Pregenerated sensors for ONECUT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043013Ensembl transcript IDs: ENSMUST00000056006.11
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGACGAAGCGTCTTATGTGAGACCGGACCTCTGGCTTCTTCTGTGTaGTTCTACCATTCTGCTGTTTCTCAGTGGCGCCTGCTGATTTCC | + |
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Preference number: 1 (lower is better) Translates to: GRSVLCETGPLASSV*FYHSAVSQWRLLIS Trigger: GGAAATCAGCAGGCGCCACTGAGAAACAGCAGAATGGTAGAACCACACAGAAGAAGCCAGAGGTCCGGTCTCACATAAGACGCTTCGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR GCA 90 bp | GGCGTGAGATCAGATGTTTTCCCCATCATCTTTCCTGCCGGGTCTTaGCCCGCTGAAGTATGTGTCTCTGAACAAAGTCAGAATGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: GVRSDVFPIIFPAGS*PAEVCVSEQSQNAG Trigger: ACCTGCATTCTGACTTTGTTCAGAGACACATACTTCAGCGGGGCAAGACCCGGCAGGAAAGATGATGGGGAAAACATCTGATCTCACGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR GCA 90 bp | CTGAAGACCAGCCCCGCCCGAGTCCCTAACCACTGTTGTTGTTGTTaGATGTGTGTATATGTGTGTACACACACACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: LKTSPARVPNHCCCC*MCVYVCTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTACACACATATACACACATGCAACAACAACAACAGTGGTTAGGGACTCGGGCGGGGCTGGTCTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR CCA 90 bp | AAATCACATCTCAGATCCAATGAACTTAGAAATCCCACACCGGGTTaGTCACACTCCTATGGTGCAACCCTTCCTGAAGACCAGCCCCGC | + |
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Preference number: 1 (lower is better) Translates to: KSHLRSNELRNPTPG*SHSYGATLPEDQPR Trigger: GCGGGGCTGGTCTTCAGGAAGGGTTGCACCATAGGAGTGTGACCAACCCGGTGTGGGATTTCTAAGTTCATTGGATCTGAGATGTGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR GCA 90 bp | TGGGTCCCACATGCATGGTGTCAGACTCTCTGTCATGATGGTAACTaGTTCCCTGAAGCCACGGTCTTCCTTGCCAGTTCTGAAAATTCA | + |
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Preference number: 1 (lower is better) Translates to: WVPHAWCQTLCHDGN*FPEATVFLASSENS Trigger: TGAATTTTCAGAACTGGCAAGGAAGACCGTGGCTTCAGGGAAGCAGTTACCATCATGACAGAGAGTCTGACACCATGCATGTGGGACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR CCA 90 bp | TATGTCTTTTCTGTGTGTAAGCGGCATTTATGGGTCCCACATGCATaGTGTCAGACTCTCTGTCATGATGGTAACTGCTTCCCTGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: YVFSVCKRHLWVPHA*CQTLCHDGNCFPEA Trigger: GGCTTCAGGGAAGCAGTTACCATCATGACAGAGAGTCTGACACCATGCATGTGGGACCCATAAATGCCGCTTACACACAGAAAAGACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR TCA 90 bp | ATCGGTTGTAGTTCAACTGAGTTCAGAGTGTTTCTGGGAGTCAAATaGTTGCTAGAACTTTGTTTTCTTTTCCTGCCTTGGTCTGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: IGCSSTEFRVFLGVK*LLELCFLFLPWSVH Trigger: ATGAACAGACCAAGGCAGGAAAAGAAAACAAAGTTCTAGCAATCATTTGACTCCCAGAAACACTCTGAACTCAGTTGAACTACAACCGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR TCA 90 bp | GTGCAGAACTTACTATCAATATTGCTTTTGGTGTTATCTTTCTATTaGGGTGCAATATTAACTGAGGGTCCCCCATTCTTGACCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: VQNLLSILLLVLSFY*GAILTEGPPFLTFL Trigger: CAGGAAGGTCAAGAATGGGGGACCCTCAGTTAATATTGCACCTCAATAGAAAGATAACACCAAAAGCAATATTGATAGTAAGTTCTGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR-3UTR TCA 90 bp | CATGCATGGTGTCAGACTCTCTGTCATGATGGTAACTGCTTCCCTGAAGCCACGAGCAGCCGAGCACAGTaGGGTGCAGGGGTTGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: HAWCQTLCHDGNCFPEATSSRAQ*GAGVEG Trigger: GCCTTCAACCCCTGCACCTCACTGTGCTCGGCTGCT...CGTGGCTTCAGGGAAGCAGTTACCATCATGACAGAGAGTCTGACACCATGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR-3UTR TCA 90 bp | AAATTTTTGATTAGGAAGCTTGGGACTCATTTCTATCCTAGCCCTGTCAGAGAGTGGTGCAACCCTTCCTaGAGACCAGCCCCGCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: KFLIRKLGTHFYPSPVREWCNPS*RPAPPE Trigger: CTCGGGCGGGGCTGGTCTTCAGGAAGGGTTGCACCA...CTCTCTGACAGGGCTAGGATAGAAATGAGTCCCAAGCTTCCTAATCAAAAATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATGCTTATACAGGGCCCTACTCTaGAAGGGTCCTCGCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: TRFIDSKKDCDLLWRRCLYRALL*KGPRIF Trigger: GAAGATGCGAGGACCCTTTCAGAGTAGGGCCCTGTA...TAAGCATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR-3UTR CCA 90 bp | AGCGGCATTTATGGGTCCCACATGCATGGTGTCAGACTCTCTGTCATGATGGTAAATCTATGTGGCATGTaGATTACAGCTAGATCAGTT | + |
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Preference number: 2 (lower is better) Translates to: SGIYGSHMHGVRLSVMMVNLCGM*ITARSV Trigger: AACTGATCTAGCTGTAATCCACATGCCACATAGATT...TACCATCATGACAGAGAGTCTGACACCATGCATGTGGGACCCATAAATGCCGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATGCTTAGCATCTTCTCAGCTGTaGGTAGATTATTCATTATGT | + |
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Preference number: 2 (lower is better) Translates to: TRFIDSKKDCDLLWRRCLASSQL*VDYSLC Trigger: ACATAATGAATAATCTACTCACAGCTGAGAAGATGC...TAAGCATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR-3UTR CCA 90 bp | AAATTACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATAGGATGTCCACTCAATaGCTCAAACATAACTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: KLPGSLIARRTVTCFGGDRMSTQ*LKHNCA Trigger: AGCACAGTTATGTTTGAGCCATTGAGTGGACATCCT...ATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR-3UTR CCA 90 bp | TTCATGATAGAACTGGAATTGTGCCATATTCCGAAGGAAAACTTTTTAAGTTGGTTAGGTTCCTGTCTCTaGGTCCTGAGATTTGACCCC | + |
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Preference number: 2 (lower is better) Translates to: FMIELELCHIPKENFLSWLGSCL*VLRFDP Trigger: GGGGTCAAATCTCAGGACCCAGAGACAGGAACCTAA...CCAACTTAAAAAGTTTTCCTTCGGAATATGGCACAATTCCAGTTCTATCATGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR-3UTR TCA 90 bp | AAATTTTTGATTAGGAAGCTTGGGACTCATTTCTATCCTAGCCCTGTCAGAGAGTGGGATAACGAACTGTaGTTAATATTGGCATGCTTG | + |
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Preference number: 2 (lower is better) Translates to: KFLIRKLGTHFYPSPVREWDNEL*LILACL Trigger: CAAGCATGCCAATATTAATCACAGTTCGTTATCCCA...CTCTCTGACAGGGCTAGGATAGAAATGAGTCCCAAGCTTCCTAATCAAAAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR-3UTR GCA 90 bp | TGGCTCTTCATGATAGAACTGGAATTGTGCCATATTCCGAAGGAAAACTTTTTAAACAAACAAAGAGAGTaGACTGGTTTAGGCGCCATT | + |
