTCAGGTTTGCACCCCAATCAATTGAAAAATGGGTGATGAATTCCAGAGATCAGCCCAGCGGTTCATaGAGCGGCGACGGGCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALRFAPQSIEKWVMNSRDQPSGS*SGDGRS Trigger: TGAACGCCCGTCGCCGCTGCATGAACCGCTGGGCTG...ATCTCTGGAATTCATCACCCATTTTTCAATTGATTGGGGTGCAAACCTGAGCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR CAA 72 bp | TCTGATGTCCCTCTCCTGAGATCTGGGGTGTCATCTTaGCTCTCTGGTGACCTTGTTCCCTGTGTAGCATTC | + |
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Preference number: 4 (lower is better) Translates to: SDVPLLRSGVSS*LSGDLVPCVAF Trigger: GAATGCTACACAGGGAACAAGGTCACCAGAGAGCAAAGATGACACCCCAGATCTCAGGAGAGGGACATCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS-3UTR GCA 90 bp | AAGGCTAGAAGGAATTGTGCTGGACTATGGGTTCCCTGTGTAGGAAAGATCTTTTGGTGGGCAGCTCCTTaGCATAAGGCCCGTAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: KARRNCAGLWVPCVGKIFWWAAP*HKARRG Trigger: ACCTCTACGGGCCTTATGGCAAGGAGCTGCCCACCA...AAAGATCTTTCCTACACAGGGAACCCATAGTCCAGCACAATTCCTTCTAGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| 3UTR CAA 72 bp | AGTGAGGCATATGTGTTTGTGTGTGTAGATTCTAACTaGTCATTGAGTCATAGAACTTTTGAGGCAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SEAYVFVCVDSN*SLSHRTFEAGP Trigger: AGGGCCTGCCTCAAAAGTTCTATGACTCAATGACAAGTTAGAATCTACACACACAAACACATATGCCTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS CCA 90 bp | CCGGCCACCAGGCCTGGGCGCCCCGATGCCACTAGGCTTCGGTGTTaGGCCGCGGCGGAGCGCGCGTGGCCCGGGCTCAGCAGCTCGCCG | + |
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Preference number: 5 (lower is better) Translates to: PATRPGRPDATRLRC*AAAERAWPGLSSSP Trigger: CGGCGAGCTGCTGAGCCCGGGCCACGCGCGCTCCGCCGCGGCCCAACACCGAAGCCTAGTGGCATCGGGGCGCCCAGGCCTGGTGGCCGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS CCA 90 bp | CCCGATGCCACTAGGCTTCGGTGTTGGGCCGCGGCGGAGCGCGCGTaGCCCGGGCTCAGCAGCTCGCCGGCTTGCGCGTGTGTCACCCCG | + |
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Preference number: 5 (lower is better) Translates to: PDATRLRCWAAAERA*PGLSSSPACACVTP Trigger: CGGGGTGACACACGCGCAAGCCGGCGAGCTGCTGAGCCCGGGCCACGCGCGCTCCGCCGCGGCCCAACACCGAAGCCTAGTGGCATCGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS GCA 90 bp | CGCTGGGCAGCGGCGACAGTGGCGACCCCATGGTGGGCAGCTCCTTaGCATAAGGCCCGTAGAGGTGGCCCACCGAGGCCAGCGCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: RWAAATVATPWWAAP*HKARRGGPPRPAPP Trigger: GGGCGGCGCTGGCCTCGGTGGGCCACCTCTACGGGCCTTATGGCAAGGAGCTGCCCACCATGGGGTCGCCACTGTCGCCGCTGCCCAGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS TCA 90 bp | ACTTATCGGCCACGGCGGCCAGCGGCGGCAGGTGCTGCAAGGGCGTaGGCGTGGTGTAGGTGCCACCCAAACCTGGGGCCTCGCACGCCA | + |
