RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OMT2B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038750

Ensembl transcript IDs: ENSMUST00000043734.12, ENSMUST00000186336.2, ENSMUST00000187667.7, ENSMUST00000189243.2

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp TCATGGTCAAGCCGGCTTCTCCACAGGCAAGGCTGTTCCAAGGTTAACATTATGCACCACACAGGGCTTTaGAGGCCTCTGGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SWSSRLLHRQGCSKVNIMHHTGL*RPLAQA
Trigger: AGCCTGGGCCAGAGGCCTGCAAAGCCCTGTGTGGTG...CATAATGTTAACCTTGGAACAGCCTTGCCTGTGGAGAAGCCGGCTTGACCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
CDS-3UTR CCA 90 bp TCATGGTCAAGCCGGCTTCTCCACAGGCAAGGCTGTTCCAAGGTTAACATTATGCTCTGGCCCAGGCTCTaGCTCGATTTCGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: SWSSRLLHRQGCSKVNIMLWPRL*LDFAWS
Trigger: GGACCAAGCGAAATCGAGCCAGAGCCTGGGCCAGAG...CATAATGTTAACCTTGGAACAGCCTTGCCTGTGGAGAAGCCGGCTTGACCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
CDS-3UTR CCA 90 bp GGCTTCTCCACAGGCAAGGCTGTTCCAAGGTTAACATTATGGCAAAGGACATCTGGCTTTGCAGGCCTCTaGCCCAGGCTCTGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: GFSTGKAVPRLTLWQRTSGFAGL*PRLWLD
Trigger: ATCGAGCCAGAGCCTGGGCCAGAGGCCTGCAAAGCC...AGATGTCCTTTGCCATAATGTTAACCTTGGAACAGCCTTGCCTGTGGAGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
CDS-3UTR CCA 90 bp TCCACAGGCAAGGCTGTTCCAAGGTTAACATTATGGCAAAGGACATCTGAACAACTCTGGCCCAGGCTCTaGCTCGATTTCGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: STGKAVPRLTLWQRTSEQLWPRL*LDFAWS
Trigger: GGACCAAGCGAAATCGAGCCAGAGCCTGGGCCAGAG...TTGTTCAGATGTCCTTTGCCATAATGTTAACCTTGGAACAGCCTTGCCTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
CDS-3UTR CCA 90 bp TCATGGTCAAGCCGGCTTCTCCACAGGCAAGGCTGTTCCAAGGTTAACATTATGGGGGTCCAGGAAAGATaGAAGGTGATGTTGCATCTC +
Preference number: 4 (lower is better)
Translates to: SWSSRLLHRQGCSKVNIMGVQER*KVMLHL
Trigger: GAGATGCAACATCACCTTCCATCTTTCCTGGACCCC...CATAATGTTAACCTTGGAACAGCCTTGCCTGTGGAGAAGCCGGCTTGACCATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
CDS-3UTR CCA 90 bp TCCACAGGCAAGGCTGTTCCAAGGTTAACATTATGGCAAAGGACATCTGAACAAGGGGTCCAGGAAAGATaGAAGGTGATGTTGCATCTC +
Preference number: 4 (lower is better)
Translates to: STGKAVPRLTLWQRTSEQGVQER*KVMLHL
Trigger: GAGATGCAACATCACCTTCCATCTTTCCTGGACCCC...TTGTTCAGATGTCCTTTGCCATAATGTTAACCTTGGAACAGCCTTGCCTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
CDS-3UTR GCA 90 bp TCATGGTCAAGCCGGCTTCTCCACAGGCAAGGCTGTTCCAAGGTTAACATTATGCACAATCACAAACATTaGAAAGATCCTAATCCCTTT +
Preference number: 4 (lower is better)
Translates to: SWSSRLLHRQGCSKVNIMHNHKH*KDPNPF
Trigger: AAAGGGATTAGGATCTTTGCAATGTTTGTGATTGTG...CATAATGTTAACCTTGGAACAGCCTTGCCTGTGGAGAAGCCGGCTTGACCATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
CDS-3UTR GCA 90 bp TCCACAGGCAAGGCTGTTCCAAGGTTAACATTATGGCAAAGGACATCTGAACAACACAATCACAAACATTaGAAAGATCCTAATCCCTTT +
Preference number: 4 (lower is better)
Translates to: STGKAVPRLTLWQRTSEQHNHKH*KDPNPF
Trigger: AAAGGGATTAGGATCTTTGCAATGTTTGTGATTGTG...TTGTTCAGATGTCCTTTGCCATAATGTTAACCTTGGAACAGCCTTGCCTGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
ENSMUST00000189243.2