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Preference number: 2 (lower is better) Translates to: WLFMIELELCHIPKENFLNKQRE*TGLGAI Trigger: AATGGCGCCTAAACCAGTGCACTCTCTTTGTTTGTT...TAAAAAGTTTTCCTTCGGAATATGGCACAATTCCAGTTCTATCATGAAGAGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR-3UTR CCA 90 bp | TGGCTCTTCATGATAGAACTGGAATTGTGCCATATTCCGAAGGAAAACTTTTTATTTCTTTTCCTGCCTTaGTCTGTTCATCCCCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: WLFMIELELCHIPKENFLFLFLP*SVHPQL Trigger: TAACTGGGGATGAACAGACCAAGGCAGGAAAAGAAA...TAAAAAGTTTTCCTTCGGAATATGGCACAATTCCAGTTCTATCATGAAGAGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR CAA 90 bp | GTATGTGTCTCTGAACAAAGTCAGAATGCAGGTGAGCTTCAGTCTTaGGTTTCTTTGGACTATAAATACCACTTGTTTTTCTTCAAATAT | + |
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Preference number: 2 (lower is better) Translates to: VCVSEQSQNAGELQS*VSLDYKYHLFFFKY Trigger: ATATTTGAAGAAAAACAAGTGGTATTTATAGTCCAAAGAAACCAAAGACTGAAGCTCACCTGCATTCTGACTTTGTTCAGAGACACATAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR-3UTR CCA 90 bp | TTCATGATAGAACTGGAATTGTGCCATATTCCGAAGGAAAACTTTTTAAGTTGGGTAAAACACCTGAAATaGCCAATAAGTCAGTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: FMIELELCHIPKENFLSWVKHLK*PISQFK Trigger: TTTGAACTGACTTATTGGCCATTTCAGGTGTTTTAC...CCAACTTAAAAAGTTTTCCTTCGGAATATGGCACAATTCCAGTTCTATCATGAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR CCA 72 bp | GTCTTATGTGAGACCGGACCTCTGGCTTCTTCTGTGTaGTTCTACCATTCTGCTGTTTCTCAGTGGCGCCTG | + |
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Preference number: 3 (lower is better) Translates to: VLCETGPLASSV*FYHSAVSQWRL Trigger: CAGGCGCCACTGAGAAACAGCAGAATGGTAGAACCACACAGAAGAAGCCAGAGGTCCGGTCTCACATAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR-3UTR CAA 90 bp | CCTATGGTGCAACCCTTCCTGAAGACCAGCCCCGCCCGAGTCCCTAACCACTGTGGTGAGCTTCAGTCTTaGGTTTCTTTGGACTATAAA | + |
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Preference number: 3 (lower is better) Translates to: PMVQPFLKTSPARVPNHCGELQS*VSLDYK Trigger: TTTATAGTCCAAAGAAACCAAAGACTGAAGCTCACC...ACAGTGGTTAGGGACTCGGGCGGGGCTGGTCTTCAGGAAGGGTTGCACCATAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR GCA 72 bp | CGGACCTCTGGCTTCTTCTGTGTGGTTCTACCATTCTaGTGTTTCTCAGTGGCGCCTGCTGATTTCCTAACA | + |
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Preference number: 3 (lower is better) Translates to: RTSGFFCVVLPF*CFSVAPADFLT Trigger: TGTTAGGAAATCAGCAGGCGCCACTGAGAAACAGCAGAATGGTAGAACCACACAGAAGAAGCCAGAGGTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR CCA 72 bp | CTCAGATCCAATGAACTTAGAAATCCCACACCGGGTTaGTCACACTCCTATGGTGCAACCCTTCCTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: LRSNELRNPTPG*SHSYGATLPED Trigger: GTCTTCAGGAAGGGTTGCACCATAGGAGTGTGACCAACCCGGTGTGGGATTTCTAAGTTCATTGGATCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR TCA 72 bp | AAACATGTCAAGCCATTTCCTTCGCTCAATCAACAGTaGACAGGAAGGGGATGGATGGTCCACTGGTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: KHVKPFPSLNQQ*TGRGWMVHWSA Trigger: AGCTGACCAGTGGACCATCCATCCCCTTCCTGTTCACTGTTGATTGAGCGAAGGAAATGGCTTGACATGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR-3UTR CAA 90 bp | GACCTCTGGCTTCTTCTGTGTGGTTCTACCATTCTGCTGTTTCTCAGTGGCGCCCAGTCTTTGGTTTCTTaGGACTATAAATACCACTTG | + |
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Preference number: 3 (lower is better) Translates to: DLWLLLCGSTILLFLSGAQSLVS*DYKYHL Trigger: CAAGTGGTATTTATAGTCCAAAGAAACCAAAGACTG...GGCGCCACTGAGAAACAGCAGAATGGTAGAACCACACAGAAGAAGCCAGAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR-3UTR CAA 90 bp | AAATTACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATGACTCTGCATTTAGGTaGTGGGCCTGGCAGGTTCAA | + |
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Preference number: 3 (lower is better) Translates to: KLPGSLIARRTVTCFGGDDSAFR*WAWQVQ Trigger: TTGAACCTGCCAGGCCCACAACCTAAATGCAGAGTC...ATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR TCA 72 bp | GAGTCCTTTAATTCTGAAAGGACGAAGCGTCTTATGTaGGACCGGACCTCTGGCTTCTTCTGTGTGGTTCTA | + |
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Preference number: 3 (lower is better) Translates to: ESFNSERTKRLM*DRTSGFFCVVL Trigger: TAGAACCACACAGAAGAAGCCAGAGGTCCGGTCTCACATAAGACGCTTCGTCCTTTCAGAATTAAAGGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR TCA 72 bp | GGTCAGCTTAGGTTCCTGTCTCTGGGTCCTGAGATTTaGCCCCAAGGAGTGAGATTTTGTGTTATAAATTTT | + |
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Preference number: 3 (lower is better) Translates to: GQLRFLSLGPEI*PQGVRFCVINF Trigger: AAAATTTATAACACAAAATCTCACTCCTTGGGGTCAAATCTCAGGACCCAGAGACAGGAACCTAAGCTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| 3UTR-3UTR CAA 90 bp | ACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATGCTTATATAAACCTGCTATCTaGAGGTCCTGGTCTTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: TRFIDSKKDCDLLWRRCLYKPAI*RSWSLK Trigger: TTTTAAAGACCAGGACCTCAAGATAGCAGGTTTATA...TAAGCATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CCA 90 bp | CCTATGGTGCAACCCTTCCTGAAGACCAGCCCCGCCCGAGTCCCTAACCACTGTCGGTCACCGAAGGGTTaGGCTCTCGGGCTGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PMVQPFLKTSPARVPNHCRSPKG*ALGLCP Trigger: TGGGCACAGCCCGAGAGCCCAACCCTTCGGTGACCG...ACAGTGGTTAGGGACTCGGGCGGGGCTGGTCTTCAGGAAGGGTTGCACCATAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR GCA 90 bp | CCTATGGTGCAACCCTTCCTGAAGACCAGCCCCGCCCGAGTCCCTAACCACTGTAACTACCGCTCACGTTaGCCGCCAGGCGCTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: PMVQPFLKTSPARVPNHCNYRSR*PPGAGG Trigger: ACCACCAGCGCCTGGCGGGCAACGTGAGCGGTAGTT...ACAGTGGTTAGGGACTCGGGCGGGGCTGGTCTTCAGGAAGGGTTGCACCATAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR TCA 90 bp | CCTATGGTGCAACCCTTCCTGAAGACCAGCCCCGCCCGAGTCCCTAACCACTGTCCTTGCTGGGAGTTGTaGATGCTGCCCAGACCGGAG | + |