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Preference number: 5 (lower is better) Translates to: TYRPRRPAAAGAARA*AWCRCHPNLGPRTP Trigger: TGGCGTGCGAGGCCCCAGGTTTGGGTGGCACCTACACCACGCTCACGCCCTTGCAGCACCTGCCGCCGCTGGCCGCCGTGGCCGATAAGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS-3UTR CAA 90 bp | TCTGCCTCACACCCGAAGGTTCTAGAAGCATCCATCCTGGCTGCTCCTGTGGGAGTGGCTTGCATCTCCTaGGACGGCCGCTTGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SASHPKVLEASILAAPVGVACIS*DGRLFS Trigger: GGAGAACAAGCGGCCGTCCAAGGAGATGCAAGCCAC...TCCCACAGGAGCAGCCAGGATGGATGCTTCTAGAACCTTCGGGTGTGAGGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS-3UTR CAA 90 bp | TTCCAGAGATTTCCAGAACTTTGCATCCAAGGGACACCGATGGTGCCTTCATGGGCAGGTGGCAGTAGTTaGTCCCCGGCCAGGTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: FQRFPELCIQGTPMVPSWAGGSS*SPARWP Trigger: GGGCCACCTGGCCGGGGACAAACTACTGCCACCTGC...CCATGAAGGCACCATCGGTGTCCCTTGGATGCAAAGTTCTGGAAATCTCTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS-3UTR CAA 90 bp | TCTGCCTCACACCCGAAGGTTCTAGAAGCATCCATCCTGGCTGCTCCTGTGGGAGGCCGCTTGTTCTCCTaGAAGATGGCAATCAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: SASHPKVLEASILAAPVGGRLFS*KMAISV Trigger: CACGCTGATTGCCATCTTCAAGGAGAACAAGCGGCC...TCCCACAGGAGCAGCCAGGATGGATGCTTCTAGAACCTTCGGGTGTGAGGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS-3UTR CAA 90 bp | CAGGATTGGGCATGGGGATGCTGTAAGGATCCAGCTTGTTTTGGCCACTTGGGAGCCACCTCTTTGGTGTaGATCTCTTCGGCTGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: QDWAWGCCKDPACFGHLGATSLV*ISSAAA Trigger: CGCTGCAGCCGAAGAGATCAACACCAAAGAGGTGGC...TCCCAAGTGGCCAAAACAAGCTGGATCCTTACAGCATCCCCATGCCCAATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS-3UTR CAA 90 bp | TTCCAGAGATTTCCAGAACTTTGCATCCAAGGGACACCGATGGTGCCTTCATGGCTGCGAGATGGTGGCTaGCATCTCCTTGGACGGCCG | + |
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Preference number: 5 (lower is better) Translates to: FQRFPELCIQGTPMVPSWLRDGG*HLLGRP Trigger: CGGCCGTCCAAGGAGATGCAAGCCACCATCTCGCAG...CCATGAAGGCACCATCGGTGTCCCTTGGATGCAAAGTTCTGGAAATCTCTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS CCA 72 bp | AGGCCTGGGCGCCCCGATGCCACTAGGCTTCGGTGTTaGGCCGCGGCGGAGCGCGCGTGGCCCGGGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: RPGRPDATRLRC*AAAERAWPGLS Trigger: GCTGAGCCCGGGCCACGCGCGCTCCGCCGCGGCCCAACACCGAAGCCTAGTGGCATCGGGGCGCCCAGGCCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS CCA 72 bp | GGATGGCCTCCGTGCGCCCCAGCCACCGCGTGCTGGTaGAACTTATCGGCCACGGCGGCCAGCGGCGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GWPPCAPATACW*NLSATAASGGR Trigger: CCTGCCGCCGCTGGCCGCCGTGGCCGATAAGTTCCACCAGCACGCGGTGGCTGGGGCGCACGGAGGCCATCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS GCA 72 bp | GCGTGTGGATGGCCTCCGTGCGCCCCAGCCACCGCGTaGTGGTGGAACTTATCGGCCACGGCGGCCAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: ACGWPPCAPATA*WWNLSATAASG Trigger: GCCGCTGGCCGCCGTGGCCGATAAGTTCCACCAGCACGCGGTGGCTGGGGCGCACGGAGGCCATCCACACGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS CCA 72 bp | TGTGGATGGCCTCCGTGCGCCCCAGCCACCGCGTGCTaGTGGAACTTATCGGCCACGGCGGCCAGCGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: CGWPPCAPATAC*WNLSATAASGG Trigger: GCCGCCGCTGGCCGCCGTGGCCGATAAGTTCCACCAGCACGCGGTGGCTGGGGCGCACGGAGGCCATCCACA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS TCA 72 bp | CCACGGCGGCCAGCGGCGGCAGGTGCTGCAAGGGCGTaGGCGTGGTGTAGGTGCCACCCAAACCTGGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PRRPAAAGAARA*AWCRCHPNLGP Trigger: AGGCCCCAGGTTTGGGTGGCACCTACACCACGCTCACGCCCTTGCAGCACCTGCCGCCGCTGGCCGCCGTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS CCA 72 bp | GCGCGCTGGGCAGCGGCGACAGTGGCGACCCCATGGTaGGCAGCTCCTTGCCATAAGGCCCGTAGAGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: ARWAAATVATPW*AAPCHKARRGG Trigger: GCCACCTCTACGGGCCTTATGGCAAGGAGCTGCCCACCATGGGGTCGCCACTGTCGCCGCTGCCCAGCGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS GCA 72 bp | GCGGCGACAGTGGCGACCCCATGGTGGGCAGCTCCTTaGCATAAGGCCCGTAGAGGTGGCCCACCGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: AATVATPWWAAP*HKARRGGPPRP Trigger: TGGCCTCGGTGGGCCACCTCTACGGGCCTTATGGCAAGGAGCTGCCCACCATGGGGTCGCCACTGTCGCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS CCA 72 bp | GCAGCGCGCTGGGCAGCGGCGACAGTGGCGACCCCATaGTGGGCAGCTCCTTGCCATAAGGCCCGTAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: AARWAAATVATP*WAAPCHKARRG Trigger: ACCTCTACGGGCCTTATGGCAAGGAGCTGCCCACCATGGGGTCGCCACTGTCGCCGCTGCCCAGCGCGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS CCA 72 bp | CAAGGGCGTGAGCGTGGTGTAGGTGCCACCCAAACCTaGGGCCTCGCACGCCATACCCATGGCCGGGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: QGRERGVGATQT*GLARHTHGRVQ Trigger: CTGCACCCGGCCATGGGTATGGCGTGCGAGGCCCCAGGTTTGGGTGGCACCTACACCACGCTCACGCCCTTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS CAA 72 bp | CAGCGTGCGGCGCTGCAGGTCTGTGAACACGAGGCGTaGCTTCTTCGGCTGCAGAGCCCTCTCCTTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: QRAALQVCEHEA*LLRLQSPLLLL Trigger: CAGCAGAAGGAGAGGGCTCTGCAGCCGAAGAAGCAACGCCTCGTGTTCACAGACCTGCAGCGCCGCACGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS CAA 90 bp | GATGGCAATCAGCGTGCGGCGCTGCAGGTCTGTGAACACGAGGCGTaGCTTCTTCGGCTGCAGAGCCCTCTCCTTCTGCTGATCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: DGNQRAALQVCEHEA*LLRLQSPLLLLILL Trigger: GAGCAGGATCAGCAGAAGGAGAGGGCTCTGCAGCCGAAGAAGCAACGCCTCGTGTTCACAGACCTGCAGCGCCGCACGCTGATTGCCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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| CDS TCA 72 bp | CGTTGCTTCTTCGGCTGCAGAGCCCTCTCCTTCTGCTaGTCCTGCTCTTTACGCTTGCAGGCTGCCAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RCFFGCRALSFC*SCSLRLQAARR Trigger: GCGCCTGGCAGCCTGCAAGCGTAAAGAGCAGGATCAGCAGAAGGAGAGGGCTCTGCAGCCGAAGAAGCAACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051773.9 |
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