CDS-3UTR CAA 90 bp TCATGGTCAAGCCGGCTTCTCCACAGGCAAGGCTGTTCCAAGGTTAACATTATGCCACCACACAGGGCTTaGCAGGCCTCTGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: SWSSRLLHRQGCSKVNIMPPHRA*QASGPG
Trigger: GCCTGGGCCAGAGGCCTGCAAAGCCCTGTGTGGTGG...CATAATGTTAACCTTGGAACAGCCTTGCCTGTGGAGAAGCCGGCTTGACCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
CDS-3UTR CAA 90 bp GGCTTCTCCACAGGCAAGGCTGTTCCAAGGTTAACATTATGGCAAAGGACATCTCCACCACACAGGGCTTaGCAGGCCTCTGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: GFSTGKAVPRLTLWQRTSPPHRA*QASGPG
Trigger: GCCTGGGCCAGAGGCCTGCAAAGCCCTGTGTGGTGG...AGATGTCCTTTGCCATAATGTTAACCTTGGAACAGCCTTGCCTGTGGAGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
CDS CCA 90 bp CAGGGCTTTGCAGGCCTCTGGCCCAGGCTCTGGCTCGATTTCGCTTaGTCCGGAGATTGCAAGCTAGCGACACAATCACAAACATTGCAA +
Preference number: 5 (lower is better)
Translates to: QGFAGLWPRLWLDFA*SGDCKLATQSQTLQ
Trigger: TTGCAATGTTTGTGATTGTGTCGCTAGCTTGCAATCTCCGGACCAAGCGAAATCGAGCCAGAGCCTGGGCCAGAGGCCTGCAAAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
CDS-3UTR CAA 90 bp TCATGGTCAAGCCGGCTTCTCCACAGGCAAGGCTGTTCCAAGGTTAACATTATGAGATGGAAGGTGATGTaGCATCTCACAAACAGGGCC +
Preference number: 5 (lower is better)
Translates to: SWSSRLLHRQGCSKVNIMRWKVM*HLTNRA
Trigger: GGCCCTGTTTGTGAGATGCAACATCACCTTCCATCT...CATAATGTTAACCTTGGAACAGCCTTGCCTGTGGAGAAGCCGGCTTGACCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
CDS GCA 90 bp TACAGGACTGTTTCACTTAAATCACCATCAGATGTAATAAGAACGTaGATATTCAAAAAGTATAGCAATAGTTCCGGCCTCAAATCAAAC +
Preference number: 5 (lower is better)
Translates to: YRTVSLKSPSDVIRT*IFKKYSNSSGLKSN
Trigger: GTTTGATTTGAGGCCGGAACTATTGCTATACTTTTTGAATATGCACGTTCTTATTACATCTGATGGTGATTTAAGTGAAACAGTCCTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
ENSMUST00000189243.2
CDS CAA 72 bp TGCAGGCCTCTGGCCCAGGCTCTGGCTCGATTTCGCTaGGTCCGGAGATTGCAAGCTAGCGACACAATCACA +
Preference number: 6 (lower is better)
Translates to: CRPLAQALARFR*VRRLQASDTIT
Trigger: TGTGATTGTGTCGCTAGCTTGCAATCTCCGGACCAAGCGAAATCGAGCCAGAGCCTGGGCCAGAGGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
CDS CAA 72 bp TTAAATGAAGTACCTCCGGTTCCACCACACAGGGCTTaGCAGGCCTCTGGCCCAGGCTCTGGCTCGATTTCG +
Preference number: 6 (lower is better)
Translates to: LNEVPPVPPHRA*QASGPGSGSIS
Trigger: CGAAATCGAGCCAGAGCCTGGGCCAGAGGCCTGCAAAGCCCTGTGTGGTGGAACCGGAGGTACTTCATTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
CDS CAA 90 bp AGGCCTCTGGCCCAGGCTCTGGCTCGATTTCGCTTGGTCCGGAGATaGCAAGCTAGCGACACAATCACAAACATTGCAAAGATCCTAATC +
Preference number: 6 (lower is better)
Translates to: RPLAQALARFRLVRR*QASDTITNIAKILI
Trigger: GATTAGGATCTTTGCAATGTTTGTGATTGTGTCGCTAGCTTGCAATCTCCGGACCAAGCGAAATCGAGCCAGAGCCTGGGCCAGAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043734.12
ENSMUST00000187667.7
CDS CCA 72 bp GTACACAATCACAAACTCCAGGGGGTCCAGGAAAGATaGAAGGTGATGTTGCATCTCACAAACAGGGCCATA +
Preference number: 6 (lower is better)
Translates to: VHNHKLQGVQER*KVMLHLTNRAI
Trigger: TATGGCCCTGTTTGTGAGATGCAACATCACCTTCCATCTTTCCTGGACCCCCTGGAGTTTGTGATTGTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043734.12
ENSMUST00000186336.2
ENSMUST00000187667.7