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Preference number: 4 (lower is better) Translates to: PMVQPFLKTSPARVPNHCPCWEL*MLPRPE Trigger: CTCCGGTCTGGGCAGCATTCACAACTCCCAGCAAGG...ACAGTGGTTAGGGACTCGGGCGGGGCTGGTCTTCAGGAAGGGTTGCACCATAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR GCA 90 bp | GGTCTTGCCCCGCTGAAGTATGTGTCTCTGAACAAAGTCAGAATGCAGGTGAGCGGTGTCCCACGGAGCTaGGCGCGTGAGGGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GLAPLKYVSLNKVRMQVSGVPRS*AREGCR Trigger: GCGGCAGCCCTCACGCGCGCAGCTCCGTGGGACACC...GCTCACCTGCATTCTGACTTTGTTCAGAGACACATACTTCAGCGGGGCAAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CCA 90 bp | CATGCATGGTGTCAGACTCTCTGTCATGATGGTAACTGCTTCCCTGAAGCCACGTGCGCGGGAGGCAGGTaGCTGCCGCGGTGTCCCACG | + |
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Preference number: 4 (lower is better) Translates to: HAWCQTLCHDGNCFPEATCAGGR*LPRCPT Trigger: CGTGGGACACCGCGGCAGCCACCTGCCTCCCGCGCA...CGTGGCTTCAGGGAAGCAGTTACCATCATGACAGAGAGTCTGACACCATGCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR TCA 90 bp | GACCTCTGGCTTCTTCTGTGTGGTTCTACCATTCTGCTGTTTCTCAGTGGCGCCGCGGAGGAAGGCCGTTaGTGGGTACCATGCCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: DLWLLLCGSTILLFLSGAAEEGR*WVPCRP Trigger: CGGCCGGCATGGTACCCATCAACGGCCTTCCTCCGC...GGCGCCACTGAGAAACAGCAGAATGGTAGAACCACACAGAAGAAGCCAGAGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR GCA 90 bp | GACCTCTGGCTTCTTCTGTGTGGTTCTACCATTCTGCTGTTTCTCAGTGGCGCCGGTGGTGGTAATCGCTaGCTCCGCTGCCGCCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: DLWLLLCGSTILLFLSGAGGGNR*LRCRRP Trigger: TGGACGGCGGCAGCGGAGGCAGCGATTACCACCACC...GGCGCCACTGAGAAACAGCAGAATGGTAGAACCACACAGAAGAAGCCAGAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR GCA 90 bp | GTTGTGGGCCTGGCAGGTTCAAACGCTAGGCTAGATGAGAGAAATCACATCTCAGTGGGCGTGAGGTGCTaGTCCCCGTGGCGACCGAGC | + |
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Preference number: 4 (lower is better) Translates to: VVGLAGSNARLDERNHISVGVRC*SPWRPS Trigger: GCTCGGTCGCCACGGGGAGCAGCACCTCACGCCCAC...TGAGATGTGATTTCTCTCATCTAGCCTAGCGTTTGAACCTGCCAGGCCCACAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CCA 90 bp | AGCGGCATTTATGGGTCCCACATGCATGGTGTCAGACTCTCTGTCATGATGGTACCCGCCAGGCGCTGGTaGTGGTGTGGGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SGIYGSHMHGVRLSVMMVPARRW*WCGWWW Trigger: CCACCACCACCCACACCACCACCAGCGCCTGGCGGG...TACCATCATGACAGAGAGTCTGACACCATGCATGTGGGACCCATAAATGCCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CCA 90 bp | CCTATGGTGCAACCCTTCCTGAAGACCAGCCCCGCCCGAGTCCCTAACCACTGTAGCATGGCAGGGTGGTaGGCTTCAAAGCCATTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PMVQPFLKTSPARVPNHCSMAGW*ASKPFG Trigger: CCCAAATGGCTTTGAAGCCCACCACCCTGCCATGCT...ACAGTGGTTAGGGACTCGGGCGGGGCTGGTCTTCAGGAAGGGTTGCACCATAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CCA 90 bp | GGTCTTGCCCCGCTGAAGTATGTGTCTCTGAACAAAGTCAGAATGCAGGTGAGCAGGTGCTGCTCCCCGTaGCGACCGAGCATGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GLAPLKYVSLNKVRMQVSRCCSP*RPSMAG Trigger: CCCTGCCATGCTCGGTCGCCACGGGGAGCAGCACCT...GCTCACCTGCATTCTGACTTTGTTCAGAGACACATACTTCAGCGGGGCAAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR GCA 90 bp | ATTCAAATGTTCTCTGCTGGGTTTGACTCTGCATTTAGGTTGTGGGCCTGGCAGTGCGCGCGTGAGGGCTaGCGCCCAGCAGGTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: IQMFSAGFDSAFRLWAWQCAREG*RPAGQQ Trigger: CTGCTGACCTGCTGGGCGGCAGCCCTCACGCGCGCA...CTGCCAGGCCCACAACCTAAATGCAGAGTCAAACCCAGCAGAGAACATTTGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR GCA 90 bp | GTTGTGGGCCTGGCAGGTTCAAACGCTAGGCTAGATGAGAGAAATCACATCTCATGGGCTCTCGGGCTGTaGCCAGGAGCTGTCCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: VVGLAGSNARLDERNHISWALGL*PGAVRG Trigger: GCCACGGACAGCTCCTGGGCACAGCCCGAGAGCCCA...TGAGATGTGATTTCTCTCATCTAGCCTAGCGTTTGAACCTGCCAGGCCCACAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR GCA 90 bp | CATGCATGGTGTCAGACTCTCTGTCATGATGGTAACTGCTTCCCTGAAGCCACGATGGTCATGGTGGGGTaGAGGGGGCCAGCCAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: HAWCQTLCHDGNCFPEATMVMVG*RGPAKL Trigger: CAGCTTGGCTGGCCCCCTGCACCCCACCATGACCAT...CGTGGCTTCAGGGAAGCAGTTACCATCATGACAGAGAGTCTGACACCATGCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CCA 90 bp | ATTCAAATGTTCTCTGCTGGGTTTGACTCTGCATTTAGGTTGTGGGCCTGGCAGCACAGGCCATGGTCATaGTGGGGTGCAGGGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: IQMFSAGFDSAFRLWAWQHRPWS*WGAGGQ Trigger: CTGGCCCCCTGCACCCCACCATGACCATGGCCTGTG...CTGCCAGGCCCACAACCTAAATGCAGAGTCAAACCCAGCAGAGAACATTTGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR GCA 90 bp | AAATTACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATCCCATGGAACGCGGGTaGGCGGGAGGCAGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KLPGSLIARRTVTCFGGDPMERG*AGGRWL Trigger: CAGCCACCTGCCTCCCGCGCACCCGCGTTCCATGGG...ATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR GCA 90 bp | GGTCTTGCCCCGCTGAAGTATGTGTCTCTGAACAAAGTCAGAATGCAGGTGAGCGGGAGTTGTGAATGCTaGCCAGACCGGAGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLAPLKYVSLNKVRMQVSGSCEC*PDRSQR Trigger: TCTCTGGCTCCGGTCTGGGCAGCATTCACAACTCCC...GCTCACCTGCATTCTGACTTTGTTCAGAGACACATACTTCAGCGGGGCAAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CCA 90 bp | ATTCAAATGTTCTCTGCTGGGTTTGACTCTGCATTTAGGTTGTGGGCCTGGCAGCGTGGCGACCGAGCATaGCAGGGTGGTGGGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IQMFSAGFDSAFRLWAWQRGDRA*QGGGLQ Trigger: TTGAAGCCCACCACCCTGCCATGCTCGGTCGCCACG...CTGCCAGGCCCACAACCTAAATGCAGAGTCAAACCCAGCAGAGAACATTTGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CCA 90 bp | GTTGTGGGCCTGGCAGGTTCAAACGCTAGGCTAGATGAGAGAAATCACATCTCAATGAACTGCCTGAGTTaGAGCCGCCCTCGTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VVGLAGSNARLDERNHISMNCLS*SRPRPA Trigger: GGCAGGACGAGGGCGGCTCCAACTCAGGCAGTTCAT...TGAGATGTGATTTCTCTCATCTAGCCTAGCGTTTGAACCTGCCAGGCCCACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR TCA 90 bp | TGGCTCTTCATGATAGAACTGGAATTGTGCCATATTCCGAAGGAAAACTTTTTACGGCCGAGGTGGGCGTaGGGTGCTGCTCCCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WLFMIELELCHIPKENFLRPRWA*GAAPRG Trigger: GCCACGGGGAGCAGCACCTCACGCCCACCTCGGCCG...TAAAAAGTTTTCCTTCGGAATATGGCACAATTCCAGTTCTATCATGAAGAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR GCA 90 bp | AGAAACCATGTGGTAAAATTACCAGGTTCATTGATAGCAAGAAGGACTGTGACTCGGGAGGCAGGTGGCTaGCGCGGTGTCCCACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RNHVVKLPGSLIARRTVTREAGG*RGVPRS Trigger: GCTCCGTGGGACACCGCGGCAGCCACCTGCCTCCCG...AGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTTTACCACATGGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR GCA 90 bp | AAATTACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATCCAGCAGGGACGCCATaGCCATGGAACGCGGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLPGSLIARRTVTCFGGDPAGTP*PWNAGA Trigger: CGCACCCGCGTTCCATGGGCATGGCGTCCCTGCTGG...ATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR GCA 90 bp | ATTCAAATGTTCTCTGCTGGGTTTGACTCTGCATTTAGGTTGTGGGCCTGGCAGGCTGGGAGTTGTGAATaGTGCCCAGACCGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IQMFSAGFDSAFRLWAWQAGSCE*CPDRSQ Trigger: CTGGCTCCGGTCTGGGCAGCATTCACAACTCCCAGC...CTGCCAGGCCCACAACCTAAATGCAGAGTCAAACCCAGCAGAGAACATTTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR GCA 90 bp | AAATTTTTGATTAGGAAGCTTGGGACTCATTTCTATCCTAGCCCTGTCAGAGAGGAGGTGGGCGTGAGGTaGTGCTCCCCGTGGCGACCG | + |
|
Preference number: 4 (lower is better) Translates to: KFLIRKLGTHFYPSPVREEVGVR*CSPWRP Trigger: CGGTCGCCACGGGGAGCAGCACCTCACGCCCACCTC...CTCTCTGACAGGGCTAGGATAGAAATGAGTCCCAAGCTTCCTAATCAAAAATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR CCA 90 bp | GACCTCTGGCTTCTTCTGTGTGGTTCTACCATTCTGCTGTTTCTCAGTGGCGCCCGCGAAGATGGCCTGTaGGATGCTGTAACGTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLWLLLCGSTILLFLSGAREDGL*DAVTFE Trigger: CTCAAACGTTACAGCATCCCACAGGCCATCTTCGCG...GGCGCCACTGAGAAACAGCAGAATGGTAGAACCACACAGAAGAAGCCAGAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR TCA 90 bp | TTCATGATAGAACTGGAATTGTGCCATATTCCGAAGGAAAACTTTTTAAGTTGGACGGAGCTGCGCGCGTaGGGGCTGCCGCCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FMIELELCHIPKENFLSWTELRA*GLPPSR Trigger: CCTGCTGGGCGGCAGCCCTCACGCGCGCAGCTCCGT...CCAACTTAAAAAGTTTTCCTTCGGAATATGGCACAATTCCAGTTCTATCATGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR GCA 90 bp | ACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATGCTTAAGAGGCTCTGGCCCATaGCAGCCACGTCCTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRFIDSKKDCDLLWRRCLRGSGP*QPRPCG Trigger: ACCACAAGGACGTGGCTGGCATGGGCCAGAGCCTCT...TAAGCATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR CCA 90 bp | AAATTACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATAGGCCATGGTCATGGTaGGGTGCAGGGGGCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLPGSLIARRTVTCFGGDRPWSW*GAGGQP Trigger: TGGCTGGCCCCCTGCACCCCACCATGACCATGGCCT...ATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR CCA 90 bp | ATTCAAATGTTCTCTGCTGGGTTTGACTCTGCATTTAGGTTGTGGGCCTGGCAGCCGAGCATGGCAGGGTaGTGGGCTTCAAAGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: IQMFSAGFDSAFRLWAWQPSMAG*WASKPF Trigger: AAATGGCTTTGAAGCCCACCACCCTGCCATGCTCGG...CTGCCAGGCCCACAACCTAAATGCAGAGTCAAACCCAGCAGAGAACATTTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR TCA 90 bp | AAATTACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATTCTCCCGACCCGACTTaGGTTTGCTCCAGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLPGSLIARRTVTCFGGDSPDPT*VCSRAW Trigger: CCAAGCCCTGGAGCAAACTCAAGTCGGGTCGGGAGA...ATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR GCA 90 bp | AAATTTTTGATTAGGAAGCTTGGGACTCATTTCTATCCTAGCCCTGTCAGAGAGCTTCCATTGCTGACCTaGGCGCCGGTCACCGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KFLIRKLGTHFYPSPVRELPLLT*APVTEG Trigger: CCCTTCGGTGACCGGCGCGCAGGTCAGCAATGGAAG...CTCTCTGACAGGGCTAGGATAGAAATGAGTCCCAAGCTTCCTAATCAAAAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR GCA 90 bp | AGAAACCATGTGGTAAAATTACCAGGTTCATTGATAGCAAGAAGGACTGTGACTCGGCAGAGCACCCTCTaGGCGAAGATGGCCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RNHVVKLPGSLIARRTVTRQSTL*AKMACG Trigger: CCCACAGGCCATCTTCGCGCAGAGGGTGCTCTGCCG...AGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTTTACCACATGGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR GCA 90 bp | GTTGTGGGCCTGGCAGGTTCAAACGCTAGGCTAGATGAGAGAAATCACATCTCATCCTTCCCGTGTTCTTaGTCTTTCCGTTTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVGLAGSNARLDERNHISSFPCS*SFRLQA Trigger: AGCCTGCAAACGGAAAGAGCAAGAACACGGGAAGGA...TGAGATGTGATTTCTCTCATCTAGCCTAGCGTTTGAACCTGCCAGGCCCACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR CCA 90 bp | CAGTGCAGAACTTACTATCAATATTGCTTTTGGTGTTATCTTTCTATTGAGGTGGCGGGCACCGGCTCATaGCTCACCCCGTGCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QCRTYYQYCFWCYLSIEVAGTGS*LTPCSS Trigger: CGAGCTGCACGGGGTGAGCCATGAGCCGGTGCCCGC...CACCTCAATAGAAAGATAACACCAAAAGCAATATTGATAGTAAGTTCTGCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CCA 90 bp | CAGTGCAGAACTTACTATCAATATTGCTTTTGGTGTTATCTTTCTATTGAGGTGGGGACGCCATGCCCATaGAACGCGGGTGCGCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QCRTYYQYCFWCYLSIEVGTPCP*NAGARE Trigger: CTCCCGCGCACCCGCGTTCCATGGGCATGGCGTCCC...CACCTCAATAGAAAGATAACACCAAAAGCAATATTGATAGTAAGTTCTGCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR TCA 90 bp | AGCGGCATTTATGGGTCCCACATGCATGGTGTCAGACTCTCTGTCATGATGGTAGCTGCTGGGAGATGGTaGTTTGTAATTCTTTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SGIYGSHMHGVRLSVMMVAAGRW*FVILWT Trigger: CGTCCAAAGAATTACAAATCACCATCTCCCAGCAGC...TACCATCATGACAGAGAGTCTGACACCATGCATGTGGGACCCATAAATGCCGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR CCA 90 bp | TTCATGATAGAACTGGAATTGTGCCATATTCCGAAGGAAAACTTTTTAAGTTGGAGGGGCGAGAGGCTCTaGCCCATGCCAGCCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FMIELELCHIPKENFLSWRGERL*PMPATS Trigger: GGACGTGGCTGGCATGGGCCAGAGCCTCTCGCCCCT...CCAACTTAAAAAGTTTTCCTTCGGAATATGGCACAATTCCAGTTCTATCATGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR CCA 90 bp | ATTCAAATGTTCTCTGCTGGGTTTGACTCTGCATTTAGGTTGTGGGCCTGGCAGTGTAGAGTTCGACGTTaGACGTCTGTGAAGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IQMFSAGFDSAFRLWAWQCRVRR*TSVKTS Trigger: GCTGGTCTTCACAGACGTCCAACGTCGAACTCTACA...CTGCCAGGCCCACAACCTAAATGCAGAGTCAAACCCAGCAGAGAACATTTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR GCA 90 bp | CAGTGCAGAACTTACTATCAATATTGCTTTTGGTGTTATCTTTCTATTGAGGTGTCATGGCTCACCCCGTaGAGCTCGCCGATCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QCRTYYQYCFWCYLSIEVSWLTP*SSPIAS Trigger: GGAGGCGATCGGCGAGCTGCACGGGGTGAGCCATGA...CACCTCAATAGAAAGATAACACCAAAAGCAATATTGATAGTAAGTTCTGCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR TCA 90 bp | AGAAACCATGTGGTAAAATTACCAGGTTCATTGATAGCAAGAAGGACTGTGACTAATTACTTCCATTGCTaGCCTGCGCGCCGGTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RNHVVKLPGSLIARRTVTNYFHC*PARRSP Trigger: CGGTGACCGGCGCGCAGGTCAGCAATGGAAGTAATT...AGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTTTACCACATGGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR TCA 90 bp | AAATTTTTGATTAGGAAGCTTGGGACTCATTTCTATCCTAGCCCTGTCAGAGAGGACGTTGGACGTCTGTaGAGACCAGCCTGGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KFLIRKLGTHFYPSPVREDVGRL*RPAWAF Trigger: AAAAGCCCAGGCTGGTCTTCACAGACGTCCAACGTC...CTCTCTGACAGGGCTAGGATAGAAATGAGTCCCAAGCTTCCTAATCAAAAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR GCA 90 bp | AAATTACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATTGTAGGTGGTGGGCATaGTCATACCTGGGGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLPGSLIARRTVTCFGGDCRWWA*SYLGEF Trigger: AAACTCCCCCAGGTATGAGCATGCCCACCACCTACA...ATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR GCA 90 bp | CAGTGCAGAACTTACTATCAATATTGCTTTTGGTGTTATCTTTCTATTGAGGTGGAGCCGCCCTCGTCCTaGCACTTGTCCAGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QCRTYYQYCFWCYLSIEVEPPSS*HLSRLL Trigger: GAGGAGTCTGGACAAGTGGCAGGACGAGGGCGGCTC...CACCTCAATAGAAAGATAACACCAAAAGCAATATTGATAGTAAGTTCTGCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CCA 90 bp | TTCATGATAGAACTGGAATTGTGCCATATTCCGAAGGAAAACTTTTTAAGTTGGTCCGAAAGGGTCCCCTaGGAACGGCAGAGCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FMIELELCHIPKENFLSWSERVP*ERQSTL Trigger: GAGGGTGCTCTGCCGTTCCCAGGGGACCCTTTCGGA...CCAACTTAAAAAGTTTTCCTTCGGAATATGGCACAATTCCAGTTCTATCATGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR TCA 90 bp | AGAAACCATGTGGTAAAATTACCAGGTTCATTGATAGCAAGAAGGACTGTGACTCAAAGCCATTTGGGGTaGGCATCTTGTCGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RNHVVKLPGSLIARRTVTQSHLG*ASCRWA Trigger: TGCCCACCGACAAGATGCTCACCCCAAATGGCTTTG...AGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTTTACCACATGGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR TCA 90 bp | TTCATGATAGAACTGGAATTGTGCCATATTCCGAAGGAAAACTTTTTAAGTTGGGCATTCAGGTGGGCATaGGGATGGTGCGGAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FMIELELCHIPKENFLSWAFRWA*GWCGGR Trigger: CCTTCCTCCGCACCATCCTCATGCCCACCTGAATGC...CCAACTTAAAAAGTTTTCCTTCGGAATATGGCACAATTCCAGTTCTATCATGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR GCA 90 bp | AAATTTTTGATTAGGAAGCTTGGGACTCATTTCTATCCTAGCCCTGTCAGAGAGGCTTTTTGGGGGTGTTaGCTCTGTCCTTCCCGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KFLIRKLGTHFYPSPVREAFWGC*LCPSRV Trigger: AACACGGGAAGGACAGAGGCAACACCCCCAAAAAGC...CTCTCTGACAGGGCTAGGATAGAAATGAGTCCCAAGCTTCCTAATCAAAAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR TCA 90 bp | AAATTACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATCTCTTCCATCTGCCCTaGATTACTTCCATTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KLPGSLIARRTVTCFGGDLFHLP*ITSIAD Trigger: GTCAGCAATGGAAGTAATTCAGGGCAGATGGAAGAG...ATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CCA 90 bp | CAGTGCAGAACTTACTATCAATATTGCTTTTGGTGTTATCTTTCTATTGAGGTGGGGCATGCTCATACCTaGGGGAGTTTCACAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QCRTYYQYCFWCYLSIEVGHAHT*GSFTGH Trigger: ATGGCCTGTGAAACTCCCCCAGGTATGAGCATGCCC...CACCTCAATAGAAAGATAACACCAAAAGCAATATTGATAGTAAGTTCTGCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| 3UTR CAA 72 bp | GAGAGTAGAAACCATGTGGTAAAATTACCAGGTTCATaGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ESRNHVVKLPGS*IARRTVTCFGG Trigger: GCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTTTACCACATGGTTTCTACTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR CCA 90 bp | AGAAACCATGTGGTAAAATTACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTCCAACCCCAGCTGCTaGGAGATGGTGATTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RNHVVKLPGSLIARRTVTSNPSC*EMVICN Trigger: ATTACAAATCACCATCTCCCAGCAGCTGGGGTTGGA...AGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTTTACCACATGGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CCA 90 bp | TTCATGATAGAACTGGAATTGTGCCATATTCCGAAGGAAAACTTTTTAAGTTGGGGCTTCAAAGCCATTTaGGGTGAGCATCTTGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: FMIELELCHIPKENFLSWGFKAI*GEHLVG Trigger: ACCGACAAGATGCTCACCCCAAATGGCTTTGAAGCC...CCAACTTAAAAAGTTTTCCTTCGGAATATGGCACAATTCCAGTTCTATCATGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS-3UTR GCA 90 bp | TTCATGATAGAACTGGAATTGTGCCATATTCCGAAGGAAAACTTTTTAAGTTGGATGCTTTGGTACAAGTaGTCGATGAGGACGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FMIELELCHIPKENFLSWMLWYK*SMRTMN Trigger: GTTCATCGTCCTCATCGAGCACTTGTACCAAAGCAT...CCAACTTAAAAAGTTTTCCTTCGGAATATGGCACAATTCCAGTTCTATCATGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| 3UTR CAA 72 bp | TCTGAACAAAGTCAGAATGCAGGTGAGCTTCAGTCTTaGGTTTCTTTGGACTATAAATACCACTTGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SEQSQNAGELQS*VSLDYKYHLFF Trigger: GAAAAACAAGTGGTATTTATAGTCCAAAGAAACCAAAGACTGAAGCTCACCTGCATTCTGACTTTGTTCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS GCA 90 bp | GCGGGTGCGCGGGAGGCAGGTGGCTGCCGCGGTGTCCCACGGAGCTaGGCGCGTGAGGGCTGCCGCCCAGCAGGTCAGCAGGGGCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGAREAGGCRGVPRS*AREGCRPAGQQGRA Trigger: TGCCCGCCCCTGCTGACCTGCTGGGCGGCAGCCCTCACGCGCGCAGCTCCGTGGGACACCGCGGCAGCCACCTGCCTCCCGCGCACCCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS TCA 90 bp | GCGGGAGGCAGGTGGCTGCCGCGGTGTCCCACGGAGCTGCGCGCGTaGGGGCTGCCGCCCAGCAGGTCAGCAGGGGCGGGCACCGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGGRWLPRCPTELRA*GLPPSRSAGAGTGS Trigger: TGAGCCGGTGCCCGCCCCTGCTGACCTGCTGGGCGGCAGCCCTCACGCGCGCAGCTCCGTGGGACACCGCGGCAGCCACCTGCCTCCCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS GCA 90 bp | GGGACGCCATGCCCATGGAACGCGGGTGCGCGGGAGGCAGGTGGCTaGCGCGGTGTCCCACGGAGCTGCGCGCGTGAGGGCTGCCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTPCPWNAGAREAGG*RGVPRSCAREGCRP Trigger: TGGGCGGCAGCCCTCACGCGCGCAGCTCCGTGGGACACCGCGGCAGCCACCTGCCTCCCGCGCACCCGCGTTCCATGGGCATGGCGTCCC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS GCA 90 bp | CCGCTGCCGCCGTCCAGCAGGGACGCCATGCCCATGGAACGCGGGTaGGCGGGAGGCAGGTGGCTGCCGCGGTGTCCCACGGAGCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PLPPSSRDAMPMERG*AGGRWLPRCPTELR Trigger: GCGCAGCTCCGTGGGACACCGCGGCAGCCACCTGCCTCCCGCGCACCCGCGTTCCATGGGCATGGCGTCCCTGCTGGACGGCGGCAGCGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS GCA 90 bp | GCAGGTGGCTGCCGCGGTGTCCCACGGAGCTGCGCGCGTGAGGGCTaGCGCCCAGCAGGTCAGCAGGGGCGGGCACCGGCTCATGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGGCRGVPRSCAREG*RPAGQQGRAPAHGS Trigger: TGAGCCATGAGCCGGTGCCCGCCCCTGCTGACCTGCTGGGCGGCAGCCCTCACGCGCGCAGCTCCGTGGGACACCGCGGCAGCCACCTGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS GCA 90 bp | GGTGGTAATCGCTGCCTCCGCTGCCGCCGTCCAGCAGGGACGCCATaGCCATGGAACGCGGGTGCGCGGGAGGCAGGTGGCTGCCGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GGNRCLRCRRPAGTP*PWNAGAREAGGCRG Trigger: ACCGCGGCAGCCACCTGCCTCCCGCGCACCCGCGTTCCATGGGCATGGCGTCCCTGCTGGACGGCGGCAGCGGAGGCAGCGATTACCACC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS CCA 90 bp | AATCGCTGCCTCCGCTGCCGCCGTCCAGCAGGGACGCCATGCCCATaGAACGCGGGTGCGCGGGAGGCAGGTGGCTGCCGCGGTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NRCLRCRRPAGTPCP*NAGAREAGGCRGVP Trigger: TGGGACACCGCGGCAGCCACCTGCCTCCCGCGCACCCGCGTTCCATGGGCATGGCGTCCCTGCTGGACGGCGGCAGCGGAGGCAGCGATT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS GCA 90 bp | TGTGCTCAGGGGCGCGGTGGTGGTGGTGGTAATCGCTGCCTCCGCTaGCGCCGTCCAGCAGGGACGCCATGCCCATGGAACGCGGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: CAQGRGGGGGNRCLR*RRPAGTPCPWNAGA Trigger: CGCACCCGCGTTCCATGGGCATGGCGTCCCTGCTGGACGGCGGCAGCGGAGGCAGCGATTACCACCACCACCACCGCGCCCCTGAGCACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
||
| CDS GCA 90 bp | CAGCCAAGCTGTGCTCAGGGGCGCGGTGGTGGTGGTGGTAATCGCTaGCTCCGCTGCCGCCGTCCAGCAGGGACGCCATGCCCATGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QPSCAQGRGGGGGNR*LRCRRPAGTPCPWN Trigger: GTTCCATGGGCATGGCGTCCCTGCTGGACGGCGGCAGCGGAGGCAGCGATTACCACCACCACCACCGCGCCCCTGAGCACAGCTTGGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CCA 90 bp | CCCGTGGCGACCGAGCATGGCAGGGTGGTGGGCTTCAAAGCCATTTaGGGTGAGCATCTTGTCGGTGGGCATAGCCGCGCCGGGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PVATEHGRVVGFKAI*GEHLVGGHSRAGMS Trigger: GCTCATCCCGGCGCGGCTATGCCCACCGACAAGATGCTCACCCCAAATGGCTTTGAAGCCCACCACCCTGCCATGCTCGGTCGCCACGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CCA 90 bp | GTGGGCGTGAGGTGCTGCTCCCCGTGGCGACCGAGCATGGCAGGGTaGTGGGCTTCAAAGCCATTTGGGGTGAGCATCTTGTCGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VGVRCCSPWRPSMAG*WASKPFGVSILSVG Trigger: GCCCACCGACAAGATGCTCACCCCAAATGGCTTTGAAGCCCACCACCCTGCCATGCTCGGTCGCCACGGGGAGCAGCACCTCACGCCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS GCA 90 bp | CGGGATGAGCATAGTGGGGAAGTCCTTGCTGGGAGTTGTGAATGCTaGCCAGACCGGAGCCAGAGAGGGGCGAGAGGCTCTGGCCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: RDEHSGEVLAGSCEC*PDRSQRGARGSGPC Trigger: GCATGGGCCAGAGCCTCTCGCCCCTCTCTGGCTCCGGTCTGGGCAGCATTCACAACTCCCAGCAAGGACTTCCCCACTATGCTCATCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CCA 90 bp | GGCGTGAGGTGCTGCTCCCCGTGGCGACCGAGCATGGCAGGGTGGTaGGCTTCAAAGCCATTTGGGGTGAGCATCTTGTCGGTGGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: GVRCCSPWRPSMAGW*ASKPFGVSILSVGI Trigger: TATGCCCACCGACAAGATGCTCACCCCAAATGGCTTTGAAGCCCACCACCCTGCCATGCTCGGTCGCCACGGGGAGCAGCACCTCACGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CCA 90 bp | TGTGAAACTACCGCTCACGTTGCCCGCCAGGCGCTGGTGGTGGTGTaGGTGGTGGTGGTGATGGTGGTGGTGATGATGGTGAGGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: CETTAHVARQALVVV*VVVVMVVVMMVREL Trigger: AAGTTCCCTCACCATCATCACCACCACCATCACCACCACCACCCACACCACCACCAGCGCCTGGCGGGCAACGTGAGCGGTAGTTTCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CAA 90 bp | GGTCTTGCCCCGCTGAAGTATGTGTCTCTGAACAAAGTCAGAATGCAGGTGAGCCCGGTCACCGAAGGGTaGGGCTCTCGGGCTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLAPLKYVSLNKVRMQVSPVTEG*GSRAVP Trigger: GGGCACAGCCCGAGAGCCCAACCCTTCGGTGACCGG...GCTCACCTGCATTCTGACTTTGTTCAGAGACACATACTTCAGCGGGGCAAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS GCA 90 bp | GTATTGATCTCTTCCATCTGCCCTGAATTACTTCCATTGCTGACCTaGGCGCCGGTCACCGAAGGGTTGGGCTCTCGGGCTGTGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLISSICPELLPLLT*APVTEGLGSRAVPR Trigger: CCTGGGCACAGCCCGAGAGCCCAACCCTTCGGTGACCGGCGCGCAGGTCAGCAATGGAAGTAATTCAGGGCAGATGGAAGAGATCAATAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CAA 90 bp | AGCGGCATTTATGGGTCCCACATGCATGGTGTCAGACTCTCTGTCATGATGGTAGATGAACTGCCTGAGTaGGAGCCGCCCTCGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGIYGSHMHGVRLSVMMVDELPE*EPPSSC Trigger: GCAGGACGAGGGCGGCTCCAACTCAGGCAGTTCATC...TACCATCATGACAGAGAGTCTGACACCATGCATGTGGGACCCATAAATGCCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CAA 90 bp | ACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATGCTTATGCGGAGGAAGGCCGTaGATGGGTACCATGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TRFIDSKKDCDLLWRRCLCGGRP*MGTMPA Trigger: GGCCGGCATGGTACCCATCAACGGCCTTCCTCCGCA...TAAGCATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CAA 90 bp | GTTGTGGGCCTGGCAGGTTCAAACGCTAGGCTAGATGAGAGAAATCACATCTCAGTCTCCCGACCCGACTaGAGTTTGCTCCAGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VVGLAGSNARLDERNHISVSRPD*SLLQGL Trigger: CAAGCCCTGGAGCAAACTCAAGTCGGGTCGGGAGAC...TGAGATGTGATTTCTCTCATCTAGCCTAGCGTTTGAACCTGCCAGGCCCACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CAA 90 bp | ACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATGCTTATTTGGGGTGAGCATCTaGTCGGTGGGCATAGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: TRFIDSKKDCDLLWRRCLFGVSI*SVGIAA Trigger: CGCGGCTATGCCCACCGACAAGATGCTCACCCCAAA...TAAGCATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CAA 90 bp | ACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATGCTTACCTGAATTACTTCCATaGCTGACCTGCGCGCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TRFIDSKKDCDLLWRRCLPELLP*LTCAPV Trigger: GACCGGCGCGCAGGTCAGCAATGGAAGTAATTCAGG...TAAGCATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CAA 90 bp | AAATTACCAGGTTCATTGATAGCAAGAAGGACTGTGACTTGCTTTGGAGGCGATCGACCCGACTTGAGTTaGCTCCAGGGCTTGGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KLPGSLIARRTVTCFGGDRPDLS*LQGLGF Trigger: AAACCCCAAGCCCTGGAGCAAACTCAAGTCGGGTCG...ATCGCCTCCAAAGCAAGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CAA 90 bp | CAGTGCAGAACTTACTATCAATATTGCTTTTGGTGTTATCTTTCTATTGAGGTGAAACTACCGCTCACGTaGCCCGCCAGGCGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QCRTYYQYCFWCYLSIEVKLPLT*PARRWW Trigger: CCACCAGCGCCTGGCGGGCAACGTGAGCGGTAGTTT...CACCTCAATAGAAAGATAACACCAAAAGCAATATTGATAGTAAGTTCTGCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CAA 90 bp | AGAAACCATGTGGTAAAATTACCAGGTTCATTGATAGCAAGAAGGACTGTGACTGGCTTTTTGGGGGTGTaGCCTCTGTCCTTCCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RNHVVKLPGSLIARRTVTGFLGV*PLSFPC Trigger: ACACGGGAAGGACAGAGGCAACACCCCCAAAAAGCC...AGTCACAGTCCTTCTTGCTATCAATGAACCTGGTAATTTTACCACATGGTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CAA 90 bp | TGGCTCTTCATGATAGAACTGGAATTGTGCCATATTCCGAAGGAAAACTTTTTAACCAGCCTGGGCTTTTaGGGGGTGTTGCCTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WLFMIELELCHIPKENFLTSLGF*GVLPLS Trigger: GGACAGAGGCAACACCCCCAAAAAGCCCAGGCTGGT...TAAAAAGTTTTCCTTCGGAATATGGCACAATTCCAGTTCTATCATGAAGAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CAA 90 bp | AAATTTTTGATTAGGAAGCTTGGGACTCATTTCTATCCTAGCCCTGTCAGAGAGATAGTGGGGAAGTCCTaGCTGGGAGTTGTGAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: KFLIRKLGTHFYPSPVREIVGKS*LGVVNA Trigger: AGCATTCACAACTCCCAGCAAGGACTTCCCCACTAT...CTCTCTGACAGGGCTAGGATAGAAATGAGTCCCAAGCTTCCTAATCAAAAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CAA 90 bp | TGGCTCTTCATGATAGAACTGGAATTGTGCCATATTCCGAAGGAAAACTTTTTAGTGATTTGTAATTCTTaGGACGGACGCTTATTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WLFMIELELCHIPKENFLVICNS*DGRLFS Trigger: GGAAAATAAGCGTCCGTCCAAAGAATTACAAATCAC...TAAAAAGTTTTCCTTCGGAATATGGCACAATTCCAGTTCTATCATGAAGAGCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS-3UTR CAA 90 bp | CAGTGCAGAACTTACTATCAATATTGCTTTTGGTGTTATCTTTCTATTGAGGTGGGACGCTTATTTTCCTaGAATATTGCATGTAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QCRTYYQYCFWCYLSIEVGRLFS*NIACRV Trigger: AACTCTACATGCAATATTCAAGGAAAATAAGCGTCC...CACCTCAATAGAAAGATAACACCAAAAGCAATATTGATAGTAAGTTCTGCACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS TCA 72 bp | AGGTGGCTGCCGCGGTGTCCCACGGAGCTGCGCGCGTaGGGGCTGCCGCCCAGCAGGTCAGCAGGGGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RWLPRCPTELRA*GLPPSRSAGAG Trigger: GCCCGCCCCTGCTGACCTGCTGGGCGGCAGCCCTCACGCGCGCAGCTCCGTGGGACACCGCGGCAGCCACCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS GCA 72 bp | TGCCGCGGTGTCCCACGGAGCTGCGCGCGTGAGGGCTaGCGCCCAGCAGGTCAGCAGGGGCGGGCACCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CRGVPRSCAREG*RPAGQQGRAPA Trigger: AGCCGGTGCCCGCCCCTGCTGACCTGCTGGGCGGCAGCCCTCACGCGCGCAGCTCCGTGGGACACCGCGGCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS GCA 72 bp | TGCCCATGGAACGCGGGTGCGCGGGAGGCAGGTGGCTaGCGCGGTGTCCCACGGAGCTGCGCGCGTGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CPWNAGAREAGG*RGVPRSCAREG Trigger: GCCCTCACGCGCGCAGCTCCGTGGGACACCGCGGCAGCCACCTGCCTCCCGCGCACCCGCGTTCCATGGGCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS GCA 72 bp | CGCTGCCTCCGCTGCCGCCGTCCAGCAGGGACGCCATaGCCATGGAACGCGGGTGCGCGGGAGGCAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RCLRCRRPAGTP*PWNAGAREAGG Trigger: GCCACCTGCCTCCCGCGCACCCGCGTTCCATGGGCATGGCGTCCCTGCTGGACGGCGGCAGCGGAGGCAGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS GCA 72 bp | CCGTCCAGCAGGGACGCCATGCCCATGGAACGCGGGTaGGCGGGAGGCAGGTGGCTGCCGCGGTGTCCCACG | + |
|
Preference number: 6 (lower is better) Translates to: PSSRDAMPMERG*AGGRWLPRCPT Trigger: CGTGGGACACCGCGGCAGCCACCTGCCTCCCGCGCACCCGCGTTCCATGGGCATGGCGTCCCTGCTGGACGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CCA 72 bp | CCGCCCAGCAGGTCAGCAGGGGCGGGCACCGGCTCATaGCTCACCCCGTGCAGCTCGCCGATCGCCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: PPSRSAGAGTGS*LTPCSSPIASM Trigger: CATGGAGGCGATCGGCGAGCTGCACGGGGTGAGCCATGAGCCGGTGCCCGCCCCTGCTGACCTGCTGGGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS GCA 72 bp | TCAGCAGGGGCGGGCACCGGCTCATGGCTCACCCCGTaGAGCTCGCCGATCGCCTCCATGGTCAGCTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: SAGAGTGSWLTP*SSPIASMVSCA Trigger: CGCACAGCTGACCATGGAGGCGATCGGCGAGCTGCACGGGGTGAGCCATGAGCCGGTGCCCGCCCCTGCTGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS GCA 72 bp | GGGCGCGGTGGTGGTGGTGGTAATCGCTGCCTCCGCTaGCGCCGTCCAGCAGGGACGCCATGCCCATGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GRGGGGGNRCLR*RRPAGTPCPWN Trigger: GTTCCATGGGCATGGCGTCCCTGCTGGACGGCGGCAGCGGAGGCAGCGATTACCACCACCACCACCGCGCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS GCA 72 bp | TGTGCTCAGGGGCGCGGTGGTGGTGGTGGTAATCGCTaGCTCCGCTGCCGCCGTCCAGCAGGGACGCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: CAQGRGGGGGNR*LRCRRPAGTPC Trigger: GCATGGCGTCCCTGCTGGACGGCGGCAGCGGAGGCAGCGATTACCACCACCACCACCGCGCCCCTGAGCACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CCA 72 bp | ATGCCGGCCGAGGTGGGCGTGAGGTGCTGCTCCCCGTaGCGACCGAGCATGGCAGGGTGGTGGGCTTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: MPAEVGVRCCSP*RPSMAGWWASK Trigger: CTTTGAAGCCCACCACCCTGCCATGCTCGGTCGCCACGGGGAGCAGCACCTCACGCCCACCTCGGCCGGCAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CAA 72 bp | CTTCCATTGCTGACCTGCGCGCCGGTCACCGAAGGGTaGGGCTCTCGGGCTGTGCCCAGGAGCTGTCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPLLTCAPVTEG*GSRAVPRSCPW Trigger: CCACGGACAGCTCCTGGGCACAGCCCGAGAGCCCAACCCTTCGGTGACCGGCGCGCAGGTCAGCAATGGAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CCA 72 bp | ACCGCTCACGTTGCCCGCCAGGCGCTGGTGGTGGTGTaGGTGGTGGTGGTGATGGTGGTGGTGATGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TAHVARQALVVV*VVVVMVVVMMV Trigger: CACCATCATCACCACCACCATCACCACCACCACCCACACCACCACCAGCGCCTGGCGGGCAACGTGAGCGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CAA 90 bp | GTCGGTGGGCATAGCCGCGCCGGGATGAGCATAGTGGGGAAGTCCTaGCTGGGAGTTGTGAATGCTGCCCAGACCGGAGCCAGAGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VGGHSRAGMSIVGKS*LGVVNAAQTGAREG Trigger: CCCCTCTCTGGCTCCGGTCTGGGCAGCATTCACAACTCCCAGCAAGGACTTCCCCACTATGCTCATCCCGGCGCGGCTATGCCCACCGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS TCA 72 bp | AGGAGCTGTCCGTGGCCCTGGGCATTCAGGTGGGCATaGGGATGGTGCGGAGGAAGGCCGTTGATGGGTACC | + |
|
Preference number: 6 (lower is better) Translates to: RSCPWPWAFRWA*GWCGGRPLMGT Trigger: GGTACCCATCAACGGCCTTCCTCCGCACCATCCTCATGCCCACCTGAATGCCCAGGGCCACGGACAGCTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CAA 72 bp | CGCTCATCCCGCATAAGTGTGAAACTACCGCTCACGTaGCCCGCCAGGCGCTGGTGGTGGTGTGGGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSSRISVKLPLT*PARRWWWCGWW Trigger: CCACCACCCACACCACCACCAGCGCCTGGCGGGCAACGTGAGCGGTAGTTTCACACTTATGCGGGATGAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS GCA 72 bp | GAGCATAGTGGGGAAGTCCTTGCTGGGAGTTGTGAATaGTGCCCAGACCGGAGCCAGAGAGGGGCGAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EHSGEVLAGSCE*CPDRSQRGARG Trigger: GCCTCTCGCCCCTCTCTGGCTCCGGTCTGGGCAGCATTCACAACTCCCAGCAAGGACTTCCCCACTATGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CCA 72 bp | ACCGAGCATGGCAGGGTGGTGGGCTTCAAAGCCATTTaGGGTGAGCATCTTGTCGGTGGGCATAGCCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: TEHGRVVGFKAI*GEHLVGGHSRA Trigger: GGCGCGGCTATGCCCACCGACAAGATGCTCACCCCAAATGGCTTTGAAGCCCACCACCCTGCCATGCTCGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CCA 72 bp | TGCTGCTCCCCGTGGCGACCGAGCATGGCAGGGTGGTaGGCTTCAAAGCCATTTGGGGTGAGCATCTTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: CCSPWRPSMAGW*ASKPFGVSILS Trigger: CGACAAGATGCTCACCCCAAATGGCTTTGAAGCCCACCACCCTGCCATGCTCGGTCGCCACGGGGAGCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CCA 72 bp | AGGTGCTGCTCCCCGTGGCGACCGAGCATGGCAGGGTaGTGGGCTTCAAAGCCATTTGGGGTGAGCATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RCCSPWRPSMAG*WASKPFGVSIL Trigger: CAAGATGCTCACCCCAAATGGCTTTGAAGCCCACCACCCTGCCATGCTCGGTCGCCACGGGGAGCAGCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CAA 72 bp | CATAGCCGCGCCGGGATGAGCATAGTGGGGAAGTCCTaGCTGGGAGTTGTGAATGCTGCCCAGACCGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: HSRAGMSIVGKS*LGVVNAAQTGA Trigger: GGCTCCGGTCTGGGCAGCATTCACAACTCCCAGCAAGGACTTCCCCACTATGCTCATCCCGGCGCGGCTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS GCA 72 bp | CATAGTGGGGAAGTCCTTGCTGGGAGTTGTGAATGCTaGCCAGACCGGAGCCAGAGAGGGGCGAGAGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HSGEVLAGSCEC*PDRSQRGARGS Trigger: AGAGCCTCTCGCCCCTCTCTGGCTCCGGTCTGGGCAGCATTCACAACTCCCAGCAAGGACTTCCCCACTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CAA 72 bp | GTACAAGTGCTCGATGAGGACGATGAACTGCCTGAGTaGGAGCCGCCCTCGTCCTGCCACTTGTCCAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: VQVLDEDDELPE*EPPSSCHLSRL Trigger: GAGTCTGGACAAGTGGCAGGACGAGGGCGGCTCCAACTCAGGCAGTTCATCGTCCTCATCGAGCACTTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CAA 72 bp | GTATTGATCTCTTCCATCTGCCCTGAATTACTTCCATaGCTGACCTGCGCGCCGGTCACCGAAGGGTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VLISSICPELLP*LTCAPVTEGLG Trigger: GCCCAACCCTTCGGTGACCGGCGCGCAGGTCAGCAATGGAAGTAATTCAGGGCAGATGGAAGAGATCAATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CCA 72 bp | TTATTTTCCTTGAATATTGCATGTAGAGTTCGACGTTaGACGTCTGTGAAGACCAGCCTGGGCTTTTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LFSLNIACRVRR*TSVKTSLGFLG Trigger: CCCCAAAAAGCCCAGGCTGGTCTTCACAGACGTCCAACGTCGAACTCTACATGCAATATTCAAGGAAAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CAA 90 bp | TGGGAGATGGTGATTTGTAATTCTTTGGACGGACGCTTATTTTCCTaGAATATTGCATGTAGAGTTCGACGTTGGACGTCTGTGAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: WEMVICNSLDGRLFS*NIACRVRRWTSVKT Trigger: GGTCTTCACAGACGTCCAACGTCGAACTCTACATGCAATATTCAAGGAAAATAAGCGTCCGTCCAAAGAATTACAAATCACCATCTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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| CDS CAA 72 bp | GTGATTTGTAATTCTTTGGACGGACGCTTATTTTCCTaGAATATTGCATGTAGAGTTCGACGTTGGACGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VICNSLDGRLFS*NIACRVRRWTS Trigger: AGACGTCCAACGTCGAACTCTACATGCAATATTCAAGGAAAATAAGCGTCCGTCCAAAGAATTACAAATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056006.11 |